AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00001

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00001.t1 MTR_2g014490 97.667 1586 35 2 1 1585 86 1670 0.0 3206
MS.gene00001.t1 MTR_2g014490 96.994 1597 35 2 1 1585 86 1681 0.0 3202
MS.gene00001.t1 MTR_4g088375 68.008 1591 437 21 1 1583 77 1603 0.0 1887
MS.gene00001.t1 MTR_4g088375 66.750 1591 423 21 1 1583 77 1569 0.0 1831
MS.gene00001.t1 MTR_4g088375 66.750 1591 422 22 1 1583 77 1568 0.0 1825
MS.gene00001.t1 MTR_4g088375 68.728 1407 380 15 180 1583 1 1350 0.0 1699
MS.gene00001.t1 MTR_4g078860 46.433 1598 743 35 1 1536 65 1611 0.0 1220
MS.gene00001.t1 MTR_4g078860 48.772 1466 668 28 1 1421 65 1492 0.0 1211
MS.gene00001.t1 MTR_4g078860 45.995 1598 724 34 1 1536 65 1585 0.0 1210
MS.gene00001.t1 MTR_4g078860 49.192 1362 609 28 1 1317 65 1388 0.0 1123
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00001.t1 AT1G28420 49.554 1570 643 31 1 1535 85 1540 0.0 1225
MS.gene00001.t1 AT5G44180 48.562 1460 629 30 1 1434 63 1426 0.0 1204
MS.gene00001.t1 AT5G44180 48.562 1460 629 30 1 1434 63 1426 0.0 1204
MS.gene00001.t1 AT5G44180 50.713 1122 471 23 1 1105 63 1119 0.0 969
MS.gene00001.t1 AT5G44180 46.565 131 66 1 1304 1434 1113 1239 5.05e-26 117
MS.gene00001.t1 AT4G12750 30.518 367 195 6 387 735 236 560 1.39e-34 145
MS.gene00001.t1 AT4G12750 27.224 371 233 12 1051 1412 747 1089 3.45e-28 124

Find 404 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGGAAGATGGACCTATTT+TGG 0.114913 2.4:+70329004 MS.gene00001:CDS
CTGAAGCATTTGGAACAATT+TGG 0.130085 2.4:+70334954 MS.gene00001:CDS
GGTAAATGTAAAAGAAAATT+TGG 0.144383 2.4:+70332987 MS.gene00001:CDS
TGCAAAACCTTGAATCATTT+AGG 0.150535 2.4:+70331033 MS.gene00001:CDS
TATCGTATTGTACTGAATTT+TGG 0.166943 2.4:-70332948 None:intergenic
TATGGATCCGGGTCAGGTTC+TGG 0.197086 2.4:+70328852 MS.gene00001:CDS
CCTCCATTGGATCGTATAAA+TGG 0.204294 2.4:-70329886 None:intergenic
AAAATCCAGATATTTGAAAA+TGG 0.211386 2.4:+70332814 MS.gene00001:CDS
TGGAATATGATCATGGAAAT+TGG 0.222823 2.4:+70336086 MS.gene00001:CDS
CATATTATCATCAAGATTTC+CGG 0.228504 2.4:-70333142 None:intergenic
GCTAACTGTCGCAAAATTTC+AGG 0.237197 2.4:-70332048 None:intergenic
TAATTTATCCAAAGATATTA+TGG 0.253062 2.4:+70334730 MS.gene00001:CDS
TCAAACTCAATTCCCAAAAT+AGG 0.262702 2.4:-70329017 None:intergenic
GCAGGCCTTTGATATTCTTT+TGG 0.263756 2.4:+70334190 MS.gene00001:intron
CGGAAATCTTGATGATAATA+TGG 0.268511 2.4:+70333143 MS.gene00001:CDS
GCAAAACCTTGAATCATTTA+GGG 0.269120 2.4:+70331034 MS.gene00001:CDS
TTCAGTACAATACGATAATA+TGG 0.270327 2.4:+70332954 MS.gene00001:CDS
GTGCAGAAGGAGTTCCTCTT+TGG 0.283082 2.4:-70333626 None:intergenic
CCCGCAAGACCGTGTCATTA+TGG 0.284189 2.4:-70330225 None:intergenic
CTTTGAGTTCCATGAATTCT+AGG 0.284781 2.4:-70329953 None:intergenic
GCGAAAGGCGCCACCTTTGC+TGG 0.285441 2.4:+70328776 MS.gene00001:CDS
ACAAATTCATCAAGAGTAAA+AGG 0.289180 2.4:-70331587 None:intergenic
TTTCTTCATCCTTATTTCAT+AGG 0.291487 2.4:-70330414 None:intergenic
AAAGGGAGGAGGGGAAGTAT+AGG 0.295610 2.4:-70330026 None:intergenic
CATTGCCACCTGATGCATTT+GGG 0.298482 2.4:+70329042 MS.gene00001:CDS
GCTGCAAATTTAACTGTTCC+TGG 0.298642 2.4:-70332475 None:intergenic
CGATAATATGGATATTAGTT+TGG 0.298752 2.4:+70332966 MS.gene00001:CDS
CTGGAGCCTTGTAATGAATA+TGG 0.303206 2.4:+70328834 MS.gene00001:CDS
TTCGGAACAAACGGATATTC+AGG 0.304623 2.4:-70329818 None:intergenic
CCAGTGCCCGAGTGCCATTC+AGG 0.304676 2.4:+70334371 MS.gene00001:CDS
CTCAAGCTTTACGTAGTTGA+TGG 0.310459 2.4:-70335375 None:intergenic
CAATGGTTCTCTTCCACCCT+TGG 0.311820 2.4:-70335916 None:intergenic
GTTGCTTCTTTCTCCTCAAC+AGG 0.312467 2.4:-70335407 None:intergenic
ATCCGTGGAGGAACTGTTAC+AGG 0.312777 2.4:+70335024 MS.gene00001:CDS
GGGGCTTTGACATACGAAAT+TGG 0.313114 2.4:+70331998 MS.gene00001:CDS
CTCTAGTACATTCAAACCTT+TGG 0.314270 2.4:-70332524 None:intergenic
CCATTGCCACCTGATGCATT+TGG 0.314663 2.4:+70329041 MS.gene00001:CDS
GGAAGTAGAGCAACTGATTC+AGG 0.317857 2.4:-70335296 None:intergenic
CTTGTTAGAAATCTGGTCTT+CGG 0.321633 2.4:+70332632 MS.gene00001:intron
GCCTAATCCTAAGTTGATTC+TGG 0.321806 2.4:+70328815 MS.gene00001:CDS
CCATAATGACACGGTCTTGC+GGG 0.321838 2.4:+70330225 MS.gene00001:CDS
CAATTTGGTGATCAGTGAAT+TGG 0.322334 2.4:-70330159 None:intergenic
ATGCCAGTATTGGCTACGTT+TGG 0.327923 2.4:-70330130 None:intergenic
TTAGATTTCCCATCACTTGC+TGG 0.328353 2.4:+70333489 MS.gene00001:CDS
TTAGCACTATCTGCAGGATT+TGG 0.331449 2.4:+70332066 MS.gene00001:CDS
CACTGGATTCACGCGGGATC+AGG 0.331686 2.4:+70334216 MS.gene00001:CDS
TCTAGTACATTCAAACCTTT+GGG 0.336654 2.4:-70332523 None:intergenic
CAATTCACTGATCACCAAAT+TGG 0.337621 2.4:+70330160 MS.gene00001:CDS
CTTTCTTGCTTCTGAAAGAA+TGG 0.337761 2.4:-70332791 None:intergenic
TGATGCTTCAGGTGTCTTGC+TGG 0.339404 2.4:-70332665 None:intergenic
GAGTTGTCCGGACCTGTGCC+TGG 0.340287 2.4:-70333693 None:intergenic
AAGGGAGGAGGGGAAGTATA+GGG 0.340484 2.4:-70330025 None:intergenic
AGAATGCTCCATAATATCTT+TGG 0.340896 2.4:-70334738 None:intergenic
GTTTGGGTGAGGTTCCCTTT+TGG 0.343559 2.4:-70330113 None:intergenic
TGGGAGTCTTCCATAAAATA+AGG 0.346133 2.4:-70334632 None:intergenic
CTTGTCCTGCTGAGACAAAA+AGG 0.347365 2.4:-70330044 None:intergenic
GGATGAACAGTTAGAATTGA+TGG 0.347580 2.4:+70330953 MS.gene00001:CDS
ATCGGTTACGCCTGCGGTCC+TGG 0.348401 2.4:-70333824 None:intergenic
CAGGATTAGCAGCTCCATTC+TGG 0.350464 2.4:-70331837 None:intergenic
TTTACTAAATCATCGTCTTC+AGG 0.352624 2.4:-70332910 None:intergenic
GCAAAGTATCAAGATCAATA+TGG 0.353463 2.4:-70331013 None:intergenic
ACATGAAGTTAGAACGAATA+AGG 0.359766 2.4:+70329628 MS.gene00001:CDS
GTAAATGTAAAAGAAAATTT+GGG 0.361916 2.4:+70332988 MS.gene00001:CDS
CATCATTTGACGGAAATGTT+TGG 0.362870 2.4:-70334670 None:intergenic
TCTAGTAATGATCCTGGTTC+TGG 0.366872 2.4:+70333870 MS.gene00001:CDS
TCTGTTCTCTCTGAAGCATT+TGG 0.367912 2.4:+70334944 MS.gene00001:CDS
GAACATCTACCTAGAATTCA+TGG 0.369626 2.4:+70329944 MS.gene00001:CDS
ACCGCAGGCGTAACCGATAT+TGG 0.370287 2.4:+70333829 MS.gene00001:CDS
CAGGTGTCTTGCTGGTTGTC+AGG 0.370707 2.4:-70332657 None:intergenic
GCTTGTGTGGAGGCACAGTT+AGG 0.371831 2.4:+70328972 MS.gene00001:CDS
AGCATTAGATCTGATATGTT+TGG 0.372492 2.4:+70329848 MS.gene00001:CDS
TTGCTGATGCTCTTGAGTTA+TGG 0.383282 2.4:+70331564 MS.gene00001:CDS
TCGACGGCCAGTATCTTGTT+TGG 0.385999 2.4:-70335730 None:intergenic
TACTGGCCGTCGAAACATTA+AGG 0.387222 2.4:+70335740 MS.gene00001:CDS
CTATGACTCCTGTTCACATT+GGG 0.387260 2.4:+70335979 MS.gene00001:CDS
TTCAACTTCCTTGGCAACTC+TGG 0.388626 2.4:-70330390 None:intergenic
GACAATGCTGCAGTGGTTAG+AGG 0.390080 2.4:-70335326 None:intergenic
TACGCCTGCGGTCCTGGCCA+AGG 0.390990 2.4:-70333818 None:intergenic
AATCAGTTGCTCTACTTCCA+TGG 0.391552 2.4:+70335300 MS.gene00001:CDS
AAACTCTCTGTTAGGCTTGA+AGG 0.392296 2.4:-70335568 None:intergenic
GCCTTTCGCACCTTCTTAAC+CGG 0.392579 2.4:-70328762 None:intergenic
CACCCAAACGTAGCCAATAC+TGG 0.393589 2.4:+70330127 MS.gene00001:CDS
AAGTTGAAGCCTATGAAATA+AGG 0.393643 2.4:+70330405 MS.gene00001:CDS
CAAGCCTAACAGAGAGTTTG+AGG 0.394957 2.4:+70335572 MS.gene00001:CDS
GTCTAGCCCGTTTGCCCGGA+TGG 0.396277 2.4:+70328875 MS.gene00001:CDS
ATGGATCCGGGTCAGGTTCT+GGG 0.396969 2.4:+70328853 MS.gene00001:CDS
TTGTTAGAAATCTGGTCTTC+GGG 0.400044 2.4:+70332633 MS.gene00001:intron
CCACTGCAGCATTGTCTCTC+AGG 0.400453 2.4:+70335333 MS.gene00001:CDS
TGCCAGTATTGGCTACGTTT+GGG 0.402993 2.4:-70330129 None:intergenic
TGCATGCACAATATTCAAAA+AGG 0.403309 2.4:+70333727 MS.gene00001:CDS
CTCAACTCCATCCGGGCAAA+CGG 0.403462 2.4:-70328882 None:intergenic
AGAGCTTGCAGAGAAGATTC+AGG 0.403864 2.4:+70332543 MS.gene00001:CDS
TACCCCTTGGCCAGGACCGC+AGG 0.404528 2.4:+70333814 MS.gene00001:CDS
TTCATAGGCTTCAACTTCCT+TGG 0.404823 2.4:-70330399 None:intergenic
TCTGAGGACAAGATTGCTTA+AGG 0.408514 2.4:+70334766 MS.gene00001:CDS
CACAGTTAGGGGAGCCTTTG+AGG 0.409127 2.4:+70328985 MS.gene00001:CDS
GATCATGGAAATTGGGAGAT+AGG 0.409401 2.4:+70336094 MS.gene00001:CDS
TACAATTCCAAACAAGATAC+TGG 0.409805 2.4:+70335723 MS.gene00001:CDS
GCAACAGAAATTGATGCTTC+AGG 0.411135 2.4:-70332676 None:intergenic
CTCCATTGGATCGTATAAAT+GGG 0.412703 2.4:-70329885 None:intergenic
AAATCCAGATATTTGAAAAT+GGG 0.416183 2.4:+70332815 MS.gene00001:CDS
ATAACAGGATTCAAGATTGT+TGG 0.421418 2.4:+70331729 MS.gene00001:intron
CCCGAGTGCCATTCAGGATC+TGG 0.422531 2.4:+70334377 MS.gene00001:CDS
CTTACTCCTTCCACAATCTC+TGG 0.424952 2.4:-70331871 None:intergenic
CCTTCTTGTCTTTCAACCTC+CGG 0.426074 2.4:-70328734 None:intergenic
ATCTTGTTCTGAGTTGATCC+AGG 0.426673 2.4:-70331216 None:intergenic
GCCCACCCCTAAATGATTCA+AGG 0.426677 2.4:-70331040 None:intergenic
TAAGGTCCTGCTGTCATGTA+TGG 0.429429 2.4:+70334784 MS.gene00001:CDS
CCTGAATGGCACTCGGGCAC+TGG 0.430744 2.4:-70334371 None:intergenic
CTCTACAACAGACGAATTGT+TGG 0.431310 2.4:+70335229 MS.gene00001:CDS
AGGACACCTTCTACAGGATT+AGG 0.432054 2.4:+70331808 MS.gene00001:CDS
TGAGTCACCACAGACTATAA+TGG 0.432221 2.4:+70328935 MS.gene00001:CDS
CTCAGCAACCCAATGTGAAC+AGG 0.432583 2.4:-70335987 None:intergenic
GGAATATGATCATGGAAATT+GGG 0.434917 2.4:+70336087 MS.gene00001:CDS
TCTACAACAGACGAATTGTT+GGG 0.435097 2.4:+70335230 MS.gene00001:CDS
GATGCATTTGGGGCACCCTT+AGG 0.436957 2.4:+70329053 MS.gene00001:CDS
GAAATCGATGAAAGCAAGTC+TGG 0.440423 2.4:+70333165 MS.gene00001:CDS
CTCTCTCTTGAGGGCCCCAA+AGG 0.443347 2.4:+70332508 MS.gene00001:CDS
AGTGGGACAATCGGCATCCT+TGG 0.443570 2.4:-70333079 None:intergenic
GATCTAATGCTAGGCTGGTT+CGG 0.444716 2.4:-70329836 None:intergenic
CTGGGTCTAGCCCGTTTGCC+CGG 0.444958 2.4:+70328871 MS.gene00001:CDS
GTCATTTCTACACTTCGTAA+TGG 0.445805 2.4:+70332373 MS.gene00001:CDS
ATGCAACAAACTGCCAATAT+CGG 0.446056 2.4:-70333842 None:intergenic
GAAATTAAAACAGCAGGGAC+AGG 0.447944 2.4:+70335782 MS.gene00001:CDS
AGCTGTTGAAGATTTGTTGC+TGG 0.448006 2.4:+70335869 MS.gene00001:CDS
CCAATGTGAACAGGAGTCAT+AGG 0.449186 2.4:-70335978 None:intergenic
TAACAGGATTCAAGATTGTT+GGG 0.450234 2.4:+70331730 MS.gene00001:intron
AACTGTTTCTCAGGATCGAT+TGG 0.451863 2.4:+70333383 MS.gene00001:intron
TGAGAAACTTGGATGAAGAA+TGG 0.452058 2.4:+70335937 MS.gene00001:CDS
TTTCACGTTCTCTCTCTTGA+GGG 0.452612 2.4:+70332499 MS.gene00001:CDS
TCCAGAATCAACTTAGGATT+AGG 0.453084 2.4:-70328816 None:intergenic
ACAGGGAACACAAGGACAAG+GGG 0.454229 2.4:+70335800 MS.gene00001:CDS
AACGCTCTTGTTGCATTGGT+TGG 0.455023 2.4:+70333252 MS.gene00001:CDS
TGACGGAAATGTTTGGTGGC+AGG 0.456417 2.4:-70334663 None:intergenic
CTTTGATTTCCCTCCACAGC+AGG 0.456515 2.4:-70333540 None:intergenic
TCTGGAGAACCATGGGTTCA+AGG 0.457333 2.4:+70333183 MS.gene00001:CDS
ACCATGGGTTCAAGGACTTA+CGG 0.459012 2.4:+70333191 MS.gene00001:CDS
TGCTCGCCTATCGTCTCAAC+AGG 0.460161 2.4:+70329988 MS.gene00001:CDS
GAAAGACAAGAAGGAGTTAC+CGG 0.460260 2.4:+70328743 MS.gene00001:CDS
TTCACTCCTAATCCTGTAGA+AGG 0.460448 2.4:-70331814 None:intergenic
CCTTGTAATGAATATGGATC+CGG 0.461257 2.4:+70328840 MS.gene00001:CDS
CTCTTCTTTATCATTTGCAC+AGG 0.461315 2.4:-70332121 None:intergenic
CCACATTCCTCAACTCCATC+CGG 0.462105 2.4:-70328890 None:intergenic
TGTTCATTTCCAATCGGAAA+AGG 0.464769 2.4:-70329926 None:intergenic
ATTAGCAGAAGGTTTAACTT+TGG 0.465048 2.4:-70335622 None:intergenic
GGGCGAGGAGCTAGTGATCT+TGG 0.465938 2.4:+70335672 MS.gene00001:CDS
AGAGCGAATGAGGAAAGAAA+TGG 0.466756 2.4:+70330574 MS.gene00001:CDS
TCTTCATCCAAGTTTCTCAA+TGG 0.468649 2.4:-70335933 None:intergenic
GTAGCTCATGATTTCTGCCC+AGG 0.468923 2.4:+70333675 MS.gene00001:CDS
TAATATTGATGTCGAGCAAT+GGG 0.469453 2.4:-70333563 None:intergenic
GGGGAGCCTTTGAGGGAAGA+TGG 0.471128 2.4:+70328993 MS.gene00001:CDS
ATTTCACGTTCTCTCTCTTG+AGG 0.472406 2.4:+70332498 MS.gene00001:CDS
ATAATGATGTTGTCCCCAAA+AGG 0.473532 2.4:+70330098 MS.gene00001:CDS
TTTGAAAATGGGTTTCTAGC+TGG 0.474564 2.4:+70332826 MS.gene00001:CDS
AAACACACATTTCAATGTGT+TGG 0.475783 2.4:+70334707 MS.gene00001:CDS
TTGGGAGTTAATGCCAGTAT+TGG 0.475841 2.4:-70330140 None:intergenic
AATTTGGTGATCAGTGAATT+GGG 0.476491 2.4:-70330158 None:intergenic
GGAGTTGGCTGCAGCAAGCA+AGG 0.477151 2.4:+70330974 MS.gene00001:CDS
CAAGGCTCCAGAATCAACTT+AGG 0.477610 2.4:-70328822 None:intergenic
ATCAGTTGCTCTACTTCCAT+GGG 0.481010 2.4:+70335301 MS.gene00001:CDS
TCATCCTTCAAAATTGAGCT+TGG 0.481622 2.4:+70334452 MS.gene00001:CDS
ATCCAGGGCTGGATAGCAAA+TGG 0.482139 2.4:-70331200 None:intergenic
ATCTCGAGGAGGAGATGGAT+AGG 0.483354 2.4:-70330077 None:intergenic
TGCTTCTGAAAGAATGGACT+CGG 0.484032 2.4:-70332785 None:intergenic
ACGCCTGCGGTCCTGGCCAA+GGG 0.484182 2.4:-70333817 None:intergenic
ACAGTTAGGGGAGCCTTTGA+GGG 0.484591 2.4:+70328986 MS.gene00001:CDS
ACAAGATATCTTAAGAAGAA+AGG 0.487110 2.4:+70330448 MS.gene00001:CDS
TCTAAACGCTCTTGTTGCAT+TGG 0.487462 2.4:+70333248 MS.gene00001:CDS
TCAACTCCATCCGGGCAAAC+GGG 0.488294 2.4:-70328881 None:intergenic
AAGAGAACCATTGAGAAACT+TGG 0.488491 2.4:+70335926 MS.gene00001:CDS
TCTGTTGCTTTGACAAGAGA+TGG 0.488492 2.4:+70332691 MS.gene00001:CDS
AATGAATATGGATCCGGGTC+AGG 0.490132 2.4:+70328846 MS.gene00001:CDS
GCATCCTTGGAACCATTCTC+AGG 0.491609 2.4:-70333066 None:intergenic
GTTCGTACACGATATGTTGA+TGG 0.491663 2.4:-70332736 None:intergenic
AGAATGGACTCGGCATCTGC+AGG 0.492692 2.4:-70332775 None:intergenic
GAGAAACTTGGATGAAGAAT+GGG 0.494611 2.4:+70335938 MS.gene00001:CDS
ATCTCTGGATGGCCACCGGC+AGG 0.495742 2.4:-70331856 None:intergenic
TATCAGATCTAATGCTAGGC+TGG 0.497086 2.4:-70329841 None:intergenic
CAGAGGAGATGTATGTCTAC+AGG 0.497524 2.4:+70333787 MS.gene00001:CDS
AAGTCAGAAATTAAAACAGC+AGG 0.497648 2.4:+70335776 MS.gene00001:CDS
AGAGAAGGAAGGAAGAAGAA+AGG 0.499621 2.4:+70330612 MS.gene00001:CDS
TCCATAATGACACGGTCTTG+CGG 0.499702 2.4:+70330224 MS.gene00001:CDS
AAGATCAATATGGATGATAG+AGG 0.501592 2.4:-70331003 None:intergenic
AAGGGTGCCCCAAATGCATC+AGG 0.501705 2.4:-70329050 None:intergenic
AGAGATTCGCAAAGAGAAAG+AGG 0.502023 2.4:+70330857 MS.gene00001:CDS
TTCAATCCGCATTATTCTTG+AGG 0.502637 2.4:+70333293 MS.gene00001:CDS
TCCACCCTTGGAACTATGAC+TGG 0.504696 2.4:-70335904 None:intergenic
AAGGAAAGCTGCCCTTGAAA+AGG 0.504701 2.4:+70330887 MS.gene00001:CDS
GCTAATAAAATTGCACGAAG+TGG 0.504989 2.4:+70335639 MS.gene00001:CDS
AAATTAAATTCATCATTTGA+CGG 0.505138 2.4:-70334680 None:intergenic
CGACAGTTAGCACTATCTGC+AGG 0.505764 2.4:+70332060 MS.gene00001:CDS
ATTTATTTCCAGCAAGTGAT+GGG 0.509213 2.4:-70333497 None:intergenic
GCCAGATCCTGAATGGCACT+CGG 0.510123 2.4:-70334378 None:intergenic
GATGACAGAAGTGGGACAAT+CGG 0.510133 2.4:-70333088 None:intergenic
CATGATTTCTGCCCAGGCAC+AGG 0.510338 2.4:+70333681 MS.gene00001:CDS
CAGCAGGGACAGGGAACACA+AGG 0.510675 2.4:+70335792 MS.gene00001:CDS
CCTATGACTCCTGTTCACAT+TGG 0.511119 2.4:+70335978 MS.gene00001:CDS
ATAGGCGAGCACGGGAAGAA+TGG 0.511735 2.4:-70329976 None:intergenic
TTCTTCTCTTTCAACATCAA+CGG 0.512077 2.4:-70332857 None:intergenic
AACTATGACTGGCTGCTGCA+TGG 0.513290 2.4:-70335893 None:intergenic
GCGTGTGAAAATCTAAATAC+CGG 0.513699 2.4:+70333123 MS.gene00001:CDS
CCGGATCCATATTCATTACA+AGG 0.514192 2.4:-70328840 None:intergenic
ATTGCCACCTGATGCATTTG+GGG 0.514938 2.4:+70329043 MS.gene00001:CDS
CGTAGAATGAAGAGCGAATG+AGG 0.516219 2.4:+70330564 MS.gene00001:intron
CTAGGCTGGTTCGGAACAAA+CGG 0.517085 2.4:-70329827 None:intergenic
TATTAATAAAGGCTGAGAAA+AGG 0.518452 2.4:+70330823 MS.gene00001:intron
ATCTGACTCTGAGAGTTGTC+CGG 0.518778 2.4:-70333705 None:intergenic
ACAAAGATCCTGCCAGAACC+AGG 0.519239 2.4:-70333882 None:intergenic
GGGGAAGTATAGGGAGTCAC+AGG 0.521596 2.4:-70330016 None:intergenic
AACTCTCTGTTAGGCTTGAA+GGG 0.521883 2.4:-70335567 None:intergenic
GTTCTGAGTTGATCCAGGGC+TGG 0.522243 2.4:-70331211 None:intergenic
TTTATCATTTGCACAGGACC+AGG 0.522278 2.4:-70332115 None:intergenic
TTGAACATCATGATGGCAGT+TGG 0.522513 2.4:+70333904 MS.gene00001:CDS
TCCGTAAGTCCTTGAACCCA+TGG 0.523687 2.4:-70333192 None:intergenic
TGTCCACCAGGTAAAGCTAA+AGG 0.524247 2.4:-70330196 None:intergenic
TCATTATCTCGAGGAGGAGA+TGG 0.525718 2.4:-70330082 None:intergenic
CTTGTGTGGAGGCACAGTTA+GGG 0.526600 2.4:+70328973 MS.gene00001:CDS
AGGAGCTAGTGATCTTGGAC+GGG 0.526845 2.4:+70335677 MS.gene00001:CDS
GTCTACAGGTCTCTACCCCT+TGG 0.527484 2.4:+70333801 MS.gene00001:CDS
TTGAAGGGAGTATATCTTGA+TGG 0.527833 2.4:-70335552 None:intergenic
GCTGCCTCAAACTCTCTGTT+AGG 0.527899 2.4:-70335576 None:intergenic
TTTCTGCCCAGGCACAGGTC+CGG 0.528079 2.4:+70333686 MS.gene00001:CDS
CATTTGACGGAAATGTTTGG+TGG 0.528443 2.4:-70334667 None:intergenic
GAAAATCCTTTAGCTTTACC+TGG 0.531273 2.4:+70330190 MS.gene00001:CDS
TAGAATAGCTAAAGAGTCTA+CGG 0.531468 2.4:+70330920 MS.gene00001:CDS
GTTGCAAGGACACCTTCTAC+AGG 0.531536 2.4:+70331802 MS.gene00001:CDS
AACCAGAGTTCAACTCATGA+AGG 0.532603 2.4:-70334415 None:intergenic
AACCATTTGCTATCCAGCCC+TGG 0.532632 2.4:+70331198 MS.gene00001:CDS
AATTTATTTCCAGCAAGTGA+TGG 0.534389 2.4:-70333498 None:intergenic
AATCGGAAAAGGAGGAGTTC+TGG 0.534753 2.4:-70329915 None:intergenic
ACCCTTCATGAGTTGAACTC+TGG 0.536420 2.4:+70334413 MS.gene00001:CDS
CTCCATTGCAGGCAATGGCA+AGG 0.537404 2.4:+70329789 MS.gene00001:intron
TCTACTTATTGAAAAGCCAT+TGG 0.537504 2.4:+70333653 MS.gene00001:CDS
GGTAGATGTTCATTTCCAAT+CGG 0.538274 2.4:-70329932 None:intergenic
AACATCATGATGGCAGTTGG+AGG 0.538714 2.4:+70333907 MS.gene00001:CDS
CATACATCTCCTCTGCTATG+TGG 0.538744 2.4:-70333779 None:intergenic
GCTGTTGAAGATTTGTTGCT+GGG 0.539538 2.4:+70335870 MS.gene00001:CDS
CCAAATGCATCAGGTGGCAA+TGG 0.540389 2.4:-70329041 None:intergenic
GAAGGAGTTACCGGTTAAGA+AGG 0.540575 2.4:+70328752 MS.gene00001:CDS
GTAATGATCCTGGTTCTGGC+AGG 0.541880 2.4:+70333874 MS.gene00001:CDS
AAGAGAAAGAGGCAGAGAGA+AGG 0.542103 2.4:+70330868 MS.gene00001:CDS
GGACAGGGAACACAAGGACA+AGG 0.543077 2.4:+70335798 MS.gene00001:CDS
GCCAATATCGGTTACGCCTG+CGG 0.543579 2.4:-70333830 None:intergenic
TTCACTGATCACCAAATTGG+TGG 0.543758 2.4:+70330163 MS.gene00001:CDS
GTTCTGGCAGGACCCTCCAT+TGG 0.544427 2.4:-70329899 None:intergenic
CGTTTGCCCGGATGGAGTTG+AGG 0.544889 2.4:+70328883 MS.gene00001:CDS
GTATTGGCTACGTTTGGGTG+AGG 0.545600 2.4:-70330124 None:intergenic
CACTGCTTGAGCATCATCAT+CGG 0.546864 2.4:-70336038 None:intergenic
CACTGCTTGAGCATCATCAT+CGG 0.546864 2.4:-70336065 None:intergenic
AAGAAAGGATGATGCGTGAG+AGG 0.547193 2.4:+70330627 MS.gene00001:CDS
TCTGCTTCTAGTAATGATCC+TGG 0.547326 2.4:+70333864 MS.gene00001:CDS
GGTGACTCATAATAACTCCT+TGG 0.549115 2.4:-70328921 None:intergenic
CAGGTCTCTACCCCTTGGCC+AGG 0.550807 2.4:+70333806 MS.gene00001:CDS
ACTGGATTCACGCGGGATCA+GGG 0.551277 2.4:+70334217 MS.gene00001:CDS
GGATTAGGAGTGAACCAGAA+TGG 0.551830 2.4:+70331823 MS.gene00001:CDS
TTACTGTCGTAGGCAAGACT+AGG 0.551843 2.4:-70329593 None:intergenic
GAGTTGGCTGCAGCAAGCAA+GGG 0.553572 2.4:+70330975 MS.gene00001:CDS
GACTCATAATAACTCCTTGG+AGG 0.553883 2.4:-70328918 None:intergenic
AACCTATGTCTCGATCTTCG+AGG 0.553945 2.4:-70332448 None:intergenic
ATAAGTAGACTCTGTGCAGA+AGG 0.555078 2.4:-70333639 None:intergenic
TAATGATGTTGTCCCCAAAA+GGG 0.555094 2.4:+70330099 MS.gene00001:CDS
AAAAGAAAGCTGCCTTGAGA+AGG 0.555107 2.4:+70334489 MS.gene00001:CDS
TCGGAACAAACGGATATTCA+GGG 0.555690 2.4:-70329817 None:intergenic
CAAGCAGTGGAATATGATCA+TGG 0.556622 2.4:+70336079 MS.gene00001:CDS
GAATAGTAACAGTGCTGAAG+AGG 0.557689 2.4:+70336009 MS.gene00001:CDS
TTAATATTGATGTCGAGCAA+TGG 0.557741 2.4:-70333564 None:intergenic
GAGGAGCTAGTGATCTTGGA+CGG 0.557903 2.4:+70335676 MS.gene00001:CDS
TGAGAAACTTGAGCCTGTTG+AGG 0.558499 2.4:+70335394 MS.gene00001:CDS
CAGTGACCTTAATGTTTCGA+CGG 0.558513 2.4:-70335746 None:intergenic
ATACATCTCCTCTGCTATGT+GGG 0.559503 2.4:-70333778 None:intergenic
GATTGAAGCGTGAGCAAAGG+CGG 0.560756 2.4:+70330666 MS.gene00001:CDS
TGTTGAAAGAGAAGAAGAGT+CGG 0.560811 2.4:+70332864 MS.gene00001:CDS
CTGTTGCAGAACAGCAGAAG+CGG 0.560950 2.4:+70329570 MS.gene00001:CDS
CACAATCTCTGGATGGCCAC+CGG 0.561415 2.4:-70331860 None:intergenic
TTGAGACGATAGGCGAGCAC+GGG 0.564587 2.4:-70329984 None:intergenic
TAGTAACAGTGCTGAAGAGG+TGG 0.566184 2.4:+70336012 MS.gene00001:CDS
TTTATGTTAGGCATATACAT+GGG 0.567216 2.4:+70331978 MS.gene00001:intron
GATTTAGTAAATCCTTCAAG+TGG 0.569152 2.4:+70332922 MS.gene00001:CDS
ATCTTTGTTGAACATCATGA+TGG 0.570451 2.4:+70333897 MS.gene00001:CDS
GCAGCAGCTCTTGATCATGA+TGG 0.570686 2.4:+70335594 MS.gene00001:CDS
TAGGACTGCCAGATCCTGAA+TGG 0.571093 2.4:-70334385 None:intergenic
TGTACGAACTGCATTTAGAC+AGG 0.572915 2.4:+70332750 MS.gene00001:CDS
AGTTGTCCGGACCTGTGCCT+GGG 0.572957 2.4:-70333692 None:intergenic
TCTCGAGGAGGAGATGGATA+GGG 0.573399 2.4:-70330076 None:intergenic
ATTGAAGCGTGAGCAAAGGC+GGG 0.573861 2.4:+70330667 MS.gene00001:CDS
TTGTAACTGCAGGGAAGAAG+TGG 0.574009 2.4:+70332343 MS.gene00001:intron
CAGGGAACACAAGGACAAGG+GGG 0.575472 2.4:+70335801 MS.gene00001:CDS
AAAGGCTAGATCGTGAGAGA+AGG 0.577153 2.4:+70330597 MS.gene00001:CDS
TCGAGACATAGGTTAACTCC+AGG 0.579279 2.4:+70332457 MS.gene00001:CDS
ACAGTTAGAATTGATGGAGT+TGG 0.580281 2.4:+70330959 MS.gene00001:CDS
GTTGAGACGATAGGCGAGCA+CGG 0.580372 2.4:-70329985 None:intergenic
TTTATGTGCAATAAAATTTG+GGG 0.580757 2.4:+70334562 MS.gene00001:CDS
CCAGATCCTGAATGGCACTC+GGG 0.581063 2.4:-70334377 None:intergenic
GACAGGGAACACAAGGACAA+GGG 0.581330 2.4:+70335799 MS.gene00001:CDS
CGGTGGCCATCCAGAGATTG+TGG 0.581934 2.4:+70331861 MS.gene00001:CDS
AACATATCAGATCTAATGCT+AGG 0.582335 2.4:-70329845 None:intergenic
TTGTGTGGAGGCACAGTTAG+GGG 0.582443 2.4:+70328974 MS.gene00001:CDS
CACATTCCTCAACTCCATCC+GGG 0.583117 2.4:-70328889 None:intergenic
GCTTAGAGCAATTGCTTGTG+TGG 0.583221 2.4:+70328959 MS.gene00001:CDS
GAGGCTTATTGATTCTGAAG+AGG 0.583561 2.4:+70333926 MS.gene00001:CDS
AAAGAGATGCAAACCTCAGG+TGG 0.585260 2.4:+70334586 MS.gene00001:CDS
CTCCTTCCACAATCTCTGGA+TGG 0.585762 2.4:-70331867 None:intergenic
ACCCCATTTATACGATCCAA+TGG 0.586523 2.4:+70329883 MS.gene00001:CDS
CTCCTCGAAGATCGAGACAT+AGG 0.586525 2.4:+70332446 MS.gene00001:CDS
ATAGGTCCATCTTCCCTCAA+AGG 0.587067 2.4:-70328999 None:intergenic
CAAAACCTTGAATCATTTAG+GGG 0.587289 2.4:+70331035 MS.gene00001:CDS
AATGGAGCTGCTAATCCTGC+CGG 0.588544 2.4:+70331841 MS.gene00001:CDS
TCACCTCCATACATGACAGC+AGG 0.588857 2.4:-70334790 None:intergenic
AGCAGCCAGTCATAGTTCCA+AGG 0.589263 2.4:+70335899 MS.gene00001:CDS
AACTCATGAAGGGTACTGCT+AGG 0.590927 2.4:-70334404 None:intergenic
AGTGGAAACAAACGTGGGCG+AGG 0.591012 2.4:+70335657 MS.gene00001:CDS
CCATTTATACGATCCAATGG+AGG 0.591874 2.4:+70329886 MS.gene00001:CDS
TCTTGTTCTGAGTTGATCCA+GGG 0.591926 2.4:-70331215 None:intergenic
ATCAACTCAGAACAAGATGT+TGG 0.592070 2.4:+70331221 MS.gene00001:CDS
GGAAAAGGAGGAGTTCTGGC+AGG 0.594733 2.4:-70329911 None:intergenic
AGATGTTGGCAATCTTCTCA+TGG 0.595503 2.4:+70331235 MS.gene00001:CDS
TGACGATGCCAGAGTTGCCA+AGG 0.595709 2.4:+70330382 MS.gene00001:CDS
CTTGTAATGAATATGGATCC+GGG 0.597441 2.4:+70328841 MS.gene00001:CDS
TCTTGTTGCATTGGTTGGTG+TGG 0.597711 2.4:+70333257 MS.gene00001:CDS
GCTTGTCCTGTTGAGACGAT+AGG 0.597986 2.4:-70329994 None:intergenic
TTGGTTGGTGTGGCAAATGA+AGG 0.598262 2.4:+70333267 MS.gene00001:CDS
CTAAGCTCCATTATAGTCTG+TGG 0.598730 2.4:-70328942 None:intergenic
AGTTGGCTGCAGCAAGCAAG+GGG 0.599292 2.4:+70330976 MS.gene00001:CDS
TTATGGAAAACTTGTCCACC+AGG 0.599861 2.4:-70330208 None:intergenic
AAGCAAGTCTGGAGAACCAT+GGG 0.599961 2.4:+70333176 MS.gene00001:CDS
GAACCATTCTCAGGAAAACA+AGG 0.600045 2.4:-70333057 None:intergenic
AAAATCTTGATACCTTCTCA+AGG 0.600897 2.4:-70334501 None:intergenic
TTATGTTAGGCATATACATG+GGG 0.601490 2.4:+70331979 MS.gene00001:intron
GCCAGTCATAGTTCCAAGGG+TGG 0.602421 2.4:+70335903 MS.gene00001:CDS
GGTAAAGAGATGCAAACCTC+AGG 0.602721 2.4:+70334583 MS.gene00001:CDS
ACCGGTTAAGAAGGTGCGAA+AGG 0.603062 2.4:+70328761 MS.gene00001:CDS
GGAATGTGGTGCCTCCTCCA+AGG 0.603095 2.4:+70328904 MS.gene00001:CDS
AGTCAGAAATTAAAACAGCA+GGG 0.604689 2.4:+70335777 MS.gene00001:CDS
TTGGTGGCAGGAATTGCAAT+GGG 0.605005 2.4:-70334651 None:intergenic
GCGTGAGAGGCAGAGAGAAG+AGG 0.605131 2.4:+70330640 MS.gene00001:CDS
GCTAGACCCAGAACCTGACC+CGG 0.605133 2.4:-70328859 None:intergenic
TAGAGCAATTGCTTGTGTGG+AGG 0.605595 2.4:+70328962 MS.gene00001:CDS
TGATGCCAAAAGAATATCAA+AGG 0.605957 2.4:-70334195 None:intergenic
AGCAACTGATTCAGGATCAG+AGG 0.606930 2.4:-70335288 None:intergenic
CCTGAGAGACAATGCTGCAG+TGG 0.609264 2.4:-70335333 None:intergenic
GGCCATCCAGAGATTGTGGA+AGG 0.611302 2.4:+70331865 MS.gene00001:CDS
CGCCTGCGGTCCTGGCCAAG+GGG 0.612330 2.4:-70333816 None:intergenic
GGGTGGACGAGGTCGCCGAA+CGG 0.612585 2.4:+70335821 MS.gene00001:CDS
GACACATATCCTGCTGTGGA+GGG 0.615224 2.4:+70333531 MS.gene00001:CDS
AAATTAAAACAGCAGGGACA+GGG 0.615318 2.4:+70335783 MS.gene00001:CDS
AAAGATTGAAGCGTGAGCAA+AGG 0.615457 2.4:+70330663 MS.gene00001:CDS
CGATGATGATGCTCAAGCAG+TGG 0.616148 2.4:+70336039 MS.gene00001:CDS
CGATGATGATGCTCAAGCAG+TGG 0.616148 2.4:+70336066 MS.gene00001:CDS
TCATAATAACTCCTTGGAGG+AGG 0.617069 2.4:-70328915 None:intergenic
GCAGTGGTTAGAGGAACCCA+TGG 0.617087 2.4:-70335317 None:intergenic
GCAGCCAGTCATAGTTCCAA+GGG 0.618569 2.4:+70335900 MS.gene00001:CDS
TAATGACACGGTCTTGCGGG+TGG 0.618633 2.4:+70330228 MS.gene00001:CDS
GGAGCTGCTAATCCTGCCGG+TGG 0.618742 2.4:+70331844 MS.gene00001:CDS
CTGTGCAAATGATAAAGAAG+AGG 0.619387 2.4:+70332122 MS.gene00001:CDS
AAAATTGGAAGCAAAGGGGA+AGG 0.621545 2.4:+70334317 MS.gene00001:CDS
AGACACATATCCTGCTGTGG+AGG 0.621953 2.4:+70333530 MS.gene00001:CDS
AATCCTTTAGCTTTACCTGG+TGG 0.623781 2.4:+70330193 MS.gene00001:CDS
AATTCACCTCAAGAATAATG+CGG 0.623958 2.4:-70333299 None:intergenic
TCATTTCCAATCGGAAAAGG+AGG 0.629970 2.4:-70329923 None:intergenic
GTTGAGTAAATCATCATCCG+TGG 0.630562 2.4:+70335009 MS.gene00001:CDS
GGAAAGCGATGAAGTTGATG+AGG 0.630670 2.4:+70332885 MS.gene00001:CDS
TTCAGCAGCCGTAAGTGCAG+TGG 0.630745 2.4:+70332396 MS.gene00001:CDS
CATTTATACGATCCAATGGA+GGG 0.631045 2.4:+70329887 MS.gene00001:CDS
AAGACATTGAAGATGTTGCA+AGG 0.631865 2.4:+70331788 MS.gene00001:CDS
CAGAAATCATGAGCTACCAA+TGG 0.632982 2.4:-70333669 None:intergenic
GAATGAGGAAAGAAATGGAA+AGG 0.633242 2.4:+70330579 MS.gene00001:CDS
AACCTGTAACAGTTCCTCCA+CGG 0.633854 2.4:-70335026 None:intergenic
AAGGCGGGAGATAGAACGAA+GGG 0.634531 2.4:+70330682 MS.gene00001:CDS
GTAGGAGAATCCAGCAAAGG+TGG 0.635408 2.4:-70328786 None:intergenic
GCTAGATCGTGAGAGAAGGA+AGG 0.638032 2.4:+70330601 MS.gene00001:CDS
TTAGGATTAGGCTCATGAGT+AGG 0.638513 2.4:-70328804 None:intergenic
AGCACTGCAGAAAACCAAAG+AGG 0.638839 2.4:+70333612 MS.gene00001:CDS
TTATATTTCCCACATAGCAG+AGG 0.640331 2.4:+70333770 MS.gene00001:CDS
GCACGAAGTGGAAACAAACG+TGG 0.646195 2.4:+70335651 MS.gene00001:CDS
CCGGAGGTTGAAAGACAAGA+AGG 0.646614 2.4:+70328734 MS.gene00001:CDS
CCGGATGGAGTTGAGGAATG+TGG 0.648928 2.4:+70328890 MS.gene00001:CDS
TAACTCAAGAGCATCAGCAA+AGG 0.649265 2.4:-70331561 None:intergenic
AAAGCAAGTCTGGAGAACCA+TGG 0.650686 2.4:+70333175 MS.gene00001:CDS
ACCAGAGTTCAACTCATGAA+GGG 0.657800 2.4:-70334414 None:intergenic
GGGACAACATCATTATCTCG+AGG 0.657915 2.4:-70330091 None:intergenic
TCCATTGGATCGTATAAATG+GGG 0.658194 2.4:-70329884 None:intergenic
AAAGGCGGGAGATAGAACGA+AGG 0.661832 2.4:+70330681 MS.gene00001:CDS
TGGAGCATTCTCTTCCTCTG+AGG 0.662209 2.4:+70334750 MS.gene00001:CDS
TTTGGTGGCAGGAATTGCAA+TGG 0.662398 2.4:-70334652 None:intergenic
GGAGCTAGTGATCTTGGACG+GGG 0.663804 2.4:+70335678 MS.gene00001:CDS
ATTTCACAAATATCCACCTG+AGG 0.663951 2.4:-70334599 None:intergenic
TTGGCATCACTGGATTCACG+CGG 0.664248 2.4:+70334209 MS.gene00001:CDS
GGTTGTTTGATGACAGAAGT+GGG 0.664310 2.4:-70333096 None:intergenic
ACAAGACACATATCCTGCTG+TGG 0.665387 2.4:+70333527 MS.gene00001:CDS
TGGGTTCAAGGACTTACGGA+AGG 0.666684 2.4:+70333195 MS.gene00001:CDS
TGAGTAGGAGAATCCAGCAA+AGG 0.670491 2.4:-70328789 None:intergenic
TGGCATCACTGGATTCACGC+GGG 0.670717 2.4:+70334210 MS.gene00001:CDS
AGAACTTAAATCAATTGACA+TGG 0.674041 2.4:+70332025 MS.gene00001:CDS
TTAAGCAATCTTGTCCTCAG+AGG 0.675185 2.4:-70334764 None:intergenic
AGAGTCTACGGAGCTCATTG+AGG 0.677792 2.4:+70330932 MS.gene00001:CDS
GGTGCCCCAAATGCATCAGG+TGG 0.681774 2.4:-70329047 None:intergenic
CTAGTACATTCAAACCTTTG+GGG 0.684269 2.4:-70332522 None:intergenic
GGTCCTGCTGTCATGTATGG+AGG 0.686922 2.4:+70334787 MS.gene00001:CDS
GAGTAAATCATCATCCGTGG+AGG 0.687342 2.4:+70335012 MS.gene00001:CDS
TTTGGGCGGGAAAACACACA+AGG 0.689842 2.4:-70331159 None:intergenic
GCGGGTGGAGAAGAAACGAA+AGG 0.699282 2.4:+70330243 MS.gene00001:CDS
TGGTTGTTTGATGACAGAAG+TGG 0.699422 2.4:-70333097 None:intergenic
ACAACATCATTATCTCGAGG+AGG 0.702218 2.4:-70330088 None:intergenic
CACGAAGTGGAAACAAACGT+GGG 0.731398 2.4:+70335652 MS.gene00001:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr2.4 gene 70328720 70336115 70328720 ID=MS.gene00001
chr2.4 mRNA 70328720 70336115 70328720 ID=MS.gene00001.t1;Parent=MS.gene00001
chr2.4 exon 70328720 70329074 70328720 ID=MS.gene00001.t1.exon1;Parent=MS.gene00001.t1
chr2.4 CDS 70328720 70329074 70328720 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70329570 70329649 70329570 ID=MS.gene00001.t1.exon2;Parent=MS.gene00001.t1
chr2.4 CDS 70329570 70329649 70329570 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70329800 70330264 70329800 ID=MS.gene00001.t1.exon3;Parent=MS.gene00001.t1
chr2.4 CDS 70329800 70330264 70329800 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70330380 70330469 70330380 ID=MS.gene00001.t1.exon4;Parent=MS.gene00001.t1
chr2.4 CDS 70330380 70330469 70330380 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70330569 70330733 70330569 ID=MS.gene00001.t1.exon5;Parent=MS.gene00001.t1
chr2.4 CDS 70330569 70330733 70330569 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70330834 70331056 70330834 ID=MS.gene00001.t1.exon6;Parent=MS.gene00001.t1
chr2.4 CDS 70330834 70331056 70330834 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70331156 70331256 70331156 ID=MS.gene00001.t1.exon7;Parent=MS.gene00001.t1
chr2.4 CDS 70331156 70331256 70331156 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70331542 70331628 70331542 ID=MS.gene00001.t1.exon8;Parent=MS.gene00001.t1
chr2.4 CDS 70331542 70331628 70331542 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70331736 70331888 70331736 ID=MS.gene00001.t1.exon9;Parent=MS.gene00001.t1
chr2.4 CDS 70331736 70331888 70331736 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70331988 70332143 70331988 ID=MS.gene00001.t1.exon10;Parent=MS.gene00001.t1
chr2.4 CDS 70331988 70332143 70331988 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70332355 70332564 70332355 ID=MS.gene00001.t1.exon11;Parent=MS.gene00001.t1
chr2.4 CDS 70332355 70332564 70332355 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70332640 70333314 70332640 ID=MS.gene00001.t1.exon12;Parent=MS.gene00001.t1
chr2.4 CDS 70332640 70333314 70332640 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70333396 70333947 70333396 ID=MS.gene00001.t1.exon13;Parent=MS.gene00001.t1
chr2.4 CDS 70333396 70333947 70333396 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70334194 70334808 70334194 ID=MS.gene00001.t1.exon14;Parent=MS.gene00001.t1
chr2.4 CDS 70334194 70334808 70334194 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70334941 70335045 70334941 ID=MS.gene00001.t1.exon15;Parent=MS.gene00001.t1
chr2.4 CDS 70334941 70335045 70334941 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70335176 70335439 70335176 ID=MS.gene00001.t1.exon16;Parent=MS.gene00001.t1
chr2.4 CDS 70335176 70335439 70335176 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
chr2.4 exon 70335546 70336115 70335546 ID=MS.gene00001.t1.exon17;Parent=MS.gene00001.t1
chr2.4 CDS 70335546 70336115 70335546 ID=cds.MS.gene00001.t1;Parent=MS.gene00001.t1
Gene Sequence

>MS.gene00001

ATGTGGTTTTGTCACCGGAGGTTGAAAGACAAGAAGGAGTTACCGGTTAAGAAGGTGCGAAAGGCGCCACCTTTGCTGGATTCTCCTACTCATGAGCCTAATCCTAAGTTGATTCTGGAGCCTTGTAATGAATATGGATCCGGGTCAGGTTCTGGGTCTAGCCCGTTTGCCCGGATGGAGTTGAGGAATGTGGTGCCTCCTCCAAGGAGTTATTATGAGTCACCACAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGGAGCCTTTGAGGGAAGATGGACCTATTTTGGGAATTGAGTTTGATCCATTGCCACCTGATGCATTTGGGGCACCCTTAGGTATAGTCGATGTTCTTTCAGCTTTGTTTTGCTATCTTTCACTTGCTGTTTTAGAATGAGTTACTTTTTTGTAGTTGATTTTATACTTGCTATCTTTCACTTGCTGTTTTAGAATGAGTTACTTTTTTGTAGTTGATTTTATACTTGTGTTGAGTTCTGCTTATGATAATTGATGTATTTTCTTTTTTATGTTTTGTTTTTTGTCTGTATATTGTACATTCTATTTAGGGATCATGGTGATTGTTCTTATTGTTGACTATAGTGTTTCCTTTTCTGACACATATGTGTGATAAATGGTTAACTAGTTTCTTAGATGTTCTGTATTAAGGTAGCAATGTTGAGATAAAATGCCATCGATTTGGCTGATTCAATCTAAAATGTTGCGAGAAACAATGCTGTCTTGGTACAAGTTGTTAGTGATATATGAATGATTGATTCCGATGGGTGCATGAGTCTTGTTTGGCTACTCACTTCTGGTAGTTTCTTTTGGTGCAGCTGTTGCAGAACAGCAGAAGCGGCCTAGTCTTGCCTACGACAGTAAAATATACGAAAGACATGAAGTTAGAACGAATAAGGTAAGTCTTTGCAGTTGCTGTTTAGATACGCGTCTTAAAAACCCTTTTCTTTCTCATTCACAGTTGTGTGAGATAATTATCTAGATAGGACACCTATATCTGTTTGGTTGCTTCATTTGAAATTCTAATTTAAAACGGGCTCCATTGCAGGCAATGGCAAGGACATTCCCTGAATATCCGTTTGTTCCGAACCAGCCTAGCATTAGATCTGATATGTTTGGACAATTGAGTCAACCCCATTTATACGATCCAATGGAGGGTCCTGCCAGAACTCCTCCTTTTCCGATTGGAAATGAACATCTACCTAGAATTCATGGAACTCAAAGCCATTCTTCCCGTGCTCGCCTATCGTCTCAACAGGACAAGCCTGTGACTCCCTATACTTCCCCTCCTCCCTTTTTGTCTCAGCAGGACAAGCAATCAATTCCCTATCCATCTCCTCCTCGAGATAATGATGTTGTCCCCAAAAGGGAACCTCACCCAAACGTAGCCAATACTGGCATTAACTCCCAATTCACTGATCACCAAATTGGTGGACAAGAAAATCCTTTAGCTTTACCTGGTGGACAAGTTTTCCATAATGACACGGTCTTGCGGGTGGAGAAGAAACGAAAGGTATTAATTGAATTTGTAAGCTAAGTGTTATTTTTTATTATTTTCCCCAACAATACAAAGTTAATGTAATATTCTCTGCTGAGGATGATTTATATTTTTAACTTTATTCATGTAGACTGACGATGCCAGAGTTGCCAAGGAAGTTGAAGCCTATGAAATAAGGATGAAGAAAGAACTTGAGAAACAAGATATCTTAAGAAGAAAGGTCTTATTCAATGAACATAACATGTCACTATATATTGATGGAGCTTTAAAGACATCCTATTCTTTTTTAGCTAACCCTTCTATTTTCATTTCCTCGTAGAATGAAGAGCGAATGAGGAAAGAAATGGAAAGGCTAGATCGTGAGAGAAGGAAGGAAGAAGAAAGGATGATGCGTGAGAGGCAGAGAGAAGAGGAAAGATTGAAGCGTGAGCAAAGGCGGGAGATAGAACGAAGGGAAAAATATATGATGAAAGAACATTTAAGAGTAAGTTTTAATCCCCATGTTATTGCTTTATTGAATCAAATTGATCTAAAGATAAATAGTGTATCTTACTATTACCTTCTTGTGTTATATATTAATAAAGGCTGAGAAAAGGAAGCAAAAAGAAGAGATTCGCAAAGAGAAAGAGGCAGAGAGAAGGAAAGCTGCCCTTGAAAAGGCAAATGCTCGTAGAATAGCTAAAGAGTCTACGGAGCTCATTGAGGATGAACAGTTAGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGGCTTTCCTCTATCATCCATATTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGGGGTGGGCAATTTCTCATATTTTACTTAGTGATATTACATAATTTGGTTCTCTTAACATTTGTACTAAGAAAAATGCTGCACTCCAACATTTGTACTGTAGATTCCTTGTGTGTTTTCCCGCCCAAAAGTGTAAAGCTAAAAAAACCATTTGCTATCCAGCCCTGGATCAACTCAGAACAAGATGTTGGCAATCTTCTCATGGTATGTTTGAATTGCCTCTCTTGTTTCCTTATAGTGTACATATATAACATACAACATTGATTGCAAAATTCTTTTTTTGGCACTGTCAAGAGGCGGGGGGCGAAGTTGGCTTTAAGTTGAACTTCCATGTATGTTACACTGAGGTTATTGATATAATTGTAACGTGTGGATGCACTTCTATTTGCAGTACAAGTTTTATTAACATCTTTTATTCTTAATTTGTTTTTTTAGCTTAAATTGAGGAATCTGAATTTGATGCATGAAACCTGTGGTGTTCTATTTCAGGTTTGGAGATTCTTGATTACCTTTGCTGATGCTCTTGAGTTATGGCCTTTTACTCTTGATGAATTTGTACAAGCATTTCATGATTATGTGAGTAAATCTGGCCTTTCCTAATGATTTTGTACTGCAAGTGAACTATTTTTCTTGCAATTTTTGGCTCATTTATGGGTGTTTAAAATTAAACTTAATAATAACAGGATTCAAGATTGTTGGGTGAGATACATGTTGCTGTTCTTAAAATGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGAGTGAACCAGAATGGAGCTGCTAATCCTGCCGGTGGCCATCCAGAGATTGTGGAAGGAGTAAGTTGAACTATATCAAAAAAATTATCTGTTATTTTTAGACAAATATGGTATTTTGTTTGATGCATTCCACATCAATAATGCTGTGTTTTATGTTAGGCATATACATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCTGAAATTTTGCGACAGTTAGCACTATCTGCAGGATTTGGACCACAGTTGAAAAAAAGAAGTATTACCTGGTCCTGTGCAAATGATAAAGAAGAGGTTCATTTTCTTTATTATACTTTTTTAATTTTCAACTCAAATGTATTATCATTTTAGTTTGTTGGTTCTGCATGAGCTTTTTGTTATCATTGACTATTTTCACCGACCATATATGATTTTGCATGCATGTAAAATCAACAATGGAATTTCTCGTCATACATTTGATAATTGATAATGAACTAAGTGGAGCTAAATGTATTTGTAACTGCAGGGAAGAAGTGGTGATGATGTCATTTCTACACTTCGTAATGGTTCAGCAGCCGTAAGTGCAGTGGCAAAAATGCGAGAGAAAGGTTTATTAGCTCCTCGAAGATCGAGACATAGGTTAACTCCAGGAACAGTTAAATTTGCAGCATTTCACGTTCTCTCTCTTGAGGGCCCCAAAGGTTTGAATGTACTAGAGCTTGCAGAGAAGATTCAGGTGAATTGTTTATCATCAGATTGAATTCTCTTTTAAAAATTGTCAACTTTGTTCTTATGTTTCTTTTCTTGTTAGAAATCTGGTCTTCGGGACCTGACAACCAGCAAGACACCTGAAGCATCAATTTCTGTTGCTTTGACAAGAGATGGCAAACTTTTCGAAAGAATAGCTCCATCAACATATCGTGTACGAACTGCATTTAGACAGGATCCTGCAGATGCCGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATCCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCCGTTGATGTTGAAAGAGAAGAAGAGTCGGAAAGCGATGAAGTTGATGAGGATCCTGAAGACGATGATTTAGTAAATCCTTCAAGTGGAAACCAAAATTCAGTACAATACGATAATATGGATATTAGTTTGGTAAATGTAAAAGAAAATTTGGGCAATGATGTAGACGTTATTCAAAATAAGCTTGATGATACTGATCTGCCTTGTTTTCCTGAGAATGGTTCCAAGGATGCCGATTGTCCCACTTCTGTCATCAAACAACCAGTTGCGTGTGAAAATCTAAATACCGGAAATCTTGATGATAATATGGAAATCGATGAAAGCAAGTCTGGAGAACCATGGGTTCAAGGACTTACGGAAGGAGAATACTCTGATCTCAGTGTAGAAGAGCGTCTAAACGCTCTTGTTGCATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGCATTATTCTTGAGGTGAATTAAACTCGCATGTAATAGATATCTTCTAGTTTACTTTTACATTTAGTTTTTTAGTTGACGTGAACTGTTTCTCAGGATCGATTGGAAGCAGCAAATGCTCTGAAAAAGCAAATGTGGGCTGAAGCACAAATAGATAAAGTTCGTCTGAAAGATGATTATATTAGTAAATTAGATTTCCCATCACTTGCTGGAAATAAATTTGAAACACAAGACACATATCCTGCTGTGGAGGGAAATCAAAGCCCATTGCTCGACATCAATATTAACAACATTAAGAATGAAGCATCACCCAGCACTGCAGAAAACCAAAGAGGAACTCCTTCTGCACAGAGTCTACTTATTGAAAAGCCATTGGTAGCTCATGATTTCTGCCCAGGCACAGGTCCGGACAACTCTCAGAGTCAGATGCATGCACAATATTCAAAAAGGTCACGATCACAGTTAAAATCTTATATTTCCCACATAGCAGAGGAGATGTATGTCTACAGGTCTCTACCCCTTGGCCAGGACCGCAGGCGTAACCGATATTGGCAGTTTGTTGCATCTGCTTCTAGTAATGATCCTGGTTCTGGCAGGATCTTTGTTGAACATCATGATGGCAGTTGGAGGCTTATTGATTCTGAAGAGGTAACTTCATCGACCTGCCACATTGATGTCTTTGTTCGTACTTTATTCTTTTAAATCTAAAGATGTCAATGTCTGTGCAAATTTGTAATGTATTTATATACTTTTCCTTGATTAGTATTTTATTACCGTTTTGAGCTTTTGCCTTTTTTTCTCTCACAGCATAGCCATTTGTTTTGGACAAATTATACTGTTTTGAGCTTGCCTTTTTGTAATGTATATATTATTTATTCTACCATTCCTATGCAGGCCTTTGATATTCTTTTGGCATCACTGGATTCACGCGGGATCAGGGAGTCTCATTTGCGCTTAATGTTGCAAAAGATTGAGAAATCCTTTAGAGAAAATGTTCGAAAAAATACACAATATACAAAAATTGGAAGCAAAGGGGAAGGTTCTATGAAAACTGAAGCTGATGAAGCATATCCAGTGCCCGAGTGCCATTCAGGATCTGGCAGTCCTAGCAGTACCCTTCATGAGTTGAACTCTGGTTCATCTGAAACTTCATCATCCTTCAAAATTGAGCTTGGCAAAAGTGAGAATGAAAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTTCAGAAGTGGATGTGGAAAGAATGCTATAATTCATCAATTTTATGTGCAATAAAATTTGGGGTAAAGAGATGCAAACCTCAGGTGGATATTTGTGAAATCTGTCTTGATCCTTATTTTATGGAAGACTCCCATTGCAATTCCTGCCACCAAACATTTCCGTCAAATGATGAATTTAATTTTTCTAAACACACATTTCAATGTGTTGGTAATTTATCCAAAGATATTATGGAGCATTCTCTTCCTCTGAGGACAAGATTGCTTAAGGTCCTGCTGTCATGTATGGAGGTGAGTTGATGGCAACTTTGGATTCTTAATCTCGAACCTAATTTTTTTGTAAATTTAAAGATGTCATTCTGCATCCTATTATTATTTTTACCTTTGAGGATTGTATTATTGTACTTGCATTTTGATTTACAGGCATCTGTTCTCTCTGAAGCATTTGGAACAATTTGGACAACTGATTTTAGGAAGCGTTGGGGTGTGAAGTTGAGTAAATCATCATCCGTGGAGGAACTGTTACAGGTTTCATGCCGTTTCAATTCTTGAAGTTAATCTTCACACACACACACACACACACACACACACACAGAGATAAAAAAATCGACAATCCATGTCAATGCTGACATGCATAAATTAAAAACCTATTTTGCAGATGTTGACCTTATTTGAAAAAGCGCTACGGCGTGATTTTCTATCATCAAACTTCTCTACAACAGACGAATTGTTGGGATTAAGCAGTGTGTCAAAAAGTGCTGCACACGTGTCCTCTGATCCTGAATCAGTTGCTCTACTTCCATGGGTTCCTCTAACCACTGCAGCATTGTCTCTCAGGCTTTTTGAGTTTGATTCATCCATCAACTACGTAAAGCTTGAGAAACTTGAGCCTGTTGAGGAGAAAGAAGCAACAGAATACATTGTGAGTTTCATTTTCCTGTGTTATTTGGTTTTGAGCATCTGGGTCGCTGACTTGAAATTTTCATCATAATCTAATGGAACATTTTATTTTTTTTGCTTATTAGCAGAGGCTTCCATCAAGATATACTCCCTTCAAGCCTAACAGAGAGTTTGAGGCAGCAGCTCTTGATCATGATGGATTCACCAAAGTTAAACCTTCTGCTAATAAAATTGCACGAAGTGGAAACAAACGTGGGCGAGGAGCTAGTGATCTTGGACGGGGTAAAAAGCTGTCTAAAAGAATGTACAATTCCAAACAAGATACTGGCCGTCGAAACATTAAGGTCACTGAGAATCTAAGTCAGAAATTAAAACAGCAGGGACAGGGAACACAAGGACAAGGGGGTGGACGAGGTCGCCGAACGGTCAGAAAACGTAGAGTAGAAAAAAGAGCTGTTGAAGATTTGTTGCTGGGCCATGCAGCAGCCAGTCATAGTTCCAAGGGTGGAAGAGAACCATTGAGAAACTTGGATGAAGAATGGGATGTAGAAAAATTTAGTCCTATGACTCCTGTTCACATTGGGTTGCTGAGAATAGTAACAGTGCTGAAGAGGTGGAATCCGATGATGATGCTCAAGCAGTGGAATCCGATGATGATGCTCAAGCAGTGGAATATGATCATGGAAATTGGGAGATAG
Protein sequence

>MS.gene00001.t1

MWFCHRRLKDKKELPVKKVRKAPPLLDSPTHEPNPKLILEPCNEYGSGSGSGSSPFARMELRNVVPPPRSYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPLAVAEQQKRPSLAYDSKIYERHEVRTNKAMARTFPEYPFVPNQPSIRSDMFGQLSQPHLYDPMEGPARTPPFPIGNEHLPRIHGTQSHSSRARLSSQQDKPVTPYTSPPPFLSQQDKQSIPYPSPPRDNDVVPKREPHPNVANTGINSQFTDHQIGGQENPLALPGGQVFHNDTVLRVEKKRKTDDARVAKEVEAYEIRMKKELEKQDILRRKNEERMRKEMERLDRERRKEEERMMRERQREEERLKREQRREIERREKYMMKEHLRAEKRKQKEEIRKEKEAERRKAALEKANARRIAKESTELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLKKPFAIQPWINSEQDVGNLLMVWRFLITFADALELWPFTLDEFVQAFHDYDSRLLGEIHVAVLKMIIKDIEDVARTPSTGLGVNQNGAANPAGGHPEIVEGAYTWGFDIRNWQKNLNQLTWPEILRQLALSAGFGPQLKKRSITWSCANDKEEGRSGDDVISTLRNGSAAVSAVAKMREKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGPKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDGKLFERIAPSTYRVRTAFRQDPADAESILSEARKKIQIFENGFLAGEDAVDVEREEESESDEVDEDPEDDDLVNPSSGNQNSVQYDNMDISLVNVKENLGNDVDVIQNKLDDTDLPCFPENGSKDADCPTSVIKQPVACENLNTGNLDDNMEIDESKSGEPWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRIILEDRLEAANALKKQMWAEAQIDKVRLKDDYISKLDFPSLAGNKFETQDTYPAVEGNQSPLLDININNIKNEASPSTAENQRGTPSAQSLLIEKPLVAHDFCPGTGPDNSQSQMHAQYSKRSRSQLKSYISHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEHHDGSWRLIDSEEAFDILLASLDSRGIRESHLRLMLQKIEKSFRENVRKNTQYTKIGSKGEGSMKTEADEAYPVPECHSGSGSPSSTLHELNSGSSETSSSFKIELGKSENEKKAALRRYQDFQKWMWKECYNSSILCAIKFGVKRCKPQVDICEICLDPYFMEDSHCNSCHQTFPSNDEFNFSKHTFQCVGNLSKDIMEHSLPLRTRLLKVLLSCMEASVLSEAFGTIWTTDFRKRWGVKLSKSSSVEELLQMLTLFEKALRRDFLSSNFSTTDELLGLSSVSKSAAHVSSDPESVALLPWVPLTTAALSLRLFEFDSSINYVKLEKLEPVEEKEATEYIRLPSRYTPFKPNREFEAAALDHDGFTKVKPSANKIARSGNKRGRGASDLGRGKKLSKRMYNSKQDTGRRNIKVTENLSQKLKQQGQGTQGQGGGRGRRTVRKRRVEKRAVEDLLLGHAAASHSSKGGREPLRNLDEEWDVEKFSPMTPVHIGLLRIVTVLKRWNPMMMLKQWNPMMMLKQWNMIMEIGR