AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000620.t1 MTR_4g007060 96.845 317 7 1 1 314 1 317 0.0 629
MS.gene000620.t1 MTR_4g007060 94.643 280 12 1 38 314 4 283 0.0 537
MS.gene000620.t1 MTR_4g007060 92.958 213 15 0 1 213 1 213 5.75e-116 334
MS.gene000620.t1 MTR_2g105060 57.716 324 112 9 4 314 5 316 3.62e-109 320
MS.gene000620.t1 MTR_2g105060 58.498 253 87 6 68 314 1 241 1.80e-86 259
MS.gene000620.t1 MTR_3g106060 46.984 315 123 13 7 311 6 286 2.70e-72 225
MS.gene000620.t1 MTR_1g013760 44.964 278 123 7 43 311 20 276 8.13e-63 201
MS.gene000620.t1 MTR_4g007060 95.726 117 5 0 44 160 10 126 2.93e-44 149
MS.gene000620.t1 MTR_1g013790 36.803 269 123 6 45 307 6 233 1.59e-42 147
MS.gene000620.t1 MTR_7g110720 31.046 306 155 9 51 307 100 398 5.17e-37 137
MS.gene000620.t1 MTR_7g110720 30.952 294 144 8 51 307 100 371 4.05e-35 131
MS.gene000620.t1 MTR_2g023930 34.649 228 102 5 43 223 139 366 9.10e-35 133
MS.gene000620.t1 MTR_4g132430 29.365 252 138 5 6 223 77 322 2.90e-31 122
MS.gene000620.t1 MTR_3g053330 33.333 210 91 5 145 307 234 441 7.01e-30 118
MS.gene000620.t1 MTR_4g132430 48.276 87 45 0 137 223 102 188 3.09e-27 109
MS.gene000620.t1 MTR_2g088000 25.000 380 162 7 51 307 173 552 3.25e-27 112
MS.gene000620.t1 MTR_4g094412 54.762 84 31 2 140 222 217 294 2.01e-26 108
MS.gene000620.t1 MTR_4g094412 54.762 84 31 2 140 222 226 303 2.25e-26 108
MS.gene000620.t1 MTR_4g107970 57.500 80 32 2 143 222 161 238 1.68e-25 106
MS.gene000620.t1 MTR_7g009730 56.098 82 34 2 139 220 198 277 1.94e-25 106
MS.gene000620.t1 MTR_4g107970 57.500 80 32 2 143 222 238 315 2.55e-25 106
MS.gene000620.t1 MTR_4g049760 50.000 84 42 0 139 222 267 350 2.85e-25 106
MS.gene000620.t1 MTR_2g045360 41.284 109 64 0 137 245 186 294 8.54e-25 103
MS.gene000620.t1 MTR_4g049790 33.136 169 70 4 121 265 290 439 1.25e-21 95.5
MS.gene000620.t1 MTR_5g016610 43.200 125 58 4 95 219 145 256 1.48e-21 92.4
MS.gene000620.t1 MTR_2g033820 58.065 62 25 1 161 222 202 262 5.73e-20 89.7
MS.gene000620.t1 MTR_4g094908 60.000 60 24 0 160 219 264 323 1.18e-19 88.2
MS.gene000620.t1 MTR_7g079010 42.241 116 56 4 112 220 87 198 1.31e-19 85.9
MS.gene000620.t1 MTR_1g086790 56.452 62 26 1 161 222 157 217 2.04e-19 87.4
MS.gene000620.t1 MTR_5g094430 57.143 63 26 1 160 222 228 289 4.83e-19 87.4
MS.gene000620.t1 MTR_5g094430 50.000 60 28 2 163 222 67 124 1.96e-12 67.8
MS.gene000620.t1 MTR_5g094430 57.143 63 26 1 160 222 250 311 5.87e-19 87.0
MS.gene000620.t1 MTR_5g094430 47.143 70 34 3 163 231 89 156 2.07e-12 67.8
MS.gene000620.t1 MTR_5g094430 57.143 63 26 1 160 222 362 423 6.28e-19 87.4
MS.gene000620.t1 MTR_5g094430 50.000 60 28 2 163 222 201 258 2.24e-12 67.8
MS.gene000620.t1 MTR_7g109800 39.655 116 59 4 133 248 126 230 7.56e-19 85.5
MS.gene000620.t1 MTR_3g031220 40.157 127 60 5 120 238 315 433 8.19e-19 87.0
MS.gene000620.t1 MTR_3g031220 53.333 60 26 2 163 222 199 256 1.61e-15 77.4
MS.gene000620.t1 MTR_3g056100 57.143 63 26 1 160 222 256 317 1.24e-18 86.3
MS.gene000620.t1 MTR_3g056100 50.000 60 28 2 163 222 100 157 2.99e-12 67.4
MS.gene000620.t1 MTR_5g074400 52.055 73 30 2 160 232 418 485 1.27e-18 86.7
MS.gene000620.t1 MTR_5g074400 53.333 60 26 2 163 222 244 301 1.66e-15 77.4
MS.gene000620.t1 MTR_3g056100 57.143 63 26 1 160 222 400 461 1.28e-18 86.7
MS.gene000620.t1 MTR_3g056100 50.000 60 28 2 163 222 244 301 3.40e-12 67.4
MS.gene000620.t1 MTR_3g056100 57.143 63 26 1 160 222 413 474 1.41e-18 86.7
MS.gene000620.t1 MTR_3g056100 50.000 60 28 2 163 222 244 301 3.54e-12 67.4
MS.gene000620.t1 MTR_3g056100 57.143 63 26 1 160 222 269 330 1.49e-18 86.3
MS.gene000620.t1 MTR_3g056100 50.000 60 28 2 163 222 100 157 3.24e-12 67.0
MS.gene000620.t1 MTR_1g009613 52.778 72 32 1 150 219 248 319 1.59e-18 85.1
MS.gene000620.t1 MTR_3g104750 54.098 61 27 1 160 220 102 161 1.71e-18 81.6
MS.gene000620.t1 MTR_1g015140 52.459 61 28 1 160 220 100 159 3.16e-18 80.9
MS.gene000620.t1 MTR_4g094588 51.613 62 29 1 161 222 177 237 3.26e-18 84.3
MS.gene000620.t1 MTR_5g097490 51.948 77 34 3 146 222 238 311 3.34e-18 84.7
MS.gene000620.t1 MTR_5g097490 44.444 63 33 2 160 222 90 150 3.19e-11 63.9
MS.gene000620.t1 MTR_4g127040 43.299 97 51 2 125 221 212 304 3.97e-18 83.6
MS.gene000620.t1 MTR_2g032030 49.367 79 39 1 157 234 261 339 4.05e-18 84.7
MS.gene000620.t1 MTR_2g032030 49.367 79 39 1 157 234 261 339 4.28e-18 84.7
MS.gene000620.t1 MTR_7g100510 52.381 63 29 1 160 222 359 420 9.36e-18 83.6
MS.gene000620.t1 MTR_7g100510 50.725 69 32 2 163 231 190 256 1.27e-16 80.5
MS.gene000620.t1 MTR_7g071120 40.625 96 52 3 160 255 322 412 1.22e-17 83.6
MS.gene000620.t1 MTR_7g071120 50.820 61 28 2 162 222 166 224 6.05e-14 72.4
MS.gene000620.t1 MTR_1g070455 53.125 64 30 0 160 223 291 354 1.30e-17 82.8
MS.gene000620.t1 MTR_5g042920 52.381 63 29 1 160 222 318 379 1.95e-17 82.8
MS.gene000620.t1 MTR_5g042920 53.333 60 26 2 163 222 152 209 6.85e-14 72.0
MS.gene000620.t1 MTR_7g028415 52.459 61 28 1 160 220 91 150 4.04e-17 77.8
MS.gene000620.t1 MTR_7g028710 52.459 61 28 1 160 220 91 150 4.04e-17 77.8
MS.gene000620.t1 MTR_7g109600 47.761 67 35 0 163 229 54 120 6.19e-17 79.3
MS.gene000620.t1 MTR_3g009470 53.968 63 28 1 160 222 493 554 6.69e-17 81.6
MS.gene000620.t1 MTR_3g009470 48.571 70 34 2 154 223 272 339 1.31e-14 74.7
MS.gene000620.t1 MTR_4g082580 52.381 63 29 1 160 222 276 337 7.61e-17 80.9
MS.gene000620.t1 MTR_4g082580 50.000 60 29 1 163 222 146 204 6.28e-12 66.2
MS.gene000620.t1 MTR_5g091390 49.231 65 32 1 161 225 156 219 1.01e-16 79.7
MS.gene000620.t1 MTR_4g130900 32.203 177 97 5 92 252 288 457 1.16e-16 80.5
MS.gene000620.t1 MTR_4g013260 52.381 63 29 1 160 222 334 395 1.24e-16 80.5
MS.gene000620.t1 MTR_4g013260 35.593 118 70 3 162 275 184 299 1.16e-15 77.8
MS.gene000620.t1 MTR_7g080000 39.806 103 56 3 125 222 390 491 1.55e-16 80.5
MS.gene000620.t1 MTR_7g080000 46.774 62 31 2 161 222 233 292 7.72e-11 63.2
MS.gene000620.t1 MTR_8g096730 47.541 61 31 1 160 220 68 127 1.81e-16 75.5
MS.gene000620.t1 MTR_7g011820 53.333 60 27 1 160 219 408 466 2.05e-16 80.1
MS.gene000620.t1 MTR_7g011820 51.613 62 26 3 163 222 229 288 9.13e-13 68.9
MS.gene000620.t1 MTR_8g028565 46.479 71 38 0 163 233 156 226 3.26e-16 78.6
MS.gene000620.t1 MTR_4g047580 32.673 101 64 1 139 235 258 358 3.99e-16 79.3
MS.gene000620.t1 MTR_8g098945 44.444 81 41 1 163 239 130 210 4.04e-16 77.4
MS.gene000620.t1 MTR_7g079040 33.333 120 78 1 160 277 152 271 7.75e-16 77.4
MS.gene000620.t1 MTR_7g080020 52.381 63 29 1 160 222 491 552 8.13e-16 78.6
MS.gene000620.t1 MTR_7g080020 49.180 61 29 2 162 222 280 338 1.66e-11 65.5
MS.gene000620.t1 MTR_3g031220 53.333 60 26 2 163 222 199 256 8.76e-16 77.4
MS.gene000620.t1 MTR_8g087000 50.000 60 30 0 163 222 78 137 9.05e-16 75.9
MS.gene000620.t1 MTR_8g087000 50.000 60 30 0 163 222 77 136 9.55e-16 75.9
MS.gene000620.t1 MTR_2g024350 35.556 135 75 4 162 288 8 138 1.37e-15 75.1
MS.gene000620.t1 MTR_1g077780 47.619 63 32 1 160 222 60 121 1.42e-15 73.2
MS.gene000620.t1 MTR_3g095040 50.794 63 30 1 160 222 116 177 1.95e-15 73.9
MS.gene000620.t1 MTR_4g122530 48.387 62 31 1 161 222 207 267 2.20e-15 76.6
MS.gene000620.t1 MTR_8g092010 50.794 63 30 1 160 222 106 167 2.35e-15 73.6
MS.gene000620.t1 MTR_5g043880 49.153 59 29 1 161 219 123 180 2.74e-15 75.1
MS.gene000620.t1 MTR_3g108960 46.269 67 36 0 160 226 312 378 2.83e-15 76.3
MS.gene000620.t1 MTR_2g024380 49.180 61 31 0 162 222 251 311 3.73e-15 76.3
MS.gene000620.t1 MTR_2g016770 45.902 61 33 0 163 223 36 96 4.74e-15 73.2
MS.gene000620.t1 MTR_2g016770 45.902 61 33 0 163 223 28 88 5.73e-15 72.8
MS.gene000620.t1 MTR_8g092140 43.836 73 39 2 147 219 146 216 6.16e-15 73.2
MS.gene000620.t1 MTR_8g007270 50.000 60 29 1 160 219 152 210 7.20e-15 72.8
MS.gene000620.t1 MTR_3g095080 48.333 60 30 1 160 219 166 224 9.40e-15 72.8
MS.gene000620.t1 MTR_3g009470 50.000 66 31 2 158 223 276 339 9.61e-15 75.1
MS.gene000620.t1 MTR_3g095080 48.333 60 30 1 160 219 142 200 1.00e-14 72.4
MS.gene000620.t1 MTR_1g099600 43.056 72 41 0 163 234 186 257 1.75e-14 73.2
MS.gene000620.t1 MTR_7g062220 50.820 61 29 1 163 223 125 184 2.52e-14 72.8
MS.gene000620.t1 MTR_0117s0040 46.667 60 32 0 160 219 72 131 5.27e-14 70.9
MS.gene000620.t1 MTR_2g083870 48.333 60 31 0 163 222 81 140 1.62e-13 69.7
MS.gene000620.t1 MTR_5g044695 42.593 54 31 0 137 190 52 105 4.06e-12 62.4
MS.gene000620.t1 MTR_5g097500 36.264 91 49 3 149 239 217 298 4.65e-12 65.9
MS.gene000620.t1 MTR_8g067650 46.032 63 34 0 160 222 337 399 1.39e-11 65.5
MS.gene000620.t1 MTR_8g067635 46.032 63 34 0 160 222 347 409 1.50e-11 65.5
MS.gene000620.t1 MTR_6g053200 42.424 66 38 0 157 222 325 390 3.35e-11 64.3
MS.gene000620.t1 MTR_8g069935 42.623 61 35 0 162 222 331 391 4.80e-11 63.5
MS.gene000620.t1 MTR_1g078260 43.662 71 36 3 150 219 237 304 6.75e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000620.t1 AT1G80840 51.724 319 120 7 4 314 6 298 3.08e-96 286
MS.gene000620.t1 AT4G31800 44.910 334 132 6 1 311 1 305 5.97e-80 245
MS.gene000620.t1 AT2G25000 41.748 309 131 7 12 314 4 269 7.21e-64 203
MS.gene000620.t1 AT4G31800 44.195 267 99 5 68 311 1 240 4.06e-62 197
MS.gene000620.t1 AT2G25000 43.657 268 104 6 51 314 2 226 7.34e-60 191
MS.gene000620.t1 AT2G25000 43.657 268 104 6 51 314 2 226 7.34e-60 191
MS.gene000620.t1 AT2G25000 43.820 267 103 6 51 313 24 247 3.52e-59 190
MS.gene000620.t1 AT4G31800 48.837 215 92 3 1 199 1 213 8.32e-57 184
MS.gene000620.t1 AT1G62300 30.686 277 126 7 50 260 159 435 2.09e-32 126
MS.gene000620.t1 AT4G01720 31.683 202 112 3 48 223 99 300 6.62e-28 113
MS.gene000620.t1 AT4G04450 37.342 158 73 4 129 260 165 322 2.90e-27 110
MS.gene000620.t1 AT4G04450 37.342 158 73 4 129 260 259 416 7.64e-27 110
MS.gene000620.t1 AT4G22070 51.220 82 40 0 142 223 277 358 8.03e-27 110
MS.gene000620.t1 AT4G22070 51.220 82 40 0 142 223 277 358 8.03e-27 110
MS.gene000620.t1 AT4G22070 51.220 82 40 0 142 223 277 358 8.03e-27 110
MS.gene000620.t1 AT4G22070 51.220 82 40 0 142 223 277 358 8.03e-27 110
MS.gene000620.t1 AT1G68150 53.571 84 32 2 140 222 218 295 2.41e-25 104
MS.gene000620.t1 AT1G18860 61.290 62 24 0 161 222 238 299 3.97e-24 102
MS.gene000620.t1 AT5G15130 52.564 78 37 0 145 222 168 245 4.55e-24 102
MS.gene000620.t1 AT5G15130 52.564 78 37 0 145 222 210 287 5.05e-24 102
MS.gene000620.t1 AT5G07100 36.806 144 83 5 79 222 65 200 1.75e-21 90.9
MS.gene000620.t1 AT5G07100 38.053 113 60 3 163 274 25 128 9.59e-16 75.1
MS.gene000620.t1 AT5G07100 36.806 144 83 5 79 222 65 200 1.75e-21 90.9
MS.gene000620.t1 AT5G07100 38.053 113 60 3 163 274 25 128 9.59e-16 75.1
MS.gene000620.t1 AT5G07100 36.806 144 83 5 79 222 65 200 1.75e-21 90.9
MS.gene000620.t1 AT5G07100 38.053 113 60 3 163 274 25 128 9.59e-16 75.1
MS.gene000620.t1 AT5G07100 36.806 144 83 5 79 222 65 200 1.75e-21 90.9
MS.gene000620.t1 AT5G07100 38.053 113 60 3 163 274 25 128 9.59e-16 75.1
MS.gene000620.t1 AT5G07100 36.806 144 83 5 79 222 158 293 3.17e-21 92.4
MS.gene000620.t1 AT5G07100 38.053 113 60 3 163 274 118 221 6.52e-15 74.3
MS.gene000620.t1 AT2G04880 50.617 81 31 2 160 240 281 352 4.94e-21 93.6
MS.gene000620.t1 AT2G04880 44.444 63 33 2 160 222 109 169 4.61e-13 69.7
MS.gene000620.t1 AT2G04880 50.617 81 31 2 160 240 305 376 5.17e-21 93.6
MS.gene000620.t1 AT2G04880 44.444 63 33 2 160 222 109 169 4.89e-13 69.7
MS.gene000620.t1 AT5G13080 43.269 104 56 2 117 220 24 124 7.02e-20 84.7
MS.gene000620.t1 AT4G31550 40.351 114 64 2 119 232 207 316 8.46e-20 88.6
MS.gene000620.t1 AT1G69810 27.273 264 123 7 26 222 3 264 1.12e-19 89.0
MS.gene000620.t1 AT2G30590 39.091 110 63 2 114 223 269 374 1.98e-19 88.2
MS.gene000620.t1 AT1G29860 44.828 87 38 2 161 238 135 220 2.35e-19 86.7
MS.gene000620.t1 AT4G31550 52.055 73 35 0 160 232 243 315 3.13e-19 87.0
MS.gene000620.t1 AT2G38470 45.652 92 45 2 160 251 360 446 4.19e-19 88.2
MS.gene000620.t1 AT2G38470 54.098 61 26 2 162 222 184 242 6.10e-16 78.6
MS.gene000620.t1 AT1G69810 44.828 87 45 2 137 222 122 206 4.86e-19 86.7
MS.gene000620.t1 AT2G23320 57.895 57 24 0 163 219 241 297 6.78e-19 85.9
MS.gene000620.t1 AT2G24570 41.748 103 56 2 119 221 204 302 1.05e-18 85.5
MS.gene000620.t1 AT1G55600 59.016 61 24 1 163 223 308 367 1.56e-18 86.3
MS.gene000620.t1 AT5G26170 53.333 60 27 1 160 219 111 169 2.46e-18 81.3
MS.gene000620.t1 AT5G56270 55.556 63 27 1 160 222 485 546 3.63e-18 85.5
MS.gene000620.t1 AT5G56270 30.481 187 109 4 43 223 161 332 1.74e-14 74.3
MS.gene000620.t1 AT5G49520 53.226 62 28 1 161 222 220 280 3.82e-18 84.7
MS.gene000620.t1 AT3G04670 41.584 101 55 2 119 219 223 319 4.05e-18 84.0
MS.gene000620.t1 AT4G18170 51.613 62 29 1 161 222 171 231 5.11e-18 83.6
MS.gene000620.t1 AT3G62340 50.685 73 35 1 159 231 115 186 5.29e-18 82.8
MS.gene000620.t1 AT4G26640 55.556 63 27 1 160 222 203 264 5.97e-18 84.0
MS.gene000620.t1 AT4G26640 41.250 80 45 2 152 231 25 102 1.36e-12 68.2
MS.gene000620.t1 AT4G26640 55.556 63 27 1 160 222 203 264 5.97e-18 84.0
MS.gene000620.t1 AT4G26640 41.250 80 45 2 152 231 25 102 1.36e-12 68.2
MS.gene000620.t1 AT4G26640 55.556 63 27 1 160 222 203 264 5.97e-18 84.0
MS.gene000620.t1 AT4G26640 41.250 80 45 2 152 231 25 102 1.36e-12 68.2
MS.gene000620.t1 AT4G26640 55.556 63 27 1 160 222 203 264 5.97e-18 84.0
MS.gene000620.t1 AT4G26640 41.250 80 45 2 152 231 25 102 1.36e-12 68.2
MS.gene000620.t1 AT4G24240 44.318 88 45 2 132 219 255 338 6.74e-18 83.6
MS.gene000620.t1 AT1G13960 53.968 63 28 1 160 222 254 315 6.80e-18 83.6
MS.gene000620.t1 AT1G13960 56.452 62 24 3 163 224 77 135 1.38e-15 77.0
MS.gene000620.t1 AT1G13960 55.000 60 26 1 160 219 407 465 7.67e-18 84.3
MS.gene000620.t1 AT1G13960 56.452 62 24 3 163 224 230 288 1.37e-15 77.4
MS.gene000620.t1 AT1G64000 39.796 98 54 3 132 229 88 180 8.06e-18 80.5
MS.gene000620.t1 AT5G28650 41.584 101 55 2 119 219 223 319 8.33e-18 82.8
MS.gene000620.t1 AT4G26640 56.667 60 25 1 160 219 339 397 8.47e-18 84.3
MS.gene000620.t1 AT4G26640 43.662 71 38 2 152 222 161 229 2.17e-12 67.8
MS.gene000620.t1 AT4G26640 55.556 63 27 1 160 222 379 440 8.69e-18 84.3
MS.gene000620.t1 AT4G26640 41.250 80 45 2 152 231 201 278 1.92e-12 68.2
MS.gene000620.t1 AT1G29280 51.667 60 29 0 163 222 75 134 8.86e-18 81.6
MS.gene000620.t1 AT4G26640 55.556 63 27 1 160 222 307 368 8.92e-18 84.0
MS.gene000620.t1 AT4G26640 41.250 80 45 2 152 231 129 206 1.95e-12 68.2
MS.gene000620.t1 AT5G41570 46.753 77 38 2 144 220 82 155 9.13e-18 80.1
MS.gene000620.t1 AT2G03340 53.968 63 28 1 160 222 413 474 1.10e-17 84.0
MS.gene000620.t1 AT2G03340 50.000 72 34 2 163 234 251 320 3.02e-15 76.6
MS.gene000620.t1 AT2G47260 54.839 62 27 1 161 222 173 233 2.09e-17 82.0
MS.gene000620.t1 AT5G46350 42.697 89 47 2 161 246 182 269 2.24e-17 81.6
MS.gene000620.t1 AT2G30250 43.750 96 45 4 133 222 295 387 3.36e-17 82.0
MS.gene000620.t1 AT2G30250 48.333 60 29 2 163 222 167 224 6.38e-12 66.2
MS.gene000620.t1 AT3G01080 52.381 63 29 1 160 222 342 403 4.95e-17 81.6
MS.gene000620.t1 AT3G01080 51.667 60 27 2 163 222 206 263 1.74e-12 68.2
MS.gene000620.t1 AT2G37260 45.977 87 44 3 136 222 60 143 4.98e-17 80.9
MS.gene000620.t1 AT2G37260 35.135 111 58 3 116 219 222 325 4.96e-15 75.1
MS.gene000620.t1 AT2G37260 45.977 87 44 3 136 222 58 141 4.99e-17 80.9
MS.gene000620.t1 AT2G37260 35.135 111 58 3 116 219 220 323 4.89e-15 75.1
MS.gene000620.t1 AT3G01080 52.381 63 29 1 160 222 304 365 5.18e-17 81.6
MS.gene000620.t1 AT3G01080 51.667 60 27 2 163 222 168 225 1.83e-12 67.8
MS.gene000620.t1 AT2G37260 45.977 87 44 3 136 222 140 223 6.46e-17 81.3
MS.gene000620.t1 AT2G37260 35.135 111 58 3 116 219 302 405 5.70e-15 75.5
MS.gene000620.t1 AT3G01970 53.333 60 27 1 160 219 63 121 8.55e-17 76.3
MS.gene000620.t1 AT1G69310 52.542 59 27 1 161 219 146 203 1.18e-16 79.0
MS.gene000620.t1 AT1G69310 52.542 59 27 1 161 219 146 203 1.18e-16 79.0
MS.gene000620.t1 AT1G69310 52.542 59 27 1 161 219 146 203 1.18e-16 79.0
MS.gene000620.t1 AT2G21900 49.254 67 33 1 156 222 103 168 1.58e-16 77.0
MS.gene000620.t1 AT4G30935 45.946 74 38 2 149 222 319 390 1.58e-16 80.1
MS.gene000620.t1 AT2G34830 34.586 133 77 2 107 230 161 292 1.73e-16 80.1
MS.gene000620.t1 AT2G34830 34.586 133 77 2 107 230 152 283 1.75e-16 80.1
MS.gene000620.t1 AT4G01250 45.070 71 39 0 163 233 129 199 4.35e-16 77.8
MS.gene000620.t1 AT1G30650 45.833 72 39 0 159 230 214 285 6.82e-16 78.2
MS.gene000620.t1 AT5G64810 37.000 100 60 2 120 219 70 166 1.14e-15 74.7
MS.gene000620.t1 AT5G52830 40.217 92 55 0 163 254 166 257 1.47e-15 76.6
MS.gene000620.t1 AT5G43290 41.176 85 48 2 135 219 88 170 1.62e-15 75.9
MS.gene000620.t1 AT2G44745 48.571 70 33 2 160 229 143 209 1.93e-15 74.3
MS.gene000620.t1 AT4G26440 52.381 63 29 1 160 222 370 431 2.60e-15 76.6
MS.gene000620.t1 AT4G26440 47.541 61 30 2 163 223 179 237 2.53e-12 67.8
MS.gene000620.t1 AT2G46130 50.820 61 29 1 160 220 28 87 3.98e-15 70.9
MS.gene000620.t1 AT3G58710 46.154 78 38 1 163 240 71 144 6.15e-15 73.9
MS.gene000620.t1 AT3G58710 46.154 78 38 1 163 240 72 145 6.22e-15 73.9
MS.gene000620.t1 AT4G39410 50.000 60 29 1 160 219 221 279 6.98e-15 74.3
MS.gene000620.t1 AT5G45050 30.405 148 89 3 83 230 976 1109 1.41e-14 75.1
MS.gene000620.t1 AT5G45050 30.405 148 89 3 83 230 1115 1248 1.46e-14 75.1
MS.gene000620.t1 AT5G45050 30.405 148 89 3 83 230 1087 1220 1.49e-14 75.1
MS.gene000620.t1 AT5G45260 35.833 120 70 3 121 238 1172 1286 7.77e-14 72.8
MS.gene000620.t1 AT4G23550 29.032 155 91 4 160 295 138 292 3.59e-13 69.3
MS.gene000620.t1 AT1G69310 50.847 59 24 2 161 219 146 199 9.60e-13 67.8
MS.gene000620.t1 AT3G01080 51.667 60 27 2 163 222 206 263 1.36e-12 67.8
MS.gene000620.t1 AT3G32090 46.753 77 34 2 180 249 76 152 3.19e-12 64.7
MS.gene000620.t1 AT4G12020 36.885 122 65 4 161 272 467 586 6.79e-12 67.0
MS.gene000620.t1 AT4G12020 36.885 122 65 4 161 272 467 586 7.04e-12 67.0
MS.gene000620.t1 AT4G12020 36.885 122 65 4 161 272 467 586 7.12e-12 67.0
MS.gene000620.t1 AT4G12020 36.885 122 65 4 161 272 467 586 7.12e-12 67.0
MS.gene000620.t1 AT4G12020 36.885 122 65 4 161 272 400 519 7.69e-12 66.6
MS.gene000620.t1 AT4G12020 36.885 122 65 4 161 272 467 586 7.72e-12 66.6
MS.gene000620.t1 AT4G12020 36.885 122 65 4 161 272 467 586 7.79e-12 66.6
MS.gene000620.t1 AT4G12020 36.885 122 65 4 161 272 467 586 7.89e-12 66.6
MS.gene000620.t1 AT4G12020 36.885 122 65 4 161 272 467 586 7.89e-12 66.6
MS.gene000620.t1 AT4G12020 36.885 122 65 4 161 272 467 586 8.03e-12 66.6
MS.gene000620.t1 AT4G12020 36.885 122 65 4 161 272 467 586 9.04e-12 66.6
MS.gene000620.t1 AT2G46130 49.180 61 26 2 160 220 28 83 3.30e-11 59.7

Find 62 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATAAGCTCTTGAAATTT+TGG 0.096984 4.3:+88398461 None:intergenic
ACAAGTGCTGCTCTAAAATT+TGG 0.202946 4.3:+88397421 None:intergenic
ACCTAAGGTACCAAAGAATT+TGG 0.225108 4.3:-88397476 MS.gene000620:CDS
TGCAGCCATTTCAGGAAAAT+TGG 0.259692 4.3:-88397398 MS.gene000620:CDS
GCACTTGTTGCAGCCATTTC+AGG 0.268706 4.3:-88397406 MS.gene000620:CDS
GGATATCATTGGAGGAAATA+TGG 0.293100 4.3:-88398141 MS.gene000620:CDS
ATTTGTTCCACCAAATTCTT+TGG 0.303785 4.3:+88397466 None:intergenic
CACTTTGAGAAGTCATTTGA+TGG 0.316280 4.3:-88398658 MS.gene000620:CDS
ATTTCAGTCCATCGATGAAT+TGG 0.333220 4.3:-88398757 MS.gene000620:intron
AACCTTAGAAAACAAGAAAT+TGG 0.335631 4.3:-88398715 MS.gene000620:CDS
AATAACAATAGTAATTTGAT+TGG 0.348469 4.3:-88398564 MS.gene000620:CDS
AACTTCTTCATGAGCTCTAT+AGG 0.350958 4.3:+88399551 None:intergenic
CCACAGTTCGGTACCTTGTT+CGG 0.368882 4.3:-88397599 MS.gene000620:CDS
GATGTGCTTACTTCTTTCTC+AGG 0.378143 4.3:+88398618 None:intergenic
GAGTCAAGTGTAACCACTTT+TGG 0.384251 4.3:+88397553 None:intergenic
AAATTTCAAGAGCTTATGTT+AGG 0.384990 4.3:-88398458 MS.gene000620:CDS
ACCAAATTCTTTGGTACCTT+AGG 0.394330 4.3:+88397475 None:intergenic
ACTTCTTCATGAGCTCTATA+GGG 0.416190 4.3:+88399552 None:intergenic
AAAGAATTTGGTGGAACAAA+TGG 0.417985 4.3:-88397464 MS.gene000620:CDS
ATCATATATCAACACTTCCT+TGG 0.423806 4.3:-88399589 MS.gene000620:CDS
ATTGAGTCAACATCAGGTTC+TGG 0.432635 4.3:-88397634 MS.gene000620:CDS
ATGCTTGTTGCTACTTATGA+AGG 0.438838 4.3:-88397685 MS.gene000620:CDS
AGGACTGAAGCTTCTGATAC+AGG 0.439171 4.3:-88398438 MS.gene000620:CDS
CCTGATGTTGACTCAATTTG+AGG 0.440623 4.3:+88397640 None:intergenic
GAGCATTTGAAATAAGCTCT+TGG 0.448164 4.3:+88398090 None:intergenic
TAAGCACATCATCAAAGAAA+AGG 0.475073 4.3:-88398605 MS.gene000620:CDS
GACTCAATTTGAGGAGGTTG+AGG 0.489379 4.3:+88397649 None:intergenic
CTCATCTTTCACAGCAAAGT+TGG 0.495364 4.3:+88399337 None:intergenic
TTGAAATAAGCTCTTGGACA+AGG 0.504759 4.3:+88398096 None:intergenic
CCTCAAATTGAGTCAACATC+AGG 0.509933 4.3:-88397640 MS.gene000620:CDS
AATTTGATTGGAATTAACAA+TGG 0.518843 4.3:-88398552 MS.gene000620:CDS
TGTTTATTTATAGAAGAAAG+AGG 0.523025 4.3:-88399390 MS.gene000620:intron
TTGTGAAGGATGGATATCAT+TGG 0.540562 4.3:-88398152 MS.gene000620:CDS
TCTTGGACAAGGGTTATCTC+TGG 0.540970 4.3:+88398107 None:intergenic
CCGAACTGTGGTTCACGCTA+CGG 0.542637 4.3:+88397611 None:intergenic
AATTGGAGGAGGAATTGAGA+AGG 0.543648 4.3:-88398740 MS.gene000620:CDS
TGAAATAAGCTCTTGGACAA+GGG 0.544753 4.3:+88398097 None:intergenic
TCAGTCCATCGATGAATTGG+AGG 0.547121 4.3:-88398754 MS.gene000620:intron
GGGAATAATGTTGAGATCCA+AGG 0.551140 4.3:+88399572 None:intergenic
TAAGGTACCAAAGAATTTGG+TGG 0.555336 4.3:-88397473 MS.gene000620:CDS
CTCACCAGCAGCACCAAAAG+TGG 0.557520 4.3:-88397566 MS.gene000620:CDS
TTCCTCCTCCAATTCATCGA+TGG 0.559559 4.3:+88398749 None:intergenic
CTTAGAAAACAAGAAATTGG+TGG 0.564034 4.3:-88398712 MS.gene000620:CDS
ATTGGAGGAGGAATTGAGAA+GGG 0.565937 4.3:-88398739 MS.gene000620:CDS
TGCTTGTTGCTACTTATGAA+GGG 0.570383 4.3:-88397684 MS.gene000620:CDS
CCGTAGCGTGAACCACAGTT+CGG 0.575774 4.3:-88397611 MS.gene000620:CDS
GTCCATCGATGAATTGGAGG+AGG 0.577129 4.3:-88398751 MS.gene000620:CDS
TGAAGGATGGATATCATTGG+AGG 0.578215 4.3:-88398149 MS.gene000620:CDS
TTTCTTACACGATTCTTCAT+CGG 0.585904 4.3:+88398509 None:intergenic
AAGAATCGTGTAAGAAACCA+AGG 0.593473 4.3:-88398503 MS.gene000620:CDS
GAGGTGAGTGACGCCGAACA+AGG 0.597975 4.3:+88397586 None:intergenic
TTCATAAGTAGCAACAAGCA+TGG 0.599378 4.3:+88397687 None:intergenic
GCTTGTTGCTACTTATGAAG+GGG 0.612450 4.3:-88397683 MS.gene000620:CDS
AGCAAAGTTGGTCATCCCCA+AGG 0.617875 4.3:+88399349 None:intergenic
TTCATCGGTAGAGCTACTCT+CGG 0.622483 4.3:+88398524 None:intergenic
ACCAAGAAAAGATTCACCTA+AGG 0.630943 4.3:-88397491 MS.gene000620:CDS
TTATTTATAGAAGAAAGAGG+TGG 0.649581 4.3:-88399387 MS.gene000620:intron
GATGTTGACTCAATTTGAGG+AGG 0.679037 4.3:+88397643 None:intergenic
CCGAACAAGGTACCGAACTG+TGG 0.683983 4.3:+88397599 None:intergenic
CAACTTTGCTGTGAAAGATG+AGG 0.688649 4.3:-88399336 MS.gene000620:intron
ATTGGTGGAAATGCTCTCAG+TGG 0.691318 4.3:-88398697 MS.gene000620:CDS
AGAATCGTGTAAGAAACCAA+GGG 0.696308 4.3:-88398502 MS.gene000620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGATTATTTATTTATTC+AGG - chr4.3:88399250-88399269 MS.gene000620:intron 10.0%
!! AATAACAATAGTAATTTGAT+TGG - chr4.3:88398420-88398439 MS.gene000620:intron 15.0%
!! AATCATCAATTATTAATTCA+AGG + chr4.3:88398069-88398088 None:intergenic 15.0%
!! ATCATCAATTATTAATTCAA+GGG + chr4.3:88398068-88398087 None:intergenic 15.0%
!!! ATATCAATTTTTATACTTAC+AGG + chr4.3:88397459-88397478 None:intergenic 15.0%
!! AATAGAGAAATATACATAAG+TGG + chr4.3:88397752-88397771 None:intergenic 20.0%
!! AATTTGATTGGAATTAACAA+TGG - chr4.3:88398432-88398451 MS.gene000620:intron 20.0%
!! TAAACAAGTTATAGCTTATA+TGG + chr4.3:88397926-88397945 None:intergenic 20.0%
!! TGTTTATTTATAGAAGAAAG+AGG - chr4.3:88397594-88397613 MS.gene000620:CDS 20.0%
!!! AAATTTGTTAAAGTCATGTT+TGG + chr4.3:88399003-88399022 None:intergenic 20.0%
!!! TTTTGTTTATTAGTCCATTA+TGG - chr4.3:88398140-88398159 MS.gene000620:CDS 20.0%
!!! TTTTTACTTTTTAGCCAAAA+GGG + chr4.3:88398171-88398190 None:intergenic 20.0%
! AAATTTCAAGAGCTTATGTT+AGG - chr4.3:88398526-88398545 MS.gene000620:CDS 25.0%
! AACCTTAGAAAACAAGAAAT+TGG - chr4.3:88398269-88398288 MS.gene000620:intron 25.0%
! ACTAAAGTTTGTATAAGTGT+TGG - chr4.3:88398769-88398788 MS.gene000620:intron 25.0%
! AGCATTTGATAAACGTAATT+TGG + chr4.3:88399197-88399216 None:intergenic 25.0%
! ATAATCACCATTCAAACTAA+TGG + chr4.3:88398121-88398140 None:intergenic 25.0%
! TGTAAGTTAAGTATCTTACA+AGG + chr4.3:88398572-88398591 None:intergenic 25.0%
! TTATTTATAGAAGAAAGAGG+TGG - chr4.3:88397597-88397616 MS.gene000620:CDS 25.0%
!! AACATAAGCTCTTGAAATTT+TGG + chr4.3:88398526-88398545 None:intergenic 25.0%
!! AACCAAAATTGTTTTCAGTT+CGG + chr4.3:88398696-88398715 None:intergenic 25.0%
!! TTAATATTTTCTTCTTCCCT+TGG + chr4.3:88398501-88398520 None:intergenic 25.0%
!! TTTGATACCATTAGTTTGAA+TGG - chr4.3:88398111-88398130 MS.gene000620:CDS 25.0%
!! TTTTCTTGGTTCAATATTCT+TGG + chr4.3:88399483-88399502 None:intergenic 25.0%
!!! GTTTTTACTTTTTAGCCAAA+AGG + chr4.3:88398172-88398191 None:intergenic 25.0%
!!! TGTTTTAAAAACCGAACAAA+TGG + chr4.3:88398738-88398757 None:intergenic 25.0%
ATCATATATCAACACTTCCT+TGG - chr4.3:88397395-88397414 MS.gene000620:CDS 30.0%
ATTTGTTCCACCAAATTCTT+TGG + chr4.3:88399521-88399540 None:intergenic 30.0%
CTTAGAAAACAAGAAATTGG+TGG - chr4.3:88398272-88398291 MS.gene000620:intron 30.0%
CTTGTTTACATAAGCTATCT+TGG - chr4.3:88397938-88397957 MS.gene000620:intron 30.0%
TAAGCACATCATCAAAGAAA+AGG - chr4.3:88398379-88398398 MS.gene000620:intron 30.0%
TTTCTTACACGATTCTTCAT+CGG + chr4.3:88398478-88398497 None:intergenic 30.0%
! AAAGAATTTGGTGGAACAAA+TGG - chr4.3:88399520-88399539 MS.gene000620:intron 30.0%
! AACCGAACTGAAAACAATTT+TGG - chr4.3:88398691-88398710 MS.gene000620:CDS 30.0%
! ATGCTCTTGTTTGAAATGTT+TGG - chr4.3:88397549-88397568 MS.gene000620:CDS 30.0%
!! ATCGCTTTTGCGTATATTTA+GGG + chr4.3:88398605-88398624 None:intergenic 30.0%
!!! CACCAATTTCTTGTTTTCTA+AGG + chr4.3:88398274-88398293 None:intergenic 30.0%
!!! CGATGTTTTAAAAACCAAAC+CGG - chr4.3:88398621-88398640 MS.gene000620:CDS 30.0%
AACTGGTTGAACCATTTGTT+CGG - chr4.3:88398724-88398743 MS.gene000620:CDS 35.0%
AACTTCTTCATGAGCTCTAT+AGG + chr4.3:88397436-88397455 None:intergenic 35.0%
AAGAATCGTGTAAGAAACCA+AGG - chr4.3:88398481-88398500 MS.gene000620:CDS 35.0%
AATTATGCGTATGCCATGTT+TGG - chr4.3:88397694-88397713 MS.gene000620:CDS 35.0%
ACCAAATTCTTTGGTACCTT+AGG + chr4.3:88399512-88399531 None:intergenic 35.0%
ACCAAGAAAAGATTCACCTA+AGG - chr4.3:88399493-88399512 MS.gene000620:intron 35.0%
ACCATTAAAAACTCCAAGGA+TGG - chr4.3:88398651-88398670 MS.gene000620:CDS 35.0%
ACTTCTTCATGAGCTCTATA+GGG + chr4.3:88397435-88397454 None:intergenic 35.0%
AGAATCGTGTAAGAAACCAA+GGG - chr4.3:88398482-88398501 MS.gene000620:CDS 35.0%
ATAGTGCACACTTCAACAAT+TGG + chr4.3:88397839-88397858 None:intergenic 35.0%
ATTTCAGTCCATCGATGAAT+TGG - chr4.3:88398227-88398246 MS.gene000620:intron 35.0%
GGATATCATTGGAGGAAATA+TGG - chr4.3:88398843-88398862 MS.gene000620:intron 35.0%
TCGAACCATTAAAAACTCCA+AGG - chr4.3:88398647-88398666 MS.gene000620:CDS 35.0%
TGAAATAAGCTCTTGGACAA+GGG + chr4.3:88398890-88398909 None:intergenic 35.0%
TTAAGCTGTCTATCCAAACA+TGG + chr4.3:88397710-88397729 None:intergenic 35.0%
TTCATAAGTAGCAACAAGCA+TGG + chr4.3:88399300-88399319 None:intergenic 35.0%
TTGAAATAAGCTCTTGGACA+AGG + chr4.3:88398891-88398910 None:intergenic 35.0%
TTGTGAAGGATGGATATCAT+TGG - chr4.3:88398832-88398851 MS.gene000620:intron 35.0%
! ACCTAAGGTACCAAAGAATT+TGG - chr4.3:88399508-88399527 MS.gene000620:intron 35.0%
! ACCTTAGGTGAATCTTTTCT+TGG + chr4.3:88399497-88399516 None:intergenic 35.0%
! AGCTTTACCTTCTTTTTGAC+AGG + chr4.3:88398936-88398955 None:intergenic 35.0%
! ATGCTTGTTGCTACTTATGA+AGG - chr4.3:88399299-88399318 MS.gene000620:intron 35.0%
! CACTTTGAGAAGTCATTTGA+TGG - chr4.3:88398326-88398345 MS.gene000620:intron 35.0%
! GAGCATTTGAAATAAGCTCT+TGG + chr4.3:88398897-88398916 None:intergenic 35.0%
! GCTTTACCTTCTTTTTGACA+GGG + chr4.3:88398935-88398954 None:intergenic 35.0%
! GTTTTTAATGGTTCGATGTC+CGG + chr4.3:88398643-88398662 None:intergenic 35.0%
! TAAGGTACCAAAGAATTTGG+TGG - chr4.3:88399511-88399530 MS.gene000620:intron 35.0%
! TCTGTGTTTTCAGATTGTGA+AGG - chr4.3:88398818-88398837 MS.gene000620:intron 35.0%
! TGCTTGTTGCTACTTATGAA+GGG - chr4.3:88399300-88399319 MS.gene000620:intron 35.0%
! TGTTTTCAGATTGTGAAGGA+TGG - chr4.3:88398822-88398841 MS.gene000620:intron 35.0%
!! AAAGCAACTTTTTCTCCTTG+GGG - chr4.3:88397620-88397639 MS.gene000620:CDS 35.0%
!! ACAAGTGCTGCTCTAAAATT+TGG + chr4.3:88399566-88399585 None:intergenic 35.0%
!! CATCGCTTTTGCGTATATTT+AGG + chr4.3:88398606-88398625 None:intergenic 35.0%
!! GAAAGCAACTTTTTCTCCTT+GGG - chr4.3:88397619-88397638 MS.gene000620:CDS 35.0%
!! TCGCTTTTGCGTATATTTAG+GGG + chr4.3:88398604-88398623 None:intergenic 35.0%
AAATCTTCGTAGTGCACGTT+TGG + chr4.3:88399223-88399242 None:intergenic 40.0%
AATTGGAGGAGGAATTGAGA+AGG - chr4.3:88398244-88398263 MS.gene000620:intron 40.0%
ATTGAGTCAACATCAGGTTC+TGG - chr4.3:88399350-88399369 MS.gene000620:CDS 40.0%
ATTGGAGGAGGAATTGAGAA+GGG - chr4.3:88398245-88398264 MS.gene000620:intron 40.0%
CCAAAAGGGTCATTCCATAA+TGG + chr4.3:88398157-88398176 None:intergenic 40.0%
CCTCAAATTGAGTCAACATC+AGG - chr4.3:88399344-88399363 MS.gene000620:CDS 40.0%
CTCATCTTTCACAGCAAAGT+TGG + chr4.3:88397650-88397669 None:intergenic 40.0%
GATGTGCTTACTTCTTTCTC+AGG + chr4.3:88398369-88398388 None:intergenic 40.0%
GGGAATAATGTTGAGATCCA+AGG + chr4.3:88397415-88397434 None:intergenic 40.0%
TGAAGGATGGATATCATTGG+AGG - chr4.3:88398835-88398854 MS.gene000620:intron 40.0%
TGCAGCCATTTCAGGAAAAT+TGG - chr4.3:88399586-88399605 MS.gene000620:CDS 40.0%
! CAACTTTGCTGTGAAAGATG+AGG - chr4.3:88397648-88397667 MS.gene000620:CDS 40.0%
! CCATTATGGAATGACCCTTT+TGG - chr4.3:88398154-88398173 MS.gene000620:CDS 40.0%
! GAGTCAAGTGTAACCACTTT+TGG + chr4.3:88399434-88399453 None:intergenic 40.0%
! GCCATCCTTGGAGTTTTTAA+TGG + chr4.3:88398655-88398674 None:intergenic 40.0%
! GCTTGTTGCTACTTATGAAG+GGG - chr4.3:88399301-88399320 MS.gene000620:intron 40.0%
! GTGCACCAATTTTCCTGAAA+TGG + chr4.3:88399594-88399613 None:intergenic 40.0%
!! CCTGATGTTGACTCAATTTG+AGG + chr4.3:88399347-88399366 None:intergenic 40.0%
!! GATGTTGACTCAATTTGAGG+AGG + chr4.3:88399344-88399363 None:intergenic 40.0%
!! GGAAAGCAACTTTTTCTCCT+TGG - chr4.3:88397618-88397637 MS.gene000620:CDS 40.0%
!!! ATTTTGGTTCACAGCTCAAC+TGG - chr4.3:88398707-88398726 MS.gene000620:CDS 40.0%
!!! GAACAGTTTTAAGCCATCCT+TGG + chr4.3:88398667-88398686 None:intergenic 40.0%
AAGCTGCCCTGTCAAAAAGA+AGG - chr4.3:88398926-88398945 MS.gene000620:intron 45.0%
AGGACTGAAGCTTCTGATAC+AGG - chr4.3:88398546-88398565 MS.gene000620:CDS 45.0%
ATTGGTGGAAATGCTCTCAG+TGG - chr4.3:88398287-88398306 MS.gene000620:intron 45.0%
GACTCAATTTGAGGAGGTTG+AGG + chr4.3:88399338-88399357 None:intergenic 45.0%
TAATGGTTCGATGTCCGGTT+TGG + chr4.3:88398638-88398657 None:intergenic 45.0%
TCAGTCCATCGATGAATTGG+AGG - chr4.3:88398230-88398249 MS.gene000620:intron 45.0%
TCTTGGACAAGGGTTATCTC+TGG + chr4.3:88398880-88398899 None:intergenic 45.0%
TTCATCGGTAGAGCTACTCT+CGG + chr4.3:88398463-88398482 None:intergenic 45.0%
TTCCTCCTCCAATTCATCGA+TGG + chr4.3:88398238-88398257 None:intergenic 45.0%
! TTCTTTTTGACAGGGCAGCT+TGG + chr4.3:88398927-88398946 None:intergenic 45.0%
CCACAGTTCGGTACCTTGTT+CGG - chr4.3:88399385-88399404 MS.gene000620:intron 50.0%
GTCCATCGATGAATTGGAGG+AGG - chr4.3:88398233-88398252 MS.gene000620:intron 50.0%
! AGCAAAGTTGGTCATCCCCA+AGG + chr4.3:88397638-88397657 None:intergenic 50.0%
! GCACTTGTTGCAGCCATTTC+AGG - chr4.3:88399578-88399597 MS.gene000620:CDS 50.0%
!!! GTAACCACTTTTGGTGCTGC+TGG + chr4.3:88399425-88399444 None:intergenic 50.0%
CCGAACTGTGGTTCACGCTA+CGG + chr4.3:88399376-88399395 None:intergenic 55.0%
CCGTAGCGTGAACCACAGTT+CGG - chr4.3:88399373-88399392 MS.gene000620:CDS 55.0%
CTCACCAGCAGCACCAAAAG+TGG - chr4.3:88399418-88399437 MS.gene000620:intron 55.0%
!! CCGAACAAGGTACCGAACTG+TGG + chr4.3:88399388-88399407 None:intergenic 55.0%
!!! CACTTTTGGTGCTGCTGGTG+AGG + chr4.3:88399420-88399439 None:intergenic 55.0%
GAGGTGAGTGACGCCGAACA+AGG + chr4.3:88399401-88399420 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 88397384 88399622 88397384 ID=MS.gene000620
chr4.3 mRNA 88397384 88399622 88397384 ID=MS.gene000620.t1;Parent=MS.gene000620
chr4.3 exon 88399548 88399622 88399548 ID=MS.gene000620.t1.exon1;Parent=MS.gene000620.t1
chr4.3 CDS 88399548 88399622 88399548 ID=cds.MS.gene000620.t1;Parent=MS.gene000620.t1
chr4.3 exon 88399337 88399399 88399337 ID=MS.gene000620.t1.exon2;Parent=MS.gene000620.t1
chr4.3 CDS 88399337 88399399 88399337 ID=cds.MS.gene000620.t1;Parent=MS.gene000620.t1
chr4.3 exon 88398434 88398772 88398434 ID=MS.gene000620.t1.exon3;Parent=MS.gene000620.t1
chr4.3 CDS 88398434 88398772 88398434 ID=cds.MS.gene000620.t1;Parent=MS.gene000620.t1
chr4.3 exon 88398059 88398175 88398059 ID=MS.gene000620.t1.exon4;Parent=MS.gene000620.t1
chr4.3 CDS 88398059 88398175 88398059 ID=cds.MS.gene000620.t1;Parent=MS.gene000620.t1
chr4.3 exon 88397384 88397734 88397384 ID=MS.gene000620.t1.exon5;Parent=MS.gene000620.t1
chr4.3 CDS 88397384 88397734 88397384 ID=cds.MS.gene000620.t1;Parent=MS.gene000620.t1
Gene Sequence

>MS.gene000620

ATGGATTGTTCATCATATATCAACACTTCCTTGGATCTCAACATTATTCCCTATAGAGCTCATGAAGAAGTTCCTGTAAGTATAAAAATTGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGCACTTTCACATGCTCTTGTTTGAAATGTTTGGCTCACAATATTTTCATTGTTTGTGTTTATTTATAGAAGAAAGAGGTGGAAAGCAACTTTTTCTCCTTGGGGATGACCAACTTTGCTGTGAAAGATGAGGTTAGTTTAGTTTAACAATTGTTGAATTATGCGTATGCCATGTTTGGATAGACAGCTTAATTAGATGTTTATAGTAGAACCACTTATGTATATTTCTCTATTACAAAAAGATTGAAAAAGTTCAAATTGTTTTCATAAGTTATCTTAGAGACTTAGTTTAGTTTAGCCAATTGTTGAAGTGTGCACTATTTAGATAAAGATCTTAATTATGCACTATTTCTAATACTAAAGATGAAATAAAATCAAATTGTTTCCATATAAGCTATAACTTGTTTACATAAGCTATCTTGGAAAGCTTTTGAACATATATCATAAGTTGTTTTCTTAAGCTATCTAAAACAATTGCACAAGTGTTTATGTCAGTAGATAAACTCAAATATGTCGATTCAAGCGTGCCCTTGAATTAATAATTGATGATTAATTGCACATAGCTATTTCATATTTGATACCATTAGTTTGAATGGTGATTATTTTGTTTATTAGTCCATTATGGAATGACCCTTTTGGCTAAAAAGTAAAAACTCTTAAATGATTCTAACATATGCTATTGATTTCAAATTTCAGTCCATCGATGAATTGGAGGAGGAATTGAGAAGGGTAACCTTAGAAAACAAGAAATTGGTGGAAATGCTCTCAGTGGTTTGTGAGAATTACAACACTTTGAGAAGTCATTTGATGGAATACATGAAGAGAAATCCTGAGAAAGAAGTAAGCACATCATCAAAGAAAAGGAAATCTGAAAGCAGCAATAATAACAATAGTAATTTGATTGGAATTAACAATGGAAATTCCGAGAGTAGCTCTACCGATGAAGAATCGTGTAAGAAACCAAGGGAAGAAGAAAATATTAAAGCCAAAATTTCAAGAGCTTATGTTAGGACTGAAGCTTCTGATACAGGCCTTGTAAGATACTTAACTTACATTTATTATTCCCCTAAATATACGCAAAAGCGATGTTTTAAAAACCAAACCGGACATCGAACCATTAAAAACTCCAAGGATGGCTTAAAACTGTTCAAATAACCGAACTGAAAACAATTTTGGTTCACAGCTCAACTGGTTGAACCATTTGTTCGGTTTTTAAAACATTCTTGAAAATACTAAAGTTTGTATAAGTGTTGGAGTTTGACATGTTTTTTTTTTTTCTTTCTGTGTTTTCAGATTGTGAAGGATGGATATCATTGGAGGAAATATGGACAAAAAGTGACCAGAGATAACCCTTGTCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTAAAGCTAAGTTCTAACTTTTGATTAAGTGCGTGTTTGCTTTTACGTCTTACCAAACATGACTTTAACAAATTTGATTTTGTCTCGAAGCATATGTTTGACTAGAAAAGATAAATAGTATCGTCTGCGTTGAGTTGAAAAATTTACACTACTTTTCATATCAAAAACACATCATATTCATAGTGAAAATCAAACATGCTTAAGCTACTTTACTTCAATCTCGATGATAATGAATTAAATTCTATTCCAAATTACGTTTATCAAATGCTCATCCAAACGTGCACTACGAAGATTTTTCTCATTTTTGATTATTTATTTATTCAGGTGCAAAGAAGTGTTGATGATCAATCCATGCTTGTTGCTACTTATGAAGGGGAGCACAATCATCCTCAACCTCCTCAAATTGAGTCAACATCAGGTTCTGGCCGTAGCGTGAACCACAGTTCGGTACCTTGTTCGGCGTCACTCACCTCACCAGCAGCACCAAAAGTGGTTACACTTGACTCAACAATTTCTAAGAATAGTAAAGATTCCAAGAATATTGAACCAAGAAAAGATTCACCTAAGGTACCAAAGAATTTGGTGGAACAAATGGCTACTTCATTGACAACTGATCCAAATTTTAGAGCAGCACTTGTTGCAGCCATTTCAGGAAAATTGGTGCACAATAATTAA
Protein sequence

>MS.gene000620.t1

MDCSSYINTSLDLNIIPYRAHEEVPKKEVESNFFSLGMTNFAVKDESIDELEEELRRVTLENKKLVEMLSVVCENYNTLRSHLMEYMKRNPEKEVSTSSKKRKSESSNNNNSNLIGINNGNSESSSTDEESCKKPREEENIKAKISRAYVRTEASDTGLIVKDGYHWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSMLVATYEGEHNHPQPPQIESTSGSGRSVNHSSVPCSASLTSPAAPKVVTLDSTISKNSKDSKNIEPRKDSPKVPKNLVEQMATSLTTDPNFRAALVAAISGKLVHNN