AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000514

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000514.t1 MTR_8g100050 97.808 821 18 0 1 821 13 833 0.0 1672
MS.gene000514.t1 MTR_8g100050 97.582 703 17 0 1 703 13 715 0.0 1428
MS.gene000514.t1 MTR_2g005240 61.731 439 157 3 31 462 7 441 0.0 551
MS.gene000514.t1 MTR_2g005240 41.489 188 99 3 610 797 470 646 6.02e-35 142
MS.gene000514.t1 MTR_8g027440 64.167 360 123 5 30 388 13 367 2.12e-159 480
MS.gene000514.t1 MTR_8g027440 39.362 188 94 4 609 786 468 645 5.65e-27 117
MS.gene000514.t1 MTR_7g062540 61.436 376 135 7 41 411 8 378 5.31e-155 469
MS.gene000514.t1 MTR_7g062540 37.566 189 105 4 604 792 488 663 8.85e-31 129
MS.gene000514.t1 MTR_4g021580 62.895 380 121 7 47 418 19 386 7.48e-153 461
MS.gene000514.t1 MTR_4g021580 55.072 69 30 1 697 765 554 621 2.41e-17 87.0
MS.gene000514.t1 MTR_4g021580 62.895 380 121 7 47 418 19 386 9.45e-153 462
MS.gene000514.t1 MTR_4g021580 50.962 104 47 2 697 797 554 656 2.58e-26 115
MS.gene000514.t1 MTR_4g060460 38.925 614 327 10 45 622 52 653 6.15e-136 423
MS.gene000514.t1 MTR_4g060460 48.649 111 55 1 693 803 658 766 3.20e-29 125
MS.gene000514.t1 MTR_2g093740 48.821 424 201 5 45 457 54 472 3.79e-135 418
MS.gene000514.t1 MTR_4g060460 38.789 611 327 10 45 622 52 648 5.62e-135 420
MS.gene000514.t1 MTR_4g060460 48.649 111 55 1 693 803 653 761 3.42e-29 125
MS.gene000514.t1 MTR_2g093740 48.821 424 201 5 45 457 54 472 1.75e-134 418
MS.gene000514.t1 MTR_2g093740 51.351 74 36 0 693 766 677 750 1.81e-19 94.0
MS.gene000514.t1 MTR_2g093740 48.821 424 201 5 45 457 54 472 6.38e-134 418
MS.gene000514.t1 MTR_2g093740 50.000 104 52 0 693 796 677 780 5.33e-30 127
MS.gene000514.t1 MTR_2g093740 47.140 437 202 6 45 457 54 485 2.95e-131 408
MS.gene000514.t1 MTR_2g093740 47.368 437 201 6 45 457 54 485 2.12e-130 407
MS.gene000514.t1 MTR_2g093740 51.351 74 36 0 693 766 690 763 2.09e-19 94.0
MS.gene000514.t1 MTR_2g093740 47.368 437 201 6 45 457 54 485 5.41e-130 408
MS.gene000514.t1 MTR_2g093740 50.000 104 52 0 693 796 690 793 6.60e-30 127
MS.gene000514.t1 MTR_2g018690 53.825 366 165 4 43 405 19 383 1.05e-122 391
MS.gene000514.t1 MTR_2g018690 46.667 90 46 2 698 786 775 863 6.59e-17 86.3
MS.gene000514.t1 MTR_4g088210 46.905 420 183 5 40 438 31 431 2.32e-122 385
MS.gene000514.t1 MTR_4g088210 46.905 420 183 5 40 438 31 431 3.87e-122 384
MS.gene000514.t1 MTR_2g014770 47.666 407 193 3 41 438 47 442 6.75e-121 378
MS.gene000514.t1 MTR_2g014770 47.666 407 193 3 41 438 47 442 2.72e-120 379
MS.gene000514.t1 MTR_8g079492 52.055 365 172 3 43 405 19 382 2.63e-119 382
MS.gene000514.t1 MTR_8g079492 43.434 99 54 2 698 795 781 878 1.76e-16 84.7
MS.gene000514.t1 MTR_8g079492 52.055 365 172 3 43 405 19 382 2.77e-119 382
MS.gene000514.t1 MTR_8g079492 43.434 99 54 2 698 795 782 879 1.80e-16 84.7
MS.gene000514.t1 MTR_5g076270 51.467 375 175 4 31 398 6 380 3.13e-119 380
MS.gene000514.t1 MTR_5g076270 44.828 87 46 2 701 786 718 803 2.16e-15 81.3
MS.gene000514.t1 MTR_3g064050 52.186 366 164 5 41 398 20 382 1.65e-118 379
MS.gene000514.t1 MTR_3g064050 47.126 87 44 2 701 786 726 811 6.84e-16 82.8
MS.gene000514.t1 MTR_4g124900 52.011 373 177 2 27 398 3 374 1.12e-114 375
MS.gene000514.t1 MTR_4g124900 42.105 133 72 4 693 821 965 1096 1.73e-21 100
MS.gene000514.t1 MTR_4g124900 52.011 373 177 2 27 398 3 374 1.68e-114 375
MS.gene000514.t1 MTR_4g124900 42.105 133 72 4 693 821 988 1119 1.91e-21 100
MS.gene000514.t1 MTR_1g024025 53.736 348 140 5 43 379 39 376 5.18e-111 368
MS.gene000514.t1 MTR_1g024025 42.857 91 50 2 698 787 754 843 6.41e-15 79.7
MS.gene000514.t1 MTR_1g024025 46.914 81 41 1 240 320 862 940 4.81e-12 70.5
MS.gene000514.t1 MTR_2g043250 52.841 352 164 2 34 384 10 360 1.17e-110 364
MS.gene000514.t1 MTR_2g043250 37.313 134 78 4 693 821 981 1113 1.19e-17 88.6
MS.gene000514.t1 MTR_8g101360 51.289 349 160 4 41 383 25 369 1.50e-104 347
MS.gene000514.t1 MTR_8g101360 43.860 114 59 4 698 807 984 1096 2.84e-19 94.0
MS.gene000514.t1 MTR_2g093740 49.387 326 160 3 133 457 21 342 1.51e-100 325
MS.gene000514.t1 MTR_2g093740 51.351 74 36 0 693 766 547 620 1.43e-19 94.0
MS.gene000514.t1 MTR_2g093740 49.538 325 159 3 134 457 22 342 4.07e-100 325
MS.gene000514.t1 MTR_2g093740 50.000 104 52 0 693 796 547 650 3.34e-30 127
MS.gene000514.t1 MTR_2g093740 47.633 338 159 4 134 457 22 355 1.53e-96 315
MS.gene000514.t1 MTR_2g093740 51.351 74 36 0 693 766 560 633 1.81e-19 94.0
MS.gene000514.t1 MTR_2g093740 47.633 338 159 4 134 457 22 355 2.99e-96 315
MS.gene000514.t1 MTR_2g093740 50.000 104 52 0 693 796 560 663 3.94e-30 127
MS.gene000514.t1 MTR_8g079492 52.492 301 140 3 107 405 1 300 5.46e-94 313
MS.gene000514.t1 MTR_8g079492 43.434 99 54 2 698 795 699 796 1.68e-16 84.7
MS.gene000514.t1 MTR_8g446900 46.326 313 157 6 89 397 3 308 2.19e-85 277
MS.gene000514.t1 MTR_2g094570 39.604 404 184 8 40 396 4 394 1.14e-78 267
MS.gene000514.t1 MTR_2g094570 39.604 404 184 8 40 396 4 394 1.20e-78 268
MS.gene000514.t1 MTR_2g094570 39.604 404 184 8 40 396 60 450 4.53e-78 268
MS.gene000514.t1 MTR_1g094960 37.956 411 195 9 35 399 7 403 2.15e-74 254
MS.gene000514.t1 MTR_4g058930 39.000 400 184 9 47 397 12 400 3.18e-74 256
MS.gene000514.t1 MTR_4g058930 38.750 400 185 8 47 397 12 400 4.87e-74 256
MS.gene000514.t1 MTR_1g064430 35.252 417 220 6 26 397 6 417 3.13e-72 250
MS.gene000514.t1 MTR_1g064430 35.252 417 220 6 26 397 19 430 3.67e-72 251
MS.gene000514.t1 MTR_7g101280 36.070 402 198 10 47 396 31 425 2.30e-63 225
MS.gene000514.t1 MTR_0041s0110 36.070 402 198 10 47 396 31 425 2.30e-63 225
MS.gene000514.t1 MTR_3g073420 33.953 430 232 7 42 437 14 425 7.83e-62 219
MS.gene000514.t1 MTR_5g040880 32.374 417 241 9 46 447 10 400 1.61e-57 206
MS.gene000514.t1 MTR_5g061220 32.637 383 213 9 47 399 19 386 2.09e-55 200
MS.gene000514.t1 MTR_7g101275 38.585 311 172 8 56 358 1 300 2.51e-54 194
MS.gene000514.t1 MTR_1g058210 32.303 356 234 4 47 401 12 361 6.61e-53 191
MS.gene000514.t1 MTR_2g024430 35.000 360 209 10 47 400 20 360 1.11e-51 189
MS.gene000514.t1 MTR_5g082140 33.978 362 214 9 46 399 11 355 4.44e-50 183
MS.gene000514.t1 MTR_2g006270 34.454 357 217 7 47 400 13 355 1.45e-49 181
MS.gene000514.t1 MTR_0041s0120 34.483 319 186 8 56 358 1 312 7.64e-45 167
MS.gene000514.t1 MTR_5g040740 32.219 329 183 9 47 360 12 315 4.01e-44 165
MS.gene000514.t1 MTR_2g006380 30.579 363 216 11 47 400 20 355 3.65e-43 163
MS.gene000514.t1 MTR_5g062970 37.745 204 116 3 47 246 38 234 2.84e-38 143
MS.gene000514.t1 MTR_5g060780 29.942 344 210 10 47 379 12 335 4.59e-38 147
MS.gene000514.t1 MTR_5g460920 29.651 344 211 10 47 379 12 335 1.07e-36 143
MS.gene000514.t1 MTR_5g061890 29.155 343 214 8 47 379 12 335 4.73e-36 141
MS.gene000514.t1 MTR_5g060630 28.351 388 223 12 47 393 12 385 1.27e-34 139
MS.gene000514.t1 MTR_5g460740 28.351 388 223 12 47 393 12 385 1.27e-34 139
MS.gene000514.t1 MTR_3g064050 48.276 145 71 2 258 398 1 145 2.84e-33 136
MS.gene000514.t1 MTR_3g064050 47.126 87 44 2 701 786 489 574 4.80e-16 82.8
MS.gene000514.t1 MTR_5g074840 38.554 166 70 4 150 314 27 161 3.81e-23 97.4
MS.gene000514.t1 MTR_5g032260 33.533 167 100 4 258 423 37 193 3.26e-17 85.5
MS.gene000514.t1 MTR_2g100780 30.769 117 58 2 701 794 150 266 3.51e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000514.t1 AT5G62000 64.106 872 242 13 1 819 1 854 0.0 1081
MS.gene000514.t1 AT5G62000 64.106 872 242 13 1 819 1 854 0.0 1081
MS.gene000514.t1 AT5G62000 64.106 872 242 13 1 819 1 854 0.0 1081
MS.gene000514.t1 AT5G62000 64.106 872 242 13 1 819 1 854 0.0 1081
MS.gene000514.t1 AT5G62000 64.434 866 235 14 1 813 1 846 0.0 1076
MS.gene000514.t1 AT1G59750 66.929 381 123 2 27 405 2 381 5.17e-180 532
MS.gene000514.t1 AT1G59750 36.667 210 120 4 579 788 431 627 2.23e-32 134
MS.gene000514.t1 AT1G59750 66.929 381 123 2 27 405 2 381 5.76e-180 532
MS.gene000514.t1 AT1G59750 36.667 210 120 4 579 788 433 629 2.21e-32 134
MS.gene000514.t1 AT1G59750 66.929 381 123 2 27 405 2 381 8.50e-180 532
MS.gene000514.t1 AT1G59750 36.667 210 120 4 579 788 436 632 2.32e-32 134
MS.gene000514.t1 AT1G59750 66.929 381 123 2 27 405 2 381 8.50e-180 532
MS.gene000514.t1 AT1G59750 36.667 210 120 4 579 788 436 632 2.32e-32 134
MS.gene000514.t1 AT3G61830 62.467 381 134 6 25 403 6 379 4.33e-160 479
MS.gene000514.t1 AT3G61830 50.000 118 56 2 696 813 487 601 4.16e-29 124
MS.gene000514.t1 AT2G46530 65.043 349 116 5 44 391 18 361 2.09e-158 475
MS.gene000514.t1 AT2G46530 38.249 217 90 6 578 791 407 582 2.49e-29 124
MS.gene000514.t1 AT2G46530 65.043 349 116 5 44 391 39 382 3.58e-158 475
MS.gene000514.t1 AT2G46530 36.564 227 80 6 578 791 428 603 3.05e-29 124
MS.gene000514.t1 AT4G23980 59.948 382 149 3 44 424 9 387 2.95e-152 460
MS.gene000514.t1 AT4G23980 41.709 199 91 6 594 789 437 613 4.79e-32 133
MS.gene000514.t1 AT4G23980 60.686 379 138 4 44 414 9 384 4.79e-152 459
MS.gene000514.t1 AT4G23980 41.709 199 91 6 594 789 435 611 4.44e-32 133
MS.gene000514.t1 AT3G61830 62.349 332 119 5 74 403 1 328 4.21e-138 421
MS.gene000514.t1 AT3G61830 50.000 118 56 2 696 813 436 550 2.71e-29 124
MS.gene000514.t1 AT5G60450 49.510 408 191 4 42 439 36 438 4.55e-133 414
MS.gene000514.t1 AT5G60450 53.191 94 44 0 691 784 634 727 5.08e-28 121
MS.gene000514.t1 AT5G60450 49.754 406 189 4 44 439 62 462 1.51e-132 414
MS.gene000514.t1 AT5G60450 53.191 94 44 0 691 784 658 751 5.82e-28 121
MS.gene000514.t1 AT1G35540 52.023 346 147 4 40 379 20 352 1.38e-123 385
MS.gene000514.t1 AT1G35540 50.000 102 49 2 693 793 505 605 2.22e-25 112
MS.gene000514.t1 AT5G37020 52.116 378 171 4 37 408 12 385 1.65e-121 385
MS.gene000514.t1 AT5G37020 43.243 74 40 2 694 766 701 773 1.19e-11 68.9
MS.gene000514.t1 AT5G37020 52.116 378 171 4 37 408 12 385 5.43e-121 384
MS.gene000514.t1 AT5G37020 40.426 94 54 2 694 786 701 793 8.01e-15 79.3
MS.gene000514.t1 AT1G35240 50.716 349 163 4 40 388 20 359 5.61e-121 377
MS.gene000514.t1 AT1G35240 52.174 92 43 1 693 784 492 582 5.18e-25 111
MS.gene000514.t1 AT1G34310 50.986 355 153 5 40 388 20 359 6.10e-121 377
MS.gene000514.t1 AT1G34310 50.588 85 41 1 693 777 506 589 6.74e-22 101
MS.gene000514.t1 AT1G30330 53.825 366 165 4 43 405 21 385 1.19e-120 387
MS.gene000514.t1 AT1G30330 33.898 177 103 6 612 786 720 884 1.34e-16 85.1
MS.gene000514.t1 AT1G30330 53.825 366 165 4 43 405 21 385 1.19e-120 387
MS.gene000514.t1 AT1G30330 33.898 177 103 6 612 786 720 884 1.34e-16 85.1
MS.gene000514.t1 AT1G30330 53.825 366 165 4 43 405 19 383 1.23e-120 387
MS.gene000514.t1 AT1G30330 33.898 177 103 6 612 786 718 882 1.44e-16 85.1
MS.gene000514.t1 AT1G34410 47.194 392 186 6 40 429 20 392 2.06e-120 377
MS.gene000514.t1 AT1G34410 51.087 92 44 1 693 784 506 596 3.00e-24 108
MS.gene000514.t1 AT1G35520 50.423 355 155 5 40 388 20 359 3.42e-119 373
MS.gene000514.t1 AT1G35520 32.474 194 95 5 585 777 431 589 1.86e-22 103
MS.gene000514.t1 AT2G33860 46.814 408 197 4 40 438 47 443 1.48e-118 372
MS.gene000514.t1 AT1G34390 51.657 362 149 7 40 395 20 361 6.58e-117 367
MS.gene000514.t1 AT1G34390 47.727 88 45 1 693 780 504 590 4.38e-21 99.0
MS.gene000514.t1 AT1G34170 49.704 338 161 4 44 379 22 352 1.25e-115 360
MS.gene000514.t1 AT1G19850 53.936 343 140 4 47 379 54 388 1.93e-115 372
MS.gene000514.t1 AT1G19850 46.739 92 47 2 697 787 792 882 5.06e-18 89.7
MS.gene000514.t1 AT1G19850 53.936 343 140 4 47 379 43 377 2.95e-115 371
MS.gene000514.t1 AT1G19850 46.739 92 47 2 697 787 781 871 5.42e-18 89.7
MS.gene000514.t1 AT2G46530 65.748 254 83 3 138 391 25 274 2.37e-114 357
MS.gene000514.t1 AT2G46530 36.564 227 80 6 578 791 320 495 8.37e-30 125
MS.gene000514.t1 AT5G20730 52.893 363 166 3 47 408 24 382 1.67e-111 367
MS.gene000514.t1 AT5G20730 40.517 116 67 2 693 807 1032 1146 2.54e-19 94.0
MS.gene000514.t1 AT1G19220 52.342 363 168 3 47 408 23 381 4.46e-111 365
MS.gene000514.t1 AT1G19220 44.538 119 61 4 693 807 953 1070 7.80e-21 99.0
MS.gene000514.t1 AT5G20730 52.747 364 166 4 47 408 24 383 8.83e-110 363
MS.gene000514.t1 AT5G20730 40.517 116 67 2 693 807 1033 1147 2.52e-19 94.4
MS.gene000514.t1 AT5G20730 52.747 364 166 4 47 408 24 383 1.09e-109 362
MS.gene000514.t1 AT5G20730 44.792 96 51 2 693 787 1033 1127 5.14e-19 93.2
MS.gene000514.t1 AT1G34170 47.041 338 144 4 44 379 22 326 9.25e-101 321
MS.gene000514.t1 AT1G34170 47.041 338 144 4 44 379 22 326 1.48e-99 320
MS.gene000514.t1 AT1G34170 42.623 122 66 2 668 786 400 520 1.73e-22 102
MS.gene000514.t1 AT2G33860 49.827 289 141 1 150 438 2 286 7.61e-89 288
MS.gene000514.t1 AT5G37020 56.154 260 113 1 150 408 31 290 4.76e-87 291
MS.gene000514.t1 AT5G37020 40.426 94 54 2 694 786 606 698 7.23e-15 79.3
MS.gene000514.t1 AT2G28350 38.861 404 195 7 39 396 2 399 1.02e-78 268
MS.gene000514.t1 AT2G28350 38.861 404 195 7 39 396 2 399 1.17e-78 268
MS.gene000514.t1 AT4G30080 37.709 419 197 12 41 412 13 414 4.34e-75 258
MS.gene000514.t1 AT1G43950 51.429 210 95 3 40 249 20 222 8.74e-65 216
MS.gene000514.t1 AT1G77850 32.821 390 207 6 48 397 20 394 3.00e-53 195
MS.gene000514.t1 AT1G77850 33.163 392 203 7 48 397 20 394 4.11e-53 195
MS.gene000514.t1 AT5G25890 31.818 88 59 1 701 788 83 169 5.39e-12 65.5
MS.gene000514.t1 AT3G16500 30.709 127 67 3 674 783 131 253 3.59e-11 65.1
MS.gene000514.t1 AT3G16500 30.709 127 67 3 674 783 131 253 3.94e-11 65.1
MS.gene000514.t1 AT1G04550 28.462 130 79 3 684 800 109 237 6.64e-11 63.9

Find 194 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGATCAGCTATTTGAATT+TGG 0.210673 4.3:-7074979 MS.gene000514:CDS
ATCGACCTTGAGAGGAAATT+TGG 0.250119 4.3:-7075922 MS.gene000514:CDS
TTTAGATGTTGGCCATCTTT+TGG 0.254225 4.3:+7076299 None:intergenic
GGGATGCATTTATATTTCTA+AGG 0.282680 4.3:-7076975 MS.gene000514:intron
TTCCAATGCCCAGGCCTAAA+AGG 0.287769 4.3:-7076167 MS.gene000514:CDS
AAAGATGGCCAACATCTAAA+TGG 0.327483 4.3:-7076296 MS.gene000514:CDS
GACAGACCAGGTGGCATTAC+AGG 0.333510 4.3:+7075693 None:intergenic
AGTTCTAAGAGGCTGGTTGC+TGG 0.335910 4.3:-7076997 MS.gene000514:CDS
GGAGATGTCTCAAGGTTAGA+TGG 0.351091 4.3:-7076275 MS.gene000514:CDS
GGTGATTACTCAGTGCTTCA+TGG 0.355709 4.3:-7075576 MS.gene000514:CDS
TGATGAATTAACCGCTGAAT+TGG 0.360324 4.3:-7074998 MS.gene000514:CDS
AGCTTACAGTCACTGTCTTT+CGG 0.367081 4.3:+7075426 None:intergenic
TCGGACCTTCTGTCGGGATT+TGG 0.372145 4.3:-7075756 MS.gene000514:CDS
CGGGTAAGAACAGAAGAATC+TGG 0.384100 4.3:+7076117 None:intergenic
CTCATTCCCGTGCAGATCCT+TGG 0.394358 4.3:+7077200 None:intergenic
GAAGGTATGGTTCAGAGAAC+TGG 0.394883 4.3:-7075809 MS.gene000514:CDS
GCATGTTATGTTTGCCTTCA+CGG 0.404339 4.3:+7075727 None:intergenic
GCAAACACCTCATCAGTATC+TGG 0.405128 4.3:+7077651 None:intergenic
ATTGAAGGGTCCGGCATAGT+TGG 0.409564 4.3:+7075378 None:intergenic
CTTCTAGCAGAACCACTTTG+AGG 0.409668 4.3:+7075165 None:intergenic
CTGTGACGATTCTGTAGAAT+GGG 0.411759 4.3:+7075485 None:intergenic
CTTAGGACGGAGATCGTAAA+CGG 0.416054 4.3:+7077870 None:intergenic
TGATGAATGCCTTCCTCCAC+TGG 0.419523 4.3:-7077351 MS.gene000514:intron
AATATGAGATACAGTGCATT+TGG 0.421814 4.3:-7075597 MS.gene000514:CDS
CATGTTATGTTTGCCTTCAC+GGG 0.422513 4.3:+7075728 None:intergenic
GTTCTAAGAGGCTGGTTGCT+GGG 0.423320 4.3:-7076996 MS.gene000514:CDS
CTTGACCTTGCAAGACCCTC+TGG 0.423502 4.3:+7075949 None:intergenic
ACAACCACCTACACAGGAAT+TGG 0.425208 4.3:-7077226 MS.gene000514:CDS
CTTTGAGATATTGAAGGGTC+CGG 0.427004 4.3:+7075369 None:intergenic
AACACAAGTTCTCCTTCTCT+TGG 0.429337 4.3:+7078197 None:intergenic
GACAGTGACTGTAAGCTATT+CGG 0.430523 4.3:-7075420 MS.gene000514:CDS
ATGACCCGACAAAGGATCTT+AGG 0.431740 4.3:+7077853 None:intergenic
CTGCACTTTACAGAGAACTA+TGG 0.437647 4.3:-7078250 MS.gene000514:CDS
AAGGCTGGAACCAACGTATT+CGG 0.439474 4.3:-7075775 MS.gene000514:CDS
TTATTTAAGGTTCACAAGAA+AGG 0.439534 4.3:-7075066 MS.gene000514:intron
GGTTCTTCATCGTCATCAAC+AGG 0.445507 4.3:-7078383 MS.gene000514:CDS
TGAAATCGTGGCGGAGGAGC+AGG 0.449885 4.3:+7077452 None:intergenic
ACGTATTCGGACCTTCTGTC+GGG 0.452204 4.3:-7075762 MS.gene000514:CDS
TCGGTGTTCTTGCGACTGCT+TGG 0.455889 4.3:-7076774 MS.gene000514:CDS
TATTTAAGGTTCACAAGAAA+GGG 0.456345 4.3:-7075065 MS.gene000514:intron
TGCAACTGATGAAGAAAAGA+TGG 0.457264 4.3:-7075850 MS.gene000514:CDS
GCAGGGTAATGTTCCATCTT+CGG 0.458519 4.3:-7076821 MS.gene000514:CDS
TTGAAGGGTCCGGCATAGTT+GGG 0.459238 4.3:+7075379 None:intergenic
GGAAATTCTGTCAACGGAAA+AGG 0.460893 4.3:-7078443 MS.gene000514:CDS
TCCACAAGGACATATTGAAC+AGG 0.462225 4.3:-7078168 MS.gene000514:intron
GATCATTCATACCTTTGCTC+AGG 0.462655 4.3:+7076474 None:intergenic
TCCGTCCTAAGATCCTTTGT+CGG 0.466899 4.3:-7077858 MS.gene000514:CDS
GTTTCTACTTCAAGAAGGTA+TGG 0.468821 4.3:-7075822 MS.gene000514:CDS
CGGTTCAAAATGAGGTTTGA+GGG 0.469390 4.3:-7076507 MS.gene000514:CDS
GGGAGCTTCGAGTTGGTGTC+AGG 0.469625 4.3:-7076858 MS.gene000514:CDS
TTCCAAGGGGAAACTCTCTC+AGG 0.476366 4.3:+7076228 None:intergenic
TTCAGCCAAATTTCCTCTCA+AGG 0.477911 4.3:+7075917 None:intergenic
TTCTAAGAGGCTGGTTGCTG+GGG 0.482649 4.3:-7076995 MS.gene000514:CDS
GCATGCGTGTGCTGGTCCTT+TGG 0.485332 4.3:-7078228 MS.gene000514:CDS
TTAGGCCTGGGCATTGGAAG+AGG 0.486254 4.3:+7076171 None:intergenic
CACAAGAAAGGGATTGCGCT+TGG 0.489727 4.3:-7075054 MS.gene000514:CDS
ATCTCATATTACCTTGAGCT+TGG 0.492191 4.3:+7075610 None:intergenic
AGACATCTCCATTTAGATGT+TGG 0.493538 4.3:+7076288 None:intergenic
TCTGTGACGATTCTGTAGAA+TGG 0.496331 4.3:+7075484 None:intergenic
CGTGGTCTTCACTGATAATG+AGG 0.499290 4.3:-7074923 MS.gene000514:CDS
TGAACTAATATCTCCACAAA+AGG 0.500571 4.3:-7074953 MS.gene000514:CDS
AACGTATTCGGACCTTCTGT+CGG 0.500644 4.3:-7075763 MS.gene000514:CDS
TAATATCTCCACAAAAGGAT+TGG 0.501274 4.3:-7074948 MS.gene000514:CDS
CTCAGGACGAGGTATGTTAG+AGG 0.501630 4.3:+7076245 None:intergenic
AGGTTTACAGGTACCATTGT+TGG 0.502878 4.3:-7076339 MS.gene000514:CDS
GACATTTGCTGCAGAGTGGT+TGG 0.502895 4.3:-7077032 MS.gene000514:CDS
TTCTTGCACTCTAATATGAA+AGG 0.507078 4.3:-7075663 MS.gene000514:CDS
GATCAGCTATTTGAATTTGG+AGG 0.508832 4.3:-7074976 MS.gene000514:CDS
ATCATCAGAAGTATCTATGA+AGG 0.509774 4.3:-7078465 MS.gene000514:CDS
ACATTTCTTTGAGATATTGA+AGG 0.513230 4.3:+7075363 None:intergenic
AACATAACATGCTTACTCAA+TGG 0.515530 4.3:-7075716 MS.gene000514:CDS
TAGGCATGCGGTTCAAAATG+AGG 0.515608 4.3:-7076515 MS.gene000514:CDS
GGAAACCACTAGTGGGCAAA+GGG 0.516386 4.3:+7075970 None:intergenic
TCGTATTGAGTTGGTGGTGG+TGG 0.520513 4.3:+7075513 None:intergenic
GCTGTTGGAGATGCTCAAAA+TGG 0.520529 4.3:-7078404 MS.gene000514:CDS
CTGGATGTCAATGTCAAGGC+TGG 0.520967 4.3:-7075790 MS.gene000514:CDS
CCGTCCTAAGATCCTTTGTC+GGG 0.521751 4.3:-7077857 MS.gene000514:CDS
TTCTTGTGCATCTCCGCCAT+CGG 0.523242 4.3:+7074654 None:intergenic
CAGGCGTGCAATGAGACAGC+AGG 0.524850 4.3:-7076839 MS.gene000514:CDS
GGGTAAGAACAGAAGAATCT+GGG 0.526805 4.3:+7076118 None:intergenic
GAGGGTGACATGATGCTTGT+TGG 0.529132 4.3:-7074904 MS.gene000514:CDS
GACTCCATGTATTGATCATA+CGG 0.529240 4.3:+7076558 None:intergenic
CTCTGGTACCAAAGTCACTT+GGG 0.530252 4.3:+7077629 None:intergenic
TGCTTGTTGGCGACGATCCA+TGG 0.532108 4.3:-7074891 MS.gene000514:CDS
CTCTCGTATTGAGTTGGTGG+TGG 0.533181 4.3:+7075510 None:intergenic
GGACTCTCGTATTGAGTTGG+TGG 0.533575 4.3:+7075507 None:intergenic
TCTCAGTAGCCCAACTATGC+CGG 0.534348 4.3:-7075388 MS.gene000514:CDS
GAACTATGGCATGCGTGTGC+TGG 0.534486 4.3:-7078236 MS.gene000514:CDS
ACTATGACTAGTTTATCTGC+TGG 0.535958 4.3:+7075249 None:intergenic
GTCCTGAGAGAGTTTCCCCT+TGG 0.537173 4.3:-7076230 MS.gene000514:CDS
TATTGAGTTGGTGGTGGTGG+TGG 0.537370 4.3:+7075516 None:intergenic
CTCTTACACTGCAGAGAAGT+CGG 0.538791 4.3:-7075886 MS.gene000514:CDS
TAAATCCTCTTCCAATGCCC+AGG 0.538984 4.3:-7076176 MS.gene000514:CDS
TTGGCCACCAATTCCTGTGT+AGG 0.539634 4.3:+7077219 None:intergenic
GCCCACTAGTGGTTTCCAGA+GGG 0.539744 4.3:-7075964 MS.gene000514:CDS
TTGGTAACGGTTCCAAGAGA+AGG 0.539960 4.3:-7078209 MS.gene000514:CDS
CATTTCTTTGAGATATTGAA+GGG 0.541566 4.3:+7075364 None:intergenic
AGGGATTGCGCTTGGTAGGT+CGG 0.543005 4.3:-7075046 MS.gene000514:CDS
GGTGTTTGCCCAAGTGACTT+TGG 0.543173 4.3:-7077637 MS.gene000514:CDS
TCATCGTCATCAACAGGAAG+AGG 0.543621 4.3:-7078377 MS.gene000514:intron
GGTCATCAACGTTATGCTAA+AGG 0.544071 4.3:-7077836 MS.gene000514:intron
ATGGACCCTTTGCCCACTAG+TGG 0.547335 4.3:-7075975 MS.gene000514:CDS
AGAAAGGGATTGCGCTTGGT+AGG 0.549488 4.3:-7075050 MS.gene000514:CDS
GCTCTGGTACCAAAGTCACT+TGG 0.550915 4.3:+7077628 None:intergenic
TGGCTAGAGATAACCGAAGA+TGG 0.550920 4.3:+7076808 None:intergenic
ACCACCTACACAGGAATTGG+TGG 0.550997 4.3:-7077223 MS.gene000514:CDS
TACGGAACAATAAACTCCGC+TGG 0.551013 4.3:+7076576 None:intergenic
TTAGGACGGAGATCGTAAAC+GGG 0.552349 4.3:+7077871 None:intergenic
GCATCTGATACTAGTACTCA+TGG 0.552448 4.3:-7077401 MS.gene000514:CDS
AATGGTGATACTTACTGCCA+TGG 0.558365 4.3:+7074874 None:intergenic
AGAGCTGGAGGAGCAAGAGC+AGG 0.558684 4.3:+7076198 None:intergenic
TGCCCACTAGTGGTTTCCAG+AGG 0.560131 4.3:-7075965 MS.gene000514:CDS
AAGACTCTGACTCCAAAAGA+TGG 0.560145 4.3:-7076311 MS.gene000514:CDS
CAAGAATCATCGACCTTGAG+AGG 0.560987 4.3:-7075930 MS.gene000514:CDS
TGAACATGAAATCGTGGCGG+AGG 0.564882 4.3:+7077446 None:intergenic
GAGATGTCTCAAGGTTAGAT+GGG 0.565236 4.3:-7076274 MS.gene000514:CDS
GCCACCAATTCCTGTGTAGG+TGG 0.565859 4.3:+7077222 None:intergenic
ATGCTGTTTCTACTTCAAGA+AGG 0.568887 4.3:-7075827 MS.gene000514:CDS
TACACAGGAATTGGTGGCCA+AGG 0.568988 4.3:-7077217 MS.gene000514:CDS
GCGGTTCAAAATGAGGTTTG+AGG 0.569508 4.3:-7076508 MS.gene000514:CDS
CAATGGCCTGTAATGCCACC+TGG 0.569696 4.3:-7075699 MS.gene000514:CDS
TGGAAACCACTAGTGGGCAA+AGG 0.571230 4.3:+7075969 None:intergenic
AGCATCGTCAAAAGTATGCA+TGG 0.573669 4.3:-7075994 MS.gene000514:CDS
ATGAAGGGAAATTCTGTCAA+CGG 0.574818 4.3:-7078449 MS.gene000514:CDS
AATCGTGGCGGAGGAGCAGG+TGG 0.576113 4.3:+7077455 None:intergenic
AAGTTCTCATGATACCTTCG+CGG 0.576633 4.3:+7076097 None:intergenic
AGGATCTGCACGGGAATGAG+TGG 0.579697 4.3:-7077197 MS.gene000514:CDS
GTGTGCTGGTCCTTTGGTAA+CGG 0.580243 4.3:-7078222 MS.gene000514:CDS
AATGAGGTTTGAGGGTGAAG+AGG 0.581018 4.3:-7076499 MS.gene000514:CDS
GAGAACAAACCAGTGGAGGA+AGG 0.582901 4.3:+7077342 None:intergenic
AGCAGAGAACAAACCAGTGG+AGG 0.583434 4.3:+7077338 None:intergenic
GAACACCGAGATGCATGCTA+TGG 0.587167 4.3:+7076788 None:intergenic
TGGGGACTCTCGTATTGAGT+TGG 0.588356 4.3:+7075504 None:intergenic
TGTTCCGTATGATCAATACA+TGG 0.589206 4.3:-7076562 MS.gene000514:CDS
GTCAAAACAACCACCTACAC+AGG 0.589887 4.3:-7077232 MS.gene000514:CDS
GGAAGAGGATTTAGAGCTGG+AGG 0.589947 4.3:+7076186 None:intergenic
GAAAGCAACGTTGATGCTGT+TGG 0.591943 4.3:-7078419 MS.gene000514:CDS
ATTGGAAGAGGATTTAGAGC+TGG 0.592035 4.3:+7076183 None:intergenic
ATCTAAATGGAGATGTCTCA+AGG 0.592490 4.3:-7076283 MS.gene000514:CDS
GACCCTCTGGAAACCACTAG+TGG 0.593537 4.3:+7075962 None:intergenic
TGGTGGCCAAGGATCTGCAC+GGG 0.594504 4.3:-7077206 MS.gene000514:CDS
CTGCAGAGAAGTCGGTTGCG+TGG 0.594573 4.3:-7075878 MS.gene000514:CDS
AAGAAATTTAGCGACAGACC+AGG 0.596232 4.3:+7075681 None:intergenic
ACAGAAGAATCTGGGGAGGA+CGG 0.596550 4.3:+7076126 None:intergenic
AGTTGAACATCTTTAACATG+AGG 0.596830 4.3:+7075192 None:intergenic
AGCTTCGACAAATCAAGCAT+CGG 0.597524 4.3:-7077905 MS.gene000514:CDS
ATGTTGTGATGAAATTTGCA+TGG 0.600259 4.3:+7075320 None:intergenic
TCACTGTTTATTACAAACCC+CGG 0.603096 4.3:-7076726 MS.gene000514:intron
AATGCAACTTACCAAGCTCA+AGG 0.604596 4.3:-7075621 MS.gene000514:CDS
CACTACCAAATCCCGACAGA+AGG 0.606193 4.3:+7075751 None:intergenic
AGTTCTCATGATACCTTCGC+GGG 0.608316 4.3:+7076098 None:intergenic
AATATGAAAGGTTCTGCACA+AGG 0.609450 4.3:-7075651 MS.gene000514:CDS
TCTAGCCATAGCATGCATCT+CGG 0.612124 4.3:-7076793 MS.gene000514:CDS
GTGAAGAGGCTCCTGAGCAA+AGG 0.613106 4.3:-7076485 MS.gene000514:intron
GAGATTCAGAAAATGAGCCC+AGG 0.615563 4.3:-7074715 MS.gene000514:CDS
GAGAATGGGGAGCTTCGAGT+TGG 0.619668 4.3:-7076865 MS.gene000514:CDS
TCTTCTGTTCTTACCCGCGA+AGG 0.623215 4.3:-7076111 MS.gene000514:intron
TCTCTTGGAACCGTTACCAA+AGG 0.623814 4.3:+7078212 None:intergenic
AGAACTGGATGTCAATGTCA+AGG 0.624645 4.3:-7075794 MS.gene000514:CDS
GGTTTCCAGAGGGTCTTGCA+AGG 0.624805 4.3:-7075954 MS.gene000514:CDS
TCATCAGAAGTATCTATGAA+GGG 0.626313 4.3:-7078464 MS.gene000514:CDS
GTTCAACTCAAACCTCAAAG+TGG 0.626662 4.3:-7075177 MS.gene000514:CDS
TAAAAGGCCTCGAGCTAACG+TGG 0.628300 4.3:-7076151 MS.gene000514:CDS
GGGGAAACTCTCTCAGGACG+AGG 0.628573 4.3:+7076234 None:intergenic
AACGAATGAACATGAAATCG+TGG 0.628973 4.3:+7077440 None:intergenic
ACCTGTTCAATATGTCCTTG+TGG 0.632841 4.3:+7078167 None:intergenic
CTTCTGCAGGACAAGTCCAG+CGG 0.639810 4.3:-7076592 MS.gene000514:intron
GGATTTGGTAGTGCCCGTGA+AGG 0.642628 4.3:-7075741 MS.gene000514:CDS
CGTAGACATTTGCTGCAGAG+TGG 0.643093 4.3:-7077036 MS.gene000514:CDS
CCCGACAAAGGATCTTAGGA+CGG 0.643609 4.3:+7077857 None:intergenic
TGTTGTGATGAAATTTGCAT+GGG 0.646081 4.3:+7075321 None:intergenic
TTTGTAATAAACAGTGAACA+TGG 0.646135 4.3:+7076732 None:intergenic
GACGGCACCACGTTAGCTCG+AGG 0.646861 4.3:+7076144 None:intergenic
ACCCTCTGGAAACCACTAGT+GGG 0.647981 4.3:+7075963 None:intergenic
AATCATTCAGCTACCGATGG+CGG 0.649175 4.3:-7074667 MS.gene000514:CDS
TCCACAAAAGGATTGGCTCG+TGG 0.649190 4.3:-7074941 MS.gene000514:CDS
GAGAATCATTCAGCTACCGA+TGG 0.649809 4.3:-7074670 MS.gene000514:CDS
AGAGTCTTCAATGCCAACAA+TGG 0.650034 4.3:+7076326 None:intergenic
GTGGTCTTCACTGATAATGA+GGG 0.652302 4.3:-7074922 MS.gene000514:CDS
CTCTGCAGCAAATGTCTACG+TGG 0.656550 4.3:+7077039 None:intergenic
AGGCGTGCAATGAGACAGCA+GGG 0.658437 4.3:-7076838 MS.gene000514:CDS
TAACGTTGATGACCCGACAA+AGG 0.669433 4.3:+7077845 None:intergenic
CATAAAGTTGAAAATCCACA+CGG 0.673033 4.3:-7075552 MS.gene000514:CDS
TGTGACGATTCTGTAGAATG+GGG 0.680247 4.3:+7075486 None:intergenic
TTGGTGGCCAAGGATCTGCA+CGG 0.683444 4.3:-7077207 MS.gene000514:CDS
AAATAGCTGATCCAATTCAG+CGG 0.687488 4.3:+7074987 None:intergenic
GGCGGAGCCAGATACTGATG+AGG 0.688401 4.3:-7077658 MS.gene000514:CDS
ATAATTATACAATAGGCATG+CGG 0.696338 4.3:-7076527 MS.gene000514:CDS
GGTAAGAACAGAAGAATCTG+GGG 0.702517 4.3:+7076119 None:intergenic
AAGAACAGAAGAATCTGGGG+AGG 0.702793 4.3:+7076122 None:intergenic
AAATTTAGCGACAGACCAGG+TGG 0.706484 4.3:+7075684 None:intergenic
GACAGAAGGTCCGAATACGT+TGG 0.706729 4.3:+7075765 None:intergenic
GAATGAACATGAAATCGTGG+CGG 0.744883 4.3:+7077443 None:intergenic
TCTGATACTAGTACTCATGG+TGG 0.760741 4.3:-7077398 MS.gene000514:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAAAAAATAATTATACAAT+AGG - chr4.3:7076551-7076570 MS.gene000514:CDS 10.0%
!! GAAAAAAAATCAATTAAAAA+GGG + chr4.3:7078253-7078272 None:intergenic 10.0%
!! ACACAAAAATAATACAAATA+AGG + chr4.3:7078292-7078311 None:intergenic 15.0%
!! CTATTAGATAAAGAATAAAA+AGG + chr4.3:7076698-7076717 None:intergenic 15.0%
!! GGAAAAAAAATCAATTAAAA+AGG + chr4.3:7078254-7078273 None:intergenic 15.0%
!!! TAATTTTCTTTTAGTTTCTT+TGG - chr4.3:7075499-7075518 MS.gene000514:CDS 15.0%
!!! TTTTATATTTTTTTTGTAGG+CGG - chr4.3:7075409-7075428 MS.gene000514:CDS 15.0%
!! AAAAACAATTAAACAACACA+AGG + chr4.3:7075786-7075805 None:intergenic 20.0%
!! TGAATACAAAATAAATCAAG+TGG + chr4.3:7075965-7075984 None:intergenic 20.0%
!! TTAACATAATTCAATGCATT+AGG - chr4.3:7075153-7075172 MS.gene000514:intron 20.0%
!! TTATTCAAAAAAAGGAAAAG+AGG + chr4.3:7075283-7075302 None:intergenic 20.0%
!!! AACGAAATGATTCTTATTTA+AGG - chr4.3:7078006-7078025 MS.gene000514:intron 20.0%
!!! ATGGTTTTCTTTGTAATTAA+AGG - chr4.3:7074751-7074770 MS.gene000514:CDS 20.0%
!!! GGTTTCTTTTAACAAATTTA+TGG - chr4.3:7074772-7074791 MS.gene000514:intron 20.0%
!!! TCTAATAGTTTATTTTGATC+TGG - chr4.3:7076710-7076729 MS.gene000514:intron 20.0%
!!! TTAGTGTTTTTTGTTATTGT+TGG - chr4.3:7076164-7076183 MS.gene000514:CDS 20.0%
!!! TTATTTGTTGTTTTTGATTG+TGG - chr4.3:7075559-7075578 MS.gene000514:CDS 20.0%
!!! TTTTAGAACAATTTTCATAC+CGG + chr4.3:7076381-7076400 None:intergenic 20.0%
! AAACCATGAAAGAAAATTGT+CGG + chr4.3:7074966-7074985 None:intergenic 25.0%
! AAAGAAAATTGTCGGAAAAT+AGG + chr4.3:7074958-7074977 None:intergenic 25.0%
! AATAAGGTTATTCTTGAGAA+AGG + chr4.3:7078276-7078295 None:intergenic 25.0%
! ATAAGGTTATTCTTGAGAAA+GGG + chr4.3:7078275-7078294 None:intergenic 25.0%
! ATAATTATACAATAGGCATG+CGG - chr4.3:7076558-7076577 MS.gene000514:CDS 25.0%
! TGTTACTGTTAGAAAAAGAA+AGG + chr4.3:7075317-7075336 None:intergenic 25.0%
! TTGATCAACAAAAACAAATC+AGG + chr4.3:7077066-7077085 None:intergenic 25.0%
! TTTGTAATAAACAGTGAACA+TGG + chr4.3:7076356-7076375 None:intergenic 25.0%
!! ATTTTCTGAATCTCTTCTTT+GGG + chr4.3:7078364-7078383 None:intergenic 25.0%
!! ATTTTTGTGTACTCAAAATC+AGG - chr4.3:7078302-7078321 MS.gene000514:intron 25.0%
!! CTAATTTAGAAATTTTCCAG+AGG - chr4.3:7076196-7076215 MS.gene000514:CDS 25.0%
!! TATTTAAGGTTCACAAGAAA+GGG - chr4.3:7078020-7078039 MS.gene000514:intron 25.0%
!! TCTCTAGTTTATTGTCAAAA+AGG + chr4.3:7077981-7078000 None:intergenic 25.0%
!! TTATTTAAGGTTCACAAGAA+AGG - chr4.3:7078019-7078038 MS.gene000514:intron 25.0%
!! TTTTGTATTTGTAGGTTTAC+AGG - chr4.3:7076734-7076753 MS.gene000514:CDS 25.0%
!! TTTTTGTGTACTCAAAATCA+GGG - chr4.3:7078303-7078322 MS.gene000514:intron 25.0%
!!! ACATTTCTTTGAGATATTGA+AGG + chr4.3:7077725-7077744 None:intergenic 25.0%
!!! CATTTCTTTGAGATATTGAA+GGG + chr4.3:7077724-7077743 None:intergenic 25.0%
!!! TTCTTTTAGTTTCTTTGGTT+TGG - chr4.3:7075504-7075523 MS.gene000514:CDS 25.0%
!!! TTTAGAACAATTTTCATACC+GGG + chr4.3:7076380-7076399 None:intergenic 25.0%
AACAACTTACAACGTTAACA+TGG - chr4.3:7074732-7074751 MS.gene000514:CDS 30.0%
AACAATTAAACAACACAAGG+AGG + chr4.3:7075783-7075802 None:intergenic 30.0%
AACATAACATGCTTACTCAA+TGG - chr4.3:7077369-7077388 MS.gene000514:CDS 30.0%
AATATGAGATACAGTGCATT+TGG - chr4.3:7077488-7077507 MS.gene000514:CDS 30.0%
ACATAATTCAATGCATTAGG+TGG - chr4.3:7075156-7075175 MS.gene000514:CDS 30.0%
AGAAGAAATATGAGCAAGAA+CGG + chr4.3:7076478-7076497 None:intergenic 30.0%
AGTTGAACATCTTTAACATG+AGG + chr4.3:7077896-7077915 None:intergenic 30.0%
ATGTTGTGATGAAATTTGCA+TGG + chr4.3:7077768-7077787 None:intergenic 30.0%
CATAAAGTTGAAAATCCACA+CGG - chr4.3:7077533-7077552 MS.gene000514:intron 30.0%
GGTAATCAGAGAACTATAAA+TGG + chr4.3:7078232-7078251 None:intergenic 30.0%
TAATATCTCCACAAAAGGAT+TGG - chr4.3:7078137-7078156 MS.gene000514:intron 30.0%
TGAACTAATATCTCCACAAA+AGG - chr4.3:7078132-7078151 MS.gene000514:intron 30.0%
TGTTGTGATGAAATTTGCAT+GGG + chr4.3:7077767-7077786 None:intergenic 30.0%
TTCTTGCACTCTAATATGAA+AGG - chr4.3:7077422-7077441 MS.gene000514:CDS 30.0%
TTGGATCAGCTATTTGAATT+TGG - chr4.3:7078106-7078125 MS.gene000514:intron 30.0%
! CATTTTCTGAATCTCTTCTT+TGG + chr4.3:7078365-7078384 None:intergenic 30.0%
! GACAATTTTCTTTCATGGTT+TGG - chr4.3:7074965-7074984 MS.gene000514:CDS 30.0%
! GGGATGCATTTATATTTCTA+AGG - chr4.3:7076110-7076129 MS.gene000514:intron 30.0%
! TTAGAACAATTTTCATACCG+GGG + chr4.3:7076379-7076398 None:intergenic 30.0%
! TTTCCGACAATTTTCTTTCA+TGG - chr4.3:7074960-7074979 MS.gene000514:CDS 30.0%
! TTTTCTGAATCTCTTCTTTG+GGG + chr4.3:7078363-7078382 None:intergenic 30.0%
!! ATCATCAGAAGTATCTATGA+AGG - chr4.3:7074620-7074639 MS.gene000514:CDS 30.0%
!! TCATCAGAAGTATCTATGAA+GGG - chr4.3:7074621-7074640 MS.gene000514:CDS 30.0%
!! TTTTGTTGTGTTTGATGTGT+GGG - chr4.3:7076003-7076022 MS.gene000514:intron 30.0%
!! TTTTTGTTGTGTTTGATGTG+TGG - chr4.3:7076002-7076021 MS.gene000514:intron 30.0%
!!! GATCTGGTTTTTGTATTTGT+AGG - chr4.3:7076726-7076745 MS.gene000514:intron 30.0%
AAACCACACATGATATGCAA+AGG + chr4.3:7077033-7077052 None:intergenic 35.0%
AAAGATGGCCAACATCTAAA+TGG - chr4.3:7076789-7076808 MS.gene000514:CDS 35.0%
AAATAGCTGATCCAATTCAG+CGG + chr4.3:7078101-7078120 None:intergenic 35.0%
AACGAATGAACATGAAATCG+TGG + chr4.3:7075648-7075667 None:intergenic 35.0%
AATATGAAAGGTTCTGCACA+AGG - chr4.3:7077434-7077453 MS.gene000514:CDS 35.0%
AATGTCTTCAAAAACAAGCG+AGG - chr4.3:7077628-7077647 MS.gene000514:CDS 35.0%
ACAAACACCATCAATTTCAG+CGG + chr4.3:7075815-7075834 None:intergenic 35.0%
AGACATCTCCATTTAGATGT+TGG + chr4.3:7076800-7076819 None:intergenic 35.0%
ATCTAAATGGAGATGTCTCA+AGG - chr4.3:7076802-7076821 MS.gene000514:CDS 35.0%
ATCTCATATTACCTTGAGCT+TGG + chr4.3:7077478-7077497 None:intergenic 35.0%
ATGAAGGGAAATTCTGTCAA+CGG - chr4.3:7074636-7074655 MS.gene000514:CDS 35.0%
ATTAGCCGAAAAACTCACAT+TGG + chr4.3:7075483-7075502 None:intergenic 35.0%
GATCAGCTATTTGAATTTGG+AGG - chr4.3:7078109-7078128 MS.gene000514:intron 35.0%
GTTTCTACTTCAAGAAGGTA+TGG - chr4.3:7077263-7077282 MS.gene000514:intron 35.0%
TAAACCGGTAACATGAGTAA+CGG + chr4.3:7075013-7075032 None:intergenic 35.0%
TCACTGTTTATTACAAACCC+CGG - chr4.3:7076359-7076378 MS.gene000514:intron 35.0%
TGATGAATTAACCGCTGAAT+TGG - chr4.3:7078087-7078106 MS.gene000514:intron 35.0%
TGCAACTGATGAAGAAAAGA+TGG - chr4.3:7077235-7077254 MS.gene000514:CDS 35.0%
TGTTCCGTATGATCAATACA+TGG - chr4.3:7076523-7076542 MS.gene000514:CDS 35.0%
TTAGCCGAAAAACTCACATT+GGG + chr4.3:7075482-7075501 None:intergenic 35.0%
! AAATTTTCCAGAGGTGAGAA+TGG - chr4.3:7076205-7076224 MS.gene000514:CDS 35.0%
! AATTTTCCAGAGGTGAGAAT+GGG - chr4.3:7076206-7076225 MS.gene000514:CDS 35.0%
! ATCTTTTCTTCATCAGTTGC+AGG + chr4.3:7077236-7077255 None:intergenic 35.0%
! CTTGTGTTCTATTTTCCACA+AGG - chr4.3:7074903-7074922 MS.gene000514:CDS 35.0%
! GACTCCATGTATTGATCATA+CGG + chr4.3:7076530-7076549 None:intergenic 35.0%
! TATCATGTGTGGTTTTTGTG+TGG - chr4.3:7077038-7077057 MS.gene000514:CDS 35.0%
! TCTTTCTGATTGATTTCGCT+CGG - chr4.3:7076439-7076458 MS.gene000514:intron 35.0%
! TTCCTAATTTTGCAGCATCT+GGG - chr4.3:7075077-7075096 MS.gene000514:intron 35.0%
! TTGTCACACTTAACTCGTTT+TGG - chr4.3:7075054-7075073 MS.gene000514:CDS 35.0%
! TTTAGATGTTGGCCATCTTT+TGG + chr4.3:7076789-7076808 None:intergenic 35.0%
! TTTGTTGTGTTTGATGTGTG+GGG - chr4.3:7076004-7076023 MS.gene000514:intron 35.0%
!! ACTATGACTAGTTTATCTGC+TGG + chr4.3:7077839-7077858 None:intergenic 35.0%
!! ATGCTGTTTCTACTTCAAGA+AGG - chr4.3:7077258-7077277 MS.gene000514:intron 35.0%
!! CGTTTTAGGCATATTTTTCG+CGG - chr4.3:7075911-7075930 MS.gene000514:CDS 35.0%
!!! AATCAGGGAGTTTTGTTCAA+TGG - chr4.3:7078318-7078337 MS.gene000514:intron 35.0%
!!! GTGTTTTTGTCAGTTCTAAG+AGG - chr4.3:7076077-7076096 MS.gene000514:intron 35.0%
!!! GTTGTTTTTGATTGTGGATC+TGG - chr4.3:7075565-7075584 MS.gene000514:CDS 35.0%
AACACAAGTTCTCCTTCTCT+TGG + chr4.3:7074891-7074910 None:intergenic 40.0%
AACCCAGATGCTGCAAAATT+AGG + chr4.3:7075082-7075101 None:intergenic 40.0%
AAGAAATTTAGCGACAGACC+AGG + chr4.3:7077407-7077426 None:intergenic 40.0%
AAGACTCTGACTCCAAAAGA+TGG - chr4.3:7076774-7076793 MS.gene000514:CDS 40.0%
AAGTCCGTTACTCATGTTAC+CGG - chr4.3:7075006-7075025 MS.gene000514:CDS 40.0%
AAGTTCTCATGATACCTTCG+CGG + chr4.3:7076991-7077010 None:intergenic 40.0%
AATGCAACTTACCAAGCTCA+AGG - chr4.3:7077464-7077483 MS.gene000514:CDS 40.0%
AATGGTGATACTTACTGCCA+TGG + chr4.3:7078214-7078233 None:intergenic 40.0%
ACCTGTTCAATATGTCCTTG+TGG + chr4.3:7074921-7074940 None:intergenic 40.0%
AGAACTGGATGTCAATGTCA+AGG - chr4.3:7077291-7077310 MS.gene000514:intron 40.0%
AGAGTCTTCAATGCCAACAA+TGG + chr4.3:7076762-7076781 None:intergenic 40.0%
AGCTTACAGTCACTGTCTTT+CGG + chr4.3:7077662-7077681 None:intergenic 40.0%
AGCTTCGACAAATCAAGCAT+CGG - chr4.3:7075180-7075199 MS.gene000514:CDS 40.0%
AGGTTTACAGGTACCATTGT+TGG - chr4.3:7076746-7076765 MS.gene000514:CDS 40.0%
ATCGACCTTGAGAGGAAATT+TGG - chr4.3:7077163-7077182 MS.gene000514:intron 40.0%
CATGTTATGTTTGCCTTCAC+GGG + chr4.3:7077360-7077379 None:intergenic 40.0%
CGGTTCAAAATGAGGTTTGA+GGG - chr4.3:7076578-7076597 MS.gene000514:CDS 40.0%
CTGCACTTTACAGAGAACTA+TGG - chr4.3:7074835-7074854 MS.gene000514:intron 40.0%
CTGTGACGATTCTGTAGAAT+GGG + chr4.3:7077603-7077622 None:intergenic 40.0%
CTTGCTCATATTTCTTCTGC+AGG - chr4.3:7076480-7076499 MS.gene000514:intron 40.0%
GAATGAACATGAAATCGTGG+CGG + chr4.3:7075645-7075664 None:intergenic 40.0%
GACAGTGACTGTAAGCTATT+CGG - chr4.3:7077665-7077684 MS.gene000514:intron 40.0%
GAGATGTCTCAAGGTTAGAT+GGG - chr4.3:7076811-7076830 MS.gene000514:CDS 40.0%
GATCATTCATACCTTTGCTC+AGG + chr4.3:7076614-7076633 None:intergenic 40.0%
GCATCTGATACTAGTACTCA+TGG - chr4.3:7075684-7075703 MS.gene000514:CDS 40.0%
GCATGTTATGTTTGCCTTCA+CGG + chr4.3:7077361-7077380 None:intergenic 40.0%
GGAAATTCTGTCAACGGAAA+AGG - chr4.3:7074642-7074661 MS.gene000514:CDS 40.0%
GGGTAAGAACAGAAGAATCT+GGG + chr4.3:7076970-7076989 None:intergenic 40.0%
GGTAAGAACAGAAGAATCTG+GGG + chr4.3:7076969-7076988 None:intergenic 40.0%
GGTCATCAACGTTATGCTAA+AGG - chr4.3:7075249-7075268 MS.gene000514:CDS 40.0%
GTTCAACTCAAACCTCAAAG+TGG - chr4.3:7077908-7077927 MS.gene000514:CDS 40.0%
GTTGAGACACAGAGATAAAC+CGG + chr4.3:7075028-7075047 None:intergenic 40.0%
TAGTTTGAACAGAGCAGACA+TGG + chr4.3:7076404-7076423 None:intergenic 40.0%
TCCACAAGGACATATTGAAC+AGG - chr4.3:7074917-7074936 MS.gene000514:CDS 40.0%
TCTGATACTAGTACTCATGG+TGG - chr4.3:7075687-7075706 MS.gene000514:CDS 40.0%
TCTGTGACGATTCTGTAGAA+TGG + chr4.3:7077604-7077623 None:intergenic 40.0%
TGTGACGATTCTGTAGAATG+GGG + chr4.3:7077602-7077621 None:intergenic 40.0%
TTCAGCCAAATTTCCTCTCA+AGG + chr4.3:7077171-7077190 None:intergenic 40.0%
TTCCTTACCGCTGAAATTGA+TGG - chr4.3:7075805-7075824 MS.gene000514:CDS 40.0%
! AGAGCCCAATGTGAGTTTTT+CGG - chr4.3:7075475-7075494 MS.gene000514:CDS 40.0%
! AGCATCGTCAAAAGTATGCA+TGG - chr4.3:7077091-7077110 MS.gene000514:intron 40.0%
! ATTGGAAGAGGATTTAGAGC+TGG + chr4.3:7076905-7076924 None:intergenic 40.0%
! ATTTTCCAGAGGTGAGAATG+GGG - chr4.3:7076207-7076226 MS.gene000514:CDS 40.0%
! GTGGTCTTCACTGATAATGA+GGG - chr4.3:7078163-7078182 MS.gene000514:intron 40.0%
! GTTCCTAATTTTGCAGCATC+TGG - chr4.3:7075076-7075095 MS.gene000514:intron 40.0%
! TTTTCGAACTCAATGTGCCT+GGG + chr4.3:7078390-7078409 None:intergenic 40.0%
!! CTTTGAGATATTGAAGGGTC+CGG + chr4.3:7077719-7077738 None:intergenic 40.0%
!! GGTGTTTGTTGTGTGTTGAT+AGG - chr4.3:7075826-7075845 MS.gene000514:CDS 40.0%
!! TTTTTCGAACTCAATGTGCC+TGG + chr4.3:7078391-7078410 None:intergenic 40.0%
!!! TTTTGTCAGTTCTAAGAGGC+TGG - chr4.3:7076081-7076100 MS.gene000514:intron 40.0%
AAATTTAGCGACAGACCAGG+TGG + chr4.3:7077404-7077423 None:intergenic 45.0%
AACGTATTCGGACCTTCTGT+CGG - chr4.3:7077322-7077341 MS.gene000514:intron 45.0%
AAGAACAGAAGAATCTGGGG+AGG + chr4.3:7076966-7076985 None:intergenic 45.0%
AAGGCTGGAACCAACGTATT+CGG - chr4.3:7077310-7077329 MS.gene000514:intron 45.0%
AATCATTCAGCTACCGATGG+CGG - chr4.3:7078418-7078437 MS.gene000514:CDS 45.0%
AATGAGGTTTGAGGGTGAAG+AGG - chr4.3:7076586-7076605 MS.gene000514:CDS 45.0%
ACAACACAAGGAGGAAGAAG+AGG + chr4.3:7075774-7075793 None:intergenic 45.0%
ACAACCACCTACACAGGAAT+TGG - chr4.3:7075859-7075878 MS.gene000514:CDS 45.0%
AGTTCTCATGATACCTTCGC+GGG + chr4.3:7076990-7077009 None:intergenic 45.0%
ATGACCCGACAAAGGATCTT+AGG + chr4.3:7075235-7075254 None:intergenic 45.0%
CAACACAAGGAGGAAGAAGA+GGG + chr4.3:7075773-7075792 None:intergenic 45.0%
CAAGAATCATCGACCTTGAG+AGG - chr4.3:7077155-7077174 MS.gene000514:intron 45.0%
CACCATCAATTTCAGCGGTA+AGG + chr4.3:7075810-7075829 None:intergenic 45.0%
CCACACATGATATGCAAAGG+AGG + chr4.3:7077030-7077049 None:intergenic 45.0%
CCTCCTTTGCATATCATGTG+TGG - chr4.3:7077027-7077046 MS.gene000514:CDS 45.0%
CGGGTAAGAACAGAAGAATC+TGG + chr4.3:7076971-7076990 None:intergenic 45.0%
CTCTGGTACCAAAGTCACTT+GGG + chr4.3:7075459-7075478 None:intergenic 45.0%
CTCTTACACTGCAGAGAAGT+CGG - chr4.3:7077199-7077218 MS.gene000514:CDS 45.0%
CTTAGGACGGAGATCGTAAA+CGG + chr4.3:7075218-7075237 None:intergenic 45.0%
CTTCTAGCAGAACCACTTTG+AGG + chr4.3:7077923-7077942 None:intergenic 45.0%
GAAAAACTCACATTGGGCTC+TGG + chr4.3:7075476-7075495 None:intergenic 45.0%
GAAAGCAACGTTGATGCTGT+TGG - chr4.3:7074666-7074685 MS.gene000514:CDS 45.0%
GAGAATCATTCAGCTACCGA+TGG - chr4.3:7078415-7078434 MS.gene000514:CDS 45.0%
GAGATTCAGAAAATGAGCCC+AGG - chr4.3:7078370-7078389 MS.gene000514:intron 45.0%
GCAAACACCTCATCAGTATC+TGG + chr4.3:7075437-7075456 None:intergenic 45.0%
GCAGGGTAATGTTCCATCTT+CGG - chr4.3:7076264-7076283 MS.gene000514:CDS 45.0%
GCGGTTCAAAATGAGGTTTG+AGG - chr4.3:7076577-7076596 MS.gene000514:CDS 45.0%
GCTGTTGGAGATGCTCAAAA+TGG - chr4.3:7074681-7074700 MS.gene000514:CDS 45.0%
GGAGATGTCTCAAGGTTAGA+TGG - chr4.3:7076810-7076829 MS.gene000514:CDS 45.0%
GGCATCAAAAAGTTTCCGTG+TGG + chr4.3:7077551-7077570 None:intergenic 45.0%
GGTGATTACTCAGTGCTTCA+TGG - chr4.3:7077509-7077528 MS.gene000514:intron 45.0%
GGTTCTTCATCGTCATCAAC+AGG - chr4.3:7074702-7074721 MS.gene000514:CDS 45.0%
GTCAAAACAACCACCTACAC+AGG - chr4.3:7075853-7075872 MS.gene000514:CDS 45.0%
TAAATCCTCTTCCAATGCCC+AGG - chr4.3:7076909-7076928 MS.gene000514:intron 45.0%
TACGGAACAATAAACTCCGC+TGG + chr4.3:7076512-7076531 None:intergenic 45.0%
TAGGCATGCGGTTCAAAATG+AGG - chr4.3:7076570-7076589 MS.gene000514:CDS 45.0%
TCATCGTCATCAACAGGAAG+AGG - chr4.3:7074708-7074727 MS.gene000514:CDS 45.0%
TCCGTCCTAAGATCCTTTGT+CGG - chr4.3:7075227-7075246 MS.gene000514:CDS 45.0%
TCTAGCCATAGCATGCATCT+CGG - chr4.3:7076292-7076311 MS.gene000514:CDS 45.0%
TCTCTTGGAACCGTTACCAA+AGG + chr4.3:7074876-7074895 None:intergenic 45.0%
TGGCTAGAGATAACCGAAGA+TGG + chr4.3:7076280-7076299 None:intergenic 45.0%
TTAGGACGGAGATCGTAAAC+GGG + chr4.3:7075217-7075236 None:intergenic 45.0%
! AGAGCAGGCTCTATTTTCCA+AGG + chr4.3:7076875-7076894 None:intergenic 45.0%
! AGCAGGCTCTATTTTCCAAG+GGG + chr4.3:7076873-7076892 None:intergenic 45.0%
! CGTGGTCTTCACTGATAATG+AGG - chr4.3:7078162-7078181 MS.gene000514:intron 45.0%
! GAAGGTATGGTTCAGAGAAC+TGG - chr4.3:7077276-7077295 MS.gene000514:intron 45.0%
! GAGCAGGCTCTATTTTCCAA+GGG + chr4.3:7076874-7076893 None:intergenic 45.0%
! GTGTGGGGTGAATTGATTTC+AGG - chr4.3:7076019-7076038 MS.gene000514:intron 45.0%
!! TAACGTTGATGACCCGACAA+AGG + chr4.3:7075243-7075262 None:intergenic 45.0%
!! TTGGTAACGGTTCCAAGAGA+AGG - chr4.3:7074876-7074895 MS.gene000514:intron 45.0%
!!! CTTGGCATGCTGTTTTGACT+GGG - chr4.3:7076329-7076348 MS.gene000514:CDS 45.0%
!! TTATTAAATTATTCAAAAAA+AGG + chr4.3:7075291-7075310 None:intergenic 5.0%
!!! ATTTTTTATATTTTTTTTGT+AGG - chr4.3:7075406-7075425 MS.gene000514:CDS 5.0%
ACAGAAGAATCTGGGGAGGA+CGG + chr4.3:7076962-7076981 None:intergenic 50.0%
ACCACCTACACAGGAATTGG+TGG - chr4.3:7075862-7075881 MS.gene000514:CDS 50.0%
ACGTATTCGGACCTTCTGTC+GGG - chr4.3:7077323-7077342 MS.gene000514:intron 50.0%
AGAAAGGGATTGCGCTTGGT+AGG - chr4.3:7078035-7078054 MS.gene000514:intron 50.0%
AGCAGAGAACAAACCAGTGG+AGG + chr4.3:7075750-7075769 None:intergenic 50.0%
ATTGAAGGGTCCGGCATAGT+TGG + chr4.3:7077710-7077729 None:intergenic 50.0%
CACAAGAAAGGGATTGCGCT+TGG - chr4.3:7078031-7078050 MS.gene000514:intron 50.0%
CACTACCAAATCCCGACAGA+AGG + chr4.3:7077337-7077356 None:intergenic 50.0%
CCCGACAAAGGATCTTAGGA+CGG + chr4.3:7075231-7075250 None:intergenic 50.0%
CCGTCCTAAGATCCTTTGTC+GGG - chr4.3:7075228-7075247 MS.gene000514:CDS 50.0%
CTCAGGACGAGGTATGTTAG+AGG + chr4.3:7076843-7076862 None:intergenic 50.0%
CTCTGCAGCAAATGTCTACG+TGG + chr4.3:7076049-7076068 None:intergenic 50.0%
CTGGATGTCAATGTCAAGGC+TGG - chr4.3:7077295-7077314 MS.gene000514:intron 50.0%
GAACACCGAGATGCATGCTA+TGG + chr4.3:7076300-7076319 None:intergenic 50.0%
GACAGAAGGTCCGAATACGT+TGG + chr4.3:7077323-7077342 None:intergenic 50.0%
GAGAACAAACCAGTGGAGGA+AGG + chr4.3:7075746-7075765 None:intergenic 50.0%
GAGGGTGACATGATGCTTGT+TGG - chr4.3:7078181-7078200 MS.gene000514:CDS 50.0%
GCTCTGGTACCAAAGTCACT+TGG + chr4.3:7075460-7075479 None:intergenic 50.0%
GGTGTTTGCCCAAGTGACTT+TGG - chr4.3:7075448-7075467 MS.gene000514:CDS 50.0%
TAAAAGGCCTCGAGCTAACG+TGG - chr4.3:7076934-7076953 MS.gene000514:intron 50.0%
TCTCAGTAGCCCAACTATGC+CGG - chr4.3:7077697-7077716 MS.gene000514:intron 50.0%
TCTTCTGTTCTTACCCGCGA+AGG - chr4.3:7076974-7076993 MS.gene000514:intron 50.0%
TGAACATGAAATCGTGGCGG+AGG + chr4.3:7075642-7075661 None:intergenic 50.0%
TGATGAATGCCTTCCTCCAC+TGG - chr4.3:7075734-7075753 MS.gene000514:CDS 50.0%
TGGGGACTCTCGTATTGAGT+TGG + chr4.3:7077584-7077603 None:intergenic 50.0%
TTCCAAGGGGAAACTCTCTC+AGG + chr4.3:7076860-7076879 None:intergenic 50.0%
TTCCAATGCCCAGGCCTAAA+AGG - chr4.3:7076918-7076937 MS.gene000514:intron 50.0%
TTCTTGTGCATCTCCGCCAT+CGG + chr4.3:7078434-7078453 None:intergenic 50.0%
TTGAAGGGTCCGGCATAGTT+GGG + chr4.3:7077709-7077728 None:intergenic 50.0%
TTGGCCACCAATTCCTGTGT+AGG + chr4.3:7075869-7075888 None:intergenic 50.0%
! ACCACGAGCCAATCCTTTTG+TGG + chr4.3:7078148-7078167 None:intergenic 50.0%
! ACCCTCTGGAAACCACTAGT+GGG + chr4.3:7077125-7077144 None:intergenic 50.0%
! ACGGGAATGAGTGGCGTTTT+AGG - chr4.3:7075897-7075916 MS.gene000514:CDS 50.0%
! ACGTTAGCTCGAGGCCTTTT+AGG + chr4.3:7076935-7076954 None:intergenic 50.0%
! CGTAGACATTTGCTGCAGAG+TGG - chr4.3:7076049-7076068 MS.gene000514:intron 50.0%
! GACATTTGCTGCAGAGTGGT+TGG - chr4.3:7076053-7076072 MS.gene000514:intron 50.0%
! GGAAACCACTAGTGGGCAAA+GGG + chr4.3:7077118-7077137 None:intergenic 50.0%
! GGAAGAGGATTTAGAGCTGG+AGG + chr4.3:7076902-7076921 None:intergenic 50.0%
! GTGTGCTGGTCCTTTGGTAA+CGG - chr4.3:7074863-7074882 MS.gene000514:intron 50.0%
! TACACAGGAATTGGTGGCCA+AGG - chr4.3:7075868-7075887 MS.gene000514:CDS 50.0%
! TGGAAACCACTAGTGGGCAA+AGG + chr4.3:7077119-7077138 None:intergenic 50.0%
! TTCTAAGAGGCTGGTTGCTG+GGG - chr4.3:7076090-7076109 MS.gene000514:intron 50.0%
!! AGTTCTAAGAGGCTGGTTGC+TGG - chr4.3:7076088-7076107 MS.gene000514:intron 50.0%
!! CTCTCGTATTGAGTTGGTGG+TGG + chr4.3:7077578-7077597 None:intergenic 50.0%
!! GGACTCTCGTATTGAGTTGG+TGG + chr4.3:7077581-7077600 None:intergenic 50.0%
!! GTTCTAAGAGGCTGGTTGCT+GGG - chr4.3:7076089-7076108 MS.gene000514:intron 50.0%
!! TATTGAGTTGGTGGTGGTGG+TGG + chr4.3:7077572-7077591 None:intergenic 50.0%
!! TCCACAAAAGGATTGGCTCG+TGG - chr4.3:7078144-7078163 MS.gene000514:intron 50.0%
!! TCGTATTGAGTTGGTGGTGG+TGG + chr4.3:7077575-7077594 None:intergenic 50.0%
!!! GCTTGGCATGCTGTTTTGAC+TGG - chr4.3:7076328-7076347 MS.gene000514:CDS 50.0%
AAGCTCCCCATTCTCACCTC+TGG + chr4.3:7076215-7076234 None:intergenic 55.0%
AGGATCTGCACGGGAATGAG+TGG - chr4.3:7075888-7075907 MS.gene000514:CDS 55.0%
AGGCGTGCAATGAGACAGCA+GGG - chr4.3:7076247-7076266 MS.gene000514:CDS 55.0%
AGGGATTGCGCTTGGTAGGT+CGG - chr4.3:7078039-7078058 MS.gene000514:intron 55.0%
ATGGACCCTTTGCCCACTAG+TGG - chr4.3:7077110-7077129 MS.gene000514:intron 55.0%
CAATGGCCTGTAATGCCACC+TGG - chr4.3:7077386-7077405 MS.gene000514:CDS 55.0%
CTCATTCCCGTGCAGATCCT+TGG + chr4.3:7075888-7075907 None:intergenic 55.0%
CTTCTGCAGGACAAGTCCAG+CGG - chr4.3:7076493-7076512 MS.gene000514:CDS 55.0%
CTTGACCTTGCAAGACCCTC+TGG + chr4.3:7077139-7077158 None:intergenic 55.0%
GAACTATGGCATGCGTGTGC+TGG - chr4.3:7074849-7074868 MS.gene000514:intron 55.0%
GACAGACCAGGTGGCATTAC+AGG + chr4.3:7077395-7077414 None:intergenic 55.0%
GAGAATGGGGAGCTTCGAGT+TGG - chr4.3:7076220-7076239 MS.gene000514:CDS 55.0%
GCCACCAATTCCTGTGTAGG+TGG + chr4.3:7075866-7075885 None:intergenic 55.0%
GCCCACTAGTGGTTTCCAGA+GGG - chr4.3:7077121-7077140 MS.gene000514:intron 55.0%
GGGAGCAGAGAACAAACCAG+TGG + chr4.3:7075753-7075772 None:intergenic 55.0%
GGTTTCCAGAGGGTCTTGCA+AGG - chr4.3:7077131-7077150 MS.gene000514:intron 55.0%
GTCCTGAGAGAGTTTCCCCT+TGG - chr4.3:7076855-7076874 MS.gene000514:CDS 55.0%
GTGAAGAGGCTCCTGAGCAA+AGG - chr4.3:7076600-7076619 MS.gene000514:intron 55.0%
TCGGACCTTCTGTCGGGATT+TGG - chr4.3:7077329-7077348 MS.gene000514:intron 55.0%
TGCCCACTAGTGGTTTCCAG+AGG - chr4.3:7077120-7077139 MS.gene000514:intron 55.0%
! GACCCTCTGGAAACCACTAG+TGG + chr4.3:7077126-7077145 None:intergenic 55.0%
! TCGGTGTTCTTGCGACTGCT+TGG - chr4.3:7076311-7076330 MS.gene000514:CDS 55.0%
! TGCTTGTTGGCGACGATCCA+TGG - chr4.3:7078194-7078213 MS.gene000514:CDS 55.0%
! TTGGTGGCCAAGGATCTGCA+CGG - chr4.3:7075878-7075897 MS.gene000514:CDS 55.0%
!! GGATTTGGTAGTGCCCGTGA+AGG - chr4.3:7077344-7077363 MS.gene000514:intron 55.0%
!! TTAGGCCTGGGCATTGGAAG+AGG + chr4.3:7076917-7076936 None:intergenic 55.0%
AGAGCTGGAGGAGCAAGAGC+AGG + chr4.3:7076890-7076909 None:intergenic 60.0%
CAGGCGTGCAATGAGACAGC+AGG - chr4.3:7076246-7076265 MS.gene000514:CDS 60.0%
CTGCAGAGAAGTCGGTTGCG+TGG - chr4.3:7077207-7077226 MS.gene000514:CDS 60.0%
GGCGGAGCCAGATACTGATG+AGG - chr4.3:7075427-7075446 MS.gene000514:CDS 60.0%
GGGGAAACTCTCTCAGGACG+AGG + chr4.3:7076854-7076873 None:intergenic 60.0%
TGGTGGCCAAGGATCTGCAC+GGG - chr4.3:7075879-7075898 MS.gene000514:CDS 60.0%
! AGCTCGAGGCCTTTTAGGCC+TGG + chr4.3:7076930-7076949 None:intergenic 60.0%
! GCATGCGTGTGCTGGTCCTT+TGG - chr4.3:7074857-7074876 MS.gene000514:intron 60.0%
! GCTCGAGGCCTTTTAGGCCT+GGG + chr4.3:7076929-7076948 None:intergenic 60.0%
! GGCCTTTTAGGCCTGGGCAT+TGG + chr4.3:7076923-7076942 None:intergenic 60.0%
! TGAAATCGTGGCGGAGGAGC+AGG + chr4.3:7075636-7075655 None:intergenic 60.0%
!! GGGAGCTTCGAGTTGGTGTC+AGG - chr4.3:7076227-7076246 MS.gene000514:CDS 60.0%
GACGGCACCACGTTAGCTCG+AGG + chr4.3:7076944-7076963 None:intergenic 65.0%
! AATCGTGGCGGAGGAGCAGG+TGG + chr4.3:7075633-7075652 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 7074615 7078492 7074615 ID=MS.gene000514
chr4.3 mRNA 7074615 7078492 7074615 ID=MS.gene000514.t1;Parent=MS.gene000514
chr4.3 exon 7078378 7078492 7078378 ID=MS.gene000514.t1.exon1;Parent=MS.gene000514.t1
chr4.3 CDS 7078378 7078492 7078378 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7078169 7078281 7078169 ID=MS.gene000514.t1.exon2;Parent=MS.gene000514.t1
chr4.3 CDS 7078169 7078281 7078169 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7077837 7077932 7077837 ID=MS.gene000514.t1.exon3;Parent=MS.gene000514.t1
chr4.3 CDS 7077837 7077932 7077837 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7077623 7077679 7077623 ID=MS.gene000514.t1.exon4;Parent=MS.gene000514.t1
chr4.3 CDS 7077623 7077679 7077623 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7077352 7077507 7077352 ID=MS.gene000514.t1.exon5;Parent=MS.gene000514.t1
chr4.3 CDS 7077352 7077507 7077352 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7077175 7077259 7077175 ID=MS.gene000514.t1.exon6;Parent=MS.gene000514.t1
chr4.3 CDS 7077175 7077259 7077175 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7076976 7077066 7076976 ID=MS.gene000514.t1.exon7;Parent=MS.gene000514.t1
chr4.3 CDS 7076976 7077066 7076976 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7076727 7076891 7076727 ID=MS.gene000514.t1.exon8;Parent=MS.gene000514.t1
chr4.3 CDS 7076727 7076891 7076727 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7076486 7076605 7076486 ID=MS.gene000514.t1.exon9;Parent=MS.gene000514.t1
chr4.3 CDS 7076486 7076605 7076486 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7076112 7076359 7076112 ID=MS.gene000514.t1.exon10;Parent=MS.gene000514.t1
chr4.3 CDS 7076112 7076359 7076112 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7075155 7076014 7075155 ID=MS.gene000514.t1.exon11;Parent=MS.gene000514.t1
chr4.3 CDS 7075155 7076014 7075155 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7074889 7075079 7074889 ID=MS.gene000514.t1.exon12;Parent=MS.gene000514.t1
chr4.3 CDS 7074889 7075079 7074889 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
chr4.3 exon 7074615 7074783 7074615 ID=MS.gene000514.t1.exon13;Parent=MS.gene000514.t1
chr4.3 CDS 7074615 7074783 7074615 ID=cds.MS.gene000514.t1;Parent=MS.gene000514.t1
Gene Sequence

>MS.gene000514

ATGGCATCATCAGAAGTATCTATGAAGGGAAATTCTGTCAACGGAAAAGGTGAAAGCAACGTTGATGCTGTTGGAGATGCTCAAAATGGTTCTTCATCGTCATCAACAGGAAGAGGTAACAACTTACAACGTTAACATGGTTTTCTTTGTAATTAAAGGTTTCTTTTAACAAATTTATGGAGTGATAATGTTTTTAATTTTATTTTTTCAGAAGCTGAAGCTGCACTTTACAGAGAACTATGGCATGCGTGTGCTGGTCCTTTGGTAACGGTTCCAAGAGAAGGAGAACTTGTGTTCTATTTTCCACAAGGACATATTGAACAGGTAACACAAAACATTACCTATTTTCCGACAATTTTCTTTCATGGTTTGGTTCTTGTTCTGTTTAGTTAAGTCCGTTACTCATGTTACCGGTTTATCTCTGTGTCTCAACTCAGATTTGTCACACTTAACTCGTTTTGGTTCCTAATTTTGCAGCATCTGGGTTTTTTCTTTTTATATTAGAATTAGAGTTATTATGATGATGATTATGCTGAAATTAACATAATTCAATGCATTAGGTGGAAGCTTCGACAAATCAAGCATCGGAACAACACATGCCCGTTTACGATCTCCGTCCTAAGATCCTTTGTCGGGTCATCAACGTTATGCTAAAGGTGAATTTTCCTCTTTTCCTTTTTTTGAATAATTTAATAAATTCCTTTCTTTTTCTAACAGTAACACAGTTGTTTTGTTTGTGTAATTATAAAATAAAATACAATTACAATTATTTATCTTTTAATTATTGATTAATTTTTTATATTTTTTTTGTAGGCGGAGCCAGATACTGATGAGGTGTTTGCCCAAGTGACTTTGGTACCAGAGCCCAATGTGAGTTTTTCGGCTAATTTTCTTTTAGTTTCTTTGGTTTGGAGTAACAAACACAGCATGTTCTAATTTTTTTTTTATTTGTTGTTTTTGATTGTGGATCTGGATGATATTGTAGCAAGATGAAAATGCTGTTGAGAAAGAAGCTCCACCTGCTCCTCCGCCACGATTTCATGTTCATTCGTTTTGTAAAACATTGACTGCATCTGATACTAGTACTCATGGTGGTTTTTCTGTACTTAGACGTCATGCTGATGAATGCCTTCCTCCACTGGTTTGTTCTCTGCTCCCTCTTCTTCCTCCTTGTGTTGTTTAATTGTTTTTTCCTTACCGCTGAAATTGATGGTGTTTGTTGTGTGTTGATAGGATATGTCAAAACAACCACCTACACAGGAATTGGTGGCCAAGGATCTGCACGGGAATGAGTGGCGTTTTAGGCATATTTTTCGCGGTAATTACTAGTTCATCTTCAACTGTTGACCACTTGATTTATTTTGTATTCATTTTTGTTCATATTTTGTTTTTGTTGTGTTTGATGTGTGGGGTGAATTGATTTCAGGTCAACCACGTAGACATTTGCTGCAGAGTGGTTGGAGTGTTTTTGTCAGTTCTAAGAGGCTGGTTGCTGGGGATGCATTTATATTTCTAAGGTTTGCTTATTTGTTATAACATCGCTTTTGAATTAGTGTTTTTTGTTATTGTTGGTGTTTTTGACTAATTTAGAAATTTTCCAGAGGTGAGAATGGGGAGCTTCGAGTTGGTGTCAGGCGTGCAATGAGACAGCAGGGTAATGTTCCATCTTCGGTTATCTCTAGCCATAGCATGCATCTCGGTGTTCTTGCGACTGCTTGGCATGCTGTTTTGACTGGGACCATGTTCACTGTTTATTACAAACCCCGGTATGAAAATTGTTCTAAAACCATGTCTGCTCTGTTCAAACTATTAACTAATTTGTGTTCTTTCTGATTGATTTCGCTCGGCAGTAAGTTTACACCGTTCTTGCTCATATTTCTTCTGCAGGACAAGTCCAGCGGAGTTTATTGTTCCGTATGATCAATACATGGAGTCTCTAAAAAATAATTATACAATAGGCATGCGGTTCAAAATGAGGTTTGAGGGTGAAGAGGCTCCTGAGCAAAGGTATGAATGATCAATACATTAATGTCTTTTTTCTCTGATTAAGTTTTAATGTTGCTACTGCTTGCTGATTTTGCCTTTTTATTCTTTATCTAATAGTTTATTTTGATCTGGTTTTTGTATTTGTAGGTTTACAGGTACCATTGTTGGCATTGAAGACTCTGACTCCAAAAGATGGCCAACATCTAAATGGAGATGTCTCAAGGTTAGATGGGATGAGACCTCTAACATACCTCGTCCTGAGAGAGTTTCCCCTTGGAAAATAGAGCCTGCTCTTGCTCCTCCAGCTCTAAATCCTCTTCCAATGCCCAGGCCTAAAAGGCCTCGAGCTAACGTGGTGCCGTCCTCCCCAGATTCTTCTGTTCTTACCCGCGAAGGTATCATGAGAACTTTATATTTCTAAGAATTCCTCCTTTGCATATCATGTGTGGTTTTTGTGTGGAGCCTGATTTGTTTTTGTTGATCAATTAACAGCATCGTCAAAAGTATGCATGGACCCTTTGCCCACTAGTGGTTTCCAGAGGGTCTTGCAAGGTCAAGAATCATCGACCTTGAGAGGAAATTTGGCTGAAAGCAACGACTCTTACACTGCAGAGAAGTCGGTTGCGTGGACTCCTGCAACTGATGAAGAAAAGATGGATGCTGTTTCTACTTCAAGAAGGTATGGTTCAGAGAACTGGATGTCAATGTCAAGGCTGGAACCAACGTATTCGGACCTTCTGTCGGGATTTGGTAGTGCCCGTGAAGGCAAACATAACATGCTTACTCAATGGCCTGTAATGCCACCTGGTCTGTCGCTAAATTTCTTGCACTCTAATATGAAAGGTTCTGCACAAGGCAGTGATAATGCAACTTACCAAGCTCAAGGTAATATGAGATACAGTGCATTTGGTGATTACTCAGTGCTTCATGGACATAAAGTTGAAAATCCACACGGAAACTTTTTGATGCCACCACCACCACCAACTCAATACGAGAGTCCCCATTCTACAGAATCGTCACAGAAACAAATGTCTTCAAAAACAAGCGAGGCTGCAAAACCGAAAGACAGTGACTGTAAGCTATTCGGCTTCTCGCTTCTCAGTAGCCCAACTATGCCGGACCCTTCAATATCTCAAAGAAATGTTACAAACGAGACTTCTAGTCCCATGCAAATTTCATCACAACATCACACATTTGAAAATGATCAGAAGTCTGAACATTCAAAGAGCTTCAAACCAGCAGATAAACTAGTCATAGTTGATGAGCACGAGAAGCAGTTGCAAACTTCTCAGCCTCATGTTAAAGATGTTCAACTCAAACCTCAAAGTGGTTCTGCTAGAAGCTGCACAAAAGTAAGTATCTGCATTGTTATTGTTACCTTTTTGACAATAAACTAGAGATTAATAACGAAATGATTCTTATTTAAGGTTCACAAGAAAGGGATTGCGCTTGGTAGGTCGGTTGATCTTACAAAGTTTAGTGACTATGATGAATTAACCGCTGAATTGGATCAGCTATTTGAATTTGGAGGTGAACTAATATCTCCACAAAAGGATTGGCTCGTGGTCTTCACTGATAATGAGGGTGACATGATGCTTGTTGGCGACGATCCATGGCAGTAAGTATCACCATTTATAGTTCTCTGATTACCCTTTTTAATTGATTTTTTTTCCCTTTCTCAAGAATAACCTTATTTGTATTATTTTTGTGTACTCAAAATCAGGGAGTTTTGTTCAATGGTTCGCAAAATTTACATCTACCCCAAAGAAGAGATTCAGAAAATGAGCCCAGGCACATTGAGTTCGAAAAATGAAGAGAATCATTCAGCTACCGATGGCGGAGATGCACAAGAAACTAAATCTCAGCTGAATCAATCAGCTTCAGATAATTGA
Protein sequence

>MS.gene000514.t1

MASSEVSMKGNSVNGKGESNVDAVGDAQNGSSSSSTGREAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRANVVPSSPDSSVLTREASSKVCMDPLPTSGFQRVLQGQESSTLRGNLAESNDSYTAEKSVAWTPATDEEKMDAVSTSRRYGSENWMSMSRLEPTYSDLLSGFGSAREGKHNMLTQWPVMPPGLSLNFLHSNMKGSAQGSDNATYQAQGNMRYSAFGDYSVLHGHKVENPHGNFLMPPPPPTQYESPHSTESSQKQMSSKTSEAAKPKDSDCKLFGFSLLSSPTMPDPSISQRNVTNETSSPMQISSQHHTFENDQKSEHSKSFKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFGGELISPQKDWLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGTLSSKNEENHSATDGGDAQETKSQLNQSASDN