AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00073

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00073.t1 MTR_7g083950 54.955 222 68 7 7 223 10 204 2.48e-62 201
MS.gene00073.t1 MTR_6g091830 45.887 231 93 9 11 227 10 222 2.23e-52 176
MS.gene00073.t1 MTR_6g092140 45.887 231 93 9 11 227 10 222 2.33e-52 176
MS.gene00073.t1 MTR_3g006010 42.400 250 96 6 9 226 8 241 2.57e-50 171
MS.gene00073.t1 MTR_1g106050 69.565 115 19 3 91 205 2 100 2.45e-43 143
MS.gene00073.t1 MTR_3g045700 64.706 136 30 4 90 223 3 122 6.63e-43 148
MS.gene00073.t1 MTR_1g089085 53.205 156 53 6 72 226 20 156 1.22e-41 140
MS.gene00073.t1 MTR_1g093310 80.000 85 11 1 1 85 1 79 1.38e-41 137
MS.gene00073.t1 MTR_1g109090 55.245 143 46 5 83 223 8 134 1.54e-37 129
MS.gene00073.t1 MTR_1g100280 60.584 137 38 4 87 221 9 131 5.19e-36 130
MS.gene00073.t1 MTR_3g006120 51.095 137 50 4 91 226 4 124 7.79e-35 127
MS.gene00073.t1 MTR_3g085910 50.714 140 50 5 89 227 1 122 5.10e-34 123
MS.gene00073.t1 MTR_3g006100 50.365 137 51 4 91 226 4 124 1.22e-33 124
MS.gene00073.t1 MTR_3g006140 52.174 138 49 4 84 220 19 140 1.88e-33 124
MS.gene00073.t1 MTR_4g133490 57.664 137 41 4 91 226 2 122 6.59e-33 122
MS.gene00073.t1 MTR_3g006180 51.969 127 44 4 101 226 1 111 4.00e-32 120
MS.gene00073.t1 MTR_1g109340 44.970 169 55 5 1 153 2 148 1.51e-30 116
MS.gene00073.t1 MTR_7g070100 51.471 136 48 4 93 227 6 124 7.35e-28 108
MS.gene00073.t1 MTR_3g068220 50.370 135 50 4 90 223 3 121 6.16e-27 106
MS.gene00073.t1 MTR_1g105960 65.672 67 23 0 11 77 3 69 2.16e-23 91.3
MS.gene00073.t1 MTR_8g062700 40.876 137 61 2 1 137 36 152 9.04e-23 97.1
MS.gene00073.t1 MTR_8g062700 40.876 137 61 2 1 137 36 152 9.30e-23 97.1
MS.gene00073.t1 MTR_5g036670 55.435 92 39 1 1 92 37 126 2.32e-22 95.9
MS.gene00073.t1 MTR_6g008995 40.310 129 57 2 9 137 37 145 4.12e-20 89.0
MS.gene00073.t1 MTR_6g008970 40.146 137 62 3 1 137 57 173 1.58e-19 87.8
MS.gene00073.t1 MTR_4g133300 59.155 71 29 0 12 82 175 245 2.35e-19 84.3
MS.gene00073.t1 MTR_4g133300 51.389 72 32 1 8 79 11 79 3.30e-13 67.4
MS.gene00073.t1 MTR_4g133300 42.667 75 43 0 6 80 86 160 1.16e-11 63.2
MS.gene00073.t1 MTR_4g133470 59.155 71 29 0 12 82 175 245 3.27e-19 84.0
MS.gene00073.t1 MTR_4g133470 51.389 72 32 1 8 79 11 79 3.37e-13 67.4
MS.gene00073.t1 MTR_1g105955 60.000 65 26 0 11 75 18 82 4.00e-19 82.0
MS.gene00073.t1 MTR_1g105955 51.515 66 32 0 12 77 98 163 5.37e-15 71.2
MS.gene00073.t1 MTR_6g088340 31.169 231 91 9 11 223 16 196 3.35e-18 83.2
MS.gene00073.t1 MTR_3g006065 48.039 102 41 3 1 91 72 172 9.46e-18 78.6
MS.gene00073.t1 MTR_3g006065 52.113 71 31 1 9 79 8 75 1.20e-13 67.4
MS.gene00073.t1 MTR_1g091047 55.385 65 28 1 8 71 8 72 4.33e-17 73.6
MS.gene00073.t1 MTR_8g062350 41.748 103 56 2 6 106 11 111 8.24e-17 76.6
MS.gene00073.t1 MTR_1g104940 44.681 94 48 2 11 100 16 109 2.17e-16 73.2
MS.gene00073.t1 MTR_1g109550 49.398 83 34 2 1 76 1 82 2.66e-16 73.6
MS.gene00073.t1 MTR_3g006125 51.282 78 37 1 9 85 180 257 4.97e-16 75.5
MS.gene00073.t1 MTR_3g006125 49.315 73 36 1 9 80 89 161 5.23e-12 64.3
MS.gene00073.t1 MTR_3g006185 50.000 78 38 1 9 85 98 175 6.97e-16 73.2
MS.gene00073.t1 MTR_3g006185 49.315 73 36 1 9 80 8 80 3.31e-12 63.2
MS.gene00073.t1 MTR_1g104960 45.833 72 39 0 7 78 97 168 3.65e-15 71.2
MS.gene00073.t1 MTR_1g104960 43.836 73 41 0 8 80 12 84 2.35e-11 61.2
MS.gene00073.t1 MTR_1g104980 42.353 85 45 1 12 92 73 157 1.10e-14 70.1
MS.gene00073.t1 MTR_1g100260 48.810 84 39 2 10 89 25 108 1.37e-14 68.6
MS.gene00073.t1 MTR_3g006150 51.389 72 32 1 9 80 8 76 1.57e-14 69.3
MS.gene00073.t1 MTR_3g006150 53.521 71 32 1 9 78 90 160 5.40e-14 67.8
MS.gene00073.t1 MTR_7g013410 52.239 67 32 0 13 79 2 68 1.62e-14 68.9
MS.gene00073.t1 MTR_6g008995 39.252 107 45 2 31 137 2 88 2.41e-14 72.0
MS.gene00073.t1 MTR_2g097830 51.389 72 32 1 8 79 69 137 2.42e-14 68.9
MS.gene00073.t1 MTR_3g006105 49.351 77 38 1 9 84 99 175 7.55e-13 65.5
MS.gene00073.t1 MTR_3g006105 46.154 78 41 1 9 85 8 85 1.59e-12 64.3
MS.gene00073.t1 MTR_1g106560 52.542 59 13 1 28 86 16 59 9.27e-13 61.6
MS.gene00073.t1 MTR_1g105010 41.791 67 39 0 11 77 18 84 1.46e-12 62.8
MS.gene00073.t1 MTR_1g023820 58.000 50 21 0 39 88 17 66 3.12e-12 62.0
MS.gene00073.t1 MTR_1g104937 40.000 85 50 1 11 94 14 98 6.08e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00073.t1 AT3G01320 44.203 138 54 5 1 137 51 166 5.99e-22 94.7
MS.gene00073.t1 AT3G01320 44.203 138 54 5 1 137 51 166 5.99e-22 94.7
MS.gene00073.t1 AT1G24190 61.538 78 28 1 1 78 8 83 1.34e-21 93.6
MS.gene00073.t1 AT1G24190 61.538 78 28 1 1 78 8 83 1.39e-21 93.6
MS.gene00073.t1 AT1G24190 61.538 78 28 1 1 78 8 83 1.43e-21 93.6
MS.gene00073.t1 AT5G15020 41.538 130 56 2 8 137 51 160 1.77e-21 93.6
MS.gene00073.t1 AT5G15020 41.538 130 56 2 8 137 51 160 1.79e-21 93.2
MS.gene00073.t1 AT1G70060 60.256 78 29 1 1 78 8 83 4.98e-20 89.4
MS.gene00073.t1 AT1G70060 60.256 78 29 1 1 78 8 83 4.98e-20 89.4
MS.gene00073.t1 AT1G59890 53.086 81 38 0 9 89 45 125 5.54e-19 86.3
MS.gene00073.t1 AT1G59890 53.086 81 38 0 9 89 45 125 5.61e-19 86.3
MS.gene00073.t1 AT1G59890 53.086 81 38 0 9 89 45 125 5.65e-19 85.9
MS.gene00073.t1 AT1G59890 53.086 81 38 0 9 89 45 125 5.66e-19 85.9
MS.gene00073.t1 AT1G24200 50.000 70 35 0 8 77 13 82 1.58e-15 72.8
MS.gene00073.t1 AT1G27250 48.611 72 37 0 5 76 17 88 2.17e-15 71.2
MS.gene00073.t1 AT1G10450 52.857 70 33 0 9 78 33 102 2.22e-15 75.5
MS.gene00073.t1 AT1G10450 52.857 70 33 0 9 78 33 102 2.22e-15 75.5
MS.gene00073.t1 AT1G10450 52.857 70 33 0 9 78 84 153 2.23e-15 75.5
MS.gene00073.t1 AT4G12020 52.857 70 32 1 9 78 308 376 1.53e-14 73.2
MS.gene00073.t1 AT4G12020 52.857 70 32 1 9 78 308 376 1.99e-14 72.8
MS.gene00073.t1 AT4G12020 52.857 70 32 1 9 78 308 376 1.99e-14 72.8
MS.gene00073.t1 AT4G12020 52.857 70 32 1 9 78 308 376 1.99e-14 72.8
MS.gene00073.t1 AT4G12020 52.857 70 32 1 9 78 308 376 2.05e-14 72.8
MS.gene00073.t1 AT4G12020 52.857 70 32 1 9 78 308 376 2.07e-14 72.8
MS.gene00073.t1 AT4G12020 52.857 70 32 1 9 78 308 376 2.07e-14 72.8
MS.gene00073.t1 AT4G12020 52.857 70 32 1 9 78 308 376 2.08e-14 72.8
MS.gene00073.t1 AT4G12020 52.857 70 32 1 9 78 308 376 2.12e-14 72.8
MS.gene00073.t1 AT4G12020 52.857 70 32 1 9 78 308 376 2.12e-14 72.8
MS.gene00073.t1 AT4G12020 52.857 70 32 1 9 78 241 309 2.26e-14 72.8
MS.gene00073.t1 AT1G70030 42.553 94 53 1 9 101 22 115 5.58e-14 67.0
MS.gene00073.t1 AT5G15025 50.704 71 35 0 8 78 46 116 5.70e-14 67.0
MS.gene00073.t1 AT1G70030 36.641 131 62 3 9 139 22 131 8.89e-14 66.6
MS.gene00073.t1 AT1G27220 44.737 76 42 0 8 83 13 88 1.15e-13 67.4
MS.gene00073.t1 AT1G70030 42.553 94 53 1 9 101 11 104 1.62e-13 66.6
MS.gene00073.t1 AT5G15040 45.833 72 39 0 12 83 6 77 4.64e-13 63.5
MS.gene00073.t1 AT5G15040 45.833 72 39 0 12 83 6 77 4.64e-13 63.5
MS.gene00073.t1 AT5G15040 45.833 72 39 0 12 83 6 77 4.64e-13 63.5
MS.gene00073.t1 AT5G35610 42.000 100 55 2 13 111 14 111 7.60e-13 64.7
MS.gene00073.t1 AT1G24210 45.312 64 35 0 8 71 13 76 2.48e-11 60.5

Find 46 sgRNAs with CRISPR-Local

Find 64 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGCATACAAATTTAATTT+TGG 0.084238 2.1:+59872452 MS.gene00073:CDS
ACCTTCTTTGTTCTTGTAAA+TGG 0.109229 2.1:-59872924 None:intergenic
AATCTACTGGAGAAATTTCT+TGG 0.234930 2.1:+59872668 MS.gene00073:CDS
GACGATCTCTTTCAGTTTGC+CGG 0.249250 2.1:+59872615 MS.gene00073:CDS
AAATTTCTTGGAATCCTTCT+TGG 0.269320 2.1:+59872680 MS.gene00073:CDS
CCTTCTTTGTTCTTGTAAAT+GGG 0.329673 2.1:-59872923 None:intergenic
CTTGCCATGGTTGCTAATAA+AGG 0.331817 2.1:-59872757 None:intergenic
GCAGTAAAGGAGCTGTTTAA+AGG 0.344725 2.1:+59872432 MS.gene00073:CDS
ATCGTCAAAATCTAGTGTTT+TGG 0.353186 2.1:-59872598 None:intergenic
TTGGTTGGGTATGCTAATAA+AGG 0.390018 2.1:-59872790 None:intergenic
TTGCCGGTGTATGCAAGAAT+TGG 0.398043 2.1:+59872631 MS.gene00073:CDS
AAACGTTCTGATGAGTTTCA+AGG 0.401132 2.1:+59872377 MS.gene00073:CDS
GAAGAACCATTACTACTTCA+AGG 0.405321 2.1:+59872708 MS.gene00073:CDS
AGTTTATTGCTTGAAGATGA+TGG 0.413789 2.1:+59872815 MS.gene00073:CDS
CCATTCGTCTCAAGTTGAAA+TGG 0.424230 2.1:-59872516 None:intergenic
TGATTTCATGTTCCTTTGGC+AGG 0.451994 2.1:-59872488 None:intergenic
AGTGTGATTTCATGTTCCTT+TGG 0.456196 2.1:-59872492 None:intergenic
AGAGAATTGTGAACTTCCTT+CGG 0.458702 2.1:+59872557 MS.gene00073:CDS
CATGATCGCTTGCCACTACA+TGG 0.464402 2.1:-59872732 None:intergenic
AGGTGTTGTGGCGGCAGTAA+AGG 0.465057 2.1:+59872419 MS.gene00073:CDS
AAAATGTAACATAGTTATAG+TGG 0.472211 2.1:-59872851 None:intergenic
CAGTAAAGGAGCTGTTTAAA+GGG 0.479626 2.1:+59872433 MS.gene00073:CDS
TTCATGTTCCTTTGGCAGGA+AGG 0.481994 2.1:-59872484 None:intergenic
GTCTATCAATCTCGAAATTG+TGG 0.493729 2.1:+59873062 MS.gene00073:CDS
CCGGTGTATGCAAGAATTGG+AGG 0.497149 2.1:+59872634 MS.gene00073:CDS
CCATTTCAACTTGAGACGAA+TGG 0.510483 2.1:+59872516 MS.gene00073:CDS
CCCATTTACAAGAACAAAGA+AGG 0.515788 2.1:+59872923 MS.gene00073:CDS
CATGGACCTTGAAGTAGTAA+TGG 0.525481 2.1:-59872714 None:intergenic
CTTTATTAGCAACCATGGCA+AGG 0.525891 2.1:+59872758 MS.gene00073:CDS
ATCAATCTCGAAATTGTGGA+TGG 0.526711 2.1:+59873066 MS.gene00073:CDS
CTCAAACCATGACGATCGAC+TGG 0.530171 2.1:+59872293 MS.gene00073:CDS
TGGTTCTTCAGATGCCAAGA+AGG 0.541790 2.1:-59872694 None:intergenic
TTTATTAGCAACCATGGCAA+GGG 0.548269 2.1:+59872759 MS.gene00073:CDS
TGTTCCTTTATTAGCAACCA+TGG 0.550724 2.1:+59872753 MS.gene00073:CDS
GATCATAGAATTGATATAAG+AGG 0.552187 2.1:+59872399 MS.gene00073:CDS
CGGTGTATGCAAGAATTGGA+GGG 0.575557 2.1:+59872635 MS.gene00073:CDS
AATTGATATAAGAGGTGTTG+TGG 0.583198 2.1:+59872407 MS.gene00073:CDS
CTACTTCAAGGTCCATGTAG+TGG 0.613260 2.1:+59872720 MS.gene00073:CDS
ATTCAACACCTTCCTGCCAA+AGG 0.618562 2.1:+59872476 MS.gene00073:CDS
TCAATCTCGAAATTGTGGAT+GGG 0.618953 2.1:+59873067 MS.gene00073:CDS
TGATATAAGAGGTGTTGTGG+CGG 0.630919 2.1:+59872410 MS.gene00073:CDS
CGATCGACTGGCATATCTTG+CGG 0.639832 2.1:+59872305 MS.gene00073:CDS
ATGATATCAAGCACATCCGA+AGG 0.639846 2.1:-59872573 None:intergenic
AGGAACATGATCCCTTGCCA+TGG 0.650753 2.1:-59872770 None:intergenic
CCTCCAATTCTTGCATACAC+CGG 0.651637 2.1:-59872634 None:intergenic
GATATGCCAGTCGATCGTCA+TGG 0.670686 2.1:-59872299 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGTAACATAGTTATAG+TGG - chr2.1:59872854-59872873 None:intergenic 20.0%
!! TATAATTGTTAATTCCGATA+GGG - chr2.1:59872959-59872978 None:intergenic 20.0%
!! TTATAATTGTTAATTCCGAT+AGG - chr2.1:59872960-59872979 None:intergenic 20.0%
! ATAATTGTTAATTCCGATAG+GGG - chr2.1:59872958-59872977 None:intergenic 25.0%
! GATCATAGAATTGATATAAG+AGG + chr2.1:59872399-59872418 MS.gene00073:CDS 25.0%
!! AACTATGTTACATTTTCTAG+TGG + chr2.1:59872858-59872877 MS.gene00073:CDS 25.0%
!! TCTTCAAGCAATAAACTTTT+TGG - chr2.1:59872812-59872831 None:intergenic 25.0%
!!! AAGCAATAAACTTTTTGGTT+GGG - chr2.1:59872807-59872826 None:intergenic 25.0%
!!! AGGGCATACAAATTTAATTT+TGG + chr2.1:59872452-59872471 MS.gene00073:CDS 25.0%
!!! GGGCATACAAATTTAATTTT+GGG + chr2.1:59872453-59872472 MS.gene00073:CDS 25.0%
!!! TTCTAGTGGATATTTTATCA+TGG + chr2.1:59872872-59872891 MS.gene00073:CDS 25.0%
AAATTTCTTGGAATCCTTCT+TGG + chr2.1:59872680-59872699 MS.gene00073:CDS 30.0%
AATCTACTGGAGAAATTTCT+TGG + chr2.1:59872668-59872687 MS.gene00073:CDS 30.0%
ACCTTCTTTGTTCTTGTAAA+TGG - chr2.1:59872927-59872946 None:intergenic 30.0%
AGTTTATTGCTTGAAGATGA+TGG + chr2.1:59872815-59872834 MS.gene00073:CDS 30.0%
ATACTCAGAAGAATTTGTCT+TGG + chr2.1:59873013-59873032 MS.gene00073:intron 30.0%
CCTTCTTTGTTCTTGTAAAT+GGG - chr2.1:59872926-59872945 None:intergenic 30.0%
! ATCGTCAAAATCTAGTGTTT+TGG - chr2.1:59872601-59872620 None:intergenic 30.0%
! GGGTTTTTCATAAAATCTAC+TGG + chr2.1:59872655-59872674 MS.gene00073:CDS 30.0%
! TGGATATTTTATCATGGTGA+GGG + chr2.1:59872878-59872897 MS.gene00073:CDS 30.0%
!! AATTGATATAAGAGGTGTTG+TGG + chr2.1:59872407-59872426 MS.gene00073:CDS 30.0%
!! CAAGCAATAAACTTTTTGGT+TGG - chr2.1:59872808-59872827 None:intergenic 30.0%
AAACGTTCTGATGAGTTTCA+AGG + chr2.1:59872377-59872396 MS.gene00073:CDS 35.0%
AGAGAATTGTGAACTTCCTT+CGG + chr2.1:59872557-59872576 MS.gene00073:CDS 35.0%
AGTGTGATTTCATGTTCCTT+TGG - chr2.1:59872495-59872514 None:intergenic 35.0%
ATCAATCTCGAAATTGTGGA+TGG + chr2.1:59873066-59873085 MS.gene00073:CDS 35.0%
CAGTAAAGGAGCTGTTTAAA+GGG + chr2.1:59872433-59872452 MS.gene00073:CDS 35.0%
CCCATTTACAAGAACAAAGA+AGG + chr2.1:59872923-59872942 MS.gene00073:CDS 35.0%
GAAGAACCATTACTACTTCA+AGG + chr2.1:59872708-59872727 MS.gene00073:CDS 35.0%
GACGAATGGAAAAACATTGA+AGG + chr2.1:59872530-59872549 MS.gene00073:CDS 35.0%
GTATTTGTCAAAAGCAAGCA+AGG - chr2.1:59872997-59873016 None:intergenic 35.0%
GTCTATCAATCTCGAAATTG+TGG + chr2.1:59873062-59873081 MS.gene00073:CDS 35.0%
TCAATCTCGAAATTGTGGAT+GGG + chr2.1:59873067-59873086 MS.gene00073:CDS 35.0%
TGTTCCTTTATTAGCAACCA+TGG + chr2.1:59872753-59872772 MS.gene00073:CDS 35.0%
TTGGTTGGGTATGCTAATAA+AGG - chr2.1:59872793-59872812 None:intergenic 35.0%
TTTATTAGCAACCATGGCAA+GGG + chr2.1:59872759-59872778 MS.gene00073:CDS 35.0%
! GTGGATATTTTATCATGGTG+AGG + chr2.1:59872877-59872896 MS.gene00073:CDS 35.0%
!! GTCTTGGTGATTTTATGTCT+AGG + chr2.1:59873029-59873048 MS.gene00073:intron 35.0%
AAGGTAATCGATACCCCTAT+CGG + chr2.1:59872942-59872961 MS.gene00073:intron 40.0%
ATGATATCAAGCACATCCGA+AGG - chr2.1:59872576-59872595 None:intergenic 40.0%
CATGGACCTTGAAGTAGTAA+TGG - chr2.1:59872717-59872736 None:intergenic 40.0%
CCATTTCAACTTGAGACGAA+TGG + chr2.1:59872516-59872535 MS.gene00073:CDS 40.0%
CTTGCCATGGTTGCTAATAA+AGG - chr2.1:59872760-59872779 None:intergenic 40.0%
CTTTATTAGCAACCATGGCA+AGG + chr2.1:59872758-59872777 MS.gene00073:CDS 40.0%
GCAGTAAAGGAGCTGTTTAA+AGG + chr2.1:59872432-59872451 MS.gene00073:CDS 40.0%
TGATTTCATGTTCCTTTGGC+AGG - chr2.1:59872491-59872510 None:intergenic 40.0%
!! CCATTCGTCTCAAGTTGAAA+TGG - chr2.1:59872519-59872538 None:intergenic 40.0%
!! TGATATAAGAGGTGTTGTGG+CGG + chr2.1:59872410-59872429 MS.gene00073:CDS 40.0%
ATTCAACACCTTCCTGCCAA+AGG + chr2.1:59872476-59872495 MS.gene00073:CDS 45.0%
CCTCCAATTCTTGCATACAC+CGG - chr2.1:59872637-59872656 None:intergenic 45.0%
CGGTGTATGCAAGAATTGGA+GGG + chr2.1:59872635-59872654 MS.gene00073:CDS 45.0%
CTACTTCAAGGTCCATGTAG+TGG + chr2.1:59872720-59872739 MS.gene00073:CDS 45.0%
GACGATCTCTTTCAGTTTGC+CGG + chr2.1:59872615-59872634 MS.gene00073:CDS 45.0%
TGGTTCTTCAGATGCCAAGA+AGG - chr2.1:59872697-59872716 None:intergenic 45.0%
TGTCAAAAGCAAGCAAGGCA+CGG - chr2.1:59872992-59873011 None:intergenic 45.0%
TTCATGTTCCTTTGGCAGGA+AGG - chr2.1:59872487-59872506 None:intergenic 45.0%
TTGCCGGTGTATGCAAGAAT+TGG + chr2.1:59872631-59872650 MS.gene00073:CDS 45.0%
AGGAACATGATCCCTTGCCA+TGG - chr2.1:59872773-59872792 None:intergenic 50.0%
CATGATCGCTTGCCACTACA+TGG - chr2.1:59872735-59872754 None:intergenic 50.0%
CCGGTGTATGCAAGAATTGG+AGG + chr2.1:59872634-59872653 MS.gene00073:CDS 50.0%
CGATCGACTGGCATATCTTG+CGG + chr2.1:59872305-59872324 MS.gene00073:CDS 50.0%
CTCAAACCATGACGATCGAC+TGG + chr2.1:59872293-59872312 MS.gene00073:CDS 50.0%
GATATGCCAGTCGATCGTCA+TGG - chr2.1:59872302-59872321 None:intergenic 50.0%
! AGGTGTTGTGGCGGCAGTAA+AGG + chr2.1:59872419-59872438 MS.gene00073:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 59872282 59873107 59872282 ID=MS.gene00073
chr2.1 mRNA 59872282 59873107 59872282 ID=MS.gene00073.t1;Parent=MS.gene00073
chr2.1 exon 59872282 59872944 59872282 ID=MS.gene00073.t1.exon1;Parent=MS.gene00073.t1
chr2.1 CDS 59872282 59872944 59872282 ID=cds.MS.gene00073.t1;Parent=MS.gene00073.t1
chr2.1 exon 59873051 59873107 59873051 ID=MS.gene00073.t1.exon2;Parent=MS.gene00073.t1
chr2.1 CDS 59873051 59873107 59873051 ID=cds.MS.gene00073.t1;Parent=MS.gene00073.t1
Gene Sequence

>MS.gene00073

ATGAAGCTCTGCTCAAACCATGACGATCGACTGGCATATCTTGCGGCAGTCAAATTTGCATTTCAACATAACATGATGAAGTATGATCAATTCTTAAACGTTCTGATGAGTTTCAAGGATCATAGAATTGATATAAGAGGTGTTGTGGCGGCAGTAAAGGAGCTGTTTAAAGGGCATACAAATTTAATTTTGGGATTCAACACCTTCCTGCCAAAGGAACATGAAATCACACTTCCATTTCAACTTGAGACGAATGGAAAAACATTGAAGGTAGAAGAGAATTGTGAACTTCCTTCGGATGTGCTTGATATCATTTCCAAAACACTAGATTTTGACGATCTCTTTCAGTTTGCCGGTGTATGCAAGAATTGGAGGGTTTTTCATAAAATCTACTGGAGAAATTTCTTGGAATCCTTCTTGGCATCTGAAGAACCATTACTACTTCAAGGTCCATGTAGTGGCAAGCGATCATGTTCCTTTATTAGCAACCATGGCAAGGGATCATGTTCCTTTATTAGCATACCCAACCAAAAAGTTTATTGCTTGAAGATGATGGAATACTTCTTCAACCACTATAACTATGTTACATTTTCTAGTGGATATTTTATCATGGTGAGGGATGATGTTTATGTGCTAATCAACCCATTTACAAGAACAAAGAAGGTAATCGATACCCCTATCGGAATTAACAATTATAATTGTACTGACCGTGCCTTGCTTGCTTTTGACAAATACTCAGAAGAATTTGTCTTGGTGATTTTATGTCTAGGTCGTTTGCATGTCTATCAATCTCGAAATTGTGGATGGGTTACTTATTCAACAATGA
Protein sequence

>MS.gene00073.t1

MKLCSNHDDRLAYLAAVKFAFQHNMMKYDQFLNVLMSFKDHRIDIRGVVAAVKELFKGHTNLILGFNTFLPKEHEITLPFQLETNGKTLKVEENCELPSDVLDIISKTLDFDDLFQFAGVCKNWRVFHKIYWRNFLESFLASEEPLLLQGPCSGKRSCSFISNHGKGSCSFISIPNQKVYCLKMMEYFFNHYNYVTFSSGYFIMVRDDVYVLINPFTRTKKVVCMSINLEIVDGLLIQQ