Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00051.t1 | XP_013463066.1 | 98 | 297 | 6 | 0 | 1 | 297 | 1 | 297 | 1.10E-132 | 483 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00051.t1 | Q8VWK4 | 58.0 | 250 | 94 | 5 | 1 | 245 | 1 | 244 | 7.1e-69 | 262.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00051.t1 | A0A072VG04 | 98.0 | 297 | 6 | 0 | 1 | 297 | 1 | 297 | 7.7e-133 | 483.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene00051.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00051.t1 | MTR_2g031870 | 98.316 | 297 | 5 | 0 | 1 | 297 | 1 | 297 | 0.0 | 592 |
| MS.gene00051.t1 | MTR_2g031870 | 89.562 | 297 | 5 | 1 | 1 | 297 | 1 | 271 | 0.0 | 521 |
| MS.gene00051.t1 | MTR_8g494240 | 75.104 | 241 | 54 | 2 | 1 | 239 | 1 | 237 | 3.93e-127 | 365 |
| MS.gene00051.t1 | MTR_8g494240 | 75.104 | 241 | 54 | 2 | 1 | 239 | 1 | 237 | 1.02e-126 | 365 |
| MS.gene00051.t1 | MTR_8g494240 | 75.104 | 241 | 54 | 2 | 1 | 239 | 1 | 237 | 4.52e-125 | 364 |
| MS.gene00051.t1 | MTR_8g494240 | 49.550 | 111 | 26 | 3 | 4 | 114 | 305 | 385 | 5.01e-21 | 93.2 |
| MS.gene00051.t1 | MTR_8g092810 | 67.063 | 252 | 74 | 1 | 1 | 243 | 1 | 252 | 1.93e-110 | 329 |
| MS.gene00051.t1 | MTR_0095s0040 | 72.258 | 155 | 41 | 1 | 1 | 153 | 1 | 155 | 9.20e-77 | 235 |
| MS.gene00051.t1 | MTR_5g015340 | 48.548 | 241 | 111 | 6 | 1 | 236 | 1 | 233 | 1.60e-63 | 203 |
| MS.gene00051.t1 | MTR_5g015340 | 48.548 | 241 | 111 | 6 | 1 | 236 | 1 | 233 | 1.60e-63 | 203 |
| MS.gene00051.t1 | MTR_4g097130 | 44.664 | 253 | 124 | 5 | 1 | 239 | 1 | 251 | 2.01e-63 | 203 |
| MS.gene00051.t1 | MTR_4g097130 | 44.664 | 253 | 124 | 5 | 1 | 239 | 1 | 251 | 3.29e-63 | 203 |
| MS.gene00051.t1 | MTR_4g097130 | 43.411 | 258 | 125 | 5 | 1 | 239 | 1 | 256 | 7.21e-62 | 199 |
| MS.gene00051.t1 | MTR_5g015340 | 48.548 | 241 | 111 | 6 | 1 | 236 | 1 | 233 | 1.45e-61 | 201 |
| MS.gene00051.t1 | MTR_1g088180 | 64.463 | 121 | 40 | 2 | 125 | 245 | 295 | 412 | 2.07e-40 | 147 |
| MS.gene00051.t1 | MTR_8g018410 | 33.446 | 296 | 154 | 7 | 1 | 282 | 1 | 267 | 7.33e-32 | 120 |
| MS.gene00051.t1 | MTR_2g099610 | 35.349 | 215 | 108 | 4 | 1 | 190 | 1 | 209 | 2.69e-28 | 111 |
| MS.gene00051.t1 | MTR_1g041765 | 67.123 | 73 | 23 | 1 | 1 | 73 | 1 | 72 | 1.37e-26 | 104 |
| MS.gene00051.t1 | MTR_2g031880 | 50.000 | 110 | 47 | 2 | 59 | 168 | 1 | 102 | 2.37e-23 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00051.t1 | AT1G49950 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 7.52e-87 | 263 |
| MS.gene00051.t1 | AT1G49950 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 7.52e-87 | 263 |
| MS.gene00051.t1 | AT1G49950 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 7.52e-87 | 263 |
| MS.gene00051.t1 | AT3G49850 | 42.735 | 234 | 128 | 3 | 1 | 232 | 1 | 230 | 1.06e-52 | 175 |
| MS.gene00051.t1 | AT3G49850 | 42.735 | 234 | 128 | 3 | 1 | 232 | 1 | 230 | 1.06e-52 | 175 |
| MS.gene00051.t1 | AT5G67580 | 43.210 | 243 | 131 | 5 | 1 | 239 | 1 | 240 | 4.42e-52 | 174 |
| MS.gene00051.t1 | AT5G67580 | 43.210 | 243 | 131 | 5 | 1 | 239 | 1 | 240 | 4.42e-52 | 174 |
| MS.gene00051.t1 | AT1G72740 | 30.796 | 289 | 173 | 3 | 1 | 289 | 1 | 262 | 2.31e-32 | 122 |
| MS.gene00051.t1 | AT1G72740 | 30.508 | 295 | 172 | 4 | 1 | 289 | 1 | 268 | 4.74e-30 | 115 |
| MS.gene00051.t1 | AT1G17520 | 38.342 | 193 | 112 | 2 | 1 | 187 | 1 | 192 | 3.34e-28 | 111 |
| MS.gene00051.t1 | AT1G17520 | 39.572 | 187 | 106 | 2 | 1 | 181 | 1 | 186 | 2.22e-27 | 108 |
| MS.gene00051.t1 | AT1G17520 | 38.144 | 194 | 112 | 3 | 1 | 187 | 1 | 193 | 1.06e-26 | 107 |
| MS.gene00051.t1 | AT1G17520 | 39.362 | 188 | 106 | 3 | 1 | 181 | 1 | 187 | 5.72e-26 | 105 |
| MS.gene00051.t1 | AT1G54260 | 45.205 | 73 | 40 | 0 | 120 | 192 | 2 | 74 | 3.83e-12 | 64.7 |
Find 86 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGATATGCCGCAAATTTC+TGG | 0.156146 | 2.1:-60138220 | MS.gene00051:CDS |
| TAGGCATCTTAGTGATTATT+TGG | 0.182663 | 2.1:-60134683 | MS.gene00051:intron |
| AAGCCAAGATTTACCGTCTT+TGG | 0.203558 | 2.1:+60134979 | None:intergenic |
| ACACCCATCAACATTATTAT+TGG | 0.217687 | 2.1:-60135267 | MS.gene00051:CDS |
| CGTTTCGGAAACATTCTATT+AGG | 0.265452 | 2.1:-60134702 | MS.gene00051:CDS |
| TAGATATAGCTTCCATTATA+AGG | 0.267054 | 2.1:+60137486 | None:intergenic |
| TCATCATCACTTAGAGAAAA+AGG | 0.267733 | 2.1:+60138274 | None:intergenic |
| GTATTCTGTAGGACCATTAC+TGG | 0.323222 | 2.1:-60136352 | MS.gene00051:intron |
| AATGAAAAGGGTGCATTATC+AGG | 0.328121 | 2.1:-60138332 | MS.gene00051:CDS |
| AGCCAAGATTTACCGTCTTT+GGG | 0.343837 | 2.1:+60134980 | None:intergenic |
| TCAAGCATGGGGTGGGTAAA+TGG | 0.345523 | 2.1:-60138594 | MS.gene00051:CDS |
| GGGTTGTTGGGTAGGATAAA+TGG | 0.355008 | 2.1:-60138411 | MS.gene00051:intron |
| CCTTCCAATAATAATGTTGA+TGG | 0.370851 | 2.1:+60135263 | None:intergenic |
| TATAAAACATGGTTAAATTC+AGG | 0.375074 | 2.1:+60138553 | None:intergenic |
| TTATTGGAAGGGAGGCAAAA+AGG | 0.396790 | 2.1:-60135251 | MS.gene00051:CDS |
| TCGGTCAAATGTTGATCTAA+AGG | 0.406182 | 2.1:-60138527 | MS.gene00051:intron |
| AATACACGAGGACAACTCTA+TGG | 0.413485 | 2.1:-60138305 | MS.gene00051:CDS |
| TTCAGGTGAAGCGCAGGTAT+AGG | 0.433823 | 2.1:-60135325 | MS.gene00051:intron |
| TGCGGAAGGATTTATCGTTT+CGG | 0.437464 | 2.1:-60134717 | MS.gene00051:CDS |
| TTCTAATTCTAAATCGATCT+CGG | 0.439248 | 2.1:+60135184 | None:intergenic |
| CTCTTCAGCCTCCGCCATGA+GGG | 0.446885 | 2.1:+60135094 | None:intergenic |
| TTCTAAATCGATCTCGGACT+TGG | 0.447008 | 2.1:+60135190 | None:intergenic |
| TTGTAGAAGCTGAAAGGAAA+AGG | 0.451081 | 2.1:-60135019 | MS.gene00051:CDS |
| CAGGTTGGATAACCTTATAA+TGG | 0.457504 | 2.1:-60137498 | MS.gene00051:CDS |
| GGAGGCAGAGGCTGCAGAAG+CGG | 0.467500 | 2.1:-60135063 | MS.gene00051:CDS |
| CTTCCTCTGTCTGAATATGC+TGG | 0.476422 | 2.1:+60135290 | None:intergenic |
| AGCCAAAGGGAGCAATGAAA+AGG | 0.479925 | 2.1:-60138345 | MS.gene00051:CDS |
| CCTCATGGCGGAGGCTGAAG+AGG | 0.487598 | 2.1:-60135093 | MS.gene00051:CDS |
| AACCATTGCTTCTTTCATTG+AGG | 0.488576 | 2.1:-60137432 | MS.gene00051:intron |
| TCTTCACACTTCAATCAAGC+AGG | 0.490877 | 2.1:+60134599 | None:intergenic |
| TGCTCGAGCAGTTGCTGAAG+CGG | 0.494217 | 2.1:-60135120 | MS.gene00051:CDS |
| GAGGAATCCGCACTTAAAGC+TGG | 0.499504 | 2.1:-60138622 | MS.gene00051:CDS |
| CTGAAGTATCTTACATCTCG+TGG | 0.499992 | 2.1:-60136293 | MS.gene00051:CDS |
| GGCAGAGGCTGCAGAAGCGG+AGG | 0.501552 | 2.1:-60135060 | MS.gene00051:CDS |
| AGCGGAAGCCCTCATGGCGG+AGG | 0.503203 | 2.1:-60135102 | MS.gene00051:CDS |
| CCTCTTCAGCCTCCGCCATG+AGG | 0.504586 | 2.1:+60135093 | None:intergenic |
| TGCTGAAGCGGAAGCCCTCA+TGG | 0.511274 | 2.1:-60135108 | MS.gene00051:CDS |
| AAATGTGATTTGTTTGCGGA+AGG | 0.516426 | 2.1:-60134731 | MS.gene00051:CDS |
| ATAGAGTTGTCCTCGTGTAT+TGG | 0.517777 | 2.1:+60138307 | None:intergenic |
| TTAGAAATGTGATTTGTTTG+CGG | 0.517996 | 2.1:-60134735 | MS.gene00051:intron |
| GGCTGCCTCTTGTGCAGACA+TGG | 0.522460 | 2.1:+60135151 | None:intergenic |
| ATATCTAGCTTGAATGAACT+TGG | 0.526305 | 2.1:-60137470 | MS.gene00051:CDS |
| ATCTCGTGGAAAACTGATCA+AGG | 0.527774 | 2.1:-60136279 | MS.gene00051:intron |
| AACTGCTCGAGCAGCACATG+CGG | 0.528875 | 2.1:+60135130 | None:intergenic |
| GGCAAGTGGATGGGCTTCGA+GGG | 0.532126 | 2.1:-60138371 | MS.gene00051:CDS |
| TATTCTGTAGGACCATTACT+GGG | 0.533689 | 2.1:-60136351 | MS.gene00051:intron |
| AAATCGATCTCGGACTTGGT+AGG | 0.533919 | 2.1:+60135194 | None:intergenic |
| TTATATTTCAGGTGAAGCGC+AGG | 0.535455 | 2.1:-60135331 | MS.gene00051:intron |
| AAGCTGGAGTTATCAAGCAT+GGG | 0.537538 | 2.1:-60138606 | MS.gene00051:CDS |
| CTGTCTGAATATGCTGGAGT+AGG | 0.541994 | 2.1:+60135296 | None:intergenic |
| AAAGCTGGAGTTATCAAGCA+TGG | 0.542386 | 2.1:-60138607 | MS.gene00051:CDS |
| TGGCAAGTGGATGGGCTTCG+AGG | 0.542668 | 2.1:-60138372 | MS.gene00051:CDS |
| CCATCAACATTATTATTGGA+AGG | 0.543532 | 2.1:-60135263 | MS.gene00051:CDS |
| AATCGATCTCGGACTTGGTA+GGG | 0.545887 | 2.1:+60135195 | None:intergenic |
| AGAGGCAACAAAGGAGGCAG+AGG | 0.547850 | 2.1:-60135075 | MS.gene00051:CDS |
| AGTCAGCAGGTGCCCAGTAA+TGG | 0.551122 | 2.1:+60136339 | None:intergenic |
| CAACATTATTATTGGAAGGG+AGG | 0.564310 | 2.1:-60135259 | MS.gene00051:CDS |
| CATCAACATTATTATTGGAA+GGG | 0.566044 | 2.1:-60135262 | MS.gene00051:CDS |
| AAGGTCCATGTCTGCACAAG+AGG | 0.566181 | 2.1:-60135156 | MS.gene00051:CDS |
| GCCAAAGGGAGCAATGAAAA+GGG | 0.571330 | 2.1:-60138344 | MS.gene00051:CDS |
| TACCTCAATGAAAGAAGCAA+TGG | 0.571520 | 2.1:+60137430 | None:intergenic |
| TCTAGCTTGAATGAACTTGG+TGG | 0.579223 | 2.1:-60137467 | MS.gene00051:CDS |
| TGAGCGTGATGGCAAGTGGA+TGG | 0.581001 | 2.1:-60138381 | MS.gene00051:CDS |
| GAGCGTGATGGCAAGTGGAT+GGG | 0.581966 | 2.1:-60138380 | MS.gene00051:CDS |
| GGAGTTATCAAGCATGGGGT+GGG | 0.587974 | 2.1:-60138601 | MS.gene00051:CDS |
| CTTCCAATAATAATGTTGAT+GGG | 0.591104 | 2.1:+60135264 | None:intergenic |
| TTAGATCAACATTTGACCGA+AGG | 0.594489 | 2.1:+60138530 | None:intergenic |
| GGAGGCTGAAGAGGCAACAA+AGG | 0.596715 | 2.1:-60135084 | MS.gene00051:CDS |
| TGGAGTTATCAAGCATGGGG+TGG | 0.597697 | 2.1:-60138602 | MS.gene00051:CDS |
| GGCTTCGAGGGAGAAGCCAA+AGG | 0.598632 | 2.1:-60138359 | MS.gene00051:CDS |
| GGCTGAAGAGGCAACAAAGG+AGG | 0.605389 | 2.1:-60135081 | MS.gene00051:CDS |
| ATGGCGAAATTTGAGCGTGA+TGG | 0.606348 | 2.1:-60138392 | MS.gene00051:CDS |
| AGAAGCGGAGGCAGATGCAA+TGG | 0.616552 | 2.1:-60135048 | MS.gene00051:CDS |
| CTTCACACTTCAATCAAGCA+GGG | 0.617336 | 2.1:+60134600 | None:intergenic |
| AGCTGAAAGGAAAAGGCTGA+AGG | 0.619969 | 2.1:-60135012 | MS.gene00051:CDS |
| GCTTCGAGGGAGAAGCCAAA+GGG | 0.621979 | 2.1:-60138358 | MS.gene00051:CDS |
| GGTTAAATTCAGGATCCTTG+AGG | 0.623114 | 2.1:+60138563 | None:intergenic |
| AATTTGAGCGTGATGGCAAG+TGG | 0.631289 | 2.1:-60138385 | MS.gene00051:CDS |
| ATATCTCTTGAAACTTGAAG+AGG | 0.637010 | 2.1:+60138235 | None:intergenic |
| TTGACCGAAGGTATAAAACA+TGG | 0.643379 | 2.1:+60138542 | None:intergenic |
| GATAACTCCAGCTTTAAGTG+CGG | 0.649462 | 2.1:+60138615 | None:intergenic |
| AGCTGGAGTTATCAAGCATG+GGG | 0.657193 | 2.1:-60138605 | MS.gene00051:CDS |
| ACTCCAGCATATTCAGACAG+AGG | 0.701760 | 2.1:-60135293 | MS.gene00051:CDS |
| TAAATGGCGTACGATCCTCA+AGG | 0.711423 | 2.1:-60138578 | MS.gene00051:CDS |
| TTATCAGGCACCAATACACG+AGG | 0.743899 | 2.1:-60138317 | MS.gene00051:CDS |
| TGAAGCGGAAGCCCTCATGG+CGG | 0.749745 | 2.1:-60135105 | MS.gene00051:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAATAAAATAATT+GGG | + | chr2.1:60135101-60135120 | None:intergenic | 0.0% |
| !! | AATATCTTAGAAAATTTATT+GGG | - | chr2.1:60136012-60136031 | MS.gene00051:intron | 10.0% |
| !!! | ATTTAGAATTAGAAAAAATA+AGG | - | chr2.1:60138093-60138112 | MS.gene00051:intron | 10.0% |
| !! | CTATAACTTAATACATTAAT+AGG | - | chr2.1:60138329-60138348 | MS.gene00051:CDS | 15.0% |
| !! | GAATATCTTAGAAAATTTAT+TGG | - | chr2.1:60136011-60136030 | MS.gene00051:intron | 15.0% |
| !! | GATTACATATGATATTATTT+GGG | - | chr2.1:60138372-60138391 | MS.gene00051:CDS | 15.0% |
| !! | GATTGTAATTTATTAATCTA+GGG | + | chr2.1:60136330-60136349 | None:intergenic | 15.0% |
| !! | TAAATAAATGATTCCTTTAT+AGG | + | chr2.1:60135733-60135752 | None:intergenic | 15.0% |
| !! | TGATTGTAATTTATTAATCT+AGG | + | chr2.1:60136331-60136350 | None:intergenic | 15.0% |
| !!! | AATTTGAGATTTTATTTCAT+GGG | - | chr2.1:60137907-60137926 | MS.gene00051:intron | 15.0% |
| !! | ATTAAGTTATAGTATGACAA+AGG | + | chr2.1:60138321-60138340 | None:intergenic | 20.0% |
| !! | GGATTACATATGATATTATT+TGG | - | chr2.1:60138371-60138390 | MS.gene00051:CDS | 20.0% |
| !! | GTAATGAATTGAATTAATGT+TGG | - | chr2.1:60134800-60134819 | MS.gene00051:intron | 20.0% |
| !! | TAAATGTATAAGACTAAATC+AGG | + | chr2.1:60137836-60137855 | None:intergenic | 20.0% |
| !! | TATAAAACATGGTTAAATTC+AGG | + | chr2.1:60134718-60134737 | None:intergenic | 20.0% |
| !! | TATTTATCTTGATCAACTAT+TGG | - | chr2.1:60135500-60135519 | MS.gene00051:intron | 20.0% |
| !! | TCTATGATTAGTACAAATAT+GGG | - | chr2.1:60136137-60136156 | MS.gene00051:intron | 20.0% |
| !! | TTCTATGATTAGTACAAATA+TGG | - | chr2.1:60136048-60136067 | MS.gene00051:intron | 20.0% |
| !! | TTTAAGTCTACATTAGAAAA+TGG | + | chr2.1:60137773-60137792 | None:intergenic | 20.0% |
| !! | TTTGTACTAATCATAGAATA+TGG | + | chr2.1:60136046-60136065 | None:intergenic | 20.0% |
| !!! | AAATAATTTTATAGTGCAGT+CGG | - | chr2.1:60135561-60135580 | MS.gene00051:intron | 20.0% |
| !!! | ATACACATCTATTTGAAATA+GGG | - | chr2.1:60137646-60137665 | MS.gene00051:intron | 20.0% |
| !!! | ATTTTCTTCTATACAATTCT+AGG | + | chr2.1:60136398-60136417 | None:intergenic | 20.0% |
| !!! | CAATTTGAGATTTTATTTCA+TGG | - | chr2.1:60137906-60137925 | MS.gene00051:intron | 20.0% |
| ! | AAAAAACTTAAGACTCACAT+TGG | - | chr2.1:60137331-60137350 | MS.gene00051:intron | 25.0% |
| ! | AATAAAATAATCTCAGGACA+AGG | - | chr2.1:60137504-60137523 | MS.gene00051:intron | 25.0% |
| ! | AATCCTATTCAATTCTTGAT+GGG | - | chr2.1:60135286-60135305 | MS.gene00051:CDS | 25.0% |
| ! | ATAAAATAATCTCAGGACAA+GGG | - | chr2.1:60137505-60137524 | MS.gene00051:intron | 25.0% |
| ! | ATCTTAGAAAATTTATTGGG+AGG | - | chr2.1:60136015-60136034 | MS.gene00051:intron | 25.0% |
| ! | ATTAAAATTCCACTATGCTA+TGG | + | chr2.1:60135181-60135200 | None:intergenic | 25.0% |
| ! | CAAAACAAGATAATGAAATC+AGG | + | chr2.1:60135668-60135687 | None:intergenic | 25.0% |
| ! | CATCAACATTATTATTGGAA+GGG | - | chr2.1:60138006-60138025 | MS.gene00051:intron | 25.0% |
| ! | CTTCCAATAATAATGTTGAT+GGG | + | chr2.1:60138007-60138026 | None:intergenic | 25.0% |
| ! | GATATTGTCTTGTAAATGAT+AGG | + | chr2.1:60136363-60136382 | None:intergenic | 25.0% |
| ! | TAGATATAGCTTCCATTATA+AGG | + | chr2.1:60135785-60135804 | None:intergenic | 25.0% |
| ! | TAGATTCTCTGATTGAAATA+CGG | - | chr2.1:60135260-60135279 | MS.gene00051:CDS | 25.0% |
| ! | TAGCTGAATAAAATAATCTC+AGG | - | chr2.1:60137498-60137517 | MS.gene00051:CDS | 25.0% |
| ! | TATACCAATTATATGACTGT+AGG | - | chr2.1:60137434-60137453 | MS.gene00051:CDS | 25.0% |
| ! | TATGGAAGAGCAAATAAAAT+TGG | + | chr2.1:60138402-60138421 | None:intergenic | 25.0% |
| ! | TATTGTAAGTTTGCATTAGA+TGG | + | chr2.1:60137050-60137069 | None:intergenic | 25.0% |
| ! | TGAATTGTTATATGGTCATA+TGG | - | chr2.1:60136213-60136232 | MS.gene00051:intron | 25.0% |
| ! | TTCTAATTCTAAATCGATCT+CGG | + | chr2.1:60138087-60138106 | None:intergenic | 25.0% |
| !! | CATACACATCTATTTGAAAT+AGG | - | chr2.1:60137645-60137664 | MS.gene00051:intron | 25.0% |
| !! | GCTTATTTATTCATTTGTTG+TGG | - | chr2.1:60134778-60134797 | MS.gene00051:intron | 25.0% |
| !! | TACACATCTATTTGAAATAG+GGG | - | chr2.1:60137647-60137666 | MS.gene00051:intron | 25.0% |
| !! | TTAACCATGTTTTATACCTT+CGG | - | chr2.1:60134722-60134741 | MS.gene00051:CDS | 25.0% |
| !! | TTCATCATTTTGTATTCTGT+AGG | - | chr2.1:60136905-60136924 | MS.gene00051:intron | 25.0% |
| !!! | TAATACCATCTAGTGTTTTT+TGG | + | chr2.1:60137228-60137247 | None:intergenic | 25.0% |
| !!! | TGGGTTGAATTTTATATTTC+AGG | - | chr2.1:60137926-60137945 | MS.gene00051:intron | 25.0% |
| !!! | TTAGAAATGTGATTTGTTTG+CGG | - | chr2.1:60138533-60138552 | MS.gene00051:CDS | 25.0% |
| AACTTGGTTCATGGAATATA+CGG | + | chr2.1:60137277-60137296 | None:intergenic | 30.0% | |
| AAGAAAATTACAACTCGACA+AGG | + | chr2.1:60137616-60137635 | None:intergenic | 30.0% | |
| AAGCAGAACAAATAAAAGTG+TGG | + | chr2.1:60135881-60135900 | None:intergenic | 30.0% | |
| AAGTGTTATAGCATTGCATT+TGG | - | chr2.1:60136820-60136839 | MS.gene00051:intron | 30.0% | |
| ACACCCATCAACATTATTAT+TGG | - | chr2.1:60138001-60138020 | MS.gene00051:intron | 30.0% | |
| ACATAAAACTTCTAATGTCG+CGG | - | chr2.1:60137369-60137388 | MS.gene00051:intron | 30.0% | |
| AGAATTTGTGTAATGTGTAG+GGG | + | chr2.1:60137412-60137431 | None:intergenic | 30.0% | |
| AGATTCTCTGATTGAAATAC+GGG | - | chr2.1:60135261-60135280 | MS.gene00051:CDS | 30.0% | |
| ATATCTCTTGAAACTTGAAG+AGG | + | chr2.1:60135036-60135055 | None:intergenic | 30.0% | |
| ATCTAAAGGTTTCGTTATGT+GGG | - | chr2.1:60134837-60134856 | MS.gene00051:intron | 30.0% | |
| ATTGTTATATGGTCATATGG+AGG | - | chr2.1:60136216-60136235 | MS.gene00051:intron | 30.0% | |
| CAGAATTTGTGTAATGTGTA+GGG | + | chr2.1:60137413-60137432 | None:intergenic | 30.0% | |
| CCATCAACATTATTATTGGA+AGG | - | chr2.1:60138005-60138024 | MS.gene00051:intron | 30.0% | |
| CCTTCCAATAATAATGTTGA+TGG | + | chr2.1:60138008-60138027 | None:intergenic | 30.0% | |
| CTACCTTGTGAATTGTTATA+TGG | - | chr2.1:60136205-60136224 | MS.gene00051:intron | 30.0% | |
| GAATCCTATTCAATTCTTGA+TGG | - | chr2.1:60135285-60135304 | MS.gene00051:CDS | 30.0% | |
| TAAAATAATCTCAGGACAAG+GGG | - | chr2.1:60137506-60137525 | MS.gene00051:intron | 30.0% | |
| TAACTGTGTTTACGTTATAC+AGG | - | chr2.1:60135751-60135770 | MS.gene00051:intron | 30.0% | |
| TAGGCATCTTAGTGATTATT+TGG | - | chr2.1:60138585-60138604 | MS.gene00051:CDS | 30.0% | |
| TCATCATCACTTAGAGAAAA+AGG | + | chr2.1:60134997-60135016 | None:intergenic | 30.0% | |
| TCTCACATTAGCTAGAAATA+AGG | - | chr2.1:60137135-60137154 | MS.gene00051:intron | 30.0% | |
| TGAAGCTAATTTGAGCTAAT+TGG | + | chr2.1:60136611-60136630 | None:intergenic | 30.0% | |
| TGACCATATAACAATTCACA+AGG | + | chr2.1:60136211-60136230 | None:intergenic | 30.0% | |
| TTGAAATAGCATCATAGATC+AGG | + | chr2.1:60136736-60136755 | None:intergenic | 30.0% | |
| ! | AAAAAGCTCTAGTATAAGGT+TGG | - | chr2.1:60135074-60135093 | MS.gene00051:CDS | 30.0% |
| ! | AAAAGCTCTAGTATAAGGTT+GGG | - | chr2.1:60135075-60135094 | MS.gene00051:CDS | 30.0% |
| ! | AACCTTATACTAGAGCTTTT+TGG | + | chr2.1:60135075-60135094 | None:intergenic | 30.0% |
| ! | AAGGCTCTATGAAATTTTAC+AGG | - | chr2.1:60138036-60138055 | MS.gene00051:intron | 30.0% |
| ! | ACCTTATACTAGAGCTTTTT+GGG | + | chr2.1:60135074-60135093 | None:intergenic | 30.0% |
| ! | ACCTTTAGATCCAGATTTTA+CGG | + | chr2.1:60134827-60134846 | None:intergenic | 30.0% |
| ! | AGGCTCTATGAAATTTTACA+GGG | - | chr2.1:60138037-60138056 | MS.gene00051:intron | 30.0% |
| ! | ATATCTAGCTTGAATGAACT+TGG | - | chr2.1:60135798-60135817 | MS.gene00051:intron | 30.0% |
| ! | CATGTTGTTATTCTAACTTC+AGG | - | chr2.1:60135917-60135936 | MS.gene00051:intron | 30.0% |
| ! | GTTTTGCGTGAATCATATAA+AGG | - | chr2.1:60135682-60135701 | MS.gene00051:intron | 30.0% |
| ! | TGAGATGCTATTCTCATTTT+TGG | - | chr2.1:60137859-60137878 | MS.gene00051:intron | 30.0% |
| ! | TTGATTTTGCTAGCTAAGTT+GGG | - | chr2.1:60136516-60136535 | MS.gene00051:intron | 30.0% |
| !! | AAGATGCTTGGATTAGTATT+AGG | - | chr2.1:60137101-60137120 | MS.gene00051:intron | 30.0% |
| !! | CAATTCTAGGACTATAAACA+AGG | + | chr2.1:60136385-60136404 | None:intergenic | 30.0% |
| !! | CGACATTAGAAGTTTTATGT+AGG | + | chr2.1:60137369-60137388 | None:intergenic | 30.0% |
| !! | TTTGATTTTGCTAGCTAAGT+TGG | - | chr2.1:60136515-60136534 | MS.gene00051:intron | 30.0% |
| !!! | AGTAGTGACTTTTTTCTTGA+AGG | - | chr2.1:60137577-60137596 | MS.gene00051:intron | 30.0% |
| AACCATTGCTTCTTTCATTG+AGG | - | chr2.1:60135836-60135855 | MS.gene00051:intron | 35.0% | |
| AATAGGTGAGATCATCTTAG+TGG | + | chr2.1:60136295-60136314 | None:intergenic | 35.0% | |
| ACACTAACAAACTTGGTTCA+TGG | + | chr2.1:60137286-60137305 | None:intergenic | 35.0% | |
| ACCGTAAAATCTGGATCTAA+AGG | - | chr2.1:60134823-60134842 | MS.gene00051:intron | 35.0% | |
| ACTAAGATGATCTCACCTAT+TGG | - | chr2.1:60136294-60136313 | MS.gene00051:CDS | 35.0% | |
| AGATGTTCGAACGTAATCAA+GGG | - | chr2.1:60135364-60135383 | MS.gene00051:intron | 35.0% | |
| AGTGTCTATCCAGACATTAT+TGG | - | chr2.1:60137247-60137266 | MS.gene00051:intron | 35.0% | |
| ATAGGTGAGATCATCTTAGT+GGG | + | chr2.1:60136294-60136313 | None:intergenic | 35.0% | |
| ATGAATGATCTTAACACGCT+TGG | + | chr2.1:60135621-60135640 | None:intergenic | 35.0% | |
| CAACATTATTATTGGAAGGG+AGG | - | chr2.1:60138009-60138028 | MS.gene00051:intron | 35.0% | |
| CAAGAATACAAGGAAAGCAA+TGG | + | chr2.1:60135645-60135664 | None:intergenic | 35.0% | |
| CAGACCTACAGTCATATAAT+TGG | + | chr2.1:60137441-60137460 | None:intergenic | 35.0% | |
| CCAGAATTTGTGTAATGTGT+AGG | + | chr2.1:60137414-60137433 | None:intergenic | 35.0% | |
| CCTACACATTACACAAATTC+TGG | - | chr2.1:60137411-60137430 | MS.gene00051:intron | 35.0% | |
| CGAAATTATCTTCCACTTGA+GGG | + | chr2.1:60135344-60135363 | None:intergenic | 35.0% | |
| CGTTTCGGAAACATTCTATT+AGG | - | chr2.1:60138566-60138585 | MS.gene00051:CDS | 35.0% | |
| CTAAGATGATCTCACCTATT+GGG | - | chr2.1:60136295-60136314 | MS.gene00051:CDS | 35.0% | |
| CTCACTTGTCTTCAACATAA+TGG | + | chr2.1:60136588-60136607 | None:intergenic | 35.0% | |
| GAAATTATCTTCCACTTGAG+GGG | + | chr2.1:60135343-60135362 | None:intergenic | 35.0% | |
| GAGAGATGGTGAAACAAATA+AGG | - | chr2.1:60137534-60137553 | MS.gene00051:intron | 35.0% | |
| GATCCCATCAAGAATTGAAT+AGG | + | chr2.1:60135292-60135311 | None:intergenic | 35.0% | |
| GATCTAAAGGTTTCGTTATG+TGG | - | chr2.1:60134836-60134855 | MS.gene00051:intron | 35.0% | |
| GTTATAGCATTGCATTTGGT+TGG | - | chr2.1:60136824-60136843 | MS.gene00051:intron | 35.0% | |
| TAATGTTGGACCGTAAAATC+TGG | - | chr2.1:60134814-60134833 | MS.gene00051:intron | 35.0% | |
| TACCTCAATGAAAGAAGCAA+TGG | + | chr2.1:60135841-60135860 | None:intergenic | 35.0% | |
| TATTCTGTAGGACCATTACT+GGG | - | chr2.1:60136917-60136936 | MS.gene00051:intron | 35.0% | |
| TCAATCAGAGAATCTAACTG+AGG | + | chr2.1:60135256-60135275 | None:intergenic | 35.0% | |
| TCGAAATTATCTTCCACTTG+AGG | + | chr2.1:60135345-60135364 | None:intergenic | 35.0% | |
| TCGGTCAAATGTTGATCTAA+AGG | - | chr2.1:60134741-60134760 | MS.gene00051:intron | 35.0% | |
| TGAAATCAGGCAAGAATACA+AGG | + | chr2.1:60135655-60135674 | None:intergenic | 35.0% | |
| TGTGTTTACGTTATACAGGT+TGG | - | chr2.1:60135755-60135774 | MS.gene00051:intron | 35.0% | |
| TGTTTCTTATATACAGCCGT+TGG | - | chr2.1:60137713-60137732 | MS.gene00051:intron | 35.0% | |
| TTAGATCAACATTTGACCGA+AGG | + | chr2.1:60134741-60134760 | None:intergenic | 35.0% | |
| TTGTAGAAGCTGAAAGGAAA+AGG | - | chr2.1:60138249-60138268 | MS.gene00051:CDS | 35.0% | |
| ! | AAGCTTTTGTAGAAGCTGAA+AGG | - | chr2.1:60138243-60138262 | MS.gene00051:CDS | 35.0% |
| ! | AATGAAAAGGGTGCATTATC+AGG | - | chr2.1:60134936-60134955 | MS.gene00051:intron | 35.0% |
| ! | CAGAGCTAGTTTGAAAAAGA+AGG | - | chr2.1:60136551-60136570 | MS.gene00051:intron | 35.0% |
| ! | CAGGTTGGATAACCTTATAA+TGG | - | chr2.1:60135770-60135789 | MS.gene00051:intron | 35.0% |
| ! | GGACATGTAGAAGATTCTTT+TGG | - | chr2.1:60138350-60138369 | MS.gene00051:CDS | 35.0% |
| ! | GTTTTGCTTGCATCCTATAA+AGG | - | chr2.1:60135717-60135736 | MS.gene00051:intron | 35.0% |
| ! | TGATTTTGCTAGCTAAGTTG+GGG | - | chr2.1:60136517-60136536 | MS.gene00051:intron | 35.0% |
| ! | TTAGCTCAAATTAGCTTCAG+TGG | - | chr2.1:60136612-60136631 | MS.gene00051:intron | 35.0% |
| ! | TTGACCGAAGGTATAAAACA+TGG | + | chr2.1:60134729-60134748 | None:intergenic | 35.0% |
| !! | AAATGTGATTTGTTTGCGGA+AGG | - | chr2.1:60138537-60138556 | MS.gene00051:CDS | 35.0% |
| !! | AACCAAGTTTGTTAGTGTTG+GGG | - | chr2.1:60137288-60137307 | MS.gene00051:intron | 35.0% |
| !! | GAACCAAGTTTGTTAGTGTT+GGG | - | chr2.1:60137287-60137306 | MS.gene00051:intron | 35.0% |
| !! | GTTGATCGGCTTTTTGAAAA+AGG | - | chr2.1:60135440-60135459 | MS.gene00051:intron | 35.0% |
| !! | TCTTCTGACCATTTTTGCTT+AGG | + | chr2.1:60134625-60134644 | None:intergenic | 35.0% |
| !! | TGAACCAAGTTTGTTAGTGT+TGG | - | chr2.1:60137286-60137305 | MS.gene00051:intron | 35.0% |
| !! | TTGCTTAACTCTAAGATGCT+TGG | - | chr2.1:60137089-60137108 | MS.gene00051:intron | 35.0% |
| AAAGCTGGAGTTATCAAGCA+TGG | - | chr2.1:60134661-60134680 | MS.gene00051:intron | 40.0% | |
| AAATAGCAGCCATAGCATAG+TGG | - | chr2.1:60135169-60135188 | MS.gene00051:CDS | 40.0% | |
| AAGCAGAGCTTATAAAGCCT+AGG | - | chr2.1:60137160-60137179 | MS.gene00051:intron | 40.0% | |
| AAGCCAAGATTTACCGTCTT+TGG | + | chr2.1:60138292-60138311 | None:intergenic | 40.0% | |
| AAGCTGGAGTTATCAAGCAT+GGG | - | chr2.1:60134662-60134681 | MS.gene00051:intron | 40.0% | |
| AATACACGAGGACAACTCTA+TGG | - | chr2.1:60134963-60134982 | MS.gene00051:intron | 40.0% | |
| AATACTCGCATCTATCACCT+AGG | - | chr2.1:60135524-60135543 | MS.gene00051:intron | 40.0% | |
| AGAGATATGCCGCAAATTTC+TGG | - | chr2.1:60135048-60135067 | MS.gene00051:CDS | 40.0% | |
| AGCCAAGATTTACCGTCTTT+GGG | + | chr2.1:60138291-60138310 | None:intergenic | 40.0% | |
| AGGAGAAAAACACCCAAAGA+CGG | - | chr2.1:60138276-60138295 | MS.gene00051:CDS | 40.0% | |
| ATACTCGCATCTATCACCTA+GGG | - | chr2.1:60135525-60135544 | MS.gene00051:intron | 40.0% | |
| ATAGAGTTGTCCTCGTGTAT+TGG | + | chr2.1:60134964-60134983 | None:intergenic | 40.0% | |
| ATATGGTCATATGGAGGTCA+TGG | - | chr2.1:60136222-60136241 | MS.gene00051:intron | 40.0% | |
| ATCTCGTGGAAAACTGATCA+AGG | - | chr2.1:60136989-60137008 | MS.gene00051:intron | 40.0% | |
| CGGCAGTTGTCTTTCAATTA+GGG | - | chr2.1:60135581-60135600 | MS.gene00051:intron | 40.0% | |
| CTCCAGCAAACCAATTTCTA+CGG | + | chr2.1:60137195-60137214 | None:intergenic | 40.0% | |
| GACACTTTACCACTGTTGAT+CGG | - | chr2.1:60135426-60135445 | MS.gene00051:intron | 40.0% | |
| GAGATGTTCGAACGTAATCA+AGG | - | chr2.1:60135363-60135382 | MS.gene00051:intron | 40.0% | |
| GCAAAAATGGTCAGAAGAAG+AGG | - | chr2.1:60134627-60134646 | MS.gene00051:intron | 40.0% | |
| GGTTAAATTCAGGATCCTTG+AGG | + | chr2.1:60134708-60134727 | None:intergenic | 40.0% | |
| GTATTCTGTAGGACCATTAC+TGG | - | chr2.1:60136916-60136935 | MS.gene00051:intron | 40.0% | |
| TAGGTGAGATCATCTTAGTG+GGG | + | chr2.1:60136293-60136312 | None:intergenic | 40.0% | |
| TATGGTCATATGGAGGTCAT+GGG | - | chr2.1:60136223-60136242 | MS.gene00051:intron | 40.0% | |
| TCAGGCCAAAAAACACTAGA+TGG | - | chr2.1:60137220-60137239 | MS.gene00051:intron | 40.0% | |
| TCGGCAGTTGTCTTTCAATT+AGG | - | chr2.1:60135580-60135599 | MS.gene00051:intron | 40.0% | |
| TGATGGGATCAGATCAGAAA+CGG | - | chr2.1:60135302-60135321 | MS.gene00051:CDS | 40.0% | |
| TGCGGAAGGATTTATCGTTT+CGG | - | chr2.1:60138551-60138570 | MS.gene00051:CDS | 40.0% | |
| TGGGTGTTCCTAAGCAAAAA+TGG | - | chr2.1:60134614-60134633 | MS.gene00051:intron | 40.0% | |
| TTATTGGAAGGGAGGCAAAA+AGG | - | chr2.1:60138017-60138036 | MS.gene00051:intron | 40.0% | |
| TTCAAAAAGCCGATCAACAG+TGG | + | chr2.1:60135438-60135457 | None:intergenic | 40.0% | |
| TTCTAAATCGATCTCGGACT+TGG | + | chr2.1:60138081-60138100 | None:intergenic | 40.0% | |
| TTGCAAATTATCCCCTCAAG+TGG | - | chr2.1:60135329-60135348 | MS.gene00051:intron | 40.0% | |
| TTGGTTCATGGAATATACGG+TGG | + | chr2.1:60137274-60137293 | None:intergenic | 40.0% | |
| TTGTGTAATGTGTAGGGGTT+GGG | + | chr2.1:60137407-60137426 | None:intergenic | 40.0% | |
| TTTGTGTAATGTGTAGGGGT+TGG | + | chr2.1:60137408-60137427 | None:intergenic | 40.0% | |
| TTTGTTCTATTCTGCACCCT+AGG | + | chr2.1:60135544-60135563 | None:intergenic | 40.0% | |
| ! | CTGAAGTATCTTACATCTCG+TGG | - | chr2.1:60136975-60136994 | MS.gene00051:intron | 40.0% |
| ! | GCCCAAAAAGCTCTAGTATA+AGG | - | chr2.1:60135070-60135089 | MS.gene00051:CDS | 40.0% |
| ! | GTTTCGTTATGTGGGTTGTT+GGG | - | chr2.1:60134845-60134864 | MS.gene00051:intron | 40.0% |
| ! | TAGGCTTTATAAGCTCTGCT+TGG | + | chr2.1:60137161-60137180 | None:intergenic | 40.0% |
| ! | TATATACAGCCGTTGGTTGT+GGG | - | chr2.1:60137720-60137739 | MS.gene00051:intron | 40.0% |
| ! | TCTAGCTTGAATGAACTTGG+TGG | - | chr2.1:60135801-60135820 | MS.gene00051:intron | 40.0% |
| ! | TTATATACAGCCGTTGGTTG+TGG | - | chr2.1:60137719-60137738 | MS.gene00051:intron | 40.0% |
| ! | TTATATTTCAGGTGAAGCGC+AGG | - | chr2.1:60137937-60137956 | MS.gene00051:intron | 40.0% |
| !! | AAACTAGCTCTGCTTCATGA+TGG | + | chr2.1:60136543-60136562 | None:intergenic | 40.0% |
| !! | ACCAAGTTTGTTAGTGTTGG+GGG | - | chr2.1:60137289-60137308 | MS.gene00051:intron | 40.0% |
| !! | AGTGGAAAATGGGCTAGATA+TGG | - | chr2.1:60137470-60137489 | MS.gene00051:CDS | 40.0% |
| !! | CGGCTTTTTGAAAAAGGATG+AGG | - | chr2.1:60135446-60135465 | MS.gene00051:intron | 40.0% |
| !! | CTTTTTGGGCCAGAAATTTG+CGG | + | chr2.1:60135060-60135079 | None:intergenic | 40.0% |
| !! | GATAACTCCAGCTTTAAGTG+CGG | + | chr2.1:60134656-60134675 | None:intergenic | 40.0% |
| !! | TATTTGAAATAGGGGTGCTG+TGG | - | chr2.1:60137655-60137674 | MS.gene00051:intron | 40.0% |
| AACCACAAGACACAGTAACC+AGG | + | chr2.1:60136689-60136708 | None:intergenic | 45.0% | |
| AACCTGGTTACTGTGTCTTG+TGG | - | chr2.1:60136684-60136703 | MS.gene00051:intron | 45.0% | |
| AATCTCAGGACAAGGGGATT+TGG | - | chr2.1:60137512-60137531 | MS.gene00051:intron | 45.0% | |
| AATTTGAGCGTGATGGCAAG+TGG | - | chr2.1:60134883-60134902 | MS.gene00051:intron | 45.0% | |
| ACCCCCAACACTAACAAACT+TGG | + | chr2.1:60137293-60137312 | None:intergenic | 45.0% | |
| ACTCACATTGGCGTGAGATA+AGG | - | chr2.1:60137343-60137362 | MS.gene00051:intron | 45.0% | |
| ACTCCAGCATATTCAGACAG+AGG | - | chr2.1:60137975-60137994 | MS.gene00051:intron | 45.0% | |
| AGATGATCTCACCTATTGGG+AGG | - | chr2.1:60136298-60136317 | MS.gene00051:CDS | 45.0% | |
| AGCCAAAGGGAGCAATGAAA+AGG | - | chr2.1:60134923-60134942 | MS.gene00051:intron | 45.0% | |
| AGCTGAAAGGAAAAGGCTGA+AGG | - | chr2.1:60138256-60138275 | MS.gene00051:CDS | 45.0% | |
| AGCTGGAGTTATCAAGCATG+GGG | - | chr2.1:60134663-60134682 | MS.gene00051:intron | 45.0% | |
| ATGGCGAAATTTGAGCGTGA+TGG | - | chr2.1:60134876-60134895 | MS.gene00051:intron | 45.0% | |
| CACAGTAACCAGGTTTCAGA+AGG | + | chr2.1:60136679-60136698 | None:intergenic | 45.0% | |
| CACCCAAAGACGGTAAATCT+TGG | - | chr2.1:60138286-60138305 | MS.gene00051:CDS | 45.0% | |
| CTAATGTCGCGGCAAATCTT+AGG | - | chr2.1:60137380-60137399 | MS.gene00051:intron | 45.0% | |
| CTGTCTGAATATGCTGGAGT+AGG | + | chr2.1:60137975-60137994 | None:intergenic | 45.0% | |
| CTTCCTCTGTCTGAATATGC+TGG | + | chr2.1:60137981-60138000 | None:intergenic | 45.0% | |
| GAGTTCGTGGAGTGGAAAAT+GGG | - | chr2.1:60137460-60137479 | MS.gene00051:CDS | 45.0% | |
| GCAAACCAATTTCTACGGTG+AGG | + | chr2.1:60137190-60137209 | None:intergenic | 45.0% | |
| GCAATCCTCACCGTAGAAAT+TGG | - | chr2.1:60137182-60137201 | MS.gene00051:intron | 45.0% | |
| GCCAAAGGGAGCAATGAAAA+GGG | - | chr2.1:60134924-60134943 | MS.gene00051:intron | 45.0% | |
| GGGTTGTTGGGTAGGATAAA+TGG | - | chr2.1:60134857-60134876 | MS.gene00051:intron | 45.0% | |
| TAAATGGCGTACGATCCTCA+AGG | - | chr2.1:60134690-60134709 | MS.gene00051:CDS | 45.0% | |
| TAACCAGGTTTCAGAAGGCA+TGG | + | chr2.1:60136674-60136693 | None:intergenic | 45.0% | |
| TACACCAGCAAGCATATCAG+AGG | + | chr2.1:60136253-60136272 | None:intergenic | 45.0% | |
| TACGGTGGTCCAATAATGTC+TGG | + | chr2.1:60137259-60137278 | None:intergenic | 45.0% | |
| TCCATAAAACCTGCTTGCGA+GGG | - | chr2.1:60138416-60138435 | MS.gene00051:intron | 45.0% | |
| TGAGTTCGTGGAGTGGAAAA+TGG | - | chr2.1:60137459-60137478 | MS.gene00051:CDS | 45.0% | |
| TGTGTAATGTGTAGGGGTTG+GGG | + | chr2.1:60137406-60137425 | None:intergenic | 45.0% | |
| TTATCAGGCACCAATACACG+AGG | - | chr2.1:60134951-60134970 | MS.gene00051:intron | 45.0% | |
| TTCCATAAAACCTGCTTGCG+AGG | - | chr2.1:60138415-60138434 | MS.gene00051:intron | 45.0% | |
| ! | AAATCGATCTCGGACTTGGT+AGG | + | chr2.1:60138077-60138096 | None:intergenic | 45.0% |
| ! | AATCGATCTCGGACTTGGTA+GGG | + | chr2.1:60138076-60138095 | None:intergenic | 45.0% |
| ! | ACCCTTTTCATTGCTCCCTT+TGG | + | chr2.1:60134928-60134947 | None:intergenic | 45.0% |
| ! | CTGATATGCTTGCTGGTGTA+AGG | - | chr2.1:60136253-60136272 | MS.gene00051:intron | 45.0% |
| ! | GGTTTCGTTATGTGGGTTGT+TGG | - | chr2.1:60134844-60134863 | MS.gene00051:intron | 45.0% |
| ! | GTCACTTTAGCAACCACACA+AGG | - | chr2.1:60135402-60135421 | MS.gene00051:intron | 45.0% |
| ! | TGGTAAAGTGTCACCTTGTG+TGG | + | chr2.1:60135418-60135437 | None:intergenic | 45.0% |
| !! | CACCGTAGAAATTGGTTTGC+TGG | - | chr2.1:60137190-60137209 | MS.gene00051:intron | 45.0% |
| !! | TGGTTTGCTGGAGTTGAATC+AGG | - | chr2.1:60137202-60137221 | MS.gene00051:intron | 45.0% |
| !!! | AGCAGCTTTTTGAAGTCAGC+AGG | + | chr2.1:60136945-60136964 | None:intergenic | 45.0% |
| !! | CAAAAATAAAATAAAATAAT+TGG | + | chr2.1:60135102-60135121 | None:intergenic | 5.0% |
| !!! | TTATTTTTGTTTTTTTAATA+TGG | - | chr2.1:60135113-60135132 | MS.gene00051:CDS | 5.0% |
| AAGGTCCATGTCTGCACAAG+AGG | - | chr2.1:60138112-60138131 | MS.gene00051:intron | 50.0% | |
| ACAGCCTCTGATATGCTTGC+TGG | - | chr2.1:60136246-60136265 | MS.gene00051:intron | 50.0% | |
| GACAAGGGGATTTGGAGAGA+TGG | - | chr2.1:60137520-60137539 | MS.gene00051:intron | 50.0% | |
| GAGGAATCCGCACTTAAAGC+TGG | - | chr2.1:60134646-60134665 | MS.gene00051:intron | 50.0% | |
| GGAGTTATCAAGCATGGGGT+GGG | - | chr2.1:60134667-60134686 | MS.gene00051:intron | 50.0% | |
| TCAAGCATGGGGTGGGTAAA+TGG | - | chr2.1:60134674-60134693 | MS.gene00051:intron | 50.0% | |
| TGAATCCTGACGCAAGAGTG+AGG | - | chr2.1:60136179-60136198 | MS.gene00051:intron | 50.0% | |
| TGACTGTAGGTCTGAGTTCG+TGG | - | chr2.1:60137447-60137466 | MS.gene00051:CDS | 50.0% | |
| TGGAGTTATCAAGCATGGGG+TGG | - | chr2.1:60134666-60134685 | MS.gene00051:intron | 50.0% | |
| TGTATTATGCCCTCGCAAGC+AGG | + | chr2.1:60138428-60138447 | None:intergenic | 50.0% | |
| TTCAGGTGAAGCGCAGGTAT+AGG | - | chr2.1:60137943-60137962 | MS.gene00051:intron | 50.0% | |
| TTCTACGGTGAGGATTGCCT+AGG | + | chr2.1:60137180-60137199 | None:intergenic | 50.0% | |
| ! | CGTTATGTGGGTTGTTGGGT+AGG | - | chr2.1:60134849-60134868 | MS.gene00051:intron | 50.0% |
| !! | ACTCCATGCCTTCTGAAACC+TGG | - | chr2.1:60136668-60136687 | MS.gene00051:intron | 50.0% |
| AACTGCTCGAGCAGCACATG+CGG | + | chr2.1:60138141-60138160 | None:intergenic | 55.0% | |
| AGAAGCGGAGGCAGATGCAA+TGG | - | chr2.1:60138220-60138239 | MS.gene00051:CDS | 55.0% | |
| AGAGGCAACAAAGGAGGCAG+AGG | - | chr2.1:60138193-60138212 | MS.gene00051:intron | 55.0% | |
| AGTCAGCAGGTGCCCAGTAA+TGG | + | chr2.1:60136932-60136951 | None:intergenic | 55.0% | |
| ATCCTGACGCAAGAGTGAGG+TGG | - | chr2.1:60136182-60136201 | MS.gene00051:intron | 55.0% | |
| CAGCCCAAACCCACAACCAA+CGG | + | chr2.1:60137732-60137751 | None:intergenic | 55.0% | |
| GAGCGTGATGGCAAGTGGAT+GGG | - | chr2.1:60134888-60134907 | MS.gene00051:intron | 55.0% | |
| GCTTCGAGGGAGAAGCCAAA+GGG | - | chr2.1:60134910-60134929 | MS.gene00051:intron | 55.0% | |
| GGAGGCTGAAGAGGCAACAA+AGG | - | chr2.1:60138184-60138203 | MS.gene00051:intron | 55.0% | |
| GGCTGAAGAGGCAACAAAGG+AGG | - | chr2.1:60138187-60138206 | MS.gene00051:intron | 55.0% | |
| GTAGGTCTGAGTTCGTGGAG+TGG | - | chr2.1:60137452-60137471 | MS.gene00051:CDS | 55.0% | |
| TAGGGCACAAGCCTCCCAAT+AGG | + | chr2.1:60136312-60136331 | None:intergenic | 55.0% | |
| TGAGCGTGATGGCAAGTGGA+TGG | - | chr2.1:60134887-60134906 | MS.gene00051:intron | 55.0% | |
| TGCAAGACACTCACACGCAC+AGG | + | chr2.1:60136645-60136664 | None:intergenic | 55.0% | |
| TGCTCGAGCAGTTGCTGAAG+CGG | - | chr2.1:60138148-60138167 | MS.gene00051:intron | 55.0% | |
| ! | ACAGCCGTTGGTTGTGGGTT+TGG | - | chr2.1:60137725-60137744 | MS.gene00051:intron | 55.0% |
| ! | CAGCCGTTGGTTGTGGGTTT+GGG | - | chr2.1:60137726-60137745 | MS.gene00051:intron | 55.0% |
| ! | GCCCTCGCAAGCAGGTTTTA+TGG | + | chr2.1:60138420-60138439 | None:intergenic | 55.0% |
| ! | TAGTGTTGGGGGTGATGAGC+AGG | - | chr2.1:60137300-60137319 | MS.gene00051:intron | 55.0% |
| AGCCACCTCACTCTTGCGTC+AGG | + | chr2.1:60136187-60136206 | None:intergenic | 60.0% | |
| CTCTTCAGCCTCCGCCATGA+GGG | + | chr2.1:60138177-60138196 | None:intergenic | 60.0% | |
| GGCTGCCTCTTGTGCAGACA+TGG | + | chr2.1:60138120-60138139 | None:intergenic | 60.0% | |
| GGCTTCGAGGGAGAAGCCAA+AGG | - | chr2.1:60134909-60134928 | MS.gene00051:intron | 60.0% | |
| TGAAGCGGAAGCCCTCATGG+CGG | - | chr2.1:60138163-60138182 | MS.gene00051:intron | 60.0% | |
| TGCTGAAGCGGAAGCCCTCA+TGG | - | chr2.1:60138160-60138179 | MS.gene00051:intron | 60.0% | |
| ! | GGCAAGTGGATGGGCTTCGA+GGG | - | chr2.1:60134897-60134916 | MS.gene00051:intron | 60.0% |
| ! | TGGCAAGTGGATGGGCTTCG+AGG | - | chr2.1:60134896-60134915 | MS.gene00051:intron | 60.0% |
| CCTCTTCAGCCTCCGCCATG+AGG | + | chr2.1:60138178-60138197 | None:intergenic | 65.0% | |
| GGAGGCAGAGGCTGCAGAAG+CGG | - | chr2.1:60138205-60138224 | MS.gene00051:CDS | 65.0% | |
| ! | CCTCATGGCGGAGGCTGAAG+AGG | - | chr2.1:60138175-60138194 | MS.gene00051:intron | 65.0% |
| AGCGGAAGCCCTCATGGCGG+AGG | - | chr2.1:60138166-60138185 | MS.gene00051:intron | 70.0% | |
| GGCAGAGGCTGCAGAAGCGG+AGG | - | chr2.1:60138208-60138227 | MS.gene00051:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 60134613 | 60138677 | 60134613 | ID=MS.gene00051 |
| chr2.1 | mRNA | 60134613 | 60138677 | 60134613 | ID=MS.gene00051.t1;Parent=MS.gene00051 |
| chr2.1 | exon | 60138528 | 60138677 | 60138528 | ID=MS.gene00051.t1.exon1;Parent=MS.gene00051.t1 |
| chr2.1 | CDS | 60138528 | 60138677 | 60138528 | ID=cds.MS.gene00051.t1;Parent=MS.gene00051.t1 |
| chr2.1 | exon | 60138199 | 60138419 | 60138199 | ID=MS.gene00051.t1.exon2;Parent=MS.gene00051.t1 |
| chr2.1 | CDS | 60138199 | 60138419 | 60138199 | ID=cds.MS.gene00051.t1;Parent=MS.gene00051.t1 |
| chr2.1 | exon | 60137433 | 60137517 | 60137433 | ID=MS.gene00051.t1.exon3;Parent=MS.gene00051.t1 |
| chr2.1 | CDS | 60137433 | 60137517 | 60137433 | ID=cds.MS.gene00051.t1;Parent=MS.gene00051.t1 |
| chr2.1 | exon | 60136280 | 60136363 | 60136280 | ID=MS.gene00051.t1.exon4;Parent=MS.gene00051.t1 |
| chr2.1 | CDS | 60136280 | 60136363 | 60136280 | ID=cds.MS.gene00051.t1;Parent=MS.gene00051.t1 |
| chr2.1 | exon | 60134993 | 60135342 | 60134993 | ID=MS.gene00051.t1.exon5;Parent=MS.gene00051.t1 |
| chr2.1 | CDS | 60134993 | 60135342 | 60134993 | ID=cds.MS.gene00051.t1;Parent=MS.gene00051.t1 |
| chr2.1 | exon | 60134684 | 60134753 | 60134684 | ID=MS.gene00051.t1.exon6;Parent=MS.gene00051.t1 |
| chr2.1 | CDS | 60134684 | 60134753 | 60134684 | ID=cds.MS.gene00051.t1;Parent=MS.gene00051.t1 |
| chr2.1 | exon | 60134613 | 60134627 | 60134613 | ID=MS.gene00051.t1.exon7;Parent=MS.gene00051.t1 |
| chr2.1 | CDS | 60134613 | 60134627 | 60134613 | ID=cds.MS.gene00051.t1;Parent=MS.gene00051.t1 |
| Gene Sequence |
| Protein sequence |
