Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000259.t1 | XP_003626693.1 | 84.3 | 337 | 43 | 3 | 1 | 337 | 1 | 327 | 6.70E-130 | 473.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000259.t1 | Q8GXL3 | 64.9 | 188 | 50 | 5 | 139 | 320 | 134 | 311 | 3.2e-56 | 220.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000259.t1 | G7LBJ7 | 84.3 | 337 | 43 | 3 | 1 | 337 | 1 | 327 | 4.8e-130 | 473.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene000259.t1 | TF | SBP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000259.t1 | MTR_8g005960 | 91.950 | 323 | 12 | 5 | 1 | 321 | 1 | 311 | 0.0 | 572 |
MS.gene000259.t1 | MTR_2g078770 | 67.045 | 88 | 29 | 0 | 184 | 271 | 45 | 132 | 5.76e-36 | 128 |
MS.gene000259.t1 | MTR_8g463140 | 70.000 | 90 | 26 | 1 | 195 | 284 | 63 | 151 | 1.52e-35 | 127 |
MS.gene000259.t1 | MTR_4g088555 | 72.619 | 84 | 22 | 1 | 189 | 271 | 54 | 137 | 3.97e-35 | 125 |
MS.gene000259.t1 | MTR_1g086250 | 48.649 | 148 | 63 | 3 | 124 | 271 | 87 | 221 | 5.20e-35 | 135 |
MS.gene000259.t1 | MTR_2g046550 | 52.419 | 124 | 53 | 2 | 157 | 280 | 104 | 221 | 1.17e-34 | 134 |
MS.gene000259.t1 | MTR_7g444860 | 67.857 | 84 | 27 | 0 | 190 | 273 | 142 | 225 | 2.11e-34 | 128 |
MS.gene000259.t1 | MTR_1g053715 | 50.781 | 128 | 50 | 1 | 158 | 272 | 22 | 149 | 4.05e-34 | 128 |
MS.gene000259.t1 | MTR_3g085180 | 54.472 | 123 | 49 | 2 | 157 | 272 | 118 | 240 | 9.67e-34 | 129 |
MS.gene000259.t1 | MTR_7g092930 | 67.857 | 84 | 27 | 0 | 187 | 270 | 58 | 141 | 1.83e-33 | 126 |
MS.gene000259.t1 | MTR_7g110320 | 49.624 | 133 | 59 | 2 | 139 | 271 | 95 | 219 | 3.10e-33 | 130 |
MS.gene000259.t1 | MTR_2g014200 | 67.470 | 83 | 27 | 0 | 189 | 271 | 56 | 138 | 3.67e-33 | 120 |
MS.gene000259.t1 | MTR_4g109770 | 70.370 | 81 | 24 | 0 | 192 | 272 | 118 | 198 | 4.20e-33 | 128 |
MS.gene000259.t1 | MTR_2g461920 | 72.368 | 76 | 21 | 0 | 197 | 272 | 171 | 246 | 4.96e-33 | 128 |
MS.gene000259.t1 | MTR_7g110320 | 55.932 | 118 | 44 | 2 | 154 | 271 | 110 | 219 | 5.77e-33 | 129 |
MS.gene000259.t1 | MTR_5g046670 | 61.458 | 96 | 33 | 1 | 177 | 272 | 228 | 319 | 7.06e-33 | 127 |
MS.gene000259.t1 | MTR_1g035010 | 55.000 | 120 | 43 | 1 | 153 | 272 | 71 | 179 | 1.11e-32 | 129 |
MS.gene000259.t1 | MTR_8g096780 | 51.938 | 129 | 55 | 2 | 160 | 288 | 66 | 187 | 1.16e-31 | 122 |
MS.gene000259.t1 | MTR_3g099080 | 68.421 | 76 | 24 | 0 | 197 | 272 | 98 | 173 | 3.77e-30 | 118 |
MS.gene000259.t1 | MTR_7g028740 | 62.651 | 83 | 31 | 0 | 192 | 274 | 72 | 154 | 1.21e-29 | 117 |
MS.gene000259.t1 | MTR_8g080690 | 64.103 | 78 | 28 | 0 | 195 | 272 | 149 | 226 | 2.44e-28 | 113 |
MS.gene000259.t1 | MTR_8g080670 | 50.442 | 113 | 51 | 2 | 157 | 269 | 127 | 234 | 1.48e-27 | 112 |
MS.gene000259.t1 | MTR_8g080680 | 45.902 | 122 | 53 | 2 | 161 | 270 | 85 | 205 | 2.37e-25 | 105 |
MS.gene000259.t1 | MTR_2g020620 | 59.375 | 64 | 26 | 0 | 207 | 270 | 100 | 163 | 5.10e-19 | 88.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000259.t1 | AT1G02065 | 44.970 | 338 | 143 | 8 | 1 | 321 | 1 | 312 | 5.39e-81 | 249 |
MS.gene000259.t1 | AT1G02065 | 43.874 | 253 | 115 | 4 | 1 | 244 | 1 | 235 | 7.58e-60 | 192 |
MS.gene000259.t1 | AT1G69170 | 53.543 | 127 | 52 | 3 | 144 | 270 | 78 | 197 | 2.53e-34 | 130 |
MS.gene000259.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 137 | 272 | 105 | 251 | 4.27e-34 | 128 |
MS.gene000259.t1 | AT1G20980 | 57.627 | 118 | 49 | 1 | 157 | 274 | 81 | 197 | 4.31e-34 | 133 |
MS.gene000259.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 137 | 272 | 105 | 251 | 8.28e-34 | 129 |
MS.gene000259.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 137 | 272 | 105 | 251 | 8.28e-34 | 129 |
MS.gene000259.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 137 | 272 | 105 | 251 | 8.28e-34 | 129 |
MS.gene000259.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 137 | 272 | 105 | 251 | 8.28e-34 | 129 |
MS.gene000259.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 137 | 272 | 105 | 251 | 8.28e-34 | 129 |
MS.gene000259.t1 | AT1G27370 | 47.368 | 152 | 59 | 3 | 137 | 272 | 105 | 251 | 8.28e-34 | 129 |
MS.gene000259.t1 | AT2G47070 | 73.333 | 75 | 20 | 0 | 197 | 271 | 106 | 180 | 3.54e-33 | 130 |
MS.gene000259.t1 | AT3G60030 | 54.545 | 121 | 44 | 3 | 156 | 276 | 96 | 205 | 3.59e-33 | 130 |
MS.gene000259.t1 | AT1G76580 | 71.250 | 80 | 23 | 0 | 193 | 272 | 110 | 189 | 4.08e-33 | 130 |
MS.gene000259.t1 | AT1G76580 | 71.250 | 80 | 23 | 0 | 193 | 272 | 110 | 189 | 4.18e-33 | 130 |
MS.gene000259.t1 | AT1G76580 | 71.250 | 80 | 23 | 0 | 193 | 272 | 110 | 189 | 6.14e-33 | 129 |
MS.gene000259.t1 | AT2G33810 | 67.073 | 82 | 27 | 0 | 190 | 271 | 47 | 128 | 6.93e-33 | 119 |
MS.gene000259.t1 | AT5G43270 | 51.471 | 136 | 49 | 3 | 157 | 278 | 118 | 250 | 1.72e-32 | 125 |
MS.gene000259.t1 | AT5G43270 | 51.471 | 136 | 49 | 3 | 157 | 278 | 118 | 250 | 1.72e-32 | 125 |
MS.gene000259.t1 | AT5G43270 | 51.471 | 136 | 49 | 3 | 157 | 278 | 118 | 250 | 1.72e-32 | 125 |
MS.gene000259.t1 | AT1G53160 | 60.606 | 99 | 35 | 2 | 182 | 276 | 35 | 133 | 2.85e-32 | 119 |
MS.gene000259.t1 | AT1G53160 | 62.766 | 94 | 31 | 2 | 187 | 276 | 40 | 133 | 4.77e-32 | 118 |
MS.gene000259.t1 | AT1G53160 | 62.766 | 94 | 31 | 2 | 187 | 276 | 40 | 133 | 4.77e-32 | 118 |
MS.gene000259.t1 | AT3G57920 | 56.140 | 114 | 44 | 2 | 159 | 272 | 27 | 134 | 8.97e-32 | 122 |
MS.gene000259.t1 | AT1G27360 | 45.890 | 146 | 69 | 2 | 137 | 272 | 105 | 250 | 3.77e-31 | 121 |
MS.gene000259.t1 | AT1G27360 | 45.890 | 146 | 69 | 2 | 137 | 272 | 105 | 250 | 3.77e-31 | 121 |
MS.gene000259.t1 | AT1G27360 | 45.890 | 146 | 69 | 2 | 137 | 272 | 105 | 250 | 3.77e-31 | 121 |
MS.gene000259.t1 | AT1G27360 | 45.890 | 146 | 69 | 2 | 137 | 272 | 105 | 250 | 3.77e-31 | 121 |
MS.gene000259.t1 | AT5G50670 | 60.714 | 84 | 33 | 0 | 189 | 272 | 93 | 176 | 7.29e-30 | 117 |
MS.gene000259.t1 | AT5G50670 | 60.714 | 84 | 33 | 0 | 189 | 272 | 93 | 176 | 7.29e-30 | 117 |
MS.gene000259.t1 | AT5G50570 | 60.714 | 84 | 33 | 0 | 189 | 272 | 93 | 176 | 7.29e-30 | 117 |
MS.gene000259.t1 | AT5G50570 | 60.714 | 84 | 33 | 0 | 189 | 272 | 93 | 176 | 7.29e-30 | 117 |
MS.gene000259.t1 | AT2G42200 | 66.667 | 78 | 26 | 0 | 195 | 272 | 72 | 149 | 1.19e-29 | 117 |
MS.gene000259.t1 | AT3G15270 | 54.639 | 97 | 41 | 1 | 175 | 271 | 44 | 137 | 7.25e-29 | 110 |
MS.gene000259.t1 | AT5G18830 | 46.316 | 95 | 51 | 0 | 176 | 270 | 117 | 211 | 2.92e-22 | 98.2 |
MS.gene000259.t1 | AT5G18830 | 46.316 | 95 | 51 | 0 | 176 | 270 | 117 | 211 | 3.22e-22 | 98.2 |
MS.gene000259.t1 | AT5G18830 | 46.316 | 95 | 51 | 0 | 176 | 270 | 117 | 211 | 3.50e-22 | 98.2 |
MS.gene000259.t1 | AT2G47070 | 72.549 | 51 | 14 | 0 | 221 | 271 | 1 | 51 | 9.78e-19 | 87.8 |
Find 135 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGAATATCTTGAGTATT+TGG | 0.246735 | 8.3:-81918652 | None:intergenic |
CTGTTAACATCCTCGGATTT+TGG | 0.256271 | 8.3:-81917534 | None:intergenic |
CTTGAAGTTGTTGAAGGGCT+TGG | 0.266098 | 8.3:-81918957 | None:intergenic |
GGAGTTGTTGTCTTCATTTC+CGG | 0.269715 | 8.3:-81917157 | None:intergenic |
CTCTCCCTTGACCCTCTTCC+TGG | 0.270502 | 8.3:+81917474 | MS.gene000259:CDS |
TACCTTAACGGACCTGGTTC+TGG | 0.277856 | 8.3:+81917258 | MS.gene000259:CDS |
CTTCTATCTGAGTTTGATAA+TGG | 0.278524 | 8.3:+81918568 | MS.gene000259:CDS |
ATCACAACCTGCTGCATTGC+TGG | 0.295297 | 8.3:-81917827 | None:intergenic |
TCTAGAGCCCACGAAGTCTA+TGG | 0.307240 | 8.3:-81917559 | None:intergenic |
GCTGGGCCTGTTGGCTAAAC+TGG | 0.307370 | 8.3:-81917350 | None:intergenic |
CCGGTAAGCATGATGTTTGT+TGG | 0.322804 | 8.3:-81917138 | None:intergenic |
GCAGCCACCGTCGTTGCAGC+TGG | 0.327647 | 8.3:+81917786 | MS.gene000259:CDS |
TTCGAACTCGCCTCGGTGTC+AGG | 0.329019 | 8.3:+81917686 | MS.gene000259:CDS |
TTGAAGTTGTTGAAGGGCTT+GGG | 0.330690 | 8.3:-81918956 | None:intergenic |
CCAACAAACATCATGCTTAC+CGG | 0.358315 | 8.3:+81917138 | MS.gene000259:CDS |
TGTGAATATCTTGAGTATTT+GGG | 0.361532 | 8.3:-81918651 | None:intergenic |
TTGTTGAAGGGCTTGGGCTT+TGG | 0.370317 | 8.3:-81918950 | None:intergenic |
GAAGGATCCCCGCCAGAGTC+TGG | 0.374246 | 8.3:+81918861 | MS.gene000259:intron |
GGCTAAACTGGTTGTGGTGG+TGG | 0.378995 | 8.3:-81917338 | None:intergenic |
TCGGTCTAGACCACCTGAAC+CGG | 0.380874 | 8.3:+81917650 | MS.gene000259:CDS |
GGAGGTTGTGGTTGAGGTGG+AGG | 0.381025 | 8.3:-81917444 | None:intergenic |
GAACCTGTCGAACCCGGTTC+AGG | 0.386932 | 8.3:-81917663 | None:intergenic |
ATGGAAGGAGGTTGTGGTTG+AGG | 0.388721 | 8.3:-81917450 | None:intergenic |
TTATCCGACAACTACCTTAA+CGG | 0.399307 | 8.3:+81917246 | MS.gene000259:CDS |
AATTTGACGGTGGGCTTGAT+CGG | 0.400326 | 8.3:-81917196 | None:intergenic |
ACTGGTTGTGGTGGTGGTGG+TGG | 0.404162 | 8.3:-81917332 | None:intergenic |
CGGTAAGCATGATGTTTGTT+GGG | 0.413507 | 8.3:-81917137 | None:intergenic |
TGCAACGACGGTGGCTGCCT+TGG | 0.421484 | 8.3:-81917781 | None:intergenic |
CGAAGAAGGACTGATGGATA+TGG | 0.430604 | 8.3:-81917377 | None:intergenic |
GAGAGCATGGAAGGAGGTTG+TGG | 0.432257 | 8.3:-81917456 | None:intergenic |
TCACAAATCTCACAATACTT+TGG | 0.434049 | 8.3:+81918669 | MS.gene000259:CDS |
TAAACTGGTTGTGGTGGTGG+TGG | 0.440642 | 8.3:-81917335 | None:intergenic |
CAAAATCCGAGGATGTTAAC+AGG | 0.446882 | 8.3:+81917535 | MS.gene000259:CDS |
ACTGATGGATATGGTGCTGC+TGG | 0.447816 | 8.3:-81917368 | None:intergenic |
TTCGACCCACGGGCTTTCCA+TGG | 0.449008 | 8.3:+81917396 | MS.gene000259:CDS |
ATTGAGCTTGAAGTTGTTGA+AGG | 0.454327 | 8.3:-81918963 | None:intergenic |
GACAGTGGCGGTTTCTCCAC+CGG | 0.454790 | 8.3:+81918905 | MS.gene000259:CDS |
CTTGACCCTCTTCCTGGTCA+TGG | 0.462725 | 8.3:+81917480 | MS.gene000259:CDS |
GTCCAGAACCAGGTCCGTTA+AGG | 0.463925 | 8.3:-81917260 | None:intergenic |
GAGACATGTTGGACTATGAA+TGG | 0.466941 | 8.3:+81917109 | None:intergenic |
CCACAACCAGTTTAGCCAAC+AGG | 0.466999 | 8.3:+81917344 | MS.gene000259:CDS |
TATGGTGCTGCTGGGCCTGT+TGG | 0.478607 | 8.3:-81917359 | None:intergenic |
CATGGACATGGACATGGCCC+TGG | 0.481738 | 8.3:+81917498 | MS.gene000259:CDS |
TTTGGTACGAGGAGGAATCC+AGG | 0.482460 | 8.3:-81917516 | None:intergenic |
GACTTCGTGGGCTCTAGACT+TGG | 0.484947 | 8.3:+81917564 | MS.gene000259:CDS |
CCACCTGAACCGGGTTCGAC+AGG | 0.485330 | 8.3:+81917660 | MS.gene000259:CDS |
ATCGGAGGCTGCTGCTGCGG+CGG | 0.485623 | 8.3:-81917178 | None:intergenic |
TTGCAATGCTGATCTATCTC+AGG | 0.487614 | 8.3:+81917716 | MS.gene000259:CDS |
AGACATGTTGGACTATGAAT+GGG | 0.488109 | 8.3:+81917110 | None:intergenic |
TATCAAACTCAGATAGAAGA+TGG | 0.491198 | 8.3:-81918564 | None:intergenic |
GGTTCTGCCAGCAATGCAGC+AGG | 0.491828 | 8.3:+81917820 | MS.gene000259:CDS |
GGGTCAAGGGAGAGCATGGA+AGG | 0.493307 | 8.3:-81917465 | None:intergenic |
ATTGAGTTCCAGACTCTGGC+GGG | 0.495092 | 8.3:-81918869 | None:intergenic |
TAGATCAGCATTGCAACCTT+CGG | 0.495851 | 8.3:-81917709 | None:intergenic |
CCTCTTCCTGGTCATGGACA+TGG | 0.496987 | 8.3:+81917486 | MS.gene000259:CDS |
ACCCACGGGCTTTCCATGGT+GGG | 0.498666 | 8.3:+81917400 | MS.gene000259:CDS |
GCGGCTCACGAAGTCGTCTT+CGG | 0.499397 | 8.3:-81917619 | None:intergenic |
ATCAGTCCTTCTTCGACCCA+CGG | 0.500041 | 8.3:+81917385 | MS.gene000259:CDS |
CCTGGTCATGGACATGGACA+TGG | 0.500096 | 8.3:+81917492 | MS.gene000259:CDS |
CACAAACTTTGTGGCGGCGG+TGG | 0.502474 | 8.3:-81917749 | None:intergenic |
CCTGTTGGCTAAACTGGTTG+TGG | 0.506457 | 8.3:-81917344 | None:intergenic |
AAGAGGGTCAAGGGAGAGCA+TGG | 0.508675 | 8.3:-81917469 | None:intergenic |
GAAAGCCCGTGGGTCGAAGA+AGG | 0.515436 | 8.3:-81917391 | None:intergenic |
GAAGGAGGTTGTGGTTGAGG+TGG | 0.517345 | 8.3:-81917447 | None:intergenic |
TCAGTCCTTCTTCGACCCAC+GGG | 0.517839 | 8.3:+81917386 | MS.gene000259:CDS |
GACCCACGGGCTTTCCATGG+TGG | 0.520528 | 8.3:+81917399 | MS.gene000259:CDS |
GTGGTCTAGACCGACGGTAA+AGG | 0.522892 | 8.3:-81917641 | None:intergenic |
AGTGAAACTCACAAACTTTG+TGG | 0.531020 | 8.3:-81917758 | None:intergenic |
TCTAGACTTGGACTCAACCT+TGG | 0.532282 | 8.3:+81917576 | MS.gene000259:CDS |
ACGTAGCTGCAGGAAGAGAT+TGG | 0.533276 | 8.3:+81918594 | MS.gene000259:CDS |
CAGGTTCTTCGAACTCGCCT+CGG | 0.534022 | 8.3:+81917679 | MS.gene000259:CDS |
TCGATGGTGGGTCCAGAACC+AGG | 0.538732 | 8.3:-81917270 | None:intergenic |
AGGTCCGTTAAGGTAGTTGT+CGG | 0.538800 | 8.3:-81917250 | None:intergenic |
ATCACCACTGTTTATGTCGA+TGG | 0.538976 | 8.3:-81917286 | None:intergenic |
ATCTACATCGTCGGTGACAG+TGG | 0.539420 | 8.3:+81918890 | MS.gene000259:CDS |
GACCTTTGTCGAAAATAATC+CGG | 0.539450 | 8.3:-81918924 | None:intergenic |
TTGATCGGAGGCTGCTGCTG+CGG | 0.542405 | 8.3:-81917181 | None:intergenic |
TAACAGGCCCATAGACTTCG+TGG | 0.543723 | 8.3:+81917551 | MS.gene000259:CDS |
CTAGAGCCCACGAAGTCTAT+GGG | 0.544298 | 8.3:-81917558 | None:intergenic |
TATGGGCCTGTTAACATCCT+CGG | 0.547316 | 8.3:-81917541 | None:intergenic |
CCATGTCCATGTCCATGACC+AGG | 0.547483 | 8.3:-81917492 | None:intergenic |
AGTCAACCCAGCTGCAACGA+CGG | 0.547853 | 8.3:-81917793 | None:intergenic |
CAGCCACCGTCGTTGCAGCT+GGG | 0.549496 | 8.3:+81917787 | MS.gene000259:CDS |
CCATGTCCATGACCAGGAAG+AGG | 0.550701 | 8.3:-81917486 | None:intergenic |
ATAATGGAAAACGTAGCTGC+AGG | 0.553645 | 8.3:+81918584 | MS.gene000259:CDS |
CTGATGGATATGGTGCTGCT+GGG | 0.553703 | 8.3:-81917367 | None:intergenic |
TTGAGCTTGAAGTTGTTGAA+GGG | 0.561199 | 8.3:-81918962 | None:intergenic |
ACTCACAAACTTTGTGGCGG+CGG | 0.568304 | 8.3:-81917752 | None:intergenic |
GTGGTCGAAAATTTGACGGT+GGG | 0.570524 | 8.3:-81917205 | None:intergenic |
CGTAGTGGTCGAAAATTTGA+CGG | 0.570580 | 8.3:-81917209 | None:intergenic |
CATGACCAGGAAGAGGGTCA+AGG | 0.572330 | 8.3:-81917479 | None:intergenic |
TCGCCTCGGTGTCAGGCCGA+AGG | 0.572523 | 8.3:+81917693 | MS.gene000259:CDS |
TCGTGAGCCGCCTTTACCGT+CGG | 0.573246 | 8.3:+81917631 | MS.gene000259:CDS |
GTAGATTGAGTTCCAGACTC+TGG | 0.579544 | 8.3:-81918873 | None:intergenic |
GAGGTTGTGGTTGAGGTGGA+GGG | 0.580574 | 8.3:-81917443 | None:intergenic |
ATGACCAGGAAGAGGGTCAA+GGG | 0.581128 | 8.3:-81917478 | None:intergenic |
TTCGAAGAACCTGTCGAACC+CGG | 0.581830 | 8.3:-81917669 | None:intergenic |
ACCACTGTTTATGTCGATGG+TGG | 0.584036 | 8.3:-81917283 | None:intergenic |
GTGGGTCGAAGAAGGACTGA+TGG | 0.584810 | 8.3:-81917383 | None:intergenic |
GACAACTACCTTAACGGACC+TGG | 0.585890 | 8.3:+81917252 | MS.gene000259:CDS |
GTTGGCTAAACTGGTTGTGG+TGG | 0.586100 | 8.3:-81917341 | None:intergenic |
CCTGTCGAACCCGGTTCAGG+TGG | 0.588152 | 8.3:-81917660 | None:intergenic |
TGGCTGATCATAATCGTCGC+AGG | 0.588393 | 8.3:+81918614 | MS.gene000259:CDS |
CGGTCTAGACCACCTGAACC+GGG | 0.589283 | 8.3:+81917651 | MS.gene000259:CDS |
AGAAGTATGTGCGGCCACCA+AGG | 0.589908 | 8.3:-81917593 | None:intergenic |
GACCCACCATGGAAAGCCCG+TGG | 0.597023 | 8.3:-81917402 | None:intergenic |
CCACTGTTTATGTCGATGGT+GGG | 0.597970 | 8.3:-81917282 | None:intergenic |
AGACTTGGACTCAACCTTGG+TGG | 0.599617 | 8.3:+81917579 | MS.gene000259:CDS |
TTGACGGTGGGCTTGATCGG+AGG | 0.603910 | 8.3:-81917193 | None:intergenic |
TTGCAGCTGGGTTGACTCAG+CGG | 0.610713 | 8.3:+81917799 | MS.gene000259:CDS |
TCAAGGGAGAGCATGGAAGG+AGG | 0.612363 | 8.3:-81917462 | None:intergenic |
TTGGTACGAGGAGGAATCCA+GGG | 0.615728 | 8.3:-81917515 | None:intergenic |
GTCTAGACCGACGGTAAAGG+CGG | 0.615862 | 8.3:-81917638 | None:intergenic |
AGTTTGTGAGTTTCACTCCA+AGG | 0.619014 | 8.3:+81917764 | MS.gene000259:CDS |
TACATCGTCGGTGACAGTGG+CGG | 0.620396 | 8.3:+81918893 | MS.gene000259:CDS |
CATGTCCATGACCAGGAAGA+GGG | 0.620462 | 8.3:-81917485 | None:intergenic |
GATTGAGTTCCAGACTCTGG+CGG | 0.626944 | 8.3:-81918870 | None:intergenic |
AAGCAGTTGATGACCCACCA+TGG | 0.631764 | 8.3:-81917413 | None:intergenic |
TGGAACTCAATCTACATCGT+CGG | 0.632089 | 8.3:+81918881 | MS.gene000259:CDS |
CAACCCAGCTGCAACGACGG+TGG | 0.640932 | 8.3:-81917790 | None:intergenic |
GTTCAGGTGGTCTAGACCGA+CGG | 0.647783 | 8.3:-81917647 | None:intergenic |
AACAGGCCCATAGACTTCGT+GGG | 0.651739 | 8.3:+81917552 | MS.gene000259:CDS |
GCGTACGTAGGTTCACTACC+CGG | 0.662915 | 8.3:-81918997 | None:intergenic |
CCTCCTCGTACCAAAATCCG+AGG | 0.665794 | 8.3:+81917524 | MS.gene000259:CDS |
ACCCACCATGGAAAGCCCGT+GGG | 0.668555 | 8.3:-81917401 | None:intergenic |
AGTGGTCGAAAATTTGACGG+TGG | 0.671593 | 8.3:-81917206 | None:intergenic |
ACATAGCTTGAGAAGCGTAG+TGG | 0.674169 | 8.3:-81917224 | None:intergenic |
GACATGTTGGACTATGAATG+GGG | 0.677368 | 8.3:+81917111 | None:intergenic |
GAAACTCACAAACTTTGTGG+CGG | 0.681714 | 8.3:-81917755 | None:intergenic |
CTTTGTCGAAAATAATCCGG+TGG | 0.682961 | 8.3:-81918921 | None:intergenic |
CAACCTTCGGCCTGACACCG+AGG | 0.715496 | 8.3:-81917696 | None:intergenic |
TTGAGTTCCAGACTCTGGCG+GGG | 0.723001 | 8.3:-81918868 | None:intergenic |
CTTCGGAAGAGAAGTATGTG+CGG | 0.729099 | 8.3:-81917602 | None:intergenic |
CCCACCATCGACATAAACAG+TGG | 0.734841 | 8.3:+81917282 | MS.gene000259:CDS |
TACGTAGGTTCACTACCCGG+TGG | 0.763199 | 8.3:-81918994 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACATAAATAAATATATATGC+AGG | + | chr8.3:81918539-81918558 | MS.gene000259:intron | 15.0% |
!! | ATTCTATTTAACCAAAAATA+AGG | + | chr8.3:81918785-81918804 | MS.gene000259:intron | 15.0% |
!! | TTCTATTTAACCAAAAATAA+GGG | + | chr8.3:81918786-81918805 | MS.gene000259:intron | 15.0% |
!!! | ATTTTCTTAATCAATTACTT+TGG | + | chr8.3:81918710-81918729 | MS.gene000259:intron | 15.0% |
!!! | TGATTTGTTTTTTATTTTGA+AGG | + | chr8.3:81918843-81918862 | MS.gene000259:intron | 15.0% |
!! | AAAATACACATCTTAATCAA+AGG | - | chr8.3:81918085-81918104 | None:intergenic | 20.0% |
!! | TTGATTAAGAAAATTACTTG+TGG | - | chr8.3:81918704-81918723 | None:intergenic | 20.0% |
!!! | TGAGTTAGGTTTTAATTAAA+CGG | + | chr8.3:81918020-81918039 | MS.gene000259:intron | 20.0% |
!!! | TTGATTAAGATGTGTATTTT+GGG | + | chr8.3:81918085-81918104 | MS.gene000259:intron | 20.0% |
!!! | TTTGATTAAGATGTGTATTT+TGG | + | chr8.3:81918084-81918103 | MS.gene000259:intron | 20.0% |
! | ACTTATCATAAGCATGATTA+TGG | + | chr8.3:81918813-81918832 | MS.gene000259:intron | 25.0% |
! | TGTGAATATCTTGAGTATTT+GGG | - | chr8.3:81918654-81918673 | None:intergenic | 25.0% |
! | TTGTGAATATCTTGAGTATT+TGG | - | chr8.3:81918655-81918674 | None:intergenic | 25.0% |
!! | AACTTGTGTTAATTTGAGTT+AGG | + | chr8.3:81918006-81918025 | MS.gene000259:intron | 25.0% |
!! | AGTGAGTAGTATATGTTTTA+AGG | - | chr8.3:81918292-81918311 | None:intergenic | 25.0% |
!! | TCAATGATTGAGTTGTTAAA+GGG | - | chr8.3:81917872-81917891 | None:intergenic | 25.0% |
!!! | ATAAGTAACTCCCTTATTTT+TGG | - | chr8.3:81918799-81918818 | None:intergenic | 25.0% |
!!! | GTGAGTAGTATATGTTTTAA+GGG | - | chr8.3:81918291-81918310 | None:intergenic | 25.0% |
!!! | TGTTGTTTAATTTGCACTTA+TGG | - | chr8.3:81917975-81917994 | None:intergenic | 25.0% |
!!! | TTTAATTTGCACTTATGGTA+TGG | - | chr8.3:81917970-81917989 | None:intergenic | 25.0% |
AAGGTTGGATTCAAAAAAGA+CGG | + | chr8.3:81918188-81918207 | MS.gene000259:intron | 30.0% | |
CTTCTATCTGAGTTTGATAA+TGG | + | chr8.3:81918568-81918587 | MS.gene000259:CDS | 30.0% | |
TATCAAACTCAGATAGAAGA+TGG | - | chr8.3:81918567-81918586 | None:intergenic | 30.0% | |
TCACAAATCTCACAATACTT+TGG | + | chr8.3:81918669-81918688 | MS.gene000259:CDS | 30.0% | |
! | CAATGATTGAGTTGTTAAAG+GGG | - | chr8.3:81917871-81917890 | None:intergenic | 30.0% |
! | CTCAATGATTGAGTTGTTAA+AGG | - | chr8.3:81917873-81917892 | None:intergenic | 30.0% |
!! | TACTACTCACTTAGTTTGTT+TGG | + | chr8.3:81918301-81918320 | MS.gene000259:intron | 30.0% |
!!! | GGTTTTAAAAACGTGTATGA+GGG | + | chr8.3:81918106-81918125 | MS.gene000259:intron | 30.0% |
AGTGAAACTCACAAACTTTG+TGG | - | chr8.3:81917761-81917780 | None:intergenic | 35.0% | |
ATTGAGCTTGAAGTTGTTGA+AGG | - | chr8.3:81918966-81918985 | None:intergenic | 35.0% | |
ATTTCTGTTCCTCACTTCAA+GGG | + | chr8.3:81917905-81917924 | MS.gene000259:intron | 35.0% | |
GACCTTTGTCGAAAATAATC+CGG | - | chr8.3:81918927-81918946 | None:intergenic | 35.0% | |
TTATCCGACAACTACCTTAA+CGG | + | chr8.3:81917246-81917265 | MS.gene000259:CDS | 35.0% | |
TTGAGCTTGAAGTTGTTGAA+GGG | - | chr8.3:81918965-81918984 | None:intergenic | 35.0% | |
! | TATTTCTGTTCCTCACTTCA+AGG | + | chr8.3:81917904-81917923 | MS.gene000259:intron | 35.0% |
!!! | GCTGTGTTGTTTTGTTTGAA+TGG | - | chr8.3:81918386-81918405 | None:intergenic | 35.0% |
!!! | GGGTTTTAAAAACGTGTATG+AGG | + | chr8.3:81918105-81918124 | MS.gene000259:intron | 35.0% |
AAAAGACGGAAATACCCTTG+AGG | + | chr8.3:81918202-81918221 | MS.gene000259:intron | 40.0% | |
AAAGACGGAAATACCCTTGA+GGG | + | chr8.3:81918203-81918222 | MS.gene000259:intron | 40.0% | |
AGTAAGCAAGCACAAAACAG+CGG | + | chr8.3:81918147-81918166 | MS.gene000259:intron | 40.0% | |
AGTTGACCGTACATTACATG+GGG | + | chr8.3:81918244-81918263 | MS.gene000259:intron | 40.0% | |
AGTTTGTGAGTTTCACTCCA+AGG | + | chr8.3:81917764-81917783 | MS.gene000259:CDS | 40.0% | |
ATCACCACTGTTTATGTCGA+TGG | - | chr8.3:81917289-81917308 | None:intergenic | 40.0% | |
CAAAATCCGAGGATGTTAAC+AGG | + | chr8.3:81917535-81917554 | MS.gene000259:CDS | 40.0% | |
CCAACAAACATCATGCTTAC+CGG | + | chr8.3:81917138-81917157 | MS.gene000259:CDS | 40.0% | |
CGGTAAGCATGATGTTTGTT+GGG | - | chr8.3:81917140-81917159 | None:intergenic | 40.0% | |
CGTAGTGGTCGAAAATTTGA+CGG | - | chr8.3:81917212-81917231 | None:intergenic | 40.0% | |
CTTTGTCGAAAATAATCCGG+TGG | - | chr8.3:81918924-81918943 | None:intergenic | 40.0% | |
GAAACTCACAAACTTTGTGG+CGG | - | chr8.3:81917758-81917777 | None:intergenic | 40.0% | |
GAGTTGACCGTACATTACAT+GGG | + | chr8.3:81918243-81918262 | MS.gene000259:intron | 40.0% | |
GGAGTTGTTGTCTTCATTTC+CGG | - | chr8.3:81917160-81917179 | None:intergenic | 40.0% | |
GGATTTCCCCATGTAATGTA+CGG | - | chr8.3:81918253-81918272 | None:intergenic | 40.0% | |
TAGATCAGCATTGCAACCTT+CGG | - | chr8.3:81917712-81917731 | None:intergenic | 40.0% | |
TGGAACTCAATCTACATCGT+CGG | + | chr8.3:81918881-81918900 | MS.gene000259:CDS | 40.0% | |
TTGAAGTTGTTGAAGGGCTT+GGG | - | chr8.3:81918959-81918978 | None:intergenic | 40.0% | |
TTGCAATGCTGATCTATCTC+AGG | + | chr8.3:81917716-81917735 | MS.gene000259:CDS | 40.0% | |
! | AGCTCAATGTTTTTCTCCAC+CGG | + | chr8.3:81918978-81918997 | MS.gene000259:CDS | 40.0% |
! | ATAATGGAAAACGTAGCTGC+AGG | + | chr8.3:81918584-81918603 | MS.gene000259:CDS | 40.0% |
! | CACCGGATTATTTTCGACAA+AGG | + | chr8.3:81918922-81918941 | MS.gene000259:CDS | 40.0% |
! | CTGTTAACATCCTCGGATTT+TGG | - | chr8.3:81917537-81917556 | None:intergenic | 40.0% |
! | TGAGTTGACCGTACATTACA+TGG | + | chr8.3:81918242-81918261 | MS.gene000259:intron | 40.0% |
AAGACGGAAATACCCTTGAG+GGG | + | chr8.3:81918204-81918223 | MS.gene000259:intron | 45.0% | |
AAGCACAAAACAGCGGTGTT+GGG | + | chr8.3:81918154-81918173 | MS.gene000259:intron | 45.0% | |
ACCACTGTTTATGTCGATGG+TGG | - | chr8.3:81917286-81917305 | None:intergenic | 45.0% | |
ACGAAAATGCCCTTGAAGTG+AGG | - | chr8.3:81917917-81917936 | None:intergenic | 45.0% | |
AGGTCCGTTAAGGTAGTTGT+CGG | - | chr8.3:81917253-81917272 | None:intergenic | 45.0% | |
AGTGGTCGAAAATTTGACGG+TGG | - | chr8.3:81917209-81917228 | None:intergenic | 45.0% | |
ATTACATGGGGAAATCCCGA+GGG | + | chr8.3:81918256-81918275 | MS.gene000259:intron | 45.0% | |
ATTGTCAACTCTCCCCTCAA+GGG | - | chr8.3:81918219-81918238 | None:intergenic | 45.0% | |
CCACTGTTTATGTCGATGGT+GGG | - | chr8.3:81917285-81917304 | None:intergenic | 45.0% | |
CCGGTAAGCATGATGTTTGT+TGG | - | chr8.3:81917141-81917160 | None:intergenic | 45.0% | |
CTTGAAGTTGTTGAAGGGCT+TGG | - | chr8.3:81918960-81918979 | None:intergenic | 45.0% | |
GTAGATTGAGTTCCAGACTC+TGG | - | chr8.3:81918876-81918895 | None:intergenic | 45.0% | |
GTGGTCGAAAATTTGACGGT+GGG | - | chr8.3:81917208-81917227 | None:intergenic | 45.0% | |
TATGGGCCTGTTAACATCCT+CGG | - | chr8.3:81917544-81917563 | None:intergenic | 45.0% | |
TCTAGACTTGGACTCAACCT+TGG | + | chr8.3:81917576-81917595 | MS.gene000259:CDS | 45.0% | |
TTAAGGGACACAAATGCCCT+CGG | - | chr8.3:81918275-81918294 | None:intergenic | 45.0% | |
! | AATTTGACGGTGGGCTTGAT+CGG | - | chr8.3:81917199-81917218 | None:intergenic | 45.0% |
! | ACATAGCTTGAGAAGCGTAG+TGG | - | chr8.3:81917227-81917246 | None:intergenic | 45.0% |
! | CGAAGAAGGACTGATGGATA+TGG | - | chr8.3:81917380-81917399 | None:intergenic | 45.0% |
! | CTTCGGAAGAGAAGTATGTG+CGG | - | chr8.3:81917605-81917624 | None:intergenic | 45.0% |
! | GCTCAATGTTTTTCTCCACC+GGG | + | chr8.3:81918979-81918998 | MS.gene000259:CDS | 45.0% |
!! | TAATAATAATAATAATATAG+TGG | - | chr8.3:81918458-81918477 | None:intergenic | 5.0% |
!!! | TTTTTTTTTTTTTATCAAAA+AGG | + | chr8.3:81918058-81918077 | MS.gene000259:intron | 5.0% |
AACAGGCCCATAGACTTCGT+GGG | + | chr8.3:81917552-81917571 | MS.gene000259:CDS | 50.0% | |
ACGTAGCTGCAGGAAGAGAT+TGG | + | chr8.3:81918594-81918613 | MS.gene000259:CDS | 50.0% | |
ACTCACAAACTTTGTGGCGG+CGG | - | chr8.3:81917755-81917774 | None:intergenic | 50.0% | |
AGACTTGGACTCAACCTTGG+TGG | + | chr8.3:81917579-81917598 | MS.gene000259:CDS | 50.0% | |
ATCACAACCTGCTGCATTGC+TGG | - | chr8.3:81917830-81917849 | None:intergenic | 50.0% | |
ATCAGTCCTTCTTCGACCCA+CGG | + | chr8.3:81917385-81917404 | MS.gene000259:CDS | 50.0% | |
ATCTACATCGTCGGTGACAG+TGG | + | chr8.3:81918890-81918909 | MS.gene000259:CDS | 50.0% | |
ATGACCAGGAAGAGGGTCAA+GGG | - | chr8.3:81917481-81917500 | None:intergenic | 50.0% | |
ATGGAAGGAGGTTGTGGTTG+AGG | - | chr8.3:81917453-81917472 | None:intergenic | 50.0% | |
ATTGAGTTCCAGACTCTGGC+GGG | - | chr8.3:81918872-81918891 | None:intergenic | 50.0% | |
CAAGCACAAAACAGCGGTGT+TGG | + | chr8.3:81918153-81918172 | MS.gene000259:intron | 50.0% | |
CATGTCCATGACCAGGAAGA+GGG | - | chr8.3:81917488-81917507 | None:intergenic | 50.0% | |
CATTACATGGGGAAATCCCG+AGG | + | chr8.3:81918255-81918274 | MS.gene000259:intron | 50.0% | |
CATTGTCAACTCTCCCCTCA+AGG | - | chr8.3:81918220-81918239 | None:intergenic | 50.0% | |
CCACAACCAGTTTAGCCAAC+AGG | + | chr8.3:81917344-81917363 | MS.gene000259:CDS | 50.0% | |
CCCACCATCGACATAAACAG+TGG | + | chr8.3:81917282-81917301 | MS.gene000259:CDS | 50.0% | |
CTAGAGCCCACGAAGTCTAT+GGG | - | chr8.3:81917561-81917580 | None:intergenic | 50.0% | |
GATTGAGTTCCAGACTCTGG+CGG | - | chr8.3:81918873-81918892 | None:intergenic | 50.0% | |
GTTGGCTAAACTGGTTGTGG+TGG | - | chr8.3:81917344-81917363 | None:intergenic | 50.0% | |
TAACAGGCCCATAGACTTCG+TGG | + | chr8.3:81917551-81917570 | MS.gene000259:CDS | 50.0% | |
TAAGGGACACAAATGCCCTC+GGG | - | chr8.3:81918274-81918293 | None:intergenic | 50.0% | |
TGGCTGATCATAATCGTCGC+AGG | + | chr8.3:81918614-81918633 | MS.gene000259:CDS | 50.0% | |
TTCGAAGAACCTGTCGAACC+CGG | - | chr8.3:81917672-81917691 | None:intergenic | 50.0% | |
TTGGTACGAGGAGGAATCCA+GGG | - | chr8.3:81917518-81917537 | None:intergenic | 50.0% | |
TTGTTGAAGGGCTTGGGCTT+TGG | - | chr8.3:81918953-81918972 | None:intergenic | 50.0% | |
TTTGGTACGAGGAGGAATCC+AGG | - | chr8.3:81917519-81917538 | None:intergenic | 50.0% | |
! | AGCACAAAACAGCGGTGTTG+GGG | + | chr8.3:81918155-81918174 | MS.gene000259:intron | 50.0% |
! | CCTGTTGGCTAAACTGGTTG+TGG | - | chr8.3:81917347-81917366 | None:intergenic | 50.0% |
! | GACAACTACCTTAACGGACC+TGG | + | chr8.3:81917252-81917271 | MS.gene000259:CDS | 50.0% |
! | TACCTTAACGGACCTGGTTC+TGG | + | chr8.3:81917258-81917277 | MS.gene000259:CDS | 50.0% |
! | TCTAGAGCCCACGAAGTCTA+TGG | - | chr8.3:81917562-81917581 | None:intergenic | 50.0% |
!! | AAGCAGTTGATGACCCACCA+TGG | - | chr8.3:81917416-81917435 | None:intergenic | 50.0% |
!! | ACTGATGGATATGGTGCTGC+TGG | - | chr8.3:81917371-81917390 | None:intergenic | 50.0% |
!! | CATCCTCGGATTTTGGTACG+AGG | - | chr8.3:81917530-81917549 | None:intergenic | 50.0% |
!! | CTGATGGATATGGTGCTGCT+GGG | - | chr8.3:81917370-81917389 | None:intergenic | 50.0% |
!! | TAAACTGGTTGTGGTGGTGG+TGG | - | chr8.3:81917338-81917357 | None:intergenic | 50.0% |
AAGAGGGTCAAGGGAGAGCA+TGG | - | chr8.3:81917472-81917491 | None:intergenic | 55.0% | |
AGTCAACCCAGCTGCAACGA+CGG | - | chr8.3:81917796-81917815 | None:intergenic | 55.0% | |
CAGGTTCTTCGAACTCGCCT+CGG | + | chr8.3:81917679-81917698 | MS.gene000259:CDS | 55.0% | |
CATGACCAGGAAGAGGGTCA+AGG | - | chr8.3:81917482-81917501 | None:intergenic | 55.0% | |
CCATGTCCATGACCAGGAAG+AGG | - | chr8.3:81917489-81917508 | None:intergenic | 55.0% | |
CCATGTCCATGTCCATGACC+AGG | - | chr8.3:81917495-81917514 | None:intergenic | 55.0% | |
CCTCCTCGTACCAAAATCCG+AGG | + | chr8.3:81917524-81917543 | MS.gene000259:CDS | 55.0% | |
CCTCTTCCTGGTCATGGACA+TGG | + | chr8.3:81917486-81917505 | MS.gene000259:CDS | 55.0% | |
CCTGGTCATGGACATGGACA+TGG | + | chr8.3:81917492-81917511 | MS.gene000259:CDS | 55.0% | |
CTTGACCCTCTTCCTGGTCA+TGG | + | chr8.3:81917480-81917499 | MS.gene000259:CDS | 55.0% | |
GAAGGAGGTTGTGGTTGAGG+TGG | - | chr8.3:81917450-81917469 | None:intergenic | 55.0% | |
GAGGTTGTGGTTGAGGTGGA+GGG | - | chr8.3:81917446-81917465 | None:intergenic | 55.0% | |
GGCTAAACTGGTTGTGGTGG+TGG | - | chr8.3:81917341-81917360 | None:intergenic | 55.0% | |
GTCCAGAACCAGGTCCGTTA+AGG | - | chr8.3:81917263-81917282 | None:intergenic | 55.0% | |
GTCTAGACCGACGGTAAAGG+CGG | - | chr8.3:81917641-81917660 | None:intergenic | 55.0% | |
GTGGGTCGAAGAAGGACTGA+TGG | - | chr8.3:81917386-81917405 | None:intergenic | 55.0% | |
GTGGTCTAGACCGACGGTAA+AGG | - | chr8.3:81917644-81917663 | None:intergenic | 55.0% | |
GTTCAGGTGGTCTAGACCGA+CGG | - | chr8.3:81917650-81917669 | None:intergenic | 55.0% | |
TACATCGTCGGTGACAGTGG+CGG | + | chr8.3:81918893-81918912 | MS.gene000259:CDS | 55.0% | |
TCAGTCCTTCTTCGACCCAC+GGG | + | chr8.3:81917386-81917405 | MS.gene000259:CDS | 55.0% | |
TCGGTCTAGACCACCTGAAC+CGG | + | chr8.3:81917650-81917669 | MS.gene000259:CDS | 55.0% | |
TTGAGTTCCAGACTCTGGCG+GGG | - | chr8.3:81918871-81918890 | None:intergenic | 55.0% | |
! | AAACAGCGGTGTTGGGGGAT+AGG | + | chr8.3:81918161-81918180 | MS.gene000259:intron | 55.0% |
! | AACAGCGGTGTTGGGGGATA+GGG | + | chr8.3:81918162-81918181 | MS.gene000259:intron | 55.0% |
! | AGAAGTATGTGCGGCCACCA+AGG | - | chr8.3:81917596-81917615 | None:intergenic | 55.0% |
! | GAGAGCATGGAAGGAGGTTG+TGG | - | chr8.3:81917459-81917478 | None:intergenic | 55.0% |
! | GCACAAAACAGCGGTGTTGG+GGG | + | chr8.3:81918156-81918175 | MS.gene000259:intron | 55.0% |
! | TCAAGGGAGAGCATGGAAGG+AGG | - | chr8.3:81917465-81917484 | None:intergenic | 55.0% |
! | TTGCAGCTGGGTTGACTCAG+CGG | + | chr8.3:81917799-81917818 | MS.gene000259:CDS | 55.0% |
!! | CCTCGGATTTTGGTACGAGG+AGG | - | chr8.3:81917527-81917546 | None:intergenic | 55.0% |
!! | GACTTCGTGGGCTCTAGACT+TGG | + | chr8.3:81917564-81917583 | MS.gene000259:CDS | 55.0% |
ACCCACCATGGAAAGCCCGT+GGG | - | chr8.3:81917404-81917423 | None:intergenic | 60.0% | |
ACCCACGGGCTTTCCATGGT+GGG | + | chr8.3:81917400-81917419 | MS.gene000259:CDS | 60.0% | |
CACAAACTTTGTGGCGGCGG+TGG | - | chr8.3:81917752-81917771 | None:intergenic | 60.0% | |
CATGGACATGGACATGGCCC+TGG | + | chr8.3:81917498-81917517 | MS.gene000259:CDS | 60.0% | |
CGGTCTAGACCACCTGAACC+GGG | + | chr8.3:81917651-81917670 | MS.gene000259:CDS | 60.0% | |
CTCTCCCTTGACCCTCTTCC+TGG | + | chr8.3:81917474-81917493 | MS.gene000259:CDS | 60.0% | |
GAAAGCCCGTGGGTCGAAGA+AGG | - | chr8.3:81917394-81917413 | None:intergenic | 60.0% | |
GAACCTGTCGAACCCGGTTC+AGG | - | chr8.3:81917666-81917685 | None:intergenic | 60.0% | |
GACAGTGGCGGTTTCTCCAC+CGG | + | chr8.3:81918905-81918924 | MS.gene000259:CDS | 60.0% | |
GCGGCTCACGAAGTCGTCTT+CGG | - | chr8.3:81917622-81917641 | None:intergenic | 60.0% | |
GGAGGTTGTGGTTGAGGTGG+AGG | - | chr8.3:81917447-81917466 | None:intergenic | 60.0% | |
GGTTCTGCCAGCAATGCAGC+AGG | + | chr8.3:81917820-81917839 | MS.gene000259:CDS | 60.0% | |
GTGTTGGGGGATAGGGGAGA+AGG | + | chr8.3:81918169-81918188 | MS.gene000259:intron | 60.0% | |
TCGTGAGCCGCCTTTACCGT+CGG | + | chr8.3:81917631-81917650 | MS.gene000259:CDS | 60.0% | |
TGGGGGATAGGGGAGAAGGT+TGG | + | chr8.3:81918173-81918192 | MS.gene000259:intron | 60.0% | |
TTCGACCCACGGGCTTTCCA+TGG | + | chr8.3:81917396-81917415 | MS.gene000259:CDS | 60.0% | |
TTGATCGGAGGCTGCTGCTG+CGG | - | chr8.3:81917184-81917203 | None:intergenic | 60.0% | |
! | ACAGCGGTGTTGGGGGATAG+GGG | + | chr8.3:81918163-81918182 | MS.gene000259:intron | 60.0% |
! | GCTGGGCCTGTTGGCTAAAC+TGG | - | chr8.3:81917353-81917372 | None:intergenic | 60.0% |
! | GGGTCAAGGGAGAGCATGGA+AGG | - | chr8.3:81917468-81917487 | None:intergenic | 60.0% |
! | TTGACGGTGGGCTTGATCGG+AGG | - | chr8.3:81917196-81917215 | None:intergenic | 60.0% |
!! | ACTGGTTGTGGTGGTGGTGG+TGG | - | chr8.3:81917335-81917354 | None:intergenic | 60.0% |
!! | TATGGTGCTGCTGGGCCTGT+TGG | - | chr8.3:81917362-81917381 | None:intergenic | 60.0% |
!! | TCGATGGTGGGTCCAGAACC+AGG | - | chr8.3:81917273-81917292 | None:intergenic | 60.0% |
!! | TTCGAACTCGCCTCGGTGTC+AGG | + | chr8.3:81917686-81917705 | MS.gene000259:CDS | 60.0% |
CAACCCAGCTGCAACGACGG+TGG | - | chr8.3:81917793-81917812 | None:intergenic | 65.0% | |
CAACCTTCGGCCTGACACCG+AGG | - | chr8.3:81917699-81917718 | None:intergenic | 65.0% | |
CAGCCACCGTCGTTGCAGCT+GGG | + | chr8.3:81917787-81917806 | MS.gene000259:CDS | 65.0% | |
CCACCTGAACCGGGTTCGAC+AGG | + | chr8.3:81917660-81917679 | MS.gene000259:CDS | 65.0% | |
CCTGTCGAACCCGGTTCAGG+TGG | - | chr8.3:81917663-81917682 | None:intergenic | 65.0% | |
GAAGGATCCCCGCCAGAGTC+TGG | + | chr8.3:81918861-81918880 | MS.gene000259:intron | 65.0% | |
GACCCACCATGGAAAGCCCG+TGG | - | chr8.3:81917405-81917424 | None:intergenic | 65.0% | |
GACCCACGGGCTTTCCATGG+TGG | + | chr8.3:81917399-81917418 | MS.gene000259:CDS | 65.0% | |
TGCAACGACGGTGGCTGCCT+TGG | - | chr8.3:81917784-81917803 | None:intergenic | 65.0% | |
!! | GGTTGTGGTGGTGGTGGTGG+TGG | - | chr8.3:81917332-81917351 | None:intergenic | 65.0% |
!! | TGTGGTGGTGGTGGTGGTGG+TGG | - | chr8.3:81917329-81917348 | None:intergenic | 65.0% |
ATCGGAGGCTGCTGCTGCGG+CGG | - | chr8.3:81917181-81917200 | None:intergenic | 70.0% | |
GCAGCCACCGTCGTTGCAGC+TGG | + | chr8.3:81917786-81917805 | MS.gene000259:CDS | 70.0% | |
!! | TCGCCTCGGTGTCAGGCCGA+AGG | + | chr8.3:81917693-81917712 | MS.gene000259:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 81917114 | 81919004 | 81917114 | ID=MS.gene000259 |
chr8.3 | mRNA | 81917114 | 81919004 | 81917114 | ID=MS.gene000259.t1;Parent=MS.gene000259 |
chr8.3 | exon | 81917114 | 81917841 | 81917114 | ID=MS.gene000259.t1.exon1;Parent=MS.gene000259.t1 |
chr8.3 | CDS | 81917114 | 81917841 | 81917114 | ID=cds.MS.gene000259.t1;Parent=MS.gene000259.t1 |
chr8.3 | exon | 81918561 | 81918706 | 81918561 | ID=MS.gene000259.t1.exon2;Parent=MS.gene000259.t1 |
chr8.3 | CDS | 81918561 | 81918706 | 81918561 | ID=cds.MS.gene000259.t1;Parent=MS.gene000259.t1 |
chr8.3 | exon | 81918865 | 81919004 | 81918865 | ID=MS.gene000259.t1.exon3;Parent=MS.gene000259.t1 |
chr8.3 | CDS | 81918865 | 81919004 | 81918865 | ID=cds.MS.gene000259.t1;Parent=MS.gene000259.t1 |
Gene Sequence |
Protein sequence |