Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000569.t1 | Q4VYC8.1 | 96.4 | 554 | 20 | 0 | 1 | 554 | 1 | 554 | 1.80E-268 | 934.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000569.t1 | Q4VYC8 | 96.4 | 554 | 20 | 0 | 1 | 554 | 1 | 554 | 4.2e-271 | 934.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000569.t1 | A0A396GDF6 | 96.4 | 554 | 20 | 0 | 1 | 554 | 53 | 606 | 1.3e-268 | 934.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene000569.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000569.t1 | MTR_8g020840 | 97.653 | 554 | 13 | 0 | 1 | 554 | 1 | 554 | 0.0 | 1127 |
MS.gene000569.t1 | MTR_4g097080 | 32.405 | 395 | 234 | 11 | 167 | 548 | 129 | 503 | 3.55e-52 | 186 |
MS.gene000569.t1 | MTR_5g015490 | 30.617 | 405 | 238 | 12 | 165 | 548 | 108 | 490 | 2.87e-43 | 161 |
MS.gene000569.t1 | MTR_2g099110 | 26.964 | 471 | 279 | 15 | 111 | 548 | 13 | 451 | 5.54e-38 | 145 |
MS.gene000569.t1 | MTR_5g015950 | 26.402 | 428 | 251 | 12 | 169 | 547 | 33 | 445 | 4.27e-32 | 129 |
MS.gene000569.t1 | MTR_3g053270 | 26.402 | 428 | 251 | 12 | 169 | 547 | 33 | 445 | 4.27e-32 | 129 |
MS.gene000569.t1 | MTR_4g095500 | 27.356 | 435 | 246 | 13 | 164 | 547 | 52 | 467 | 4.40e-31 | 126 |
MS.gene000569.t1 | MTR_2g089100 | 25.485 | 412 | 265 | 11 | 164 | 547 | 45 | 442 | 8.55e-31 | 125 |
MS.gene000569.t1 | MTR_1g029420 | 25.377 | 398 | 257 | 14 | 166 | 548 | 220 | 592 | 3.33e-27 | 116 |
MS.gene000569.t1 | MTR_2g026250 | 24.874 | 398 | 253 | 14 | 169 | 548 | 227 | 596 | 5.16e-27 | 115 |
MS.gene000569.t1 | MTR_3g056110 | 26.000 | 400 | 246 | 15 | 169 | 548 | 173 | 542 | 8.87e-26 | 111 |
MS.gene000569.t1 | MTR_3g065980 | 24.623 | 398 | 251 | 9 | 172 | 549 | 173 | 541 | 1.29e-23 | 105 |
MS.gene000569.t1 | MTR_4g133660 | 24.500 | 400 | 251 | 13 | 169 | 547 | 173 | 542 | 5.39e-23 | 103 |
MS.gene000569.t1 | MTR_5g097480 | 25.871 | 402 | 244 | 15 | 169 | 548 | 175 | 544 | 4.20e-22 | 100 |
MS.gene000569.t1 | MTR_7g062120 | 24.107 | 448 | 284 | 15 | 130 | 548 | 320 | 740 | 1.13e-21 | 99.8 |
MS.gene000569.t1 | MTR_4g104020 | 24.641 | 418 | 265 | 13 | 153 | 548 | 131 | 520 | 1.13e-21 | 99.0 |
MS.gene000569.t1 | MTR_5g094450 | 24.688 | 401 | 254 | 15 | 169 | 548 | 159 | 532 | 2.24e-21 | 98.2 |
MS.gene000569.t1 | MTR_7g027190 | 23.342 | 407 | 252 | 11 | 170 | 548 | 299 | 673 | 7.58e-21 | 97.1 |
MS.gene000569.t1 | MTR_3g089055 | 23.383 | 402 | 266 | 15 | 163 | 548 | 195 | 570 | 1.33e-20 | 95.9 |
MS.gene000569.t1 | MTR_3g089055 | 23.383 | 402 | 266 | 15 | 163 | 548 | 190 | 565 | 1.34e-20 | 95.9 |
MS.gene000569.t1 | MTR_7g074650 | 24.289 | 387 | 244 | 11 | 175 | 548 | 442 | 792 | 2.72e-20 | 95.5 |
MS.gene000569.t1 | MTR_4g077760 | 25.606 | 371 | 247 | 10 | 185 | 548 | 207 | 555 | 5.73e-20 | 94.0 |
MS.gene000569.t1 | MTR_2g097467 | 25.313 | 399 | 242 | 15 | 171 | 547 | 289 | 653 | 8.25e-18 | 87.4 |
MS.gene000569.t1 | MTR_2g097410 | 24.615 | 390 | 247 | 13 | 160 | 524 | 360 | 727 | 1.06e-17 | 87.0 |
MS.gene000569.t1 | MTR_4g064160 | 24.059 | 478 | 300 | 16 | 103 | 547 | 236 | 683 | 3.67e-17 | 85.5 |
MS.gene000569.t1 | MTR_2g034260 | 20.388 | 412 | 290 | 10 | 155 | 549 | 195 | 585 | 4.18e-17 | 85.1 |
MS.gene000569.t1 | MTR_1g069725 | 24.570 | 407 | 255 | 13 | 156 | 547 | 93 | 462 | 8.89e-17 | 83.6 |
MS.gene000569.t1 | MTR_8g442410 | 22.169 | 415 | 275 | 13 | 155 | 549 | 140 | 526 | 2.65e-16 | 82.4 |
MS.gene000569.t1 | MTR_2g034250 | 20.301 | 399 | 281 | 10 | 168 | 549 | 208 | 586 | 6.36e-16 | 81.3 |
MS.gene000569.t1 | MTR_3g072710 | 24.205 | 409 | 271 | 12 | 160 | 547 | 109 | 499 | 1.95e-15 | 79.3 |
MS.gene000569.t1 | MTR_4g064150 | 23.560 | 382 | 241 | 12 | 171 | 524 | 361 | 719 | 3.97e-15 | 79.0 |
MS.gene000569.t1 | MTR_2g097310 | 24.458 | 507 | 312 | 18 | 69 | 547 | 174 | 637 | 4.30e-15 | 79.0 |
MS.gene000569.t1 | MTR_2g097473 | 22.506 | 431 | 276 | 14 | 139 | 547 | 259 | 653 | 5.77e-15 | 78.6 |
MS.gene000569.t1 | MTR_2g097463 | 22.222 | 423 | 279 | 11 | 144 | 547 | 263 | 654 | 8.26e-15 | 77.8 |
MS.gene000569.t1 | MTR_4g064120 | 25.510 | 392 | 241 | 15 | 171 | 539 | 254 | 617 | 1.76e-14 | 76.6 |
MS.gene000569.t1 | MTR_4g076020 | 23.177 | 384 | 243 | 11 | 175 | 548 | 88 | 429 | 2.45e-14 | 75.9 |
MS.gene000569.t1 | MTR_4g064200 | 22.901 | 393 | 260 | 12 | 171 | 547 | 284 | 649 | 4.13e-14 | 75.9 |
MS.gene000569.t1 | MTR_4g064180 | 24.742 | 388 | 229 | 15 | 171 | 524 | 254 | 612 | 5.11e-14 | 75.5 |
MS.gene000569.t1 | MTR_3g085310 | 78.947 | 38 | 8 | 0 | 478 | 515 | 21 | 58 | 1.05e-13 | 66.6 |
MS.gene000569.t1 | MTR_2g034280 | 20.596 | 403 | 282 | 11 | 163 | 549 | 196 | 576 | 1.22e-12 | 70.9 |
MS.gene000569.t1 | MTR_2g097390 | 24.181 | 397 | 250 | 11 | 171 | 547 | 275 | 640 | 1.26e-12 | 70.9 |
MS.gene000569.t1 | MTR_4g076140 | 23.947 | 451 | 259 | 16 | 165 | 551 | 42 | 472 | 2.38e-12 | 69.7 |
MS.gene000569.t1 | MTR_2g097380 | 30.612 | 147 | 82 | 4 | 178 | 324 | 231 | 357 | 2.10e-11 | 67.0 |
MS.gene000569.t1 | MTR_2g097350 | 22.646 | 393 | 261 | 11 | 171 | 547 | 274 | 639 | 6.34e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000569.t1 | AT3G13840 | 50.991 | 555 | 214 | 12 | 2 | 548 | 6 | 510 | 6.23e-177 | 509 |
MS.gene000569.t1 | AT3G49950 | 30.221 | 407 | 239 | 11 | 164 | 547 | 23 | 407 | 4.39e-44 | 162 |
MS.gene000569.t1 | AT4G37650 | 29.975 | 407 | 251 | 13 | 162 | 548 | 137 | 529 | 5.55e-43 | 161 |
MS.gene000569.t1 | AT3G03450 | 27.390 | 387 | 248 | 10 | 172 | 549 | 184 | 546 | 1.87e-31 | 128 |
MS.gene000569.t1 | AT5G17490 | 26.972 | 393 | 246 | 10 | 170 | 552 | 159 | 520 | 1.04e-28 | 120 |
MS.gene000569.t1 | AT4G17230 | 25.879 | 398 | 249 | 14 | 169 | 548 | 156 | 525 | 6.20e-27 | 115 |
MS.gene000569.t1 | AT4G17230 | 25.879 | 398 | 249 | 14 | 169 | 548 | 156 | 525 | 6.20e-27 | 115 |
MS.gene000569.t1 | AT5G48150 | 26.010 | 396 | 246 | 13 | 172 | 548 | 123 | 490 | 1.90e-24 | 107 |
MS.gene000569.t1 | AT5G48150 | 26.010 | 396 | 246 | 13 | 172 | 548 | 123 | 490 | 1.90e-24 | 107 |
MS.gene000569.t1 | AT5G48150 | 26.010 | 396 | 246 | 13 | 172 | 548 | 123 | 490 | 1.90e-24 | 107 |
MS.gene000569.t1 | AT5G48150 | 26.010 | 396 | 246 | 13 | 172 | 548 | 123 | 490 | 1.90e-24 | 107 |
MS.gene000569.t1 | AT5G59450 | 25.590 | 551 | 324 | 21 | 39 | 548 | 93 | 598 | 1.31e-23 | 105 |
MS.gene000569.t1 | AT1G66350 | 25.128 | 390 | 246 | 12 | 172 | 551 | 156 | 509 | 2.71e-23 | 103 |
MS.gene000569.t1 | AT1G14920 | 25.128 | 390 | 248 | 11 | 172 | 549 | 173 | 530 | 4.31e-23 | 103 |
MS.gene000569.t1 | AT5G66770 | 26.804 | 388 | 243 | 12 | 175 | 548 | 224 | 584 | 2.40e-22 | 101 |
MS.gene000569.t1 | AT2G29065 | 25.505 | 396 | 256 | 10 | 171 | 547 | 252 | 627 | 1.31e-21 | 99.4 |
MS.gene000569.t1 | AT1G21450 | 24.557 | 395 | 259 | 15 | 169 | 548 | 223 | 593 | 2.96e-21 | 98.2 |
MS.gene000569.t1 | AT2G01570 | 24.103 | 390 | 252 | 11 | 172 | 549 | 225 | 582 | 7.02e-21 | 97.1 |
MS.gene000569.t1 | AT1G50600 | 26.799 | 403 | 235 | 16 | 171 | 548 | 159 | 526 | 1.88e-20 | 95.1 |
MS.gene000569.t1 | AT1G50600 | 26.799 | 403 | 235 | 16 | 171 | 548 | 234 | 601 | 2.94e-20 | 95.1 |
MS.gene000569.t1 | AT1G50600 | 26.799 | 403 | 235 | 16 | 171 | 548 | 230 | 597 | 3.02e-20 | 95.1 |
MS.gene000569.t1 | AT3G54220 | 24.936 | 393 | 235 | 14 | 175 | 547 | 297 | 649 | 2.82e-19 | 92.0 |
MS.gene000569.t1 | AT1G07520 | 24.056 | 503 | 326 | 13 | 79 | 547 | 48 | 528 | 2.87e-19 | 91.7 |
MS.gene000569.t1 | AT1G07520 | 24.056 | 503 | 326 | 13 | 79 | 547 | 48 | 528 | 2.87e-19 | 91.7 |
MS.gene000569.t1 | AT1G07520 | 24.056 | 503 | 326 | 13 | 79 | 547 | 212 | 692 | 2.94e-19 | 92.0 |
MS.gene000569.t1 | AT1G07520 | 24.056 | 503 | 326 | 13 | 79 | 547 | 213 | 693 | 3.36e-19 | 92.0 |
MS.gene000569.t1 | AT3G50650 | 25.532 | 376 | 234 | 9 | 191 | 548 | 195 | 542 | 8.44e-19 | 90.1 |
MS.gene000569.t1 | AT5G52510 | 26.316 | 323 | 197 | 10 | 249 | 548 | 336 | 640 | 4.93e-17 | 85.1 |
MS.gene000569.t1 | AT1G07530 | 25.000 | 432 | 274 | 16 | 137 | 547 | 362 | 764 | 9.21e-17 | 84.3 |
MS.gene000569.t1 | AT1G50420 | 23.195 | 457 | 256 | 17 | 165 | 551 | 51 | 482 | 1.48e-16 | 82.8 |
MS.gene000569.t1 | AT5G41920 | 25.495 | 404 | 246 | 16 | 164 | 548 | 33 | 400 | 3.13e-16 | 81.3 |
MS.gene000569.t1 | AT3G46600 | 24.279 | 416 | 237 | 15 | 171 | 552 | 212 | 583 | 9.97e-14 | 74.3 |
MS.gene000569.t1 | AT3G46600 | 24.279 | 416 | 237 | 15 | 171 | 552 | 4 | 375 | 1.81e-13 | 72.8 |
MS.gene000569.t1 | AT3G46600 | 24.279 | 416 | 237 | 15 | 171 | 552 | 180 | 551 | 2.22e-13 | 73.2 |
MS.gene000569.t1 | AT1G55580 | 24.367 | 316 | 200 | 11 | 251 | 548 | 151 | 445 | 2.66e-12 | 69.3 |
MS.gene000569.t1 | AT1G63100 | 22.573 | 412 | 249 | 17 | 171 | 547 | 252 | 628 | 5.62e-12 | 68.9 |
MS.gene000569.t1 | AT1G63100 | 22.573 | 412 | 249 | 17 | 171 | 547 | 277 | 653 | 5.87e-12 | 68.9 |
Find 145 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTTTCTTCCCATCATTCT+TGG | 0.073763 | 8.2:-74261890 | MS.gene000569:CDS |
CCACATGGACCTACTGAAAA+TGG | 0.157298 | 8.2:+74260956 | None:intergenic |
TATCTGCAGATTGACATTTA+AGG | 0.180511 | 8.2:+74260895 | None:intergenic |
TCTTAAGTCTCTTGTTCTTT+TGG | 0.246051 | 8.2:+74261611 | None:intergenic |
GGGTTTGCAGGGGAAGTATT+TGG | 0.246526 | 8.2:-74260464 | MS.gene000569:CDS |
CTGTTTCTTTCTGTTCTTTG+TGG | 0.248275 | 8.2:-74260331 | MS.gene000569:CDS |
AAAATGGGGTCTCCATATTT+TGG | 0.254033 | 8.2:+74260972 | None:intergenic |
TTTCTGTTCTTTGTGGAAAC+TGG | 0.270808 | 8.2:-74260324 | MS.gene000569:CDS |
TGTGGTGATACTTTCTCTTC+TGG | 0.297286 | 8.2:-74260938 | MS.gene000569:CDS |
TCAAGAATGTGATCTGGTTT+TGG | 0.299945 | 8.2:+74261931 | None:intergenic |
CATTGAAAATGACCAAAATA+TGG | 0.300761 | 8.2:-74260984 | MS.gene000569:CDS |
TGGATGTAACCATTGTTATA+TGG | 0.301517 | 8.2:+74261862 | None:intergenic |
TGAACTGAGCACAGACAATA+AGG | 0.307645 | 8.2:+74260804 | None:intergenic |
TTATTGTCTGTGCTCAGTTC+AGG | 0.312907 | 8.2:-74260802 | MS.gene000569:CDS |
ATTCAGATTTCCACCGGTTA+TGG | 0.314217 | 8.2:+74261417 | None:intergenic |
AATTAGTATTGGCATCAATT+TGG | 0.314452 | 8.2:+74261794 | None:intergenic |
TCACTTAATATTACCCCTTT+AGG | 0.320054 | 8.2:+74260710 | None:intergenic |
CACGAAGAGTGGAGTACTTA+TGG | 0.327317 | 8.2:-74260634 | MS.gene000569:CDS |
TAAGGAAGTATGATAACAAT+TGG | 0.334184 | 8.2:-74260409 | MS.gene000569:CDS |
GGTACTGGTTACTTATATCT+TGG | 0.359164 | 8.2:+74261815 | None:intergenic |
CACATTCTTGACTGGCTTGA+AGG | 0.362157 | 8.2:-74261919 | MS.gene000569:CDS |
ATGAAAGAAGCAGGGTTTGC+AGG | 0.378552 | 8.2:-74260476 | MS.gene000569:CDS |
CACAAAGAACAGAAAGAAAC+AGG | 0.382192 | 8.2:+74260332 | None:intergenic |
ATGACGAAGATGAAGATAAA+TGG | 0.385639 | 8.2:+74261296 | None:intergenic |
ATTGTTACTGTTACTTCCAT+TGG | 0.386351 | 8.2:+74261495 | None:intergenic |
GGGACGGTGGTTAGAAAATC+TGG | 0.389102 | 8.2:-74261544 | MS.gene000569:CDS |
ACTTTCTCTTCTGGACTCCT+TGG | 0.394777 | 8.2:-74260929 | MS.gene000569:CDS |
CCGATGAATGAAAGTGATAA+TGG | 0.406397 | 8.2:-74261583 | MS.gene000569:CDS |
CACATGGACCTACTGAAAAT+GGG | 0.406448 | 8.2:+74260957 | None:intergenic |
TTTGGAGAGGATGCAATTGA+TGG | 0.410953 | 8.2:-74260446 | MS.gene000569:CDS |
TCTTCGGCATTTCGTTTCTT+CGG | 0.417116 | 8.2:+74261664 | None:intergenic |
AGAAACTCACTTCTTTCATC+AGG | 0.418712 | 8.2:+74260755 | None:intergenic |
ATAGTACAAGTGTGGAACTA+TGG | 0.422556 | 8.2:-74260367 | MS.gene000569:CDS |
TTTCTTCGGCAAATCTGAAA+AGG | 0.422754 | 8.2:+74261678 | None:intergenic |
CTCCACTCTTCGTGAGAATC+CGG | 0.423835 | 8.2:+74260643 | None:intergenic |
TTTGAGACTTAATTCATCTT+CGG | 0.425894 | 8.2:+74261648 | None:intergenic |
GATTCCATATCTCATACTCT+TGG | 0.427654 | 8.2:+74261842 | None:intergenic |
CCTTGTGCTGTAGCCATAAC+CGG | 0.430036 | 8.2:-74261430 | MS.gene000569:CDS |
GAAGCATTTGCTATGTTACT+AGG | 0.433616 | 8.2:+74261175 | None:intergenic |
AAGCCGGTGGTTGGCATCGC+CGG | 0.433916 | 8.2:+74261348 | None:intergenic |
TCTTCGTCATCTACCCCATC+AGG | 0.437019 | 8.2:-74261283 | MS.gene000569:CDS |
GGTATGTTGTTAGAACTATT+AGG | 0.437816 | 8.2:+74261700 | None:intergenic |
CAGTAACAATGGAAACAATA+AGG | 0.442067 | 8.2:-74261482 | MS.gene000569:CDS |
TGAGAGGCATGGAGCCTAAA+GGG | 0.443623 | 8.2:-74260724 | MS.gene000569:CDS |
AATGGAGATGCAGCTCTTGA+AGG | 0.456048 | 8.2:-74261565 | MS.gene000569:CDS |
TATTGGCATCAATTTGGTAC+TGG | 0.457250 | 8.2:+74261800 | None:intergenic |
ATGGAGGTCGAGCTTTGTTA+AGG | 0.458730 | 8.2:-74260427 | MS.gene000569:CDS |
TGAAGGGTGCGCAAATTGTT+CGG | 0.463218 | 8.2:+74261127 | None:intergenic |
AACCACCGGCTTGCAGCGCA+TGG | 0.464860 | 8.2:-74261337 | MS.gene000569:CDS |
CAGACAATAAGGGTTTCATC+AGG | 0.467867 | 8.2:+74260815 | None:intergenic |
TGTGAAAGAATGAAAGAAGC+AGG | 0.479878 | 8.2:-74260485 | MS.gene000569:CDS |
CCATTATCACTTTCATTCAT+CGG | 0.481330 | 8.2:+74261583 | None:intergenic |
GGCATTAGAAGAATTAGTAT+TGG | 0.481797 | 8.2:+74261783 | None:intergenic |
ATTTGCTATGTTACTAGGAA+AGG | 0.483089 | 8.2:+74261180 | None:intergenic |
AAGGAAGTATGATAACAATT+GGG | 0.487490 | 8.2:-74260408 | MS.gene000569:CDS |
ATGCGCTGCAAGCCGGTGGT+TGG | 0.488488 | 8.2:+74261339 | None:intergenic |
TATGGATCATCCAAGAATGA+TGG | 0.488884 | 8.2:+74261880 | None:intergenic |
AACCAGATCACATTCTTGAC+TGG | 0.494848 | 8.2:-74261927 | MS.gene000569:CDS |
CTTGACATTGGAGTCTCTCA+TGG | 0.497221 | 8.2:-74261100 | MS.gene000569:CDS |
TGAAAGAAGCAGGGTTTGCA+GGG | 0.503859 | 8.2:-74260475 | MS.gene000569:CDS |
ACATCCAAGAGTATGAGATA+TGG | 0.506767 | 8.2:-74261846 | MS.gene000569:CDS |
AGCCAGTCAAGAATGTGATC+TGG | 0.508834 | 8.2:+74261925 | None:intergenic |
TTCAGCTAGAACTTGAAGAA+TGG | 0.511790 | 8.2:+74261153 | None:intergenic |
TTCTCCTTTCATCACTGTCA+CGG | 0.512017 | 8.2:+74260576 | None:intergenic |
TTCTTCGGCAAATCTGAAAA+GGG | 0.512552 | 8.2:+74261679 | None:intergenic |
AATGTTAGTTGTGCTGTTTG+TGG | 0.520846 | 8.2:+74261762 | None:intergenic |
GAAGACCATGCGCTGCAAGC+CGG | 0.522939 | 8.2:+74261332 | None:intergenic |
TTAGCATTCAATGTCTGCAA+TGG | 0.523978 | 8.2:+74260854 | None:intergenic |
TCCACCAGGTCGACGACTCA+AGG | 0.527743 | 8.2:+74261051 | None:intergenic |
CTCCAATGTCAAGGATGTGA+AGG | 0.528283 | 8.2:+74261110 | None:intergenic |
CAAAAGTTATAGTCCCTGAT+GGG | 0.531586 | 8.2:+74261269 | None:intergenic |
ATGGAGATGCAGCTCTTGAA+GGG | 0.536419 | 8.2:-74261564 | MS.gene000569:CDS |
TTGAGAGGCATGGAGCCTAA+AGG | 0.536843 | 8.2:-74260725 | MS.gene000569:CDS |
CCGGTTATGGCTACAGCACA+AGG | 0.536994 | 8.2:+74261430 | None:intergenic |
CACACGATTCAGATTTCCAC+CGG | 0.537218 | 8.2:+74261411 | None:intergenic |
AAATCTGGTGGGAACAAGAA+AGG | 0.541486 | 8.2:-74261529 | MS.gene000569:CDS |
TGTTAGAACTATTAGGCTCA+AGG | 0.546508 | 8.2:+74261707 | None:intergenic |
TCCTTTCGTTCATTTCACGC+TGG | 0.552507 | 8.2:+74260519 | None:intergenic |
ATGGATCATCCAAGAATGAT+GGG | 0.553522 | 8.2:+74261881 | None:intergenic |
GACAATAAGGGTTTCATCAG+GGG | 0.554995 | 8.2:+74260817 | None:intergenic |
CTACCGGCGATGCCAACCAC+CGG | 0.555240 | 8.2:-74261351 | MS.gene000569:CDS |
GAACAAGAAAGGTGCAGCTA+AGG | 0.556763 | 8.2:-74261518 | MS.gene000569:CDS |
AAGAGGCATTAACGACAGTA+AGG | 0.559463 | 8.2:+74261011 | None:intergenic |
GTTGGCATCGCCGGTAGTTG+AGG | 0.559671 | 8.2:+74261357 | None:intergenic |
ACAAGAGGAGGAGGTCCACC+AGG | 0.563233 | 8.2:+74261037 | None:intergenic |
CAGTGATGAAAGGAGAATGA+TGG | 0.563415 | 8.2:-74260570 | MS.gene000569:CDS |
TCTGAAGGTGTTGAGAGGCA+TGG | 0.564144 | 8.2:-74260735 | MS.gene000569:CDS |
ATGTTGAGCTTGAACTACTC+TGG | 0.564625 | 8.2:+74260293 | None:intergenic |
ATGGAAACAATAAGGATGGT+AGG | 0.566559 | 8.2:-74261474 | MS.gene000569:CDS |
CTCAAGGGATGTTATACTTG+TGG | 0.567441 | 8.2:+74261723 | None:intergenic |
AACAATGGAAACAATAAGGA+TGG | 0.567730 | 8.2:-74261478 | MS.gene000569:CDS |
AATGGAAGTAACAGTAACAA+TGG | 0.568724 | 8.2:-74261493 | MS.gene000569:CDS |
GCAAAAGTTATAGTCCCTGA+TGG | 0.570125 | 8.2:+74261268 | None:intergenic |
TGCAGGGGAAGTATTTGGAG+AGG | 0.571772 | 8.2:-74260459 | MS.gene000569:CDS |
GACCATGCGCTGCAAGCCGG+TGG | 0.571829 | 8.2:+74261335 | None:intergenic |
GTTAGAACTATTAGGCTCAA+GGG | 0.573060 | 8.2:+74261708 | None:intergenic |
GTAAGGCGAACAAGAGGAGG+AGG | 0.573398 | 8.2:+74261028 | None:intergenic |
GAACTGAGCACAGACAATAA+GGG | 0.574095 | 8.2:+74260805 | None:intergenic |
AAAGGTGCAGCTAAGGCCAA+TGG | 0.579176 | 8.2:-74261511 | MS.gene000569:CDS |
CATGAGCTAGCCTCAACTAC+CGG | 0.582321 | 8.2:-74261367 | MS.gene000569:CDS |
GAGGCCTTGAGTCGTCGACC+TGG | 0.583981 | 8.2:-74261055 | MS.gene000569:CDS |
AGTTCTACGAGGTTAGCCCT+TGG | 0.589690 | 8.2:-74261207 | MS.gene000569:CDS |
ACCCTTCACATCCTTGACAT+TGG | 0.592655 | 8.2:-74261112 | MS.gene000569:CDS |
CACCGGATTCTCACGAAGAG+TGG | 0.596680 | 8.2:-74260645 | MS.gene000569:CDS |
ACAGTAAGGCGAACAAGAGG+AGG | 0.598078 | 8.2:+74261025 | None:intergenic |
AGAAGAAAATAGTACAAGTG+TGG | 0.598352 | 8.2:-74260375 | MS.gene000569:CDS |
GAGTTTCTGAAGGTGTTGAG+AGG | 0.604609 | 8.2:-74260740 | MS.gene000569:CDS |
TTGGATGATCCATATAACAA+TGG | 0.604773 | 8.2:-74261871 | MS.gene000569:CDS |
GAGTGTTGTTGCAGTAGTTG+TGG | 0.605351 | 8.2:-74260677 | MS.gene000569:CDS |
AAAACCGTGACAGTGATGAA+AGG | 0.606029 | 8.2:-74260580 | MS.gene000569:CDS |
AGACAATAAGGGTTTCATCA+GGG | 0.608691 | 8.2:+74260816 | None:intergenic |
AGATGCAGCTCTTGAAGGGA+CGG | 0.612821 | 8.2:-74261560 | MS.gene000569:CDS |
AAACAATAAGGATGGTAGGT+GGG | 0.614807 | 8.2:-74261470 | MS.gene000569:CDS |
GCCTTGAGTCGTCGACCTGG+TGG | 0.619448 | 8.2:-74261052 | MS.gene000569:CDS |
ACATGGACCTACTGAAAATG+GGG | 0.620682 | 8.2:+74260958 | None:intergenic |
GTACAAGTGTGGAACTATGG+TGG | 0.621371 | 8.2:-74260364 | MS.gene000569:CDS |
ACCAGCGTGAAATGAACGAA+AGG | 0.622182 | 8.2:-74260520 | MS.gene000569:CDS |
CTTCGTCATCTACCCCATCA+GGG | 0.622872 | 8.2:-74261282 | MS.gene000569:CDS |
AAGAACAGAAAGAAACAGGT+TGG | 0.623585 | 8.2:+74260336 | None:intergenic |
GTGAAAGAATGAAAGAAGCA+GGG | 0.627954 | 8.2:-74260484 | MS.gene000569:CDS |
TCCAATGTCAAGGATGTGAA+GGG | 0.631798 | 8.2:+74261111 | None:intergenic |
CACTCTTCGTGAGAATCCGG+TGG | 0.634201 | 8.2:+74260646 | None:intergenic |
GAAACAATAAGGATGGTAGG+TGG | 0.634500 | 8.2:-74261471 | MS.gene000569:CDS |
GGAGAGGATGCAATTGATGG+AGG | 0.634715 | 8.2:-74260443 | MS.gene000569:CDS |
GAGTCTCTCATGGTGTGCAA+TGG | 0.634794 | 8.2:-74261090 | MS.gene000569:CDS |
CATGAGAGACTCCAATGTCA+AGG | 0.642013 | 8.2:+74261101 | None:intergenic |
GAGAGGCATGGAGCCTAAAG+GGG | 0.644363 | 8.2:-74260723 | MS.gene000569:CDS |
TTACTAGGAAAGGAAAACCA+AGG | 0.646391 | 8.2:+74261190 | None:intergenic |
TACTAGGAAAGGAAAACCAA+GGG | 0.646959 | 8.2:+74261191 | None:intergenic |
ACGACAGTAAGGCGAACAAG+AGG | 0.653539 | 8.2:+74261022 | None:intergenic |
AAGGAGAATGATGGAAGGTG+AGG | 0.653865 | 8.2:-74260561 | MS.gene000569:CDS |
TTAAGGATTGAGCATAACCA+AGG | 0.659329 | 8.2:+74260912 | None:intergenic |
AATATTAAGTGAGAACAACA+TGG | 0.666720 | 8.2:-74260699 | MS.gene000569:CDS |
TGAAAGAAGTGAGTTTCTGA+AGG | 0.676073 | 8.2:-74260750 | MS.gene000569:CDS |
TGCAGCTCTTGAAGGGACGG+TGG | 0.681085 | 8.2:-74261557 | MS.gene000569:CDS |
TGTGCTGTAGCCATAACCGG+TGG | 0.681250 | 8.2:-74261427 | MS.gene000569:CDS |
GATGAAAGGAGAATGATGGA+AGG | 0.683629 | 8.2:-74260566 | MS.gene000569:CDS |
GAAAGAAGCAGGGTTTGCAG+GGG | 0.689170 | 8.2:-74260474 | MS.gene000569:CDS |
AAAAGTTATAGTCCCTGATG+GGG | 0.695486 | 8.2:+74261270 | None:intergenic |
ACGGTGGTTAGAAAATCTGG+TGG | 0.698436 | 8.2:-74261541 | MS.gene000569:CDS |
GAAGAGTGGAGTACTTATGG+AGG | 0.701033 | 8.2:-74260631 | MS.gene000569:CDS |
CGGTGGTTAGAAAATCTGGT+GGG | 0.703407 | 8.2:-74261540 | MS.gene000569:CDS |
CGGTTATGGCTACAGCACAA+GGG | 0.712194 | 8.2:+74261431 | None:intergenic |
GAAGAGAAAGTATCACCACA+TGG | 0.723139 | 8.2:+74260941 | None:intergenic |
ATCATTACTGAAGTTCTACG+AGG | 0.730047 | 8.2:-74261218 | MS.gene000569:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AATATTAAGTGAGAACAACA+TGG | - | chr8.2:74261557-74261576 | MS.gene000569:CDS | 25.0% |
! | CATTGAAAATGACCAAAATA+TGG | - | chr8.2:74261272-74261291 | MS.gene000569:CDS | 25.0% |
!! | AAGGAAGTATGATAACAATT+GGG | - | chr8.2:74261848-74261867 | MS.gene000569:CDS | 25.0% |
!! | AGAACTTCAGTAATGATTTT+TGG | + | chr8.2:74261035-74261054 | None:intergenic | 25.0% |
!! | TAAGGAAGTATGATAACAAT+TGG | - | chr8.2:74261847-74261866 | MS.gene000569:CDS | 25.0% |
!! | TTTGAGACTTAATTCATCTT+CGG | + | chr8.2:74260611-74260630 | None:intergenic | 25.0% |
!!! | AATTAGTATTGGCATCAATT+TGG | + | chr8.2:74260465-74260484 | None:intergenic | 25.0% |
!!! | CATATTTTGGTCATTTTCAA+TGG | + | chr8.2:74261274-74261293 | None:intergenic | 25.0% |
AACAATGGAAACAATAAGGA+TGG | - | chr8.2:74260778-74260797 | MS.gene000569:CDS | 30.0% | |
AATGGAAGTAACAGTAACAA+TGG | - | chr8.2:74260763-74260782 | MS.gene000569:CDS | 30.0% | |
AGAAGAAAATAGTACAAGTG+TGG | - | chr8.2:74261881-74261900 | MS.gene000569:CDS | 30.0% | |
ATGACGAAGATGAAGATAAA+TGG | + | chr8.2:74260963-74260982 | None:intergenic | 30.0% | |
CAGTAACAATGGAAACAATA+AGG | - | chr8.2:74260774-74260793 | MS.gene000569:CDS | 30.0% | |
CCATTATCACTTTCATTCAT+CGG | + | chr8.2:74260676-74260695 | None:intergenic | 30.0% | |
GGCATTAGAAGAATTAGTAT+TGG | + | chr8.2:74260476-74260495 | None:intergenic | 30.0% | |
GGTATGTTGTTAGAACTATT+AGG | + | chr8.2:74260559-74260578 | None:intergenic | 30.0% | |
TATCTGCAGATTGACATTTA+AGG | + | chr8.2:74261364-74261383 | None:intergenic | 30.0% | |
TCACTTAATATTACCCCTTT+AGG | + | chr8.2:74261549-74261568 | None:intergenic | 30.0% | |
TGGATGTAACCATTGTTATA+TGG | + | chr8.2:74260397-74260416 | None:intergenic | 30.0% | |
TTGGATGATCCATATAACAA+TGG | - | chr8.2:74260385-74260404 | MS.gene000569:CDS | 30.0% | |
! | ATTGTTACTGTTACTTCCAT+TGG | + | chr8.2:74260764-74260783 | None:intergenic | 30.0% |
! | TCTTAAGTCTCTTGTTCTTT+TGG | + | chr8.2:74260648-74260667 | None:intergenic | 30.0% |
!! | AATGATTTTTGGAAGAATCG+CGG | + | chr8.2:74261024-74261043 | None:intergenic | 30.0% |
!! | ATTTGCTATGTTACTAGGAA+AGG | + | chr8.2:74261079-74261098 | None:intergenic | 30.0% |
!! | GTTTTTAGATTCAACCAGTT+CGG | - | chr8.2:74261647-74261666 | MS.gene000569:CDS | 30.0% |
AAAAGTTATAGTCCCTGATG+GGG | + | chr8.2:74260989-74261008 | None:intergenic | 35.0% | |
AAACAATAAGGATGGTAGGT+GGG | - | chr8.2:74260786-74260805 | MS.gene000569:CDS | 35.0% | |
AAGAACAGAAAGAAACAGGT+TGG | + | chr8.2:74261923-74261942 | None:intergenic | 35.0% | |
AGAAACTCACTTCTTTCATC+AGG | + | chr8.2:74261504-74261523 | None:intergenic | 35.0% | |
AGACAATAAGGGTTTCATCA+GGG | + | chr8.2:74261443-74261462 | None:intergenic | 35.0% | |
ATAGTACAAGTGTGGAACTA+TGG | - | chr8.2:74261889-74261908 | MS.gene000569:CDS | 35.0% | |
ATCATTACTGAAGTTCTACG+AGG | - | chr8.2:74261038-74261057 | MS.gene000569:CDS | 35.0% | |
ATGGAAACAATAAGGATGGT+AGG | - | chr8.2:74260782-74260801 | MS.gene000569:CDS | 35.0% | |
ATGGATCATCCAAGAATGAT+GGG | + | chr8.2:74260378-74260397 | None:intergenic | 35.0% | |
CAAAAGTTATAGTCCCTGAT+GGG | + | chr8.2:74260990-74261009 | None:intergenic | 35.0% | |
CACAAAGAACAGAAAGAAAC+AGG | + | chr8.2:74261927-74261946 | None:intergenic | 35.0% | |
CCGATGAATGAAAGTGATAA+TGG | - | chr8.2:74260673-74260692 | MS.gene000569:CDS | 35.0% | |
GATTCCATATCTCATACTCT+TGG | + | chr8.2:74260417-74260436 | None:intergenic | 35.0% | |
GTGAAAGAATGAAAGAAGCA+GGG | - | chr8.2:74261772-74261791 | MS.gene000569:CDS | 35.0% | |
GTTAGAACTATTAGGCTCAA+GGG | + | chr8.2:74260551-74260570 | None:intergenic | 35.0% | |
TACTAGGAAAGGAAAACCAA+GGG | + | chr8.2:74261068-74261087 | None:intergenic | 35.0% | |
TATGGATCATCCAAGAATGA+TGG | + | chr8.2:74260379-74260398 | None:intergenic | 35.0% | |
TATTGGCATCAATTTGGTAC+TGG | + | chr8.2:74260459-74260478 | None:intergenic | 35.0% | |
TGAAAGAAGTGAGTTTCTGA+AGG | - | chr8.2:74261506-74261525 | MS.gene000569:CDS | 35.0% | |
TGAACGAAAGGAGAGAAAAA+TGG | - | chr8.2:74261748-74261767 | MS.gene000569:CDS | 35.0% | |
TGTGAAAGAATGAAAGAAGC+AGG | - | chr8.2:74261771-74261790 | MS.gene000569:CDS | 35.0% | |
TGTTAGAACTATTAGGCTCA+AGG | + | chr8.2:74260552-74260571 | None:intergenic | 35.0% | |
TTAAGGATTGAGCATAACCA+AGG | + | chr8.2:74261347-74261366 | None:intergenic | 35.0% | |
TTACTAGGAAAGGAAAACCA+AGG | + | chr8.2:74261069-74261088 | None:intergenic | 35.0% | |
TTAGCATTCAATGTCTGCAA+TGG | + | chr8.2:74261405-74261424 | None:intergenic | 35.0% | |
TTCAGCTAGAACTTGAAGAA+TGG | + | chr8.2:74261106-74261125 | None:intergenic | 35.0% | |
TTCTTCGGCAAATCTGAAAA+GGG | + | chr8.2:74260580-74260599 | None:intergenic | 35.0% | |
TTTCTGTTCTTTGTGGAAAC+TGG | - | chr8.2:74261932-74261951 | MS.gene000569:CDS | 35.0% | |
TTTCTTCGGCAAATCTGAAA+AGG | + | chr8.2:74260581-74260600 | None:intergenic | 35.0% | |
! | AAAATGGGGTCTCCATATTT+TGG | + | chr8.2:74261287-74261306 | None:intergenic | 35.0% |
! | ACATCCAAGAGTATGAGATA+TGG | - | chr8.2:74260410-74260429 | MS.gene000569:CDS | 35.0% |
! | CTGTTTCTTTCTGTTCTTTG+TGG | - | chr8.2:74261925-74261944 | MS.gene000569:CDS | 35.0% |
!! | AATGTTAGTTGTGCTGTTTG+TGG | + | chr8.2:74260497-74260516 | None:intergenic | 35.0% |
!! | GAAGCATTTGCTATGTTACT+AGG | + | chr8.2:74261084-74261103 | None:intergenic | 35.0% |
!! | GGTACTGGTTACTTATATCT+TGG | + | chr8.2:74260444-74260463 | None:intergenic | 35.0% |
!! | GTCATTTTCAATGGATGAAG+AGG | + | chr8.2:74261265-74261284 | None:intergenic | 35.0% |
!! | TCAAGAATGTGATCTGGTTT+TGG | + | chr8.2:74260328-74260347 | None:intergenic | 35.0% |
!!! | ATGTGATCTGGTTTTGGATT+TGG | + | chr8.2:74260322-74260341 | None:intergenic | 35.0% |
!!! | CTCTTGTTCTTTTGGTTTTG+TGG | + | chr8.2:74260640-74260659 | None:intergenic | 35.0% |
AAAACCGTGACAGTGATGAA+AGG | - | chr8.2:74261676-74261695 | MS.gene000569:CDS | 40.0% | |
AAATCTGGTGGGAACAAGAA+AGG | - | chr8.2:74260727-74260746 | MS.gene000569:CDS | 40.0% | |
AACCAGATCACATTCTTGAC+TGG | - | chr8.2:74260329-74260348 | MS.gene000569:CDS | 40.0% | |
ACATGGACCTACTGAAAATG+GGG | + | chr8.2:74261301-74261320 | None:intergenic | 40.0% | |
CACATGGACCTACTGAAAAT+GGG | + | chr8.2:74261302-74261321 | None:intergenic | 40.0% | |
CAGACAATAAGGGTTTCATC+AGG | + | chr8.2:74261444-74261463 | None:intergenic | 40.0% | |
CAGTGATGAAAGGAGAATGA+TGG | - | chr8.2:74261686-74261705 | MS.gene000569:CDS | 40.0% | |
CTCAAGGGATGTTATACTTG+TGG | + | chr8.2:74260536-74260555 | None:intergenic | 40.0% | |
CTCTTTCTTCCCATCATTCT+TGG | - | chr8.2:74260366-74260385 | MS.gene000569:CDS | 40.0% | |
GAAACAATAAGGATGGTAGG+TGG | - | chr8.2:74260785-74260804 | MS.gene000569:CDS | 40.0% | |
GAACTGAGCACAGACAATAA+GGG | + | chr8.2:74261454-74261473 | None:intergenic | 40.0% | |
GACAATAAGGGTTTCATCAG+GGG | + | chr8.2:74261442-74261461 | None:intergenic | 40.0% | |
GCAAAAGTTATAGTCCCTGA+TGG | + | chr8.2:74260991-74261010 | None:intergenic | 40.0% | |
TCCAATGTCAAGGATGTGAA+GGG | + | chr8.2:74261148-74261167 | None:intergenic | 40.0% | |
TCTTCGGCATTTCGTTTCTT+CGG | + | chr8.2:74260595-74260614 | None:intergenic | 40.0% | |
TGAACTGAGCACAGACAATA+AGG | + | chr8.2:74261455-74261474 | None:intergenic | 40.0% | |
TGTGGTGATACTTTCTCTTC+TGG | - | chr8.2:74261318-74261337 | MS.gene000569:CDS | 40.0% | |
TTATTGTCTGTGCTCAGTTC+AGG | - | chr8.2:74261454-74261473 | MS.gene000569:CDS | 40.0% | |
TTCTCCTTTCATCACTGTCA+CGG | + | chr8.2:74261683-74261702 | None:intergenic | 40.0% | |
TTTGGAGAGGATGCAATTGA+TGG | - | chr8.2:74261810-74261829 | MS.gene000569:CDS | 40.0% | |
! | ATTCAGATTTCCACCGGTTA+TGG | + | chr8.2:74260842-74260861 | None:intergenic | 40.0% |
! | CTCAAGGCCTCTAAAAAAGT+TGG | + | chr8.2:74261192-74261211 | None:intergenic | 40.0% |
! | GATGAAAGGAGAATGATGGA+AGG | - | chr8.2:74261690-74261709 | MS.gene000569:CDS | 40.0% |
!! | AAGAGGCATTAACGACAGTA+AGG | + | chr8.2:74261248-74261267 | None:intergenic | 40.0% |
!! | GAAGAGAAAGTATCACCACA+TGG | + | chr8.2:74261318-74261337 | None:intergenic | 40.0% |
!!! | GCAATGGCCAACTTTTTTAG+AGG | - | chr8.2:74261182-74261201 | MS.gene000569:CDS | 40.0% |
!!! | TGGTTTTGGATTTGGTTCCA+TGG | + | chr8.2:74260314-74260333 | None:intergenic | 40.0% |
AATGGAGATGCAGCTCTTGA+AGG | - | chr8.2:74260691-74260710 | MS.gene000569:CDS | 45.0% | |
ACCAGCGTGAAATGAACGAA+AGG | - | chr8.2:74261736-74261755 | MS.gene000569:CDS | 45.0% | |
ACCCTTCACATCCTTGACAT+TGG | - | chr8.2:74261144-74261163 | MS.gene000569:CDS | 45.0% | |
ACGGTGGTTAGAAAATCTGG+TGG | - | chr8.2:74260715-74260734 | MS.gene000569:CDS | 45.0% | |
ACTTTCTCTTCTGGACTCCT+TGG | - | chr8.2:74261327-74261346 | MS.gene000569:CDS | 45.0% | |
AGCCAGTCAAGAATGTGATC+TGG | + | chr8.2:74260334-74260353 | None:intergenic | 45.0% | |
ATGAAAGAAGCAGGGTTTGC+AGG | - | chr8.2:74261780-74261799 | MS.gene000569:CDS | 45.0% | |
ATGGAGATGCAGCTCTTGAA+GGG | - | chr8.2:74260692-74260711 | MS.gene000569:CDS | 45.0% | |
CACACGATTCAGATTTCCAC+CGG | + | chr8.2:74260848-74260867 | None:intergenic | 45.0% | |
CATGAGAGACTCCAATGTCA+AGG | + | chr8.2:74261158-74261177 | None:intergenic | 45.0% | |
CCACATGGACCTACTGAAAA+TGG | + | chr8.2:74261303-74261322 | None:intergenic | 45.0% | |
CGGTGGTTAGAAAATCTGGT+GGG | - | chr8.2:74260716-74260735 | MS.gene000569:CDS | 45.0% | |
CTCCAATGTCAAGGATGTGA+AGG | + | chr8.2:74261149-74261168 | None:intergenic | 45.0% | |
CTTGACATTGGAGTCTCTCA+TGG | - | chr8.2:74261156-74261175 | MS.gene000569:CDS | 45.0% | |
GTACAAGTGTGGAACTATGG+TGG | - | chr8.2:74261892-74261911 | MS.gene000569:CDS | 45.0% | |
TCCTTTCGTTCATTTCACGC+TGG | + | chr8.2:74261740-74261759 | None:intergenic | 45.0% | |
TGAAAGAAGCAGGGTTTGCA+GGG | - | chr8.2:74261781-74261800 | MS.gene000569:CDS | 45.0% | |
! | AAGGAGAATGATGGAAGGTG+AGG | - | chr8.2:74261695-74261714 | MS.gene000569:CDS | 45.0% |
! | ACGGTTTTTGAATGCCGAAC+TGG | + | chr8.2:74261664-74261683 | None:intergenic | 45.0% |
! | ATGGAGACCCCATTTTCAGT+AGG | - | chr8.2:74261291-74261310 | MS.gene000569:CDS | 45.0% |
! | CACGAAGAGTGGAGTACTTA+TGG | - | chr8.2:74261622-74261641 | MS.gene000569:CDS | 45.0% |
! | CCATTTTCAGTAGGTCCATG+TGG | - | chr8.2:74261300-74261319 | MS.gene000569:CDS | 45.0% |
! | GAACAAGAAAGGTGCAGCTA+AGG | - | chr8.2:74260738-74260757 | MS.gene000569:CDS | 45.0% |
! | GAAGAGTGGAGTACTTATGG+AGG | - | chr8.2:74261625-74261644 | MS.gene000569:CDS | 45.0% |
! | GAGTGTTGTTGCAGTAGTTG+TGG | - | chr8.2:74261579-74261598 | MS.gene000569:CDS | 45.0% |
! | TGAAGGGTGCGCAAATTGTT+CGG | + | chr8.2:74261132-74261151 | None:intergenic | 45.0% |
!! | ATGGAGGTCGAGCTTTGTTA+AGG | - | chr8.2:74261829-74261848 | MS.gene000569:CDS | 45.0% |
!! | CACATTCTTGACTGGCTTGA+AGG | - | chr8.2:74260337-74260356 | MS.gene000569:CDS | 45.0% |
!! | GAGTTTCTGAAGGTGTTGAG+AGG | - | chr8.2:74261516-74261535 | MS.gene000569:CDS | 45.0% |
ACAGTAAGGCGAACAAGAGG+AGG | + | chr8.2:74261234-74261253 | None:intergenic | 50.0% | |
ACGACAGTAAGGCGAACAAG+AGG | + | chr8.2:74261237-74261256 | None:intergenic | 50.0% | |
AGATGCAGCTCTTGAAGGGA+CGG | - | chr8.2:74260696-74260715 | MS.gene000569:CDS | 50.0% | |
CCTTGTGCTGTAGCCATAAC+CGG | - | chr8.2:74260826-74260845 | MS.gene000569:CDS | 50.0% | |
CGGTTATGGCTACAGCACAA+GGG | + | chr8.2:74260828-74260847 | None:intergenic | 50.0% | |
CTCCACTCTTCGTGAGAATC+CGG | + | chr8.2:74261616-74261635 | None:intergenic | 50.0% | |
CTTCGTCATCTACCCCATCA+GGG | - | chr8.2:74260974-74260993 | MS.gene000569:CDS | 50.0% | |
GAAAGAAGCAGGGTTTGCAG+GGG | - | chr8.2:74261782-74261801 | MS.gene000569:CDS | 50.0% | |
GAGTCTCTCATGGTGTGCAA+TGG | - | chr8.2:74261166-74261185 | MS.gene000569:CDS | 50.0% | |
GGAGAGGATGCAATTGATGG+AGG | - | chr8.2:74261813-74261832 | MS.gene000569:CDS | 50.0% | |
GGGACGGTGGTTAGAAAATC+TGG | - | chr8.2:74260712-74260731 | MS.gene000569:CDS | 50.0% | |
TCTTCGTCATCTACCCCATC+AGG | - | chr8.2:74260973-74260992 | MS.gene000569:CDS | 50.0% | |
! | AAAGGTGCAGCTAAGGCCAA+TGG | - | chr8.2:74260745-74260764 | MS.gene000569:CDS | 50.0% |
! | AGTTCTACGAGGTTAGCCCT+TGG | - | chr8.2:74261049-74261068 | MS.gene000569:CDS | 50.0% |
! | AGTTGTGGCGATTTTGCCAC+CGG | - | chr8.2:74261594-74261613 | MS.gene000569:CDS | 50.0% |
! | CATGAGCTAGCCTCAACTAC+CGG | - | chr8.2:74260889-74260908 | MS.gene000569:CDS | 50.0% |
! | TGAGAGGCATGGAGCCTAAA+GGG | - | chr8.2:74261532-74261551 | MS.gene000569:CDS | 50.0% |
! | TTGAGAGGCATGGAGCCTAA+AGG | - | chr8.2:74261531-74261550 | MS.gene000569:CDS | 50.0% |
!! | GGGTTTGCAGGGGAAGTATT+TGG | - | chr8.2:74261792-74261811 | MS.gene000569:CDS | 50.0% |
!! | TCTGAAGGTGTTGAGAGGCA+TGG | - | chr8.2:74261521-74261540 | MS.gene000569:CDS | 50.0% |
!! | TGCAGGGGAAGTATTTGGAG+AGG | - | chr8.2:74261797-74261816 | MS.gene000569:CDS | 50.0% |
CACCGGATTCTCACGAAGAG+TGG | - | chr8.2:74261611-74261630 | MS.gene000569:CDS | 55.0% | |
CACTCTTCGTGAGAATCCGG+TGG | + | chr8.2:74261613-74261632 | None:intergenic | 55.0% | |
CCGGTTATGGCTACAGCACA+AGG | + | chr8.2:74260829-74260848 | None:intergenic | 55.0% | |
GTAAGGCGAACAAGAGGAGG+AGG | + | chr8.2:74261231-74261250 | None:intergenic | 55.0% | |
TGTGCTGTAGCCATAACCGG+TGG | - | chr8.2:74260829-74260848 | MS.gene000569:CDS | 55.0% | |
! | GAGAGGCATGGAGCCTAAAG+GGG | - | chr8.2:74261533-74261552 | MS.gene000569:CDS | 55.0% |
ACAAGAGGAGGAGGTCCACC+AGG | + | chr8.2:74261222-74261241 | None:intergenic | 60.0% | |
GAAGACCATGCGCTGCAAGC+CGG | + | chr8.2:74260927-74260946 | None:intergenic | 60.0% | |
GTTGGCATCGCCGGTAGTTG+AGG | + | chr8.2:74260902-74260921 | None:intergenic | 60.0% | |
TCCACCAGGTCGACGACTCA+AGG | + | chr8.2:74261208-74261227 | None:intergenic | 60.0% | |
TGCAGCTCTTGAAGGGACGG+TGG | - | chr8.2:74260699-74260718 | MS.gene000569:CDS | 60.0% | |
AAGCCGGTGGTTGGCATCGC+CGG | + | chr8.2:74260911-74260930 | None:intergenic | 65.0% | |
ATGCGCTGCAAGCCGGTGGT+TGG | + | chr8.2:74260920-74260939 | None:intergenic | 65.0% | |
CTACCGGCGATGCCAACCAC+CGG | - | chr8.2:74260905-74260924 | MS.gene000569:CDS | 65.0% | |
GAGGCCTTGAGTCGTCGACC+TGG | - | chr8.2:74261201-74261220 | MS.gene000569:CDS | 65.0% | |
GCCTTGAGTCGTCGACCTGG+TGG | - | chr8.2:74261204-74261223 | MS.gene000569:CDS | 65.0% | |
!! | AACCACCGGCTTGCAGCGCA+TGG | - | chr8.2:74260919-74260938 | MS.gene000569:CDS | 65.0% |
GACCATGCGCTGCAAGCCGG+TGG | + | chr8.2:74260924-74260943 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 74260307 | 74261971 | 74260307 | ID=MS.gene000569 |
chr8.2 | mRNA | 74260307 | 74261971 | 74260307 | ID=MS.gene000569.t1;Parent=MS.gene000569 |
chr8.2 | exon | 74260307 | 74261971 | 74260307 | ID=MS.gene000569.t1.exon1;Parent=MS.gene000569.t1 |
chr8.2 | CDS | 74260307 | 74261971 | 74260307 | ID=cds.MS.gene000569.t1;Parent=MS.gene000569.t1 |
Gene Sequence |
Protein sequence |