AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000840.t1 MTR_8g446900 88.854 314 34 1 1 314 1 313 0.0 578
MS.gene000840.t1 MTR_8g100050 49.338 302 143 4 3 297 101 399 1.47e-92 290
MS.gene000840.t1 MTR_8g100050 49.338 302 143 4 3 297 101 399 1.27e-91 290
MS.gene000840.t1 MTR_2g005240 46.980 298 149 4 2 293 64 358 6.84e-85 269
MS.gene000840.t1 MTR_8g027440 45.215 303 152 8 2 296 70 366 1.70e-77 249
MS.gene000840.t1 MTR_4g060460 41.667 324 165 7 1 304 93 412 1.10e-76 250
MS.gene000840.t1 MTR_4g060460 41.667 324 165 7 1 304 93 412 1.38e-76 249
MS.gene000840.t1 MTR_2g093740 41.667 312 159 6 1 293 95 402 2.64e-76 247
MS.gene000840.t1 MTR_4g088210 42.484 306 154 6 7 293 78 380 7.23e-76 246
MS.gene000840.t1 MTR_4g088210 42.484 306 154 6 7 293 78 380 8.48e-76 246
MS.gene000840.t1 MTR_2g093740 41.667 312 159 6 1 293 95 402 1.24e-75 246
MS.gene000840.t1 MTR_2g093740 41.667 312 159 6 1 293 95 402 2.50e-75 246
MS.gene000840.t1 MTR_4g021580 44.482 299 152 6 3 293 61 353 2.44e-74 240
MS.gene000840.t1 MTR_4g021580 44.482 299 152 6 3 293 61 353 4.34e-74 241
MS.gene000840.t1 MTR_7g062540 43.771 297 153 6 3 291 56 346 8.28e-74 240
MS.gene000840.t1 MTR_2g093740 40.000 325 159 7 1 293 95 415 1.71e-72 237
MS.gene000840.t1 MTR_2g093740 40.000 325 159 7 1 293 95 415 6.33e-72 237
MS.gene000840.t1 MTR_2g014770 42.244 303 156 5 7 293 92 391 9.15e-72 233
MS.gene000840.t1 MTR_2g093740 40.000 325 159 7 1 293 95 415 1.51e-71 237
MS.gene000840.t1 MTR_2g014770 42.244 303 156 5 7 293 92 391 3.94e-71 233
MS.gene000840.t1 MTR_2g093740 43.137 255 132 5 48 293 22 272 8.75e-66 218
MS.gene000840.t1 MTR_2g093740 43.137 255 132 5 48 293 22 272 2.09e-65 218
MS.gene000840.t1 MTR_5g076270 42.667 300 158 8 2 291 65 360 3.19e-65 220
MS.gene000840.t1 MTR_8g079492 42.617 298 158 7 3 291 65 358 3.88e-65 220
MS.gene000840.t1 MTR_8g079492 42.617 298 158 7 3 291 65 358 4.16e-65 220
MS.gene000840.t1 MTR_1g024025 44.147 299 150 9 2 289 84 376 7.29e-65 221
MS.gene000840.t1 MTR_2g018690 43.478 299 155 8 3 291 65 359 1.57e-64 219
MS.gene000840.t1 MTR_2g043250 41.391 302 162 7 3 294 64 360 1.31e-63 218
MS.gene000840.t1 MTR_3g064050 41.806 299 162 7 2 291 67 362 1.52e-63 215
MS.gene000840.t1 MTR_4g124900 40.000 305 162 7 3 294 64 360 4.81e-63 216
MS.gene000840.t1 MTR_4g124900 40.000 305 162 7 3 294 64 360 5.07e-63 216
MS.gene000840.t1 MTR_2g093740 41.045 268 132 6 48 293 22 285 4.64e-62 208
MS.gene000840.t1 MTR_2g093740 41.045 268 132 6 48 293 22 285 9.75e-62 208
MS.gene000840.t1 MTR_8g079492 43.214 280 146 7 21 291 1 276 6.02e-61 208
MS.gene000840.t1 MTR_8g101360 40.656 305 159 8 1 291 71 367 8.68e-60 206
MS.gene000840.t1 MTR_2g094570 34.104 346 186 6 5 309 50 394 1.50e-54 188
MS.gene000840.t1 MTR_2g094570 34.104 346 186 6 5 309 50 394 2.34e-54 188
MS.gene000840.t1 MTR_2g094570 34.104 346 186 6 5 309 106 450 3.17e-54 189
MS.gene000840.t1 MTR_4g058930 33.333 345 174 7 12 307 56 393 2.17e-52 182
MS.gene000840.t1 MTR_4g058930 33.333 345 174 7 12 307 56 393 2.73e-52 183
MS.gene000840.t1 MTR_1g094960 33.934 333 173 7 1 289 53 382 1.11e-51 180
MS.gene000840.t1 MTR_1g064430 31.351 370 192 10 8 315 82 451 1.07e-48 173
MS.gene000840.t1 MTR_1g064430 31.351 370 192 10 8 315 69 438 1.33e-48 172
MS.gene000840.t1 MTR_7g101280 31.180 356 178 12 8 307 73 417 5.94e-45 162
MS.gene000840.t1 MTR_0041s0110 31.180 356 178 12 8 307 73 417 5.94e-45 162
MS.gene000840.t1 MTR_5g040880 29.758 289 181 6 12 292 60 334 1.55e-38 143
MS.gene000840.t1 MTR_3g073420 28.653 349 202 9 12 319 66 408 5.07e-38 142
MS.gene000840.t1 MTR_7g101275 31.769 277 166 7 8 271 34 300 1.72e-37 138
MS.gene000840.t1 MTR_5g061220 28.859 298 190 4 14 289 70 367 7.94e-36 135
MS.gene000840.t1 MTR_2g024430 29.371 286 175 7 14 289 72 340 2.19e-34 131
MS.gene000840.t1 MTR_1g058210 29.568 301 187 8 1 289 51 338 5.49e-32 124
MS.gene000840.t1 MTR_5g082140 28.105 306 189 8 12 306 61 346 1.38e-30 120
MS.gene000840.t1 MTR_0041s0120 29.452 292 165 9 8 271 34 312 6.16e-28 112
MS.gene000840.t1 MTR_2g006270 28.920 287 179 8 13 289 65 336 5.12e-26 107
MS.gene000840.t1 MTR_5g040740 27.881 269 173 6 12 273 61 315 1.80e-25 105
MS.gene000840.t1 MTR_5g060630 25.231 325 187 13 9 289 58 370 1.12e-22 98.6
MS.gene000840.t1 MTR_5g460740 25.231 325 187 13 9 289 58 370 1.12e-22 98.6
MS.gene000840.t1 MTR_5g062970 32.432 148 96 1 9 152 81 228 1.17e-20 89.4
MS.gene000840.t1 MTR_5g060780 27.000 300 176 14 10 289 59 335 2.34e-19 88.2
MS.gene000840.t1 MTR_2g006380 25.338 296 173 12 13 289 72 338 3.77e-19 87.8
MS.gene000840.t1 MTR_5g460920 27.483 302 172 15 10 289 59 335 7.38e-19 86.7
MS.gene000840.t1 MTR_5g061890 26.667 300 177 14 10 289 59 335 8.91e-18 83.6
MS.gene000840.t1 MTR_3g064050 45.378 119 59 4 179 291 7 125 1.62e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000840.t1 AT5G62000 47.697 304 149 4 1 297 101 401 1.43e-94 298
MS.gene000840.t1 AT5G62000 47.697 304 149 4 1 297 101 401 1.43e-94 298
MS.gene000840.t1 AT5G62000 47.697 304 149 4 1 297 101 401 1.43e-94 298
MS.gene000840.t1 AT5G62000 47.697 304 149 4 1 297 101 401 1.43e-94 298
MS.gene000840.t1 AT5G62000 47.855 303 148 4 2 297 102 401 1.69e-94 298
MS.gene000840.t1 AT1G59750 44.295 298 155 5 1 291 62 355 1.83e-80 257
MS.gene000840.t1 AT1G59750 44.295 298 155 5 1 291 62 355 2.04e-80 257
MS.gene000840.t1 AT1G59750 44.295 298 155 5 1 291 62 355 2.26e-80 257
MS.gene000840.t1 AT1G59750 44.295 298 155 5 1 291 62 355 2.26e-80 257
MS.gene000840.t1 AT3G61830 44.781 297 150 7 2 291 16 305 7.14e-79 250
MS.gene000840.t1 AT3G61830 44.781 297 150 7 2 291 67 356 3.53e-78 250
MS.gene000840.t1 AT2G46530 43.434 297 156 6 2 292 63 353 3.53e-77 247
MS.gene000840.t1 AT2G46530 43.434 297 156 6 2 292 84 374 7.02e-77 247
MS.gene000840.t1 AT5G60450 42.188 320 163 7 1 302 80 395 8.89e-75 244
MS.gene000840.t1 AT5G60450 42.188 320 163 7 1 302 104 419 1.87e-74 244
MS.gene000840.t1 AT4G23980 43.919 296 151 8 4 291 56 344 2.14e-73 238
MS.gene000840.t1 AT4G23980 43.919 296 151 8 4 291 56 344 2.18e-73 238
MS.gene000840.t1 AT2G33860 39.145 304 166 4 6 293 92 392 2.26e-70 229
MS.gene000840.t1 AT1G19220 42.384 302 159 8 3 294 64 360 2.46e-66 225
MS.gene000840.t1 AT2G46530 44.770 239 121 5 59 292 34 266 1.03e-65 215
MS.gene000840.t1 AT1G19850 43.522 301 150 11 2 289 84 377 1.30e-65 221
MS.gene000840.t1 AT1G19850 43.522 301 150 11 2 289 95 388 1.36e-65 221
MS.gene000840.t1 AT5G37020 42.617 298 159 7 3 291 64 358 1.48e-65 220
MS.gene000840.t1 AT5G37020 42.617 298 159 7 3 291 64 358 3.38e-65 219
MS.gene000840.t1 AT5G20730 41.584 303 161 9 3 294 65 362 1.18e-63 218
MS.gene000840.t1 AT5G20730 41.584 303 161 9 3 294 65 362 1.73e-63 217
MS.gene000840.t1 AT5G20730 41.391 302 162 8 3 294 65 361 1.75e-63 217
MS.gene000840.t1 AT2G33860 42.616 237 128 3 62 293 2 235 9.04e-63 206
MS.gene000840.t1 AT1G35540 38.225 293 168 6 4 291 70 354 2.47e-61 206
MS.gene000840.t1 AT1G34310 37.543 293 170 6 4 291 70 354 3.00e-61 205
MS.gene000840.t1 AT1G34170 39.865 296 161 9 4 291 68 354 5.02e-61 202
MS.gene000840.t1 AT1G35240 38.305 295 169 7 4 293 70 356 1.36e-60 203
MS.gene000840.t1 AT1G30330 41.611 298 162 7 3 291 67 361 1.45e-60 208
MS.gene000840.t1 AT1G30330 41.611 298 162 7 3 291 67 361 1.45e-60 208
MS.gene000840.t1 AT1G30330 41.611 298 162 7 3 291 65 359 1.91e-60 207
MS.gene000840.t1 AT1G34410 37.543 293 170 7 4 291 70 354 2.34e-58 197
MS.gene000840.t1 AT1G34390 38.567 293 165 8 4 291 70 352 3.70e-57 194
MS.gene000840.t1 AT5G37020 45.763 236 119 5 62 291 31 263 5.68e-57 196
MS.gene000840.t1 AT1G35520 36.177 293 174 6 4 291 70 354 1.06e-56 193
MS.gene000840.t1 AT2G28350 33.923 339 170 7 4 289 44 381 1.54e-55 191
MS.gene000840.t1 AT2G28350 33.923 339 170 7 4 289 44 381 1.67e-55 191
MS.gene000840.t1 AT1G34170 38.983 295 139 10 4 291 68 328 5.64e-54 183
MS.gene000840.t1 AT1G34170 38.983 295 139 10 4 291 68 328 3.04e-53 183
MS.gene000840.t1 AT4G30080 33.837 331 177 9 1 289 53 383 3.33e-52 182
MS.gene000840.t1 AT1G77850 30.341 323 176 5 10 289 61 377 2.75e-44 160
MS.gene000840.t1 AT1G77850 30.341 323 176 5 10 289 61 377 2.94e-44 159
MS.gene000840.t1 AT1G43950 40.506 158 89 2 4 161 70 222 5.60e-34 124
MS.gene000840.t1 AT2G36080 36.190 105 63 2 62 162 38 142 1.99e-11 62.4
MS.gene000840.t1 AT2G36080 36.190 105 63 2 62 162 38 142 1.99e-11 62.4
MS.gene000840.t1 AT1G01030 37.500 96 59 1 56 151 50 144 2.83e-11 63.9
MS.gene000840.t1 AT4G01500 37.778 90 53 2 62 151 36 122 3.19e-11 63.9
MS.gene000840.t1 AT1G01030 37.500 96 59 1 56 151 50 144 3.61e-11 63.9
MS.gene000840.t1 AT2G36080 36.190 105 63 2 62 162 38 142 6.04e-11 62.0
MS.gene000840.t1 AT5G06250 31.928 166 86 5 53 206 37 187 7.13e-11 62.4
MS.gene000840.t1 AT5G06250 31.737 167 87 5 53 207 37 188 7.33e-11 62.0
MS.gene000840.t1 AT1G25560 35.965 114 65 2 44 150 178 290 7.89e-11 62.8
MS.gene000840.t1 AT5G06250 31.928 166 86 5 53 206 37 187 7.97e-11 62.0
MS.gene000840.t1 AT2G36080 36.190 105 63 2 62 162 38 142 9.01e-11 61.6

Find 73 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACATTATGATCACCTTCT+TGG 0.264286 8.2:+55671837 None:intergenic
GGACAAACCCTCTCGATATT+TGG 0.269772 8.2:+55671181 None:intergenic
AGTTGTGGGTGTTCAATTAA+AGG 0.274617 8.2:-55674571 MS.gene000840:intron
TTAGAAGGCAAATGATAGTT+AGG 0.299166 8.2:+55674606 None:intergenic
CTAAAAGAGCAGATTTCATT+AGG 0.304072 8.2:+55674053 None:intergenic
AGGGGAGAGAATGGTGAAAT+TGG 0.305389 8.2:-55672256 MS.gene000840:CDS
GTTGTCCATGCTGTTTCTAT+TGG 0.311077 8.2:-55672133 MS.gene000840:CDS
TCCATGGTGGATTGAGCCTT+TGG 0.330320 8.2:-55671161 MS.gene000840:CDS
GAGAATGGTGAAATTGGTAT+TGG 0.352900 8.2:-55672250 MS.gene000840:CDS
CATCTATCTGCATGTTGCTT+TGG 0.355107 8.2:+55673981 None:intergenic
AGATAGATGCTTTCCCCATC+TGG 0.359903 8.2:-55673967 MS.gene000840:intron
TTCTGAACCAGGCCACCTAA+TGG 0.364231 8.2:+55671349 None:intergenic
CCATGGTGGATTGAGCCTTT+GGG 0.374994 8.2:-55671160 MS.gene000840:CDS
TTATTTGATAAAGGGAGAAT+TGG 0.387439 8.2:+55671109 None:intergenic
TAGTAAGTTGCTCACTTCAA+TGG 0.390845 8.2:-55674033 MS.gene000840:CDS
GCAACAAGAATATGCATTAG+AGG 0.392171 8.2:-55674096 MS.gene000840:CDS
CATCTTCTCTTAGGTGCAAT+GGG 0.393483 8.2:-55671212 MS.gene000840:intron
AGAATGGTGAAATTGGTATT+GGG 0.394064 8.2:-55672249 MS.gene000840:CDS
TATAGGTATGGTACAATAGT+TGG 0.409092 8.2:-55671389 MS.gene000840:intron
AATGCCCTTCAACATAATCT+TGG 0.411071 8.2:+55671132 None:intergenic
GAGGACAATCATGCACTTCA+TGG 0.415546 8.2:-55674077 MS.gene000840:CDS
GATCTTGCATTGGTGGTTGA+AGG 0.416950 8.2:+55673419 None:intergenic
TATCTCACCAAGGGTGGTAT+TGG 0.417596 8.2:+55672095 None:intergenic
GCCACTAGATCTTGCATTGG+TGG 0.421362 8.2:+55673412 None:intergenic
TCTGAACCAGGCCACCTAAT+GGG 0.429682 8.2:+55671350 None:intergenic
CAGAGGAATCATAAATTCAA+AGG 0.441039 8.2:+55671938 None:intergenic
AGAGCACACTTGCTTACTAA+TGG 0.459202 8.2:-55672519 MS.gene000840:CDS
AACTGAGTAGTCTTTCTCAA+TGG 0.461873 8.2:+55671899 None:intergenic
ACATCTTCTCTTAGGTGCAA+TGG 0.470200 8.2:-55671213 MS.gene000840:intron
CGTTATTGTAGGGGAGAGAA+TGG 0.473197 8.2:-55672265 MS.gene000840:intron
ATTGATCCCATTAGGTGGCC+TGG 0.478400 8.2:-55671356 MS.gene000840:CDS
ATGAAGATATTGATCCCATT+AGG 0.481523 8.2:-55671364 MS.gene000840:CDS
ATGCCCTTCAACATAATCTT+GGG 0.482861 8.2:+55671133 None:intergenic
CACACTTGCTTACTAATGGT+TGG 0.485940 8.2:-55672515 MS.gene000840:CDS
ATCTCCCAAGATTATGTTGA+AGG 0.486743 8.2:-55671137 MS.gene000840:CDS
AGAGGAATCATAAATTCAAA+GGG 0.491970 8.2:+55671939 None:intergenic
AAACATTCAACTTGGAGCAT+TGG 0.497605 8.2:-55672161 MS.gene000840:CDS
TGCATGAATCTCCAGGAAGA+AGG 0.528511 8.2:+55672469 None:intergenic
AGGACATGCATGGAATTGAA+TGG 0.531700 8.2:-55673387 MS.gene000840:CDS
TCCATGTCCAATACCACCCT+TGG 0.536464 8.2:-55672102 MS.gene000840:intron
ATCTTGCATTGGTGGTTGAA+GGG 0.538894 8.2:+55673420 None:intergenic
TCAAGTCAAAACATTCAACT+TGG 0.553845 8.2:-55672169 MS.gene000840:CDS
ATTGAGAAAGACTACTCAGT+TGG 0.556162 8.2:-55671897 MS.gene000840:CDS
TAAACTAAAACAAACCAGAT+GGG 0.562205 8.2:+55673953 None:intergenic
TTCGCCACTAGATCTTGCAT+TGG 0.562318 8.2:+55673409 None:intergenic
ATACATCTCCATTCTGAACC+AGG 0.563789 8.2:+55671338 None:intergenic
TTCAGAATGGAGATGTATCA+AGG 0.571681 8.2:-55671333 MS.gene000840:intron
TACATTATTTCCATTGCTCG+AGG 0.574951 8.2:-55674425 MS.gene000840:intron
AAATAACTAACCTCGAGCAA+TGG 0.576524 8.2:+55674415 None:intergenic
TTAGGTGGCCTGGTTCAGAA+TGG 0.591720 8.2:-55671346 MS.gene000840:CDS
ATATCGAGAGGGTTTGTCCA+TGG 0.594667 8.2:-55671177 MS.gene000840:CDS
AGACTACTCAGTTGGAAGGA+GGG 0.596500 8.2:-55671889 MS.gene000840:CDS
ACCAAGGGTGGTATTGGACA+TGG 0.602110 8.2:+55672101 None:intergenic
AAGACTACTCAGTTGGAAGG+AGG 0.602756 8.2:-55671890 MS.gene000840:CDS
AGAAAGACTACTCAGTTGGA+AGG 0.604367 8.2:-55671893 MS.gene000840:CDS
AAACCCTCTCGATATTTGGT+AGG 0.605132 8.2:+55671185 None:intergenic
AATGCAAGATCTAGTGGCGA+AGG 0.612003 8.2:-55673407 MS.gene000840:CDS
TCGAGAGGGTTTGTCCATGG+TGG 0.612707 8.2:-55671174 MS.gene000840:CDS
AACTTCCAATAGAAACAGCA+TGG 0.614686 8.2:+55672128 None:intergenic
ACCACCAATGCAAGATCTAG+TGG 0.615505 8.2:-55673413 MS.gene000840:CDS
CATTGGTATCTCACCAAGGG+TGG 0.616532 8.2:+55672089 None:intergenic
TTTCCTACCAAATATCGAGA+GGG 0.620806 8.2:-55671188 MS.gene000840:CDS
AAGTTGAAGGATGTCCAAGA+AGG 0.624899 8.2:-55671851 MS.gene000840:intron
TCTCCCAAGATTATGTTGAA+GGG 0.629441 8.2:-55671136 MS.gene000840:CDS
AAACTAAAACAAACCAGATG+GGG 0.640336 8.2:+55673954 None:intergenic
AAGATATTGATCCCATTAGG+TGG 0.658591 8.2:-55671361 MS.gene000840:CDS
ATTTCCTACCAAATATCGAG+AGG 0.660470 8.2:-55671189 MS.gene000840:CDS
CCCAAAGGCTCAATCCACCA+TGG 0.661329 8.2:+55671160 None:intergenic
ATAATCTTGGGAGATCCCAA+AGG 0.675503 8.2:+55671145 None:intergenic
TCAATGGAAACAAGTACACA+TGG 0.685853 8.2:-55674017 MS.gene000840:CDS
CAGATGTTGTCTGAAGTTGA+AGG 0.687407 8.2:-55671864 MS.gene000840:CDS
CTAGTGGCGAAGGACATGCA+TGG 0.702589 8.2:-55673397 MS.gene000840:CDS
ATGGAAACAAGTACACATGG+TGG 0.710626 8.2:-55674014 MS.gene000840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATTTAATTAAAATTA+TGG + chr8.2:55671496-55671515 None:intergenic 0.0%
!! AAAATGAATAATAATGTTAT+TGG + chr8.2:55673359-55673378 None:intergenic 10.0%
!! ACAAAAAATTGTAATTATAT+AGG + chr8.2:55671902-55671921 None:intergenic 10.0%
!! ATTTATTAAATAAAACATCA+TGG + chr8.2:55674420-55674439 None:intergenic 10.0%
!! CAAAAAATTGTAATTATATA+GGG + chr8.2:55671901-55671920 None:intergenic 10.0%
!! GTTATAATTAAATAACTTAA+AGG - chr8.2:55672945-55672964 MS.gene000840:intron 10.0%
!! TTGTAAATAATATACTTATT+TGG - chr8.2:55671199-55671218 MS.gene000840:CDS 10.0%
!! TTTATTAAATAAAACATCAT+GGG + chr8.2:55674419-55674438 None:intergenic 10.0%
!!! AAAAAATAAATGACAATTTT+TGG + chr8.2:55672199-55672218 None:intergenic 10.0%
!!! AAATAAAATAGTTGTATTTT+GGG + chr8.2:55673076-55673095 None:intergenic 10.0%
! CGGGGGGGGGGGGGGGGGGG+GGG - chr8.2:55672709-55672728 MS.gene000840:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8.2:55672710-55672729 MS.gene000840:intron 100.0%
!! AAAAAAGGAAAAACAAAATA+TGG + chr8.2:55672777-55672796 None:intergenic 15.0%
!! ATATACAATAACATTATCAA+AGG + chr8.2:55671782-55671801 None:intergenic 15.0%
!! ATTTCAAATTGTAAAATCAT+TGG + chr8.2:55673621-55673640 None:intergenic 15.0%
!! CAAAAATCATAAATTCTATA+CGG - chr8.2:55672097-55672116 MS.gene000840:intron 15.0%
!! GTATTTACTAAAATTCATAT+GGG + chr8.2:55674131-55674150 None:intergenic 15.0%
!! TGTATTTACTAAAATTCATA+TGG + chr8.2:55674132-55674151 None:intergenic 15.0%
!! TTGTTTCATATAAATAGAAA+GGG - chr8.2:55672452-55672471 MS.gene000840:intron 15.0%
!! TTTGTTTCATATAAATAGAA+AGG - chr8.2:55672451-55672470 MS.gene000840:intron 15.0%
!!! ACATTTTTGTTTTACTTTAT+AGG - chr8.2:55674284-55674303 MS.gene000840:intron 15.0%
!!! ATAGAATTTATGATTTTTGA+TGG + chr8.2:55672096-55672115 None:intergenic 15.0%
!!! ATATCTGTTTTATTTGATAA+AGG + chr8.2:55674593-55674612 None:intergenic 15.0%
!!! ATGAATTTTAGTAAATACAA+AGG - chr8.2:55674133-55674152 MS.gene000840:intron 15.0%
!!! GAAATAAAATAGTTGTATTT+TGG + chr8.2:55673077-55673096 None:intergenic 15.0%
!!! TATCTGTTTTATTTGATAAA+GGG + chr8.2:55674592-55674611 None:intergenic 15.0%
!! AAAACTTAAAACGACTTAAT+TGG - chr8.2:55672550-55672569 MS.gene000840:intron 20.0%
!! AAAGTGCAAAAAAACTTAAA+AGG - chr8.2:55672914-55672933 MS.gene000840:intron 20.0%
!! AAATATGGAAAACAAAAGTT+AGG + chr8.2:55672762-55672781 None:intergenic 20.0%
!! ATATACTTATTTGGTATTGT+AGG - chr8.2:55671208-55671227 MS.gene000840:intron 20.0%
!! ATCATAATGTCAAATTACTA+TGG - chr8.2:55673864-55673883 MS.gene000840:intron 20.0%
!! ATTTAATTACATCTTCTCTT+AGG - chr8.2:55674469-55674488 MS.gene000840:intron 20.0%
!! TAAATTCATAAAAATATGCG+AGG + chr8.2:55671957-55671976 None:intergenic 20.0%
!! TAATTACCTTTATAGACTAT+AGG + chr8.2:55674242-55674261 None:intergenic 20.0%
!! TACCAAAAAAAAAAACCATT+GGG - chr8.2:55672632-55672651 MS.gene000840:intron 20.0%
!! TGTTTCATATAAATAGAAAG+GGG - chr8.2:55672453-55672472 MS.gene000840:intron 20.0%
!! TTTATTTCATTGTATTCCAT+GGG - chr8.2:55673276-55673295 MS.gene000840:intron 20.0%
!!! AATATAATTTGGGTTATTAC+TGG - chr8.2:55671562-55671581 MS.gene000840:intron 20.0%
!!! AATTTATGATTTTTGATGGT+TGG + chr8.2:55672092-55672111 None:intergenic 20.0%
!!! ATAAGCAAAAATCAACATTT+TGG + chr8.2:55674046-55674065 None:intergenic 20.0%
!!! ATACTTAACTTTTTTAACGA+GGG - chr8.2:55674611-55674630 MS.gene000840:CDS 20.0%
!!! CAACTATTTTATTTCAAGAA+TGG - chr8.2:55673082-55673101 MS.gene000840:intron 20.0%
!!! GTCGTTTTTATAAAAAAGTA+TGG + chr8.2:55671381-55671400 None:intergenic 20.0%
!!! TATACTTAACTTTTTTAACG+AGG - chr8.2:55674610-55674629 MS.gene000840:CDS 20.0%
!!! TATTCTCTGAAGAAATTTAA+AGG + chr8.2:55672989-55673008 None:intergenic 20.0%
!!! TTTGTTTTACTTTATAGGTA+TGG - chr8.2:55674289-55674308 MS.gene000840:intron 20.0%
!!! TTTTATTTCATTGTATTCCA+TGG - chr8.2:55673275-55673294 MS.gene000840:intron 20.0%
! AATTAACTTAAAGACCTAAG+TGG - chr8.2:55672609-55672628 MS.gene000840:intron 25.0%
! AGAAAAAAAACATGGAGAAT+GGG + chr8.2:55673049-55673068 None:intergenic 25.0%
! AGAGGAATCATAAATTCAAA+GGG + chr8.2:55673754-55673773 None:intergenic 25.0%
! AGTCCTTATAAAGCAAAATA+AGG - chr8.2:55672037-55672056 MS.gene000840:intron 25.0%
! ATAAACTAAAACAAACCAGA+TGG + chr8.2:55671741-55671760 None:intergenic 25.0%
! ATCATACCTATAGTCTATAA+AGG - chr8.2:55674233-55674252 MS.gene000840:intron 25.0%
! CATTCATTTAATGATGTACA+TGG + chr8.2:55674020-55674039 None:intergenic 25.0%
! GTACCAAAAAAAAAAACCAT+TGG - chr8.2:55672631-55672650 MS.gene000840:intron 25.0%
! GTTTCATATAAATAGAAAGG+GGG - chr8.2:55672454-55672473 MS.gene000840:intron 25.0%
! TAAACTAAAACAAACCAGAT+GGG + chr8.2:55671740-55671759 None:intergenic 25.0%
! TAAAGGCTAAATTACATCAA+AGG + chr8.2:55672972-55672991 None:intergenic 25.0%
! TAGATAGATACATACATTCA+TGG + chr8.2:55672157-55672176 None:intergenic 25.0%
! TGTCTTTGTTACATTGTTAT+AGG - chr8.2:55672241-55672260 MS.gene000840:CDS 25.0%
! TTAAAACGACTTAATTGGTA+TGG - chr8.2:55672555-55672574 MS.gene000840:intron 25.0%
! TTATGTCATAGAAATTTACG+TGG - chr8.2:55673392-55673411 MS.gene000840:CDS 25.0%
! TTATTTGATAAAGGGAGAAT+TGG + chr8.2:55674584-55674603 None:intergenic 25.0%
! TTTCATATAAATAGAAAGGG+GGG - chr8.2:55672455-55672474 MS.gene000840:intron 25.0%
!! AAAATTTTATGCGTAGTTGT+GGG - chr8.2:55671105-55671124 MS.gene000840:CDS 25.0%
!! AAATGAATTTTTGAATCCCA+TGG + chr8.2:55673295-55673314 None:intergenic 25.0%
!! AATTTTCGACATATTTATCG+TGG - chr8.2:55672326-55672345 MS.gene000840:intron 25.0%
!! ACTACGCATAAAATTTTAGA+AGG + chr8.2:55671102-55671121 None:intergenic 25.0%
!! TAAAATTTTATGCGTAGTTG+TGG - chr8.2:55671104-55671123 MS.gene000840:CDS 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - chr8.2:55674055-55674074 MS.gene000840:CDS 25.0%
!!! AATTTTAATCTCTCTCAGTA+GGG - chr8.2:55671402-55671421 MS.gene000840:intron 25.0%
!!! ATATATATATAATGGGTGAG+AGG - chr8.2:55672801-55672820 MS.gene000840:intron 25.0%
!!! CATCCTTATTTTGCTTTATA+AGG + chr8.2:55672043-55672062 None:intergenic 25.0%
!!! TAATTTTAATCTCTCTCAGT+AGG - chr8.2:55671401-55671420 MS.gene000840:intron 25.0%
!!! TTTTTTTTTTGGTACCACTT+AGG + chr8.2:55672626-55672645 None:intergenic 25.0%
AAAAAAAAAAACCATTGGGC+TGG - chr8.2:55672636-55672655 MS.gene000840:intron 30.0%
AAAAGTTAGGTAACCCATAA+CGG + chr8.2:55672749-55672768 None:intergenic 30.0%
AAAATTTATGCTACACCATC+CGG + chr8.2:55674077-55674096 None:intergenic 30.0%
AAACTAAAACAAACCAGATG+GGG + chr8.2:55671739-55671758 None:intergenic 30.0%
AATACACACATACACAATGA+AGG + chr8.2:55671853-55671872 None:intergenic 30.0%
ACAATTCTTGCGTTATTGTA+GGG - chr8.2:55673415-55673434 MS.gene000840:CDS 30.0%
ACATCTTGAATTCATCTCTA+GGG - chr8.2:55672120-55672139 MS.gene000840:CDS 30.0%
AGAATGGTGAAATTGGTATT+GGG - chr8.2:55673441-55673460 MS.gene000840:intron 30.0%
ATGAAGATATTGATCCCATT+AGG - chr8.2:55674326-55674345 MS.gene000840:intron 30.0%
CAGAGGAATCATAAATTCAA+AGG + chr8.2:55673755-55673774 None:intergenic 30.0%
CTAAAAGAGCAGATTTCATT+AGG + chr8.2:55671640-55671659 None:intergenic 30.0%
GAGAAAAAAAACATGGAGAA+TGG + chr8.2:55673050-55673069 None:intergenic 30.0%
GTGTATGTGTGTATTATACA+AGG - chr8.2:55671858-55671877 MS.gene000840:CDS 30.0%
TATAGGTATGGTACAATAGT+TGG - chr8.2:55674301-55674320 MS.gene000840:intron 30.0%
TCAAGTCAAAACATTCAACT+TGG - chr8.2:55673521-55673540 MS.gene000840:intron 30.0%
TGCATGACAAGTAGTTATAT+AGG + chr8.2:55672421-55672440 None:intergenic 30.0%
TTAGAAGGCAAATGATAGTT+AGG + chr8.2:55671087-55671106 None:intergenic 30.0%
! CACTAATACACATCTTTTGT+AGG - chr8.2:55673722-55673741 MS.gene000840:intron 30.0%
! GAGGTTAGTTATTTCGAATT+TGG - chr8.2:55671284-55671303 MS.gene000840:intron 30.0%
! GGTCAATCATAAACTCTTTT+AGG + chr8.2:55672400-55672419 None:intergenic 30.0%
! GTTAGTTATTTCGAATTTGG+TGG - chr8.2:55671287-55671306 MS.gene000840:intron 30.0%
! TTTTAAACTCTCGTAGACAT+TGG + chr8.2:55672534-55672553 None:intergenic 30.0%
!!! AGCCCAATGGTTTTTTTTTT+TGG + chr8.2:55672637-55672656 None:intergenic 30.0%
!!! TTTTGACTTGATGATAGTTG+AGG + chr8.2:55673512-55673531 None:intergenic 30.0%
AAACATTCAACTTGGAGCAT+TGG - chr8.2:55673529-55673548 MS.gene000840:intron 35.0%
AAATAACTAACCTCGAGCAA+TGG + chr8.2:55671278-55671297 None:intergenic 35.0%
AAATCATTGGTATCTCACCA+AGG + chr8.2:55673608-55673627 None:intergenic 35.0%
AACTGAGTAGTCTTTCTCAA+TGG + chr8.2:55673794-55673813 None:intergenic 35.0%
AACTTCCAATAGAAACAGCA+TGG + chr8.2:55673565-55673584 None:intergenic 35.0%
AAGATATTGATCCCATTAGG+TGG - chr8.2:55674329-55674348 MS.gene000840:intron 35.0%
AATCATTGGTATCTCACCAA+GGG + chr8.2:55673607-55673626 None:intergenic 35.0%
AATGCCCTTCAACATAATCT+TGG + chr8.2:55674561-55674580 None:intergenic 35.0%
ACAAAAATGCATGAATCTCC+AGG + chr8.2:55673231-55673250 None:intergenic 35.0%
AGTTGTGGGTGTTCAATTAA+AGG - chr8.2:55671119-55671138 MS.gene000840:CDS 35.0%
ATCTCCCAAGATTATGTTGA+AGG - chr8.2:55674553-55674572 MS.gene000840:intron 35.0%
ATGCCCTTCAACATAATCTT+GGG + chr8.2:55674560-55674579 None:intergenic 35.0%
ATTGAGAAAGACTACTCAGT+TGG - chr8.2:55673793-55673812 MS.gene000840:intron 35.0%
ATTTCCTACCAAATATCGAG+AGG - chr8.2:55674501-55674520 MS.gene000840:intron 35.0%
CAATTCTTGCGTTATTGTAG+GGG - chr8.2:55673416-55673435 MS.gene000840:CDS 35.0%
GACAATTCTTGCGTTATTGT+AGG - chr8.2:55673414-55673433 MS.gene000840:CDS 35.0%
GACATCTTGAATTCATCTCT+AGG - chr8.2:55672119-55672138 MS.gene000840:CDS 35.0%
GAGAATGGTGAAATTGGTAT+TGG - chr8.2:55673440-55673459 MS.gene000840:intron 35.0%
GCAACAAGAATATGCATTAG+AGG - chr8.2:55671594-55671613 MS.gene000840:intron 35.0%
TACATTATTTCCATTGCTCG+AGG - chr8.2:55671265-55671284 MS.gene000840:intron 35.0%
TAGTAAGTTGCTCACTTCAA+TGG - chr8.2:55671657-55671676 MS.gene000840:intron 35.0%
TCAATGGAAACAAGTACACA+TGG - chr8.2:55671673-55671692 MS.gene000840:intron 35.0%
TCTCCCAAGATTATGTTGAA+GGG - chr8.2:55674554-55674573 MS.gene000840:intron 35.0%
TGACATTATGATCACCTTCT+TGG + chr8.2:55673856-55673875 None:intergenic 35.0%
TGCTTATAATAGTGACCAGA+TGG + chr8.2:55673942-55673961 None:intergenic 35.0%
TGGGAGAGAGAAAAAAAACA+TGG + chr8.2:55673057-55673076 None:intergenic 35.0%
TTCAGAATGGAGATGTATCA+AGG - chr8.2:55674357-55674376 MS.gene000840:intron 35.0%
TTTCCTACCAAATATCGAGA+GGG - chr8.2:55674502-55674521 MS.gene000840:intron 35.0%
TTTCTTCTGAATCAAGAGTG+AGG + chr8.2:55672892-55672911 None:intergenic 35.0%
! AACGTATGCCTGATTTTGTT+CGG - chr8.2:55672689-55672708 MS.gene000840:intron 35.0%
! AACTCTAAAAACCTTCTTCC+TGG - chr8.2:55673210-55673229 MS.gene000840:intron 35.0%
! GAGATTCATGCATTTTTGTC+AGG - chr8.2:55673232-55673251 MS.gene000840:intron 35.0%
! GAGGCAATTTTGTGCATATA+TGG + chr8.2:55673493-55673512 None:intergenic 35.0%
AAACCCTCTCGATATTTGGT+AGG + chr8.2:55674508-55674527 None:intergenic 40.0%
AAGTTGAAGGATGTCCAAGA+AGG - chr8.2:55673839-55673858 MS.gene000840:intron 40.0%
ACATCTTCTCTTAGGTGCAA+TGG - chr8.2:55674477-55674496 MS.gene000840:intron 40.0%
AGAAAGACTACTCAGTTGGA+AGG - chr8.2:55673797-55673816 MS.gene000840:intron 40.0%
AGAGCACACTTGCTTACTAA+TGG - chr8.2:55673171-55673190 MS.gene000840:intron 40.0%
AGGACATGCATGGAATTGAA+TGG - chr8.2:55672303-55672322 MS.gene000840:intron 40.0%
ATAATCTTGGGAGATCCCAA+AGG + chr8.2:55674548-55674567 None:intergenic 40.0%
ATACATCTCCATTCTGAACC+AGG + chr8.2:55674355-55674374 None:intergenic 40.0%
ATGGAAACAAGTACACATGG+TGG - chr8.2:55671676-55671695 MS.gene000840:intron 40.0%
CACACTTGCTTACTAATGGT+TGG - chr8.2:55673175-55673194 MS.gene000840:intron 40.0%
CATCTTCTCTTAGGTGCAAT+GGG - chr8.2:55674478-55674497 MS.gene000840:intron 40.0%
CGAACAATATACACACCATC+TGG - chr8.2:55673924-55673943 MS.gene000840:intron 40.0%
TGCTTATAATAGTGACCGGA+TGG - chr8.2:55674059-55674078 MS.gene000840:CDS 40.0%
! ACGTATGCCTGATTTTGTTC+GGG - chr8.2:55672690-55672709 MS.gene000840:intron 40.0%
! ATCTTGCATTGGTGGTTGAA+GGG + chr8.2:55672273-55672292 None:intergenic 40.0%
! CAGATGTTGTCTGAAGTTGA+AGG - chr8.2:55673826-55673845 MS.gene000840:intron 40.0%
! CATCTATCTGCATGTTGCTT+TGG + chr8.2:55671712-55671731 None:intergenic 40.0%
! GACTCAGCATAAGTTTTCAG+AGG + chr8.2:55673772-55673791 None:intergenic 40.0%
!! GTTGTCCATGCTGTTTCTAT+TGG - chr8.2:55673557-55673576 MS.gene000840:intron 40.0%
!! TTAGGGTTGATGGTATGGTT+TGG - chr8.2:55672482-55672501 MS.gene000840:CDS 40.0%
!!! AATAGAAAGGGGGGTGTTTT+AGG - chr8.2:55672464-55672483 MS.gene000840:CDS 40.0%
!!! ATAGAAAGGGGGGTGTTTTA+GGG - chr8.2:55672465-55672484 MS.gene000840:CDS 40.0%
!!! GTGTTTTAGGGTTGATGGTA+TGG - chr8.2:55672477-55672496 MS.gene000840:CDS 40.0%
AACCATCTTCAGACACGGTT+TGG - chr8.2:55672662-55672681 MS.gene000840:intron 45.0%
AAGACTACTCAGTTGGAAGG+AGG - chr8.2:55673800-55673819 MS.gene000840:intron 45.0%
AATGCAAGATCTAGTGGCGA+AGG - chr8.2:55672283-55672302 MS.gene000840:intron 45.0%
ACCACCAATGCAAGATCTAG+TGG - chr8.2:55672277-55672296 MS.gene000840:intron 45.0%
AGACTACTCAGTTGGAAGGA+GGG - chr8.2:55673801-55673820 MS.gene000840:intron 45.0%
AGATAGATGCTTTCCCCATC+TGG - chr8.2:55671723-55671742 MS.gene000840:intron 45.0%
AGGGGAGAGAATGGTGAAAT+TGG - chr8.2:55673434-55673453 MS.gene000840:intron 45.0%
ATATCGAGAGGGTTTGTCCA+TGG - chr8.2:55674513-55674532 MS.gene000840:intron 45.0%
CGTTATTGTAGGGGAGAGAA+TGG - chr8.2:55673425-55673444 MS.gene000840:CDS 45.0%
GAGGACAATCATGCACTTCA+TGG - chr8.2:55671613-55671632 MS.gene000840:intron 45.0%
GGACAAACCCTCTCGATATT+TGG + chr8.2:55674512-55674531 None:intergenic 45.0%
GGTCTAACCATCTTCAGACA+CGG - chr8.2:55672657-55672676 MS.gene000840:intron 45.0%
TATCTCACCAAGGGTGGTAT+TGG + chr8.2:55673598-55673617 None:intergenic 45.0%
TGCATGAATCTCCAGGAAGA+AGG + chr8.2:55673224-55673243 None:intergenic 45.0%
TTCGCCACTAGATCTTGCAT+TGG + chr8.2:55672284-55672303 None:intergenic 45.0%
! CGTATGCCTGATTTTGTTCG+GGG - chr8.2:55672691-55672710 MS.gene000840:intron 45.0%
! GATCTTGCATTGGTGGTTGA+AGG + chr8.2:55672274-55672293 None:intergenic 45.0%
! GTATGCCTGATTTTGTTCGG+GGG - chr8.2:55672692-55672711 MS.gene000840:intron 45.0%
! TATGCCTGATTTTGTTCGGG+GGG - chr8.2:55672693-55672712 MS.gene000840:intron 45.0%
!! ATATAATGGGTGAGAGGCAG+AGG - chr8.2:55672807-55672826 MS.gene000840:intron 45.0%
!! ATCTTCAGACACGGTTTGGT+GGG - chr8.2:55672666-55672685 MS.gene000840:intron 45.0%
!! AAAAAAATTGAATATAATTT+GGG - chr8.2:55671552-55671571 MS.gene000840:intron 5.0%
!! TAAAAAAATTGAATATAATT+TGG - chr8.2:55671551-55671570 MS.gene000840:intron 5.0%
!! TATATATATATATAGAAAAA+AGG + chr8.2:55672792-55672811 None:intergenic 5.0%
!! TTTCTATATATATATATAAT+GGG - chr8.2:55672794-55672813 MS.gene000840:intron 5.0%
!!! TTTTCTATATATATATATAA+TGG - chr8.2:55672793-55672812 MS.gene000840:intron 5.0%
AGATGGTTAGACCAGCCCAA+TGG + chr8.2:55672650-55672669 None:intergenic 50.0%
ATTGATCCCATTAGGTGGCC+TGG - chr8.2:55674334-55674353 MS.gene000840:intron 50.0%
CACCAAACCGTGTCTGAAGA+TGG + chr8.2:55672667-55672686 None:intergenic 50.0%
CATTGGTATCTCACCAAGGG+TGG + chr8.2:55673604-55673623 None:intergenic 50.0%
GACCTAGTCAGGATGTCCAA+CGG - chr8.2:55672852-55672871 MS.gene000840:intron 50.0%
GCCACTAGATCTTGCATTGG+TGG + chr8.2:55672281-55672300 None:intergenic 50.0%
GGAAGACATCAAAGAGCCGT+TGG + chr8.2:55672871-55672890 None:intergenic 50.0%
GTTGGACATCCTGACTAGGT+CGG + chr8.2:55672853-55672872 None:intergenic 50.0%
TCCATGTCCAATACCACCCT+TGG - chr8.2:55673588-55673607 MS.gene000840:intron 50.0%
TCTGAACCAGGCCACCTAAT+GGG + chr8.2:55674343-55674362 None:intergenic 50.0%
TTAGGTGGCCTGGTTCAGAA+TGG - chr8.2:55674344-55674363 MS.gene000840:intron 50.0%
TTCTGAACCAGGCCACCTAA+TGG + chr8.2:55674344-55674363 None:intergenic 50.0%
! ACCAAGGGTGGTATTGGACA+TGG + chr8.2:55673592-55673611 None:intergenic 50.0%
! AGAGGATTTGAGTTCCCTGG+AGG - chr8.2:55672825-55672844 MS.gene000840:intron 50.0%
! ATGCCTGATTTTGTTCGGGG+GGG - chr8.2:55672694-55672713 MS.gene000840:intron 50.0%
! CATCTTCAGACACGGTTTGG+TGG - chr8.2:55672665-55672684 MS.gene000840:intron 50.0%
!! CCATGGTGGATTGAGCCTTT+GGG - chr8.2:55674530-55674549 MS.gene000840:intron 50.0%
!! TCCATGGTGGATTGAGCCTT+TGG - chr8.2:55674529-55674548 MS.gene000840:intron 50.0%
AGCCGTTGGACATCCTGACT+AGG + chr8.2:55672857-55672876 None:intergenic 55.0%
CCCAAAGGCTCAATCCACCA+TGG + chr8.2:55674533-55674552 None:intergenic 55.0%
CTAGTGGCGAAGGACATGCA+TGG - chr8.2:55672293-55672312 MS.gene000840:intron 55.0%
GGGGGTTTAGGGACCGTTAT+GGG - chr8.2:55672733-55672752 MS.gene000840:intron 55.0%
TCGAGAGGGTTTGTCCATGG+TGG - chr8.2:55674516-55674535 MS.gene000840:intron 55.0%
! GGCAGAGGATTTGAGTTCCC+TGG - chr8.2:55672822-55672841 MS.gene000840:intron 55.0%
! TGCCTGATTTTGTTCGGGGG+GGG - chr8.2:55672695-55672714 MS.gene000840:intron 55.0%
!!! GGGGGGTGTTTTAGGGTTGA+TGG - chr8.2:55672472-55672491 MS.gene000840:CDS 55.0%
GGGGGGTTTAGGGACCGTTA+TGG - chr8.2:55672732-55672751 MS.gene000840:intron 60.0%
TGACTAGGTCGGCACCTCCA+GGG + chr8.2:55672842-55672861 None:intergenic 60.0%
! CCTGATTTTGTTCGGGGGGG+GGG - chr8.2:55672697-55672716 MS.gene000840:intron 60.0%
! CTGATTTTGTTCGGGGGGGG+GGG - chr8.2:55672698-55672717 MS.gene000840:intron 60.0%
! GCCTGATTTTGTTCGGGGGG+GGG - chr8.2:55672696-55672715 MS.gene000840:intron 60.0%
! TGATTTTGTTCGGGGGGGGG+GGG - chr8.2:55672699-55672718 MS.gene000840:intron 60.0%
CCCCCCCCCCGAACAAAATC+AGG + chr8.2:55672700-55672719 None:intergenic 65.0%
CTGACTAGGTCGGCACCTCC+AGG + chr8.2:55672843-55672862 None:intergenic 65.0%
! ATTTTGTTCGGGGGGGGGGG+GGG - chr8.2:55672701-55672720 MS.gene000840:intron 65.0%
! GATTTTGTTCGGGGGGGGGG+GGG - chr8.2:55672700-55672719 MS.gene000840:intron 65.0%
!! CTGGAGGTGCCGACCTAGTC+AGG - chr8.2:55672841-55672860 MS.gene000840:intron 65.0%
! TTTTGTTCGGGGGGGGGGGG+GGG - chr8.2:55672702-55672721 MS.gene000840:intron 70.0%
TTTGTTCGGGGGGGGGGGGG+GGG - chr8.2:55672703-55672722 MS.gene000840:intron 75.0%
! GGGGGGGGGGGGGGGGTTTA+GGG - chr8.2:55672722-55672741 MS.gene000840:intron 80.0%
! TTGTTCGGGGGGGGGGGGGG+GGG - chr8.2:55672704-55672723 MS.gene000840:intron 80.0%
! GGGGGGGGGGGGGGGGGTTT+AGG - chr8.2:55672721-55672740 MS.gene000840:intron 85.0%
! TGTTCGGGGGGGGGGGGGGG+GGG - chr8.2:55672705-55672724 MS.gene000840:intron 85.0%
! GTTCGGGGGGGGGGGGGGGG+GGG - chr8.2:55672706-55672725 MS.gene000840:intron 90.0%
! TTCGGGGGGGGGGGGGGGGG+GGG - chr8.2:55672707-55672726 MS.gene000840:intron 90.0%
! TCGGGGGGGGGGGGGGGGGG+GGG - chr8.2:55672708-55672727 MS.gene000840:intron 95.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 55671075 55674637 55671075 ID=MS.gene000840
chr8.2 mRNA 55671075 55674637 55671075 ID=MS.gene000840.t1;Parent=MS.gene000840
chr8.2 exon 55674572 55674637 55674572 ID=MS.gene000840.t1.exon1;Parent=MS.gene000840.t1
chr8.2 CDS 55674572 55674637 55674572 ID=cds.MS.gene000840.t1;Parent=MS.gene000840.t1
chr8.2 exon 55674426 55674482 55674426 ID=MS.gene000840.t1.exon2;Parent=MS.gene000840.t1
chr8.2 CDS 55674426 55674482 55674426 ID=cds.MS.gene000840.t1;Parent=MS.gene000840.t1
chr8.2 exon 55673968 55674117 55673968 ID=MS.gene000840.t1.exon3;Parent=MS.gene000840.t1
chr8.2 CDS 55673968 55674117 55673968 ID=cds.MS.gene000840.t1;Parent=MS.gene000840.t1
chr8.2 exon 55673365 55673449 55673365 ID=MS.gene000840.t1.exon4;Parent=MS.gene000840.t1
chr8.2 CDS 55673365 55673449 55673365 ID=cds.MS.gene000840.t1;Parent=MS.gene000840.t1
chr8.2 exon 55672459 55672549 55672459 ID=MS.gene000840.t1.exon5;Parent=MS.gene000840.t1
chr8.2 CDS 55672459 55672549 55672459 ID=cds.MS.gene000840.t1;Parent=MS.gene000840.t1
chr8.2 exon 55672103 55672276 55672103 ID=MS.gene000840.t1.exon6;Parent=MS.gene000840.t1
chr8.2 CDS 55672103 55672276 55672103 ID=cds.MS.gene000840.t1;Parent=MS.gene000840.t1
chr8.2 exon 55671852 55671968 55671852 ID=MS.gene000840.t1.exon7;Parent=MS.gene000840.t1
chr8.2 CDS 55671852 55671968 55671852 ID=cds.MS.gene000840.t1;Parent=MS.gene000840.t1
chr8.2 exon 55671334 55671406 55671334 ID=MS.gene000840.t1.exon8;Parent=MS.gene000840.t1
chr8.2 CDS 55671334 55671406 55671334 ID=cds.MS.gene000840.t1;Parent=MS.gene000840.t1
chr8.2 exon 55671075 55671221 55671075 ID=MS.gene000840.t1.exon9;Parent=MS.gene000840.t1
chr8.2 CDS 55671075 55671221 55671075 ID=cds.MS.gene000840.t1;Parent=MS.gene000840.t1
Gene Sequence

>MS.gene000840

ATGGAAATTCCTAACTATCATTTGCCTTCTAAAATTTTATGCGTAGTTGTGGGTGTTCAATTAAAGGTATTGTCATCTTTCTATAAGTTTATTGTTTTTATTAACTTAAAATGTTTAATGCGTATTGTAAATAATATACTTATTTGGTATTGTAGGTAAAAGTTGACACAGATGAGATTTTTTCTCTAGTTACATTATTTCCATTGCTCGAGGTTAGTTATTTCGAATTTGGTGGTAAATATGTGTTTAGTGACTACTGATATTCTTTTTTTCACTATCTGAAATAAAACGTGAGATTTTAGTCCATACTTTTTTATAAAAACGACTAATTTTAATCTCTCTCAGTAGGGACTCAAAGCACATGTTTTATAGAATATATAATGACTCAAATTTTATGTAGAGACTCAATTTGAAAAATCCATAATTTTAATTAAATTAAAAACATTTAACTCTTCTAATATCGTGTGTGTAAAGATTAAAAAAATTGAATATAATTTGGGTTATTACTGGATGATTGCAGCAACAAGAATATGCATTAGAGGACAATCATGCACTTCATGGTCCTAATGAAATCTGCTCTTTTAGTAAGTTGCTCACTTCAATGGAAACAAGTACACATGGTGGACTTTATATTCCAAAGCAACATGCAGATAGATGCTTTCCCCATCTGGTTTGTTTTAGTTTATGCTTGTGATTCTTTATTGCCTTTGATAATGTTATTGTATATTTTCTTTGATTGAGATGACATAATTTTCGATTGTCAATGTCATTCTATCCTTCATTGTGTATGTGTGTATTATACAAGGTTAAATATATTTTTAGTCCCTATATAATTACAATTTTTTGTTAATACATGTATAAGTTTAATTCAAATTTTGTCCTCGCATATTTTTATGAATTTATACAAGAAAAATTATTTTAGTACTTGAAATTGTTTTCTTAAACAACAAATGTTAGTATTTAGTCCTTATAAAGCAAAATAAGGATGAAAGTTGTACAAACTTTATATCGAGACCAACCATCAAAAATCATAAATTCTATACGGACATCTTGAATTCATCTCTAGGGACATATTGAAACCATGAATGTATGTATCTATCTACACTTGTGTTATGTTTTTACCAAAAATTGTCATTTATTTTTTTAAGAATTTTGTTTTAGTTTCATGTCTTTGTTACATTGTTATAGGATATGACCCTTCAACCACCAATGCAAGATCTAGTGGCGAAGGACATGCATGGAATTGAATGGAATTTTCGACATATTTATCGTGGTAAGTTTAAGTTGTTTTATTTAAACATTAGTATTAACTTCATTGTTAACCTAAAAGAGTTTATGATTGACCTATATAACTACTTGTCATGCACAAAATCATCTTTGTTTCATATAAATAGAAAGGGGGGTGTTTTAGGGTTGATGGTATGGTTTGGTGATAATTGAGTCTCTCTAATGTTGTCCAATGTCTACGAGAGTTTAAAACTTAAAACGACTTAATTGGTATGGAAAAAACTTAAAGAACTAACTTGTTACAATTAATTAACTTAAAGACCTAAGTGGTACCAAAAAAAAAAACCATTGGGCTGGTCTAACCATCTTCAGACACGGTTTGGTGGGAACGTATGCCTGATTTTGTTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTAGGGACCGTTATGGGTTACCTAACTTTTGTTTTCCATATTTTGTTTTTCCTTTTTTCTATATATATATATAATGGGTGAGAGGCAGAGGATTTGAGTTCCCTGGAGGTGCCGACCTAGTCAGGATGTCCAACGGCTCTTTGATGTCTTCCTCACTCTTGATTCAGAAGAAAAAAAAGTGCAAAAAAACTTAAAAGGACAAATTTGTTATAATTAAATAACTTAAAGGACCTTTGATGTAATTTAGCCTTTAAATTTCTTCAGAGAATATTGTAAAATGATCGTAGTGTCACTGTAATAACAATTGCCCATTCTCCATGTTTTTTTTCTCTCTCCCAAAATACAACTATTTTATTTCAAGAATGGAATCATTATTTATTTATTTTTCTTTCTAAGTTATATATTCTTATAACATGAAATGCAGATGATGAGAGAGCACACTTGCTTACTAATGGTTGGAGCACATTTGTCAACTCTAAAAACCTTCTTCCTGGAGATTCATGCATTTTTGTCAGGTTCTCTCTTTTTTTCTTCATTTTTATTTCATTGTATTCCATGGGATTCAAAAATTCATTTCAATCTATAAATTCTCTTGTAATTGACAATTTACGCATCTACCAATAACATTATTATTCATTTTGTACACATTAATTTTATGTCATAGAAATTTACGTGGACAATTCTTGCGTTATTGTAGGGGAGAGAATGGTGAAATTGGTATTGGGATTCGTCGAGCAATGAATCAACATAGCCATATATGCACAAAATTGCCTCAACTATCATCAAGTCAAAACATTCAACTTGGAGCATTGGCTGCTGTTGTCCATGCTGTTTCTATTGGAAGTTTGTTCCATGTCCAATACCACCCTTGGTGAGATACCAATGATTTTACAATTTGAAATATTTATGAACATTTTTTTTTTTCAAGCAATGCAAATTTGTAAATATATGCTCTTTGAGAATCTGTTTTGAAAGAATGTTAGCACTAATACACATCTTTTGTAGGATTACTCCCTTTGAATTTATGATTCCTCTGAAAACTTATGCTGAGTCCATTGAGAAAGACTACTCAGTTGGAAGGAGGGTACAGATGTTGTCTGAAGTTGAAGGATGTCCAAGAAGGTGATCATAATGTCAAATTACTATGGTTGATTCATGATTGTTTTATCACTTTTATGAGAAGTGCGAACAATATACACACCATCTGGTCACTATTATAAGCAAAAAATAACATTTTAGATTCATTCATTTAATGATGTATTTAGTCTTTATTATAGACCATGTACATCATTAAATGAATGAATCCAAAATGTTGATTTTTGCTTATAATAGTGACCGGATGGTGTAGCATAAATTTTTCAATATTCGTCTTTCTGTTAGTCAATCACACCCATATGAATTTTAGTAAATACAAAGGCGTAATAAAAAAAGTGTATTGCTAGCATTTTTCGTATTTTGATTTGAAATATACGCGCATCTATGACAAAACTGTTTATCATACCTATAGTCTATAAAGGTAATTATTTGTAATAATTTTGTCTTTTTACATTTTTGTTTTACTTTATAGGTATGGTACAATAGTTGGTAATGAAGATATTGATCCCATTAGGTGGCCTGGTTCAGAATGGAGATGTATCAAGGTAAAATCAAATATCTTACTATGCTTTAGAATTAGTACCCATGATGTTTTATTTAATAAATTTTTCTTTTAACTTGATTAATTTAAATAAATTTAATTACATCTTCTCTTAGGTGCAATGGGATTTCCTACCAAATATCGAGAGGGTTTGTCCATGGTGGATTGAGCCTTTGGGATCTCCCAAGATTATGTTGAAGGGCATTCCAATTCTCCCTTTATCAAATAAAACAGATATACTTAACTTTTTTAACGAGGGTTAG
Protein sequence

>MS.gene000840.t1

MEIPNYHLPSKILCVVVGVQLKVKVDTDEIFSLVTLFPLLEQQEYALEDNHALHGPNEICSFSKLLTSMETSTHGGLYIPKQHADRCFPHLDMTLQPPMQDLVAKDMHGIEWNFRHIYRDDERAHLLTNGWSTFVNSKNLLPGDSCIFVRGENGEIGIGIRRAMNQHSHICTKLPQLSSSQNIQLGALAAVVHAVSIGSLFHVQYHPWITPFEFMIPLKTYAESIEKDYSVGRRVQMLSEVEGCPRRYGTIVGNEDIDPIRWPGSEWRCIKVQWDFLPNIERVCPWWIEPLGSPKIMLKGIPILPLSNKTDILNFFNEG