Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000114.t1 | XP_013467665.1 | 96.2 | 293 | 8 | 1 | 1 | 290 | 1 | 293 | 9.20E-160 | 572.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000114.t1 | Q7F8R0 | 58.9 | 299 | 100 | 7 | 4 | 287 | 6 | 296 | 4.4e-86 | 319.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000114.t1 | A0A072VIQ3 | 96.2 | 293 | 8 | 1 | 1 | 290 | 1 | 293 | 6.6e-160 | 572.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene000114.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000114.t1 | MTR_1g053960 | 96.246 | 293 | 8 | 1 | 1 | 290 | 1 | 293 | 0.0 | 575 |
| MS.gene000114.t1 | MTR_1g053960 | 96.035 | 227 | 6 | 1 | 67 | 290 | 1 | 227 | 9.49e-159 | 441 |
| MS.gene000114.t1 | MTR_7g093130 | 70.395 | 304 | 70 | 9 | 1 | 287 | 1 | 301 | 7.29e-136 | 386 |
| MS.gene000114.t1 | MTR_1g116940 | 58.462 | 260 | 95 | 6 | 40 | 290 | 3 | 258 | 6.11e-100 | 293 |
| MS.gene000114.t1 | MTR_7g093130 | 70.940 | 234 | 52 | 7 | 67 | 287 | 1 | 231 | 9.79e-100 | 292 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000114.t1 | AT3G12130 | 51.163 | 301 | 82 | 9 | 1 | 290 | 1 | 247 | 1.38e-81 | 246 |
| MS.gene000114.t1 | AT5G06770 | 51.402 | 214 | 88 | 7 | 87 | 290 | 10 | 217 | 2.03e-58 | 186 |
| MS.gene000114.t1 | AT5G06770 | 71.698 | 53 | 15 | 0 | 20 | 72 | 4 | 56 | 7.66e-21 | 89.0 |
| MS.gene000114.t1 | AT5G06770 | 51.402 | 214 | 88 | 7 | 87 | 290 | 32 | 239 | 2.19e-58 | 187 |
| MS.gene000114.t1 | AT5G06770 | 66.667 | 78 | 20 | 2 | 1 | 72 | 1 | 78 | 2.37e-28 | 109 |
| MS.gene000114.t1 | AT5G06770 | 51.741 | 201 | 81 | 7 | 100 | 290 | 18 | 212 | 6.14e-55 | 177 |
| MS.gene000114.t1 | AT5G06770 | 51.741 | 201 | 81 | 7 | 100 | 290 | 18 | 212 | 6.14e-55 | 177 |
| MS.gene000114.t1 | AT5G06770 | 51.741 | 201 | 81 | 7 | 100 | 290 | 18 | 212 | 6.14e-55 | 177 |
| MS.gene000114.t1 | AT3G12130 | 63.924 | 158 | 49 | 4 | 139 | 290 | 20 | 175 | 2.14e-53 | 172 |
| MS.gene000114.t1 | AT5G06770 | 59.333 | 150 | 56 | 4 | 141 | 290 | 23 | 167 | 4.03e-51 | 166 |
Find 96 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCAATGTTTCTAAGATT+TGG | 0.218015 | 1.3:-37871073 | None:intergenic |
| TCTGCTGAAGGCTGCAAATT+TGG | 0.233846 | 1.3:+37870767 | MS.gene000114:CDS |
| TTGGTCTTGATGTTTCTTCC+AGG | 0.287578 | 1.3:-37871220 | None:intergenic |
| ATGTTTCTTCCAGGTGCGGC+TGG | 0.289209 | 1.3:-37871211 | None:intergenic |
| CCCATTCACCATGGGCAAAA+TGG | 0.307326 | 1.3:-37870799 | None:intergenic |
| GTTCAATGTTTCTAAGATTT+GGG | 0.309393 | 1.3:-37871072 | None:intergenic |
| GATCAGTGTAGAAGCTTCTT+TGG | 0.311263 | 1.3:+37870958 | MS.gene000114:CDS |
| GGAGCACCCAGGGTGGATTT+AGG | 0.312131 | 1.3:-37871175 | None:intergenic |
| TAAGATTTGGGTCAGATTCA+TGG | 0.329032 | 1.3:-37871060 | None:intergenic |
| CAGGTTTAAGATTCATCATC+TGG | 0.330164 | 1.3:-37870658 | None:intergenic |
| ACTGATCTTGGCAGTGGAAT+TGG | 0.339065 | 1.3:-37870942 | None:intergenic |
| GCTAAAGGATCCTGCACATT+TGG | 0.348312 | 1.3:+37871259 | MS.gene000114:CDS |
| CACTTCTCACATCATGTTCC+CGG | 0.349238 | 1.3:+37870617 | MS.gene000114:CDS |
| GGTCGAGTTGAGGCTCCTTC+TGG | 0.361759 | 1.3:+37870896 | MS.gene000114:CDS |
| ATCAACCCTCCCTCGTTTGC+GGG | 0.367443 | 1.3:-37867719 | None:intergenic |
| TTGAAAATTTGACTCCTGTT+TGG | 0.371380 | 1.3:-37871030 | None:intergenic |
| TCTTTGGCTGGAGCTATCAT+TGG | 0.389153 | 1.3:+37870974 | MS.gene000114:CDS |
| GTTGAGGCTCCTTCTGGTCT+AGG | 0.393390 | 1.3:+37870902 | MS.gene000114:CDS |
| TCCACCCTGGGTGCTCCTGC+TGG | 0.401990 | 1.3:+37871181 | MS.gene000114:CDS |
| AGCATTGCTGGCTGTCCATT+TGG | 0.402746 | 1.3:+37870584 | MS.gene000114:intron |
| GGTGGGGCGGCAACATTTCT+AGG | 0.421558 | 1.3:-37870689 | None:intergenic |
| GGTCTAGGCGGTACTAGCTT+TGG | 0.431440 | 1.3:+37870917 | MS.gene000114:CDS |
| AGAAGCTTCTACACTGATCT+TGG | 0.443492 | 1.3:-37870954 | None:intergenic |
| AGGGTTGATTCTGCTGTTAA+CGG | 0.445988 | 1.3:+37867733 | MS.gene000114:CDS |
| AGCAAAATTCTCACACAGCT+TGG | 0.448378 | 1.3:-37871239 | None:intergenic |
| GCCGCTGAATTGCGAAAGAT+AGG | 0.451271 | 1.3:+37871307 | MS.gene000114:CDS |
| GGTGGTGGCCCAGCCGCACC+TGG | 0.454343 | 1.3:+37871202 | MS.gene000114:CDS |
| CTGGGTGCTCCTGCTGGTGG+TGG | 0.456820 | 1.3:+37871187 | MS.gene000114:CDS |
| GCAACAGAAATGGACTCAAC+TGG | 0.458170 | 1.3:+37868766 | MS.gene000114:intron |
| CTTAGAAACATTGAACTTGA+GGG | 0.465557 | 1.3:+37871079 | MS.gene000114:CDS |
| GGCATACGACCAACATTTGT+AGG | 0.466912 | 1.3:-37870872 | None:intergenic |
| ACAAATGTTGGTCGTATGCC+TGG | 0.469504 | 1.3:+37870875 | MS.gene000114:CDS |
| GCGGCTGGGCCACCACCAGC+AGG | 0.473223 | 1.3:-37871196 | None:intergenic |
| TTCGCAATTCAGCGGCTCCA+TGG | 0.475467 | 1.3:-37871300 | None:intergenic |
| AGTGTAGAAGCTTCTTTGGC+TGG | 0.476113 | 1.3:+37870962 | MS.gene000114:CDS |
| CCAACATTTGTAGGTGCCAT+TGG | 0.476227 | 1.3:-37870863 | None:intergenic |
| AAGCAGATATGTCGCCAAAC+AGG | 0.477279 | 1.3:+37871016 | MS.gene000114:CDS |
| AATCAACCCTCCCTCGTTTG+CGG | 0.479400 | 1.3:-37867720 | None:intergenic |
| TGTTTCTTCCAGGTGCGGCT+GGG | 0.483249 | 1.3:-37871210 | None:intergenic |
| TGCCCCACCTAAATCCACCC+TGG | 0.484995 | 1.3:+37871168 | MS.gene000114:CDS |
| TCATCAACTGATGGAGCAAA+AGG | 0.487156 | 1.3:-37870833 | None:intergenic |
| AAGTGACAACCCTCACCAAA+TGG | 0.487932 | 1.3:-37870599 | None:intergenic |
| TCGCAATTCAGCGGCTCCAT+GGG | 0.491844 | 1.3:-37871299 | None:intergenic |
| GCCCCACCTAAATCCACCCT+GGG | 0.494162 | 1.3:+37871169 | MS.gene000114:CDS |
| TGCTGGCTGTCCATTTGGTG+AGG | 0.513418 | 1.3:+37870589 | MS.gene000114:CDS |
| GGCTGGAGCTATCATTGGAA+AGG | 0.517932 | 1.3:+37870979 | MS.gene000114:CDS |
| CCATTGTTAGAGACTGGTGG+TGG | 0.518004 | 1.3:-37870707 | None:intergenic |
| ACATTTCTAGGAGGTGCAGC+AGG | 0.522238 | 1.3:-37870677 | None:intergenic |
| GCTGGCTGTCCATTTGGTGA+GGG | 0.526668 | 1.3:+37870590 | MS.gene000114:CDS |
| TCTTAGAAACATTGAACTTG+AGG | 0.528176 | 1.3:+37871078 | MS.gene000114:CDS |
| ACATCTTTCTCCAAATGTGC+AGG | 0.531941 | 1.3:-37871269 | None:intergenic |
| ACCCTGGGTGCTCCTGCTGG+TGG | 0.535033 | 1.3:+37871184 | MS.gene000114:CDS |
| GCTGGAGCTATCATTGGAAA+GGG | 0.536163 | 1.3:+37870980 | MS.gene000114:CDS |
| CACCCAGGGTGGATTTAGGT+GGG | 0.536478 | 1.3:-37871171 | None:intergenic |
| ACCGAGTTCCCATTCACCAT+GGG | 0.537718 | 1.3:-37870807 | None:intergenic |
| GGCAACGGCATTATAACCAC+CGG | 0.537881 | 1.3:-37870636 | None:intergenic |
| ACCACCAGCAGGAGCACCCA+GGG | 0.538705 | 1.3:-37871185 | None:intergenic |
| GCACCCAGGGTGGATTTAGG+TGG | 0.545220 | 1.3:-37871172 | None:intergenic |
| GCCCATGGTGAATGGGAACT+CGG | 0.546163 | 1.3:+37870806 | MS.gene000114:CDS |
| AACAAGTTTAATTCTGCTGA+AGG | 0.547801 | 1.3:+37870755 | MS.gene000114:CDS |
| TCCTATCTTTCGCAATTCAG+CGG | 0.550243 | 1.3:-37871308 | None:intergenic |
| GCAGAACCATTGTTAGAGAC+TGG | 0.559543 | 1.3:-37870713 | None:intergenic |
| CTAGTACCGCCTAGACCAGA+AGG | 0.560068 | 1.3:-37870911 | None:intergenic |
| TGGATGCCCGCAAACGAGGG+AGG | 0.563890 | 1.3:+37867713 | MS.gene000114:CDS |
| AAGATTCATCATCTGGGCAA+CGG | 0.568550 | 1.3:-37870651 | None:intergenic |
| GGACGGTGATCATCAACTGA+TGG | 0.568940 | 1.3:-37870842 | None:intergenic |
| CCAATGGCACCTACAAATGT+TGG | 0.569357 | 1.3:+37870863 | MS.gene000114:CDS |
| TTCTACACTGATCTTGGCAG+TGG | 0.569888 | 1.3:-37870948 | None:intergenic |
| CATTTGTAGGTGCCATTGGA+CGG | 0.575412 | 1.3:-37870859 | None:intergenic |
| CACCACCAGCAGGAGCACCC+AGG | 0.583302 | 1.3:-37871186 | None:intergenic |
| CAATGGATGCCCGCAAACGA+GGG | 0.583791 | 1.3:+37867710 | None:intergenic |
| GAAAGATGTCACTTTGCCCA+TGG | 0.584192 | 1.3:+37871283 | MS.gene000114:CDS |
| CTTGATGTTTCTTCCAGGTG+CGG | 0.585145 | 1.3:-37871215 | None:intergenic |
| ACAATGGATGCCCGCAAACG+AGG | 0.590226 | 1.3:+37867709 | None:intergenic |
| GAAATGGACTCAACTGGTGT+AGG | 0.590424 | 1.3:+37868772 | MS.gene000114:intron |
| AGGTTTAAGATTCATCATCT+GGG | 0.591191 | 1.3:-37870657 | None:intergenic |
| AATTAAACTTGTTACATATG+CGG | 0.591258 | 1.3:-37870745 | None:intergenic |
| CCACCACCAGTCTCTAACAA+TGG | 0.591961 | 1.3:+37870707 | MS.gene000114:CDS |
| TACCGAGTTCCCATTCACCA+TGG | 0.592664 | 1.3:-37870808 | None:intergenic |
| GGATGCCCGCAAACGAGGGA+GGG | 0.598945 | 1.3:+37867714 | MS.gene000114:CDS |
| AGTTGATGATCACCGTCCAA+TGG | 0.605823 | 1.3:+37870847 | MS.gene000114:CDS |
| ATTGTTAGAGACTGGTGGTG+GGG | 0.606388 | 1.3:-37870705 | None:intergenic |
| GAAGGAGCCTCAACTCGACC+AGG | 0.607588 | 1.3:-37870893 | None:intergenic |
| TCGTATGCCTGGTCGAGTTG+AGG | 0.614018 | 1.3:+37870886 | MS.gene000114:CDS |
| GGAGCTATCATTGGAAAGGG+TGG | 0.621933 | 1.3:+37870983 | MS.gene000114:CDS |
| GTTAGAGACTGGTGGTGGGG+CGG | 0.623695 | 1.3:-37870702 | None:intergenic |
| CATTGTTAGAGACTGGTGGT+GGG | 0.635968 | 1.3:-37870706 | None:intergenic |
| ACCCAGGGTGGATTTAGGTG+GGG | 0.640360 | 1.3:-37871170 | None:intergenic |
| AATTGCACAAGCAAGTAACA+TGG | 0.648235 | 1.3:+37871114 | MS.gene000114:CDS |
| TCCGTCAAGAAAACCAAACA+AGG | 0.648477 | 1.3:+37867757 | MS.gene000114:CDS |
| GCAACGGCATTATAACCACC+GGG | 0.654418 | 1.3:-37870635 | None:intergenic |
| TTCTCACATCATGTTCCCGG+TGG | 0.667160 | 1.3:+37870620 | MS.gene000114:CDS |
| GGGGCGGCAACATTTCTAGG+AGG | 0.676956 | 1.3:-37870686 | None:intergenic |
| ACCAGCAGGAGCACCCAGGG+TGG | 0.680551 | 1.3:-37871182 | None:intergenic |
| GAACCATTGTTAGAGACTGG+TGG | 0.695821 | 1.3:-37870710 | None:intergenic |
| GAGGCTCCTTCTGGTCTAGG+CGG | 0.707296 | 1.3:+37870905 | MS.gene000114:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTAAATTTAGTTGT+TGG | + | chr1.3:37867929-37867948 | MS.gene000114:intron | 10.0% |
| !! | AATAAATAAAAAGTTTGAAG+AGG | - | chr1.3:37867794-37867813 | None:intergenic | 15.0% |
| !! | CTATTTACAAGATAATAAAA+TGG | + | chr1.3:37869187-37869206 | MS.gene000114:intron | 15.0% |
| !! | TACTACATTTAATAATTTAG+AGG | + | chr1.3:37868712-37868731 | MS.gene000114:intron | 15.0% |
| !! | TTCAAAATATTTGTTTAGAT+AGG | - | chr1.3:37868844-37868863 | None:intergenic | 15.0% |
| !!! | AGATTTTAAAAATTACAATC+TGG | - | chr1.3:37869394-37869413 | None:intergenic | 15.0% |
| !!! | TTTTCATAACAATAATACTT+TGG | + | chr1.3:37870513-37870532 | MS.gene000114:intron | 15.0% |
| !! | ACAGAATAATGGTTTATTAA+TGG | + | chr1.3:37868978-37868997 | MS.gene000114:intron | 20.0% |
| !! | ATATTATAGGCAATGATATA+TGG | + | chr1.3:37870072-37870091 | MS.gene000114:intron | 20.0% |
| !! | ATCAAATTGTAACAGAATAA+TGG | + | chr1.3:37868967-37868986 | MS.gene000114:intron | 20.0% |
| !! | GTTTAGTCAATTAAGAAATA+CGG | + | chr1.3:37869566-37869585 | MS.gene000114:intron | 20.0% |
| !! | TTACAAGATAATAAAATGGT+TGG | + | chr1.3:37869191-37869210 | MS.gene000114:intron | 20.0% |
| !! | TTTAATTGATGTAACATAAC+AGG | - | chr1.3:37869930-37869949 | None:intergenic | 20.0% |
| !!! | AATTAAACTTGTTACATATG+CGG | - | chr1.3:37870748-37870767 | None:intergenic | 20.0% |
| !!! | TTAAACAGTTTTTTAAGTTC+AGG | - | chr1.3:37868321-37868340 | None:intergenic | 20.0% |
| !!! | TTATTTTGATAGTAGTTAAC+AGG | + | chr1.3:37870464-37870483 | MS.gene000114:intron | 20.0% |
| !!! | TTCTTTTAGATAAAGGTAAT+TGG | - | chr1.3:37868492-37868511 | None:intergenic | 20.0% |
| !!! | TTTAGGTTTCTTTTAGATAA+AGG | - | chr1.3:37868499-37868518 | None:intergenic | 20.0% |
| ! | AACTACTTAGTTGAAGTAAT+AGG | - | chr1.3:37869299-37869318 | None:intergenic | 25.0% |
| ! | AATTAAGAAATACGGAATTC+CGG | + | chr1.3:37869574-37869593 | MS.gene000114:intron | 25.0% |
| ! | ACATTCCTATATTCTTCTTA+AGG | + | chr1.3:37870418-37870437 | MS.gene000114:intron | 25.0% |
| ! | ACTACTTAGTTGAAGTAATA+GGG | - | chr1.3:37869298-37869317 | None:intergenic | 25.0% |
| ! | AGCAAGATTTACAGTAATTA+AGG | - | chr1.3:37869097-37869116 | None:intergenic | 25.0% |
| ! | ATGTTAGTATTAAAGAGAGT+TGG | - | chr1.3:37869871-37869890 | None:intergenic | 25.0% |
| ! | CATATCAATGGCTATAAAAT+TGG | - | chr1.3:37870196-37870215 | None:intergenic | 25.0% |
| ! | GCTGATAAGTCATTATTAAA+TGG | - | chr1.3:37869122-37869141 | None:intergenic | 25.0% |
| ! | TAATGGTTTATTAATGGAGT+TGG | + | chr1.3:37868984-37869003 | MS.gene000114:intron | 25.0% |
| ! | TACAAAATTTACAGTCGTAA+AGG | - | chr1.3:37869491-37869510 | None:intergenic | 25.0% |
| ! | TAGTTAACAGGAAATGAAAA+GGG | + | chr1.3:37870476-37870495 | MS.gene000114:intron | 25.0% |
| ! | TTGTTGGATTTATGTTTGTT+TGG | + | chr1.3:37867945-37867964 | MS.gene000114:intron | 25.0% |
| ! | TTTAGTGTAATTACAAGTGT+CGG | + | chr1.3:37868195-37868214 | MS.gene000114:intron | 25.0% |
| ! | TTTATTAATGGAGTTGGAAA+AGG | + | chr1.3:37868990-37869009 | MS.gene000114:intron | 25.0% |
| !! | ATTTTATAGCCATTGATATG+TGG | + | chr1.3:37870196-37870215 | MS.gene000114:intron | 25.0% |
| !! | GAATGTTATTTGTTAGCTTA+TGG | - | chr1.3:37870222-37870241 | None:intergenic | 25.0% |
| !! | TTAATGTTTTGCAACAGAAA+TGG | + | chr1.3:37868756-37868775 | MS.gene000114:intron | 25.0% |
| !!! | AAAATTGGTTTTCTTTCAGA+GGG | - | chr1.3:37870181-37870200 | None:intergenic | 25.0% |
| !!! | AGTTCAATGTTTCTAAGATT+TGG | - | chr1.3:37871076-37871095 | None:intergenic | 25.0% |
| !!! | CAATTACGGTTTAGAATTTT+GGG | - | chr1.3:37868522-37868541 | None:intergenic | 25.0% |
| !!! | GTTCAATGTTTCTAAGATTT+GGG | - | chr1.3:37871075-37871094 | None:intergenic | 25.0% |
| !!! | TAAAATTGGTTTTCTTTCAG+AGG | - | chr1.3:37870182-37870201 | None:intergenic | 25.0% |
| !!! | TCAACCATCTTTTTTTCAAT+AGG | + | chr1.3:37869838-37869857 | MS.gene000114:intron | 25.0% |
| !!! | TCTGTGTTTTTGATTTTGAA+AGG | + | chr1.3:37867827-37867846 | MS.gene000114:intron | 25.0% |
| !!! | TTCTTTCCTTTAGTTTTTCT+TGG | + | chr1.3:37869745-37869764 | MS.gene000114:intron | 25.0% |
| AACAAGTTTAATTCTGCTGA+AGG | + | chr1.3:37870755-37870774 | MS.gene000114:CDS | 30.0% | |
| AGATTAGAACCTGAAAAACT+TGG | - | chr1.3:37868818-37868837 | None:intergenic | 30.0% | |
| AGCACCTATTGAAAAAAAGA+TGG | - | chr1.3:37869845-37869864 | None:intergenic | 30.0% | |
| AGTTAACAGGAAATGAAAAG+GGG | + | chr1.3:37870477-37870496 | MS.gene000114:intron | 30.0% | |
| ATCTAATTCTGCATCTTAAC+TGG | + | chr1.3:37868902-37868921 | MS.gene000114:intron | 30.0% | |
| CATCTCTTGTAGCATATTAT+AGG | + | chr1.3:37870059-37870078 | MS.gene000114:intron | 30.0% | |
| CTACTTAGTTGAAGTAATAG+GGG | - | chr1.3:37869297-37869316 | None:intergenic | 30.0% | |
| CTTAGAAACATTGAACTTGA+GGG | + | chr1.3:37871079-37871098 | MS.gene000114:CDS | 30.0% | |
| CTTGTAAATAGCTTACCAAT+TGG | - | chr1.3:37869178-37869197 | None:intergenic | 30.0% | |
| GAAAAACTAAAGGAAAGAAC+AGG | - | chr1.3:37869744-37869763 | None:intergenic | 30.0% | |
| GATAATAAAATGGTTGGATC+AGG | + | chr1.3:37869197-37869216 | MS.gene000114:intron | 30.0% | |
| GTAGTTAACAGGAAATGAAA+AGG | + | chr1.3:37870475-37870494 | MS.gene000114:intron | 30.0% | |
| TAAATAGCTTACCAATTGGA+AGG | - | chr1.3:37869174-37869193 | None:intergenic | 30.0% | |
| TACTTAGTTGAAGTAATAGG+GGG | - | chr1.3:37869296-37869315 | None:intergenic | 30.0% | |
| TCTAATTCTGCATCTTAACT+GGG | + | chr1.3:37868903-37868922 | MS.gene000114:intron | 30.0% | |
| TCTTAGAAACATTGAACTTG+AGG | + | chr1.3:37871078-37871097 | MS.gene000114:CDS | 30.0% | |
| TGCAAAACAAGAAAACATCA+TGG | - | chr1.3:37870565-37870584 | None:intergenic | 30.0% | |
| TTATAAGCCAACATAGAGTT+GGG | + | chr1.3:37870278-37870297 | MS.gene000114:intron | 30.0% | |
| TTCATCAACTAAAATCCCAT+TGG | + | chr1.3:37870015-37870034 | MS.gene000114:intron | 30.0% | |
| TTCCACCTTAAGAAGAATAT+AGG | - | chr1.3:37870426-37870445 | None:intergenic | 30.0% | |
| TTCCTATATTCTTCTTAAGG+TGG | + | chr1.3:37870421-37870440 | MS.gene000114:intron | 30.0% | |
| TTGAAAATTTGACTCCTGTT+TGG | - | chr1.3:37871033-37871052 | None:intergenic | 30.0% | |
| ! | AGCTTTTGGTAAAACATTAG+AGG | + | chr1.3:37869325-37869344 | MS.gene000114:intron | 30.0% |
| ! | AGGTTTAAGATTCATCATCT+GGG | - | chr1.3:37870660-37870679 | None:intergenic | 30.0% |
| ! | AGTTCAACTAAAGAAGCATA+TGG | - | chr1.3:37868105-37868124 | None:intergenic | 30.0% |
| ! | GGAAAAGGATAATAATTTGC+AGG | + | chr1.3:37869005-37869024 | MS.gene000114:intron | 30.0% |
| ! | TGTATATGGTGTTTAAAACG+AGG | - | chr1.3:37868458-37868477 | None:intergenic | 30.0% |
| ! | TTTAGGATGATTGCTTCAAT+TGG | + | chr1.3:37868574-37868593 | MS.gene000114:intron | 30.0% |
| !! | AAGTAGTTCTATCAAGCTTT+TGG | + | chr1.3:37869311-37869330 | MS.gene000114:intron | 30.0% |
| !! | GCAATTACGGTTTAGAATTT+TGG | - | chr1.3:37868523-37868542 | None:intergenic | 30.0% |
| !! | GTGTTTTGTTCACATAAATC+TGG | + | chr1.3:37869635-37869654 | MS.gene000114:intron | 30.0% |
| !! | TGGCTTTGATTTGATGTATA+TGG | - | chr1.3:37868472-37868491 | None:intergenic | 30.0% |
| AACACAGAACAAGCAATCAA+AGG | - | chr1.3:37869514-37869533 | None:intergenic | 35.0% | |
| AACCATATCATATCCACCAA+AGG | - | chr1.3:37870143-37870162 | None:intergenic | 35.0% | |
| AACCTGAAAAACTTGGTACA+AGG | - | chr1.3:37868811-37868830 | None:intergenic | 35.0% | |
| AATTGCACAAGCAAGTAACA+TGG | + | chr1.3:37871114-37871133 | MS.gene000114:CDS | 35.0% | |
| ACACAACTCTGTTGCAATTA+CGG | - | chr1.3:37868536-37868555 | None:intergenic | 35.0% | |
| ACTATATCAACCTTCAACTC+AGG | - | chr1.3:37868628-37868647 | None:intergenic | 35.0% | |
| AGATGAGAAAAACCAATGGT+AGG | - | chr1.3:37870044-37870063 | None:intergenic | 35.0% | |
| AGTGTGTGTTATCTAACCTT+TGG | + | chr1.3:37870124-37870143 | MS.gene000114:intron | 35.0% | |
| ATAGGCAATGATATATGGTG+TGG | + | chr1.3:37870077-37870096 | MS.gene000114:intron | 35.0% | |
| ATTTAGTGTTCCCATTGTCA+TGG | - | chr1.3:37869036-37869055 | None:intergenic | 35.0% | |
| CAAGAGATGAGAAAAACCAA+TGG | - | chr1.3:37870048-37870067 | None:intergenic | 35.0% | |
| CCTAATATTGAACCTTCTAC+CGG | - | chr1.3:37869596-37869615 | None:intergenic | 35.0% | |
| CGAATCAGAACAATGACTAT+CGG | - | chr1.3:37870244-37870263 | None:intergenic | 35.0% | |
| CTATATCAACCTTCAACTCA+GGG | - | chr1.3:37868627-37868646 | None:intergenic | 35.0% | |
| GAACAACTAAAACACTGCAA+TGG | - | chr1.3:37869681-37869700 | None:intergenic | 35.0% | |
| GCATAAACAAAGTTCTCTCT+TGG | - | chr1.3:37869267-37869286 | None:intergenic | 35.0% | |
| GGAAGACCAAGAAAAACTAA+AGG | - | chr1.3:37869754-37869773 | None:intergenic | 35.0% | |
| GGTGAAAAAGAAACCTTGTT+TGG | - | chr1.3:37867773-37867792 | None:intergenic | 35.0% | |
| GTTATAAGCCAACATAGAGT+TGG | + | chr1.3:37870277-37870296 | MS.gene000114:intron | 35.0% | |
| TAAGATTTGGGTCAGATTCA+TGG | - | chr1.3:37871063-37871082 | None:intergenic | 35.0% | |
| TGAACTATGAAGCACAGATA+CGG | + | chr1.3:37868119-37868138 | MS.gene000114:intron | 35.0% | |
| TTAGACACAGACGCATAATT+TGG | - | chr1.3:37869231-37869250 | None:intergenic | 35.0% | |
| TTATTGCTCTATGCTTGTCA+TGG | + | chr1.3:37868065-37868084 | MS.gene000114:intron | 35.0% | |
| TTTAGTGTTCCCATTGTCAT+GGG | - | chr1.3:37869035-37869054 | None:intergenic | 35.0% | |
| ! | AACCTTTGGTGGATATGATA+TGG | + | chr1.3:37870138-37870157 | MS.gene000114:intron | 35.0% |
| ! | AATCTAGACTTAGCTGGTTT+GGG | - | chr1.3:37869819-37869838 | None:intergenic | 35.0% |
| ! | CAGGTTTAAGATTCATCATC+TGG | - | chr1.3:37870661-37870680 | None:intergenic | 35.0% |
| ! | CTGTGTGAGAATTTTGCTAA+AGG | + | chr1.3:37871244-37871263 | MS.gene000114:CDS | 35.0% |
| ! | GGGTATTCTAAGCTTTATAC+AGG | + | chr1.3:37868923-37868942 | MS.gene000114:intron | 35.0% |
| !! | TCAGAGAGTGTTCAAAGTTT+AGG | + | chr1.3:37868557-37868576 | MS.gene000114:intron | 35.0% |
| !!! | ACCTTGTTTGGTTTTCTTGA+CGG | - | chr1.3:37867761-37867780 | None:intergenic | 35.0% |
| !!! | CGGTTTAGAATTTTGGGTTT+AGG | - | chr1.3:37868516-37868535 | None:intergenic | 35.0% |
| AAATACGGAATTCCGGTAGA+AGG | + | chr1.3:37869581-37869600 | MS.gene000114:intron | 40.0% | |
| AACCAATGGTAGGTTTCCAA+TGG | - | chr1.3:37870034-37870053 | None:intergenic | 40.0% | |
| AAGATTCATCATCTGGGCAA+CGG | - | chr1.3:37870654-37870673 | None:intergenic | 40.0% | |
| ACATCTTTCTCCAAATGTGC+AGG | - | chr1.3:37871272-37871291 | None:intergenic | 40.0% | |
| ACCAATGGTAGGTTTCCAAT+GGG | - | chr1.3:37870033-37870052 | None:intergenic | 40.0% | |
| AGAAGCTTCTACACTGATCT+TGG | - | chr1.3:37870957-37870976 | None:intergenic | 40.0% | |
| AGACTTCTGCATCATGTACA+AGG | + | chr1.3:37869949-37869968 | MS.gene000114:intron | 40.0% | |
| AGCAAAATTCTCACACAGCT+TGG | - | chr1.3:37871242-37871261 | None:intergenic | 40.0% | |
| AGCTTATGGCCACATATCAA+TGG | - | chr1.3:37870208-37870227 | None:intergenic | 40.0% | |
| ATAGCTTACCAATTGGAAGG+TGG | - | chr1.3:37869171-37869190 | None:intergenic | 40.0% | |
| CCGGTAGAAGGTTCAATATT+AGG | + | chr1.3:37869593-37869612 | MS.gene000114:intron | 40.0% | |
| GAATCTAGACTTAGCTGGTT+TGG | - | chr1.3:37869820-37869839 | None:intergenic | 40.0% | |
| GACTTCTGCATCATGTACAA+GGG | + | chr1.3:37869950-37869969 | MS.gene000114:intron | 40.0% | |
| GATCAGTGTAGAAGCTTCTT+TGG | + | chr1.3:37870958-37870977 | MS.gene000114:CDS | 40.0% | |
| GATGAAACCAGATCAACTCA+TGG | - | chr1.3:37870001-37870020 | None:intergenic | 40.0% | |
| GTGTGTTATCTAACCTTTGG+TGG | + | chr1.3:37870127-37870146 | MS.gene000114:intron | 40.0% | |
| TAGCTTACCAATTGGAAGGT+GGG | - | chr1.3:37869170-37869189 | None:intergenic | 40.0% | |
| TCATCAACTGATGGAGCAAA+AGG | - | chr1.3:37870836-37870855 | None:intergenic | 40.0% | |
| TCCGTCAAGAAAACCAAACA+AGG | + | chr1.3:37867757-37867776 | MS.gene000114:CDS | 40.0% | |
| TCCTATCTTTCGCAATTCAG+CGG | - | chr1.3:37871311-37871330 | None:intergenic | 40.0% | |
| TGCTTGTTCTGTGTTTACGT+AGG | + | chr1.3:37869519-37869538 | MS.gene000114:intron | 40.0% | |
| TGGTTGAATCTAGACTTAGC+TGG | - | chr1.3:37869825-37869844 | None:intergenic | 40.0% | |
| TTCGACAACAGAGTTTCAGA+GGG | - | chr1.3:37868350-37868369 | None:intergenic | 40.0% | |
| TTGCTTCAACCTATGAAGCA+TGG | - | chr1.3:37868268-37868287 | None:intergenic | 40.0% | |
| ! | AGGGTTGATTCTGCTGTTAA+CGG | + | chr1.3:37867733-37867752 | MS.gene000114:CDS | 40.0% |
| ! | ATTGCTTCAATTGGAAGCAC+AGG | + | chr1.3:37868583-37868602 | MS.gene000114:intron | 40.0% |
| ! | TCTGATTCGCATTATCTGAC+TGG | + | chr1.3:37870255-37870274 | MS.gene000114:intron | 40.0% |
| !! | AGCCTTGTACCAAGTTTTTC+AGG | + | chr1.3:37868806-37868825 | MS.gene000114:CDS | 40.0% |
| !! | TCACTGGAATTTGCTATCGA+TGG | + | chr1.3:37868374-37868393 | MS.gene000114:intron | 40.0% |
| !! | TTGGTCTTGATGTTTCTTCC+AGG | - | chr1.3:37871223-37871242 | None:intergenic | 40.0% |
| !! | TTGGTTTTCTTTCAGAGGGA+GGG | - | chr1.3:37870177-37870196 | None:intergenic | 40.0% |
| !!! | ATTGGTTTTCTTTCAGAGGG+AGG | - | chr1.3:37870178-37870197 | None:intergenic | 40.0% |
| !!! | TTCTTGTTTTGCAGCATTGC+TGG | + | chr1.3:37870572-37870591 | MS.gene000114:intron | 40.0% |
| AAGCAGATATGTCGCCAAAC+AGG | + | chr1.3:37871016-37871035 | MS.gene000114:CDS | 45.0% | |
| AAGTGACAACCCTCACCAAA+TGG | - | chr1.3:37870602-37870621 | None:intergenic | 45.0% | |
| ACAAATGTTGGTCGTATGCC+TGG | + | chr1.3:37870875-37870894 | MS.gene000114:CDS | 45.0% | |
| ACTGATCTTGGCAGTGGAAT+TGG | - | chr1.3:37870945-37870964 | None:intergenic | 45.0% | |
| AGTGTAGAAGCTTCTTTGGC+TGG | + | chr1.3:37870962-37870981 | MS.gene000114:CDS | 45.0% | |
| CAACATAGAGTTGGGCACTT+GGG | + | chr1.3:37870286-37870305 | MS.gene000114:intron | 45.0% | |
| CACTTCTCACATCATGTTCC+CGG | + | chr1.3:37870617-37870636 | MS.gene000114:CDS | 45.0% | |
| CAGGTGATTAGACTTGACTG+TGG | - | chr1.3:37869911-37869930 | None:intergenic | 45.0% | |
| CATTGTTAGAGACTGGTGGT+GGG | - | chr1.3:37870709-37870728 | None:intergenic | 45.0% | |
| CCAATGCTACAAAGCTGATC+AGG | - | chr1.3:37869450-37869469 | None:intergenic | 45.0% | |
| CCAATGGCACCTACAAATGT+TGG | + | chr1.3:37870863-37870882 | MS.gene000114:CDS | 45.0% | |
| CTTCGACAACAGAGTTTCAG+AGG | - | chr1.3:37868351-37868370 | None:intergenic | 45.0% | |
| CTTGATGTTTCTTCCAGGTG+CGG | - | chr1.3:37871218-37871237 | None:intergenic | 45.0% | |
| GAACCATTGTTAGAGACTGG+TGG | - | chr1.3:37870713-37870732 | None:intergenic | 45.0% | |
| GCAGAACCATTGTTAGAGAC+TGG | - | chr1.3:37870716-37870735 | None:intergenic | 45.0% | |
| GCTAAAGGATCCTGCACATT+TGG | + | chr1.3:37871259-37871278 | MS.gene000114:CDS | 45.0% | |
| GCTGGAGCTATCATTGGAAA+GGG | + | chr1.3:37870980-37870999 | MS.gene000114:CDS | 45.0% | |
| GGCATACGACCAACATTTGT+AGG | - | chr1.3:37870875-37870894 | None:intergenic | 45.0% | |
| TATGAAGCATGGACACTCCT+CGG | - | chr1.3:37868257-37868276 | None:intergenic | 45.0% | |
| TCCCATTGGAAACCTACCAT+TGG | + | chr1.3:37870029-37870048 | MS.gene000114:intron | 45.0% | |
| TCTGCTGAAGGCTGCAAATT+TGG | + | chr1.3:37870767-37870786 | MS.gene000114:CDS | 45.0% | |
| TCTGTTGTCGAAGTAGTCAC+TGG | + | chr1.3:37868358-37868377 | MS.gene000114:intron | 45.0% | |
| TCTTTGGCTGGAGCTATCAT+TGG | + | chr1.3:37870974-37870993 | MS.gene000114:CDS | 45.0% | |
| TGATGAACCCACCTTCCAAT+TGG | + | chr1.3:37869160-37869179 | MS.gene000114:intron | 45.0% | |
| TTCTACACTGATCTTGGCAG+TGG | - | chr1.3:37870951-37870970 | None:intergenic | 45.0% | |
| ! | AGGAGAGTACAACAGTTGGA+GGG | - | chr1.3:37869787-37869806 | None:intergenic | 45.0% |
| ! | AGTGAGGAGAGTACAACAGT+TGG | - | chr1.3:37869791-37869810 | None:intergenic | 45.0% |
| ! | ATTGTTAGAGACTGGTGGTG+GGG | - | chr1.3:37870708-37870727 | None:intergenic | 45.0% |
| ! | CCAACATTTGTAGGTGCCAT+TGG | - | chr1.3:37870866-37870885 | None:intergenic | 45.0% |
| ! | CCATTTTGCCCATGGTGAAT+GGG | + | chr1.3:37870799-37870818 | MS.gene000114:CDS | 45.0% |
| ! | CCTGATCAGCTTTGTAGCAT+TGG | + | chr1.3:37869447-37869466 | MS.gene000114:intron | 45.0% |
| ! | GAAATGGACTCAACTGGTGT+AGG | + | chr1.3:37868772-37868791 | MS.gene000114:intron | 45.0% |
| ! | GATGCAGTTGCGGATTAACT+TGG | + | chr1.3:37870349-37870368 | MS.gene000114:intron | 45.0% |
| ! | GCAACAGAAATGGACTCAAC+TGG | + | chr1.3:37868766-37868785 | MS.gene000114:intron | 45.0% |
| ! | TTCACATGACCCTGAGTTGA+AGG | + | chr1.3:37868615-37868634 | MS.gene000114:intron | 45.0% |
| !! | ACAGACACCATGAGTTGATC+TGG | + | chr1.3:37869991-37870010 | MS.gene000114:intron | 45.0% |
| !! | AGTTGATGATCACCGTCCAA+TGG | + | chr1.3:37870847-37870866 | MS.gene000114:CDS | 45.0% |
| !! | CATTTGTAGGTGCCATTGGA+CGG | - | chr1.3:37870862-37870881 | None:intergenic | 45.0% |
| !! | GAAAGATGTCACTTTGCCCA+TGG | + | chr1.3:37871283-37871302 | MS.gene000114:CDS | 45.0% |
| !!! | AAATTACAATTTTATTTATA+TGG | - | chr1.3:37868008-37868027 | None:intergenic | 5.0% |
| AAAGAACAGGACCAGAGCAG+TGG | - | chr1.3:37869731-37869750 | None:intergenic | 50.0% | |
| AATCAACCCTCCCTCGTTTG+CGG | - | chr1.3:37867723-37867742 | None:intergenic | 50.0% | |
| ACCGAGTTCCCATTCACCAT+GGG | - | chr1.3:37870810-37870829 | None:intergenic | 50.0% | |
| CCAACATAGAGTTGGGCACT+TGG | + | chr1.3:37870285-37870304 | MS.gene000114:intron | 50.0% | |
| CCAAGTGCCCAACTCTATGT+TGG | - | chr1.3:37870288-37870307 | None:intergenic | 50.0% | |
| CCACCACCAGTCTCTAACAA+TGG | + | chr1.3:37870707-37870726 | MS.gene000114:CDS | 50.0% | |
| CCATTGTTAGAGACTGGTGG+TGG | - | chr1.3:37870710-37870729 | None:intergenic | 50.0% | |
| CCCATTCACCATGGGCAAAA+TGG | - | chr1.3:37870802-37870821 | None:intergenic | 50.0% | |
| GCAACGGCATTATAACCACC+GGG | - | chr1.3:37870638-37870657 | None:intergenic | 50.0% | |
| GCAGGAAGACCCATGACAAT+GGG | + | chr1.3:37869023-37869042 | MS.gene000114:intron | 50.0% | |
| GCCGCTGAATTGCGAAAGAT+AGG | + | chr1.3:37871307-37871326 | MS.gene000114:CDS | 50.0% | |
| GCTTTGCTCTGATGCAGTTG+CGG | + | chr1.3:37870339-37870358 | MS.gene000114:intron | 50.0% | |
| GGACGGTGATCATCAACTGA+TGG | - | chr1.3:37870845-37870864 | None:intergenic | 50.0% | |
| GGAGCTATCATTGGAAAGGG+TGG | + | chr1.3:37870983-37871002 | MS.gene000114:CDS | 50.0% | |
| GGCAACGGCATTATAACCAC+CGG | - | chr1.3:37870639-37870658 | None:intergenic | 50.0% | |
| GGCTGGAGCTATCATTGGAA+AGG | + | chr1.3:37870979-37870998 | MS.gene000114:CDS | 50.0% | |
| GTACAACAGTTGGAGGGAAG+AGG | - | chr1.3:37869781-37869800 | None:intergenic | 50.0% | |
| TACCGAGTTCCCATTCACCA+TGG | - | chr1.3:37870811-37870830 | None:intergenic | 50.0% | |
| TGCAGGAAGACCCATGACAA+TGG | + | chr1.3:37869022-37869041 | MS.gene000114:intron | 50.0% | |
| TTCTCACATCATGTTCCCGG+TGG | + | chr1.3:37870620-37870639 | MS.gene000114:CDS | 50.0% | |
| ! | ACATTTCTAGGAGGTGCAGC+AGG | - | chr1.3:37870680-37870699 | None:intergenic | 50.0% |
| ! | AGCATTGCTGGCTGTCCATT+TGG | + | chr1.3:37870584-37870603 | MS.gene000114:intron | 50.0% |
| ! | GAGGAGAGTACAACAGTTGG+AGG | - | chr1.3:37869788-37869807 | None:intergenic | 50.0% |
| ! | GCTTCAATTGGAAGCACAGG+TGG | + | chr1.3:37868586-37868605 | MS.gene000114:intron | 50.0% |
| !! | AACCATCGCTCTGGAGCAAA+GGG | - | chr1.3:37869423-37869442 | None:intergenic | 50.0% |
| !! | ATCTGCTGTTTCCACTGCTC+TGG | + | chr1.3:37869717-37869736 | MS.gene000114:intron | 50.0% |
| !! | GAGGAGTGTCCATGCTTCAT+AGG | + | chr1.3:37868256-37868275 | MS.gene000114:intron | 50.0% |
| !! | GCCATTTTGCCCATGGTGAA+TGG | + | chr1.3:37870798-37870817 | MS.gene000114:CDS | 50.0% |
| !! | GCTGGTTTGGGCATATAGTG+AGG | - | chr1.3:37869807-37869826 | None:intergenic | 50.0% |
| !!! | GACAAGTGCCATTTTGCCCA+TGG | + | chr1.3:37870791-37870810 | MS.gene000114:CDS | 50.0% |
| ATCAACCCTCCCTCGTTTGC+GGG | - | chr1.3:37867722-37867741 | None:intergenic | 55.0% | |
| ATGTTTCTTCCAGGTGCGGC+TGG | - | chr1.3:37871214-37871233 | None:intergenic | 55.0% | |
| CTAGTACCGCCTAGACCAGA+AGG | - | chr1.3:37870914-37870933 | None:intergenic | 55.0% | |
| GCACAGATACGGACACGACA+CGG | + | chr1.3:37868130-37868149 | MS.gene000114:intron | 55.0% | |
| GCATGGACACTCCTCGGATT+AGG | - | chr1.3:37868251-37868270 | None:intergenic | 55.0% | |
| GCCCATGGTGAATGGGAACT+CGG | + | chr1.3:37870806-37870825 | MS.gene000114:CDS | 55.0% | |
| GTTGAGGCTCCTTCTGGTCT+AGG | + | chr1.3:37870902-37870921 | MS.gene000114:CDS | 55.0% | |
| TCAGGATGCAACCATCGCTC+TGG | - | chr1.3:37869432-37869451 | None:intergenic | 55.0% | |
| TCGCAATTCAGCGGCTCCAT+GGG | - | chr1.3:37871302-37871321 | None:intergenic | 55.0% | |
| TGTTTCTTCCAGGTGCGGCT+GGG | - | chr1.3:37871213-37871232 | None:intergenic | 55.0% | |
| TTCGCAATTCAGCGGCTCCA+TGG | - | chr1.3:37871303-37871322 | None:intergenic | 55.0% | |
| ! | ACCCAGGGTGGATTTAGGTG+GGG | - | chr1.3:37871173-37871192 | None:intergenic | 55.0% |
| ! | CACCCAGGGTGGATTTAGGT+GGG | - | chr1.3:37871174-37871193 | None:intergenic | 55.0% |
| ! | GCTGGCTGTCCATTTGGTGA+GGG | + | chr1.3:37870590-37870609 | MS.gene000114:CDS | 55.0% |
| ! | GGTCTAGGCGGTACTAGCTT+TGG | + | chr1.3:37870917-37870936 | MS.gene000114:CDS | 55.0% |
| ! | TCGTATGCCTGGTCGAGTTG+AGG | + | chr1.3:37870886-37870905 | MS.gene000114:CDS | 55.0% |
| ! | TGCTGGCTGTCCATTTGGTG+AGG | + | chr1.3:37870589-37870608 | MS.gene000114:CDS | 55.0% |
| !! | ACCATCGCTCTGGAGCAAAG+GGG | - | chr1.3:37869422-37869441 | None:intergenic | 55.0% |
| !! | CAACCATCGCTCTGGAGCAA+AGG | - | chr1.3:37869424-37869443 | None:intergenic | 55.0% |
| ACCTGGACACGCCTAATCCG+AGG | + | chr1.3:37868237-37868256 | MS.gene000114:intron | 60.0% | |
| CAGTTGGAGGGAAGAGGCAG+AGG | - | chr1.3:37869775-37869794 | None:intergenic | 60.0% | |
| GAAGGAGCCTCAACTCGACC+AGG | - | chr1.3:37870896-37870915 | None:intergenic | 60.0% | |
| GAGGCTCCTTCTGGTCTAGG+CGG | + | chr1.3:37870905-37870924 | MS.gene000114:CDS | 60.0% | |
| GCCCCACCTAAATCCACCCT+GGG | + | chr1.3:37871169-37871188 | MS.gene000114:CDS | 60.0% | |
| GGTGGGGCGGCAACATTTCT+AGG | - | chr1.3:37870692-37870711 | None:intergenic | 60.0% | |
| TCCCCTTTGCTCCAGAGCGA+TGG | + | chr1.3:37869418-37869437 | MS.gene000114:intron | 60.0% | |
| TGCCCCACCTAAATCCACCC+TGG | + | chr1.3:37871168-37871187 | MS.gene000114:CDS | 60.0% | |
| ! | GCACCCAGGGTGGATTTAGG+TGG | - | chr1.3:37871175-37871194 | None:intergenic | 60.0% |
| ! | GGAGCACCCAGGGTGGATTT+AGG | - | chr1.3:37871178-37871197 | None:intergenic | 60.0% |
| ! | GGGGCGGCAACATTTCTAGG+AGG | - | chr1.3:37870689-37870708 | None:intergenic | 60.0% |
| ! | TCCTCGGATTAGGCGTGTCC+AGG | - | chr1.3:37868241-37868260 | None:intergenic | 60.0% |
| !! | GGTCGAGTTGAGGCTCCTTC+TGG | + | chr1.3:37870896-37870915 | MS.gene000114:CDS | 60.0% |
| !! | GTTAGAGACTGGTGGTGGGG+CGG | - | chr1.3:37870705-37870724 | None:intergenic | 60.0% |
| !! | TGTCGGTGTCGCGTCAGTGT+CGG | + | chr1.3:37868212-37868231 | MS.gene000114:intron | 60.0% |
| GGATGCCCGCAAACGAGGGA+GGG | + | chr1.3:37867714-37867733 | MS.gene000114:CDS | 65.0% | |
| TGGATGCCCGCAAACGAGGG+AGG | + | chr1.3:37867713-37867732 | MS.gene000114:CDS | 65.0% | |
| ! | TCGCGTCAGTGTCGGACACC+TGG | + | chr1.3:37868220-37868239 | MS.gene000114:intron | 65.0% |
| !! | ACCACCAGCAGGAGCACCCA+GGG | - | chr1.3:37871188-37871207 | None:intergenic | 65.0% |
| ACCCTGGGTGCTCCTGCTGG+TGG | + | chr1.3:37871184-37871203 | MS.gene000114:CDS | 70.0% | |
| CTGGGTGCTCCTGCTGGTGG+TGG | + | chr1.3:37871187-37871206 | MS.gene000114:CDS | 70.0% | |
| TCCACCCTGGGTGCTCCTGC+TGG | + | chr1.3:37871181-37871200 | MS.gene000114:CDS | 70.0% | |
| !! | ACCAGCAGGAGCACCCAGGG+TGG | - | chr1.3:37871185-37871204 | None:intergenic | 70.0% |
| !! | CACCACCAGCAGGAGCACCC+AGG | - | chr1.3:37871189-37871208 | None:intergenic | 70.0% |
| ! | GCGGCTGGGCCACCACCAGC+AGG | - | chr1.3:37871199-37871218 | None:intergenic | 80.0% |
| !! | GGTGGTGGCCCAGCCGCACC+TGG | + | chr1.3:37871202-37871221 | MS.gene000114:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 37867712 | 37871336 | 37867712 | ID=MS.gene000114 |
| chr1.3 | mRNA | 37867712 | 37871336 | 37867712 | ID=MS.gene000114.t1;Parent=MS.gene000114 |
| chr1.3 | exon | 37867712 | 37867778 | 37867712 | ID=MS.gene000114.t1.exon1;Parent=MS.gene000114.t1 |
| chr1.3 | CDS | 37867712 | 37867778 | 37867712 | ID=cds.MS.gene000114.t1;Parent=MS.gene000114.t1 |
| chr1.3 | exon | 37868773 | 37868827 | 37868773 | ID=MS.gene000114.t1.exon2;Parent=MS.gene000114.t1 |
| chr1.3 | CDS | 37868773 | 37868827 | 37868773 | ID=cds.MS.gene000114.t1;Parent=MS.gene000114.t1 |
| chr1.3 | exon | 37870586 | 37871336 | 37870586 | ID=MS.gene000114.t1.exon3;Parent=MS.gene000114.t1 |
| chr1.3 | CDS | 37870586 | 37871336 | 37870586 | ID=cds.MS.gene000114.t1;Parent=MS.gene000114.t1 |
| Gene Sequence |
| Protein sequence |
