AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000887

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000887.t1 MTR_8g107280 88.136 59 7 0 307 365 167 225 1.54e-26 111
MS.gene000887.t1 MTR_8g107280 88.136 59 7 0 307 365 167 225 1.60e-26 110
MS.gene000887.t1 MTR_5g010730 72.881 59 14 1 236 292 483 541 2.53e-20 93.2
MS.gene000887.t1 MTR_5g010730 72.881 59 14 1 236 292 538 596 3.75e-20 92.4
MS.gene000887.t1 MTR_6g012380 66.667 87 29 0 52 138 94 180 1.27e-18 87.8
MS.gene000887.t1 MTR_1g082750 53.448 58 27 0 308 365 132 189 4.56e-14 73.6
MS.gene000887.t1 MTR_4g094205 57.407 54 23 0 308 361 178 231 3.53e-13 71.2
MS.gene000887.t1 MTR_1g016300 51.351 74 28 2 236 301 723 796 2.21e-12 68.9
MS.gene000887.t1 MTR_1g016300 51.351 74 28 2 236 301 723 796 2.63e-12 68.9
MS.gene000887.t1 MTR_4g122160 36.000 125 65 5 236 358 520 631 6.88e-12 67.4
MS.gene000887.t1 MTR_4g122160 36.000 125 65 5 236 358 520 631 6.92e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000887.t1 AT3G17970 62.712 59 22 0 307 365 162 220 3.28e-19 89.4
MS.gene000887.t1 AT3G17970 62.712 59 22 0 307 365 162 220 3.35e-19 89.7
MS.gene000887.t1 AT5G09420 60.714 56 22 0 307 362 175 230 6.53e-15 76.6
MS.gene000887.t1 AT1G08980 52.381 63 30 0 308 370 133 195 2.62e-13 71.2
MS.gene000887.t1 AT4G23050 52.542 59 26 1 236 292 528 586 5.06e-12 67.8
MS.gene000887.t1 AT4G23050 52.542 59 26 1 236 292 527 585 5.15e-12 67.8
MS.gene000887.t1 AT1G67890 50.847 59 27 1 236 292 547 605 1.11e-11 66.6
MS.gene000887.t1 AT1G67890 50.847 59 27 1 236 292 419 477 1.18e-11 66.6
MS.gene000887.t1 AT1G67890 50.847 59 27 1 236 292 547 605 1.26e-11 66.6
MS.gene000887.t1 AT1G67890 50.847 59 27 1 236 292 547 605 1.26e-11 66.6

Find 92 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCGATCCGGTGGTTTATT+TGG 0.138656 7.2:+67751763 None:intergenic
TTTCTTTGATAAAGGAAAAT+TGG 0.209588 7.2:-67752144 MS.gene000887:CDS
CTGCAAATCCACAGAAAGTT+TGG 0.253643 7.2:-67752692 MS.gene000887:CDS
TCAAAGACTTTCTTTGATAA+AGG 0.262285 7.2:-67752152 MS.gene000887:CDS
AGGAAAGAACTCTGTGATTA+TGG 0.291331 7.2:+67751906 None:intergenic
AGCAATCAAGTGAGTTAATT+AGG 0.306294 7.2:-67752763 MS.gene000887:CDS
ATGAGGGTGATGGGTGTTCT+AGG 0.323726 7.2:+67752225 None:intergenic
TTGAAGATAATTTATTCCTT+TGG 0.346376 7.2:+67751801 None:intergenic
TCTATTGAACGTGGTTGTTA+TGG 0.353509 7.2:-67752410 MS.gene000887:CDS
CCAACTCTACGCAGTATATC+AGG 0.360852 7.2:+67751586 None:intergenic
TATAGACACTAACAACATTC+CGG 0.367420 7.2:-67752630 MS.gene000887:CDS
GCTGGATTCCGTGGGATACT+TGG 0.368997 7.2:-67751697 MS.gene000887:CDS
TCAACAAGTCTGGACACTAT+TGG 0.384191 7.2:-67751625 MS.gene000887:CDS
GTTGCTTGTTCATCTATTGA+TGG 0.394365 7.2:-67752194 MS.gene000887:CDS
AGTGATGATGCTGGTGAAAC+TGG 0.394792 7.2:-67752734 MS.gene000887:CDS
AGTGTTGTTGAAAACGAAAA+TGG 0.402970 7.2:-67752512 MS.gene000887:CDS
CACTTTGTGATGGAGCAAAT+AGG 0.403784 7.2:-67752805 MS.gene000887:CDS
ATAGACACTAACAACATTCC+GGG 0.406387 7.2:-67752629 MS.gene000887:CDS
CCTCTCTGCCGCCACCGCTC+AGG 0.407279 7.2:-67752274 MS.gene000887:CDS
TTGTCCAATGGTAACCGATC+AGG 0.413275 7.2:-67752345 MS.gene000887:CDS
AGATGAACAAGCAACATGTT+TGG 0.413737 7.2:+67752202 None:intergenic
GGCAGAGAGGGAACGAAGTC+CGG 0.418799 7.2:+67752287 None:intergenic
TATTGATGGCCGAACACTGC+TGG 0.428258 7.2:-67752180 MS.gene000887:CDS
CATGGTAGCCTGAGCGGTGG+CGG 0.440771 7.2:+67752266 None:intergenic
CATACCCGTTTCAACAAGTC+TGG 0.453788 7.2:-67751635 MS.gene000887:CDS
ATCTAACGTTAGACATCAAA+AGG 0.455033 7.2:-67751849 MS.gene000887:CDS
CATTCTTCCCAAACTTTCTG+TGG 0.468295 7.2:+67752684 None:intergenic
TGCAAATCCACAGAAAGTTT+GGG 0.468905 7.2:-67752691 MS.gene000887:CDS
TCTTGTGAAGTGTTCTGAAA+AGG 0.470377 7.2:+67751875 None:intergenic
GTTATTGATATCAAGCGAAA+AGG 0.471029 7.2:-67752368 MS.gene000887:CDS
TTGATGAATCCAGCAGTGTT+CGG 0.478417 7.2:+67752171 None:intergenic
AGTCCGGTGGATCTGATAGA+TGG 0.480139 7.2:+67752303 None:intergenic
CACTATTGGTTGGTTTGCAA+AGG 0.484627 7.2:-67751611 MS.gene000887:CDS
AGAGGGGTGAGAGTGCCTGC+TGG 0.491825 7.2:-67751715 MS.gene000887:CDS
CTTTGATAAAGGAAAATTGG+AGG 0.492719 7.2:-67752141 MS.gene000887:CDS
ACACCATATATTCTCAGAAA+AGG 0.493278 7.2:-67751933 MS.gene000887:CDS
GTGTCCAGACTTGTTGAAAC+GGG 0.494320 7.2:+67751631 None:intergenic
CATGTAGTAACACGTCGATC+CGG 0.498411 7.2:+67751751 None:intergenic
TAATCACAGAGTTCTTTCCT+AGG 0.502454 7.2:-67751903 MS.gene000887:CDS
TGTCCAATGGTAACCGATCA+GGG 0.505452 7.2:-67752344 MS.gene000887:CDS
CGCCACCGCTCAGGCTACCA+TGG 0.506800 7.2:-67752265 MS.gene000887:CDS
CTGAGCGGTGGCGGCAGAGA+GGG 0.509616 7.2:+67752275 None:intergenic
ATATTGCTTCCTTGCAATCC+CGG 0.514677 7.2:+67752611 None:intergenic
TCATCTGTAGGCATTAATCA+AGG 0.515128 7.2:-67752434 MS.gene000887:CDS
AATCACAGAGTTCTTTCCTA+GGG 0.528477 7.2:-67751902 MS.gene000887:CDS
CACATGGTTTCACTTTGTGA+TGG 0.533169 7.2:-67752815 MS.gene000887:CDS
CATGTTTGGATGAGGGTGAT+GGG 0.533651 7.2:+67752216 None:intergenic
AGTGTCCAGACTTGTTGAAA+CGG 0.534842 7.2:+67751630 None:intergenic
TCTAGAGAAAGGTTCTTCCA+TGG 0.543236 7.2:-67752546 MS.gene000887:CDS
AGTGAGTCAAATCTAGAGAA+AGG 0.545017 7.2:-67752557 MS.gene000887:CDS
AACAACATTCCGGGATTGCA+AGG 0.548510 7.2:-67752620 MS.gene000887:CDS
AGTATCCCACGGAATCCAGC+AGG 0.553674 7.2:+67751700 None:intergenic
ACATGTGACGTTTCATCTGT+AGG 0.554089 7.2:-67752446 MS.gene000887:CDS
CTAGAGAAAGGTTCTTCCAT+GGG 0.556010 7.2:-67752545 MS.gene000887:CDS
GGACTGTGTTGCATTACAAA+GGG 0.557662 7.2:+67751542 None:intergenic
CAAGTCTGGACACTATTGGT+TGG 0.562352 7.2:-67751621 MS.gene000887:CDS
CGCTTGATATCAATAACAAG+CGG 0.562508 7.2:+67752374 None:intergenic
AGAGTGCCTGCTGGATTCCG+TGG 0.563237 7.2:-67751706 MS.gene000887:CDS
CCTGATATACTGCGTAGAGT+TGG 0.571803 7.2:-67751586 MS.gene000887:CDS
ACATGTTTGGATGAGGGTGA+TGG 0.573088 7.2:+67752215 None:intergenic
GGGACTGTGTTGCATTACAA+AGG 0.573217 7.2:+67751541 None:intergenic
AACACTGCCGCTGTTACCCA+TGG 0.575123 7.2:+67752529 None:intergenic
GGTTTATTTGGCAACGACGG+TGG 0.587615 7.2:+67751775 None:intergenic
CATCAAAAGGCATCTTAGCA+TGG 0.590160 7.2:-67751836 MS.gene000887:CDS
TTGCCATCTATCAGATCCAC+CGG 0.596377 7.2:-67752306 MS.gene000887:CDS
TAAACTGCGTGTTGTAGCCA+TGG 0.597395 7.2:+67752248 None:intergenic
AAGGAAAATTGGAGGAACAA+AGG 0.597613 7.2:-67752133 MS.gene000887:CDS
CCTGAGCGGTGGCGGCAGAG+AGG 0.597792 7.2:+67752274 None:intergenic
CATGTGTTGATACTTCTAGA+GGG 0.605370 7.2:-67751732 MS.gene000887:CDS
ATGGCTCTCGACGTTGCCAA+AGG 0.607066 7.2:-67751817 MS.gene000887:CDS
ATCGAAATCCAAGTATCCCA+CGG 0.609479 7.2:+67751689 None:intergenic
ACAAGCAACATGTTTGGATG+AGG 0.614139 7.2:+67752208 None:intergenic
ACATGTGTTGATACTTCTAG+AGG 0.616849 7.2:-67751733 MS.gene000887:CDS
TCCAATGGTAACCGATCAGG+GGG 0.616945 7.2:-67752342 MS.gene000887:CDS
GTCGTTGCCAAATAAACCAC+CGG 0.617074 7.2:-67751770 MS.gene000887:CDS
GTAGTAACACGTCGATCCGG+TGG 0.629540 7.2:+67751754 None:intergenic
AGCCATGGTAGCCTGAGCGG+TGG 0.630297 7.2:+67752263 None:intergenic
CAAGCGAAAAGGTTGTCCAA+TGG 0.631069 7.2:-67752357 MS.gene000887:CDS
GGATCTGATAGATGGCAAGA+AGG 0.631288 7.2:+67752311 None:intergenic
AGGAACAATAGTGATGATGC+TGG 0.639339 7.2:-67752743 MS.gene000887:CDS
GTCCAATGGTAACCGATCAG+GGG 0.643288 7.2:-67752343 MS.gene000887:CDS
GTTCTGAAAAGGCTTCCCCT+AGG 0.643879 7.2:+67751886 None:intergenic
AATCAAGGTTCTATTGAACG+TGG 0.648501 7.2:-67752419 MS.gene000887:CDS
GGTGGTTTATTTGGCAACGA+CGG 0.659116 7.2:+67751772 None:intergenic
ATCACAGAGTTCTTTCCTAG+GGG 0.664636 7.2:-67751901 MS.gene000887:CDS
CAAGCAACATGTTTGGATGA+GGG 0.665304 7.2:+67752209 None:intergenic
GAGTGCCTGCTGGATTCCGT+GGG 0.666541 7.2:-67751705 MS.gene000887:CDS
ACGTGGTTGTTATGGCACAA+AGG 0.670924 7.2:-67752402 MS.gene000887:CDS
GGTTCTTCCATGGGTAACAG+CGG 0.676887 7.2:-67752536 MS.gene000887:CDS
AGAGAGGGAACGAAGTCCGG+TGG 0.679615 7.2:+67752290 None:intergenic
ATGTGTTGATACTTCTAGAG+GGG 0.688463 7.2:-67751731 MS.gene000887:CDS
TGTAGCCATGGTAGCCTGAG+CGG 0.708657 7.2:+67752260 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATGAAAAACAATACATTT+AGG + chr7.2:67752414-67752433 None:intergenic 20.0%
!! TTGAAGATAATTTATTCCTT+TGG + chr7.2:67752569-67752588 None:intergenic 20.0%
!! TTTCTTTGATAAAGGAAAAT+TGG - chr7.2:67752223-67752242 MS.gene000887:CDS 20.0%
! GGTGCTTGTAAAAATATATA+TGG + chr7.2:67752807-67752826 None:intergenic 25.0%
! TCAAAGACTTTCTTTGATAA+AGG - chr7.2:67752215-67752234 MS.gene000887:CDS 25.0%
ACACCATATATTCTCAGAAA+AGG - chr7.2:67752434-67752453 MS.gene000887:CDS 30.0%
AGCAATCAAGTGAGTTAATT+AGG - chr7.2:67751604-67751623 MS.gene000887:CDS 30.0%
ATCTAACGTTAGACATCAAA+AGG - chr7.2:67752518-67752537 MS.gene000887:CDS 30.0%
CTTTGATAAAGGAAAATTGG+AGG - chr7.2:67752226-67752245 MS.gene000887:CDS 30.0%
GTTATTGATATCAAGCGAAA+AGG - chr7.2:67751999-67752018 MS.gene000887:intron 30.0%
TATAGACACTAACAACATTC+CGG - chr7.2:67751737-67751756 MS.gene000887:CDS 30.0%
! AGTGTTGTTGAAAACGAAAA+TGG - chr7.2:67751855-67751874 MS.gene000887:CDS 30.0%
!!! TAGTGTTTTTTGCTGATACA+TGG + chr7.2:67752368-67752387 None:intergenic 30.0%
AACTGGAGCTTATTGTCTAT+TGG - chr7.2:67752303-67752322 MS.gene000887:CDS 35.0%
AAGGAAAATTGGAGGAACAA+AGG - chr7.2:67752234-67752253 MS.gene000887:CDS 35.0%
AATCAAGGTTCTATTGAACG+TGG - chr7.2:67751948-67751967 MS.gene000887:intron 35.0%
AATCACAGAGTTCTTTCCTA+GGG - chr7.2:67752465-67752484 MS.gene000887:CDS 35.0%
AGATGAACAAGCAACATGTT+TGG + chr7.2:67752168-67752187 None:intergenic 35.0%
AGGAAAGAACTCTGTGATTA+TGG + chr7.2:67752464-67752483 None:intergenic 35.0%
AGTGAGTCAAATCTAGAGAA+AGG - chr7.2:67751810-67751829 MS.gene000887:CDS 35.0%
ATAGACACTAACAACATTCC+GGG - chr7.2:67751738-67751757 MS.gene000887:CDS 35.0%
CCATACTAGTGATTTCAATC+AGG - chr7.2:67752339-67752358 MS.gene000887:CDS 35.0%
CCTGATTGAAATCACTAGTA+TGG + chr7.2:67752342-67752361 None:intergenic 35.0%
CGCTTGATATCAATAACAAG+CGG + chr7.2:67751996-67752015 None:intergenic 35.0%
GGCACTTTCAAAGTTAGTAT+TGG - chr7.2:67752255-67752274 MS.gene000887:CDS 35.0%
GTTGCTTGTTCATCTATTGA+TGG - chr7.2:67752173-67752192 MS.gene000887:CDS 35.0%
TAATCACAGAGTTCTTTCCT+AGG - chr7.2:67752464-67752483 MS.gene000887:CDS 35.0%
TCATCTGTAGGCATTAATCA+AGG - chr7.2:67751933-67751952 MS.gene000887:CDS 35.0%
TCTATTGAACGTGGTTGTTA+TGG - chr7.2:67751957-67751976 MS.gene000887:intron 35.0%
TGCAAATCCACAGAAAGTTT+GGG - chr7.2:67751676-67751695 MS.gene000887:CDS 35.0%
! ACATGTGTTGATACTTCTAG+AGG - chr7.2:67752634-67752653 MS.gene000887:CDS 35.0%
! ATGTGTTGATACTTCTAGAG+GGG - chr7.2:67752636-67752655 MS.gene000887:CDS 35.0%
! CATGTGTTGATACTTCTAGA+GGG - chr7.2:67752635-67752654 MS.gene000887:CDS 35.0%
! CTTGGATTTCGATTTTCACA+CGG - chr7.2:67752688-67752707 MS.gene000887:CDS 35.0%
! TCTGCCCATTCTAGAAAAAA+GGG - chr7.2:67751897-67751916 MS.gene000887:CDS 35.0%
!! CAAAGTTAGTATTGGTGTGT+GGG - chr7.2:67752263-67752282 MS.gene000887:CDS 35.0%
!! TCAAAGTTAGTATTGGTGTG+TGG - chr7.2:67752262-67752281 MS.gene000887:CDS 35.0%
!! TCGCCTTTTCTGAGAATATA+TGG + chr7.2:67752440-67752459 None:intergenic 35.0%
!! TCTTGTGAAGTGTTCTGAAA+AGG + chr7.2:67752495-67752514 None:intergenic 35.0%
!!! ATGTCCCCTTTTTTCTAGAA+TGG + chr7.2:67751905-67751924 None:intergenic 35.0%
!!! TGTCCCCTTTTTTCTAGAAT+GGG + chr7.2:67751904-67751923 None:intergenic 35.0%
AAGCTCCAGTTGTCATCTTA+TGG + chr7.2:67752294-67752313 None:intergenic 40.0%
ACAAGCAACATGTTTGGATG+AGG + chr7.2:67752162-67752181 None:intergenic 40.0%
ACATGTGACGTTTCATCTGT+AGG - chr7.2:67751921-67751940 MS.gene000887:CDS 40.0%
ATATTGCTTCCTTGCAATCC+CGG + chr7.2:67751759-67751778 None:intergenic 40.0%
ATCACAGAGTTCTTTCCTAG+GGG - chr7.2:67752466-67752485 MS.gene000887:CDS 40.0%
ATCGAAATCCAAGTATCCCA+CGG + chr7.2:67752681-67752700 None:intergenic 40.0%
CAAGCAACATGTTTGGATGA+GGG + chr7.2:67752161-67752180 None:intergenic 40.0%
CATTCTTCCCAAACTTTCTG+TGG + chr7.2:67751686-67751705 None:intergenic 40.0%
CCAGTTGTCATCTTATGGTA+GGG + chr7.2:67752289-67752308 None:intergenic 40.0%
CTAGAGAAAGGTTCTTCCAT+GGG - chr7.2:67751822-67751841 MS.gene000887:CDS 40.0%
CTGCAAATCCACAGAAAGTT+TGG - chr7.2:67751675-67751694 MS.gene000887:CDS 40.0%
TCAACAAGTCTGGACACTAT+TGG - chr7.2:67752742-67752761 MS.gene000887:CDS 40.0%
TCCAGTTGTCATCTTATGGT+AGG + chr7.2:67752290-67752309 None:intergenic 40.0%
TCTAGAGAAAGGTTCTTCCA+TGG - chr7.2:67751821-67751840 MS.gene000887:CDS 40.0%
TTGATGAATCCAGCAGTGTT+CGG + chr7.2:67752199-67752218 None:intergenic 40.0%
! AGGAACAATAGTGATGATGC+TGG - chr7.2:67751624-67751643 MS.gene000887:CDS 40.0%
! CACTTTGTGATGGAGCAAAT+AGG - chr7.2:67751562-67751581 MS.gene000887:CDS 40.0%
! CTCTGCCCATTCTAGAAAAA+AGG - chr7.2:67751896-67751915 MS.gene000887:CDS 40.0%
! CTGCCCATTCTAGAAAAAAG+GGG - chr7.2:67751898-67751917 MS.gene000887:CDS 40.0%
!! AGTGTCCAGACTTGTTGAAA+CGG + chr7.2:67752740-67752759 None:intergenic 40.0%
!! CACTATTGGTTGGTTTGCAA+AGG - chr7.2:67752756-67752775 MS.gene000887:CDS 40.0%
!! CATCAAAAGGCATCTTAGCA+TGG - chr7.2:67752531-67752550 MS.gene000887:CDS 40.0%
AACAACATTCCGGGATTGCA+AGG - chr7.2:67751747-67751766 MS.gene000887:CDS 45.0%
ACATGTTTGGATGAGGGTGA+TGG + chr7.2:67752155-67752174 None:intergenic 45.0%
ACGTGGTTGTTATGGCACAA+AGG - chr7.2:67751965-67751984 MS.gene000887:intron 45.0%
CAAGCGAAAAGGTTGTCCAA+TGG - chr7.2:67752010-67752029 MS.gene000887:intron 45.0%
CAAGTCTGGACACTATTGGT+TGG - chr7.2:67752746-67752765 MS.gene000887:CDS 45.0%
CATACCCGTTTCAACAAGTC+TGG - chr7.2:67752732-67752751 MS.gene000887:CDS 45.0%
CATGTAGTAACACGTCGATC+CGG + chr7.2:67752619-67752638 None:intergenic 45.0%
CATGTTTGGATGAGGGTGAT+GGG + chr7.2:67752154-67752173 None:intergenic 45.0%
CCAACTCTACGCAGTATATC+AGG + chr7.2:67752784-67752803 None:intergenic 45.0%
CCCTACCATAAGATGACAAC+TGG - chr7.2:67752286-67752305 MS.gene000887:CDS 45.0%
CCTGATATACTGCGTAGAGT+TGG - chr7.2:67752781-67752800 MS.gene000887:CDS 45.0%
GGATCTGATAGATGGCAAGA+AGG + chr7.2:67752059-67752078 None:intergenic 45.0%
GGTGGTTTATTTGGCAACGA+CGG + chr7.2:67752598-67752617 None:intergenic 45.0%
GTCGTTGCCAAATAAACCAC+CGG - chr7.2:67752597-67752616 MS.gene000887:CDS 45.0%
TAAACTGCGTGTTGTAGCCA+TGG + chr7.2:67752122-67752141 None:intergenic 45.0%
TGTCCAATGGTAACCGATCA+GGG - chr7.2:67752023-67752042 MS.gene000887:intron 45.0%
TTGCCATCTATCAGATCCAC+CGG - chr7.2:67752061-67752080 MS.gene000887:intron 45.0%
TTGTCCAATGGTAACCGATC+AGG - chr7.2:67752022-67752041 MS.gene000887:intron 45.0%
! AGTGATGATGCTGGTGAAAC+TGG - chr7.2:67751633-67751652 MS.gene000887:CDS 45.0%
!! GTGTCCAGACTTGTTGAAAC+GGG + chr7.2:67752739-67752758 None:intergenic 45.0%
!!! ACACGGTGCTGTTTTTCATG+GGG - chr7.2:67752705-67752724 MS.gene000887:CDS 45.0%
!!! CACACGGTGCTGTTTTTCAT+GGG - chr7.2:67752704-67752723 MS.gene000887:CDS 45.0%
!!! TCACACGGTGCTGTTTTTCA+TGG - chr7.2:67752703-67752722 MS.gene000887:CDS 45.0%
AGGCTTGAAAACCCCCTGAT+CGG + chr7.2:67752039-67752058 None:intergenic 50.0%
AGTCCGGTGGATCTGATAGA+TGG + chr7.2:67752067-67752086 None:intergenic 50.0%
CGTCGATCCGGTGGTTTATT+TGG + chr7.2:67752607-67752626 None:intergenic 50.0%
GGTTCTTCCATGGGTAACAG+CGG - chr7.2:67751831-67751850 MS.gene000887:CDS 50.0%
GGTTTATTTGGCAACGACGG+TGG + chr7.2:67752595-67752614 None:intergenic 50.0%
GTCCAATGGTAACCGATCAG+GGG - chr7.2:67752024-67752043 MS.gene000887:intron 50.0%
TCCAATGGTAACCGATCAGG+GGG - chr7.2:67752025-67752044 MS.gene000887:intron 50.0%
! TATTGATGGCCGAACACTGC+TGG - chr7.2:67752187-67752206 MS.gene000887:CDS 50.0%
!! ATGAGGGTGATGGGTGTTCT+AGG + chr7.2:67752145-67752164 None:intergenic 50.0%
!! GTTCTGAAAAGGCTTCCCCT+AGG + chr7.2:67752484-67752503 None:intergenic 50.0%
!!! CACGGTGCTGTTTTTCATGG+GGG - chr7.2:67752706-67752725 MS.gene000887:CDS 50.0%
AACACTGCCGCTGTTACCCA+TGG + chr7.2:67751841-67751860 None:intergenic 55.0%
ACCCCCTGATCGGTTACCAT+TGG + chr7.2:67752029-67752048 None:intergenic 55.0%
AGTATCCCACGGAATCCAGC+AGG + chr7.2:67752670-67752689 None:intergenic 55.0%
ATGGCTCTCGACGTTGCCAA+AGG - chr7.2:67752550-67752569 MS.gene000887:CDS 55.0%
GCTGGATTCCGTGGGATACT+TGG - chr7.2:67752670-67752689 MS.gene000887:CDS 55.0%
GTAGTAACACGTCGATCCGG+TGG + chr7.2:67752616-67752635 None:intergenic 55.0%
TGTAGCCATGGTAGCCTGAG+CGG + chr7.2:67752110-67752129 None:intergenic 55.0%
AGAGAGGGAACGAAGTCCGG+TGG + chr7.2:67752080-67752099 None:intergenic 60.0%
GAGTGCCTGCTGGATTCCGT+GGG - chr7.2:67752662-67752681 MS.gene000887:CDS 60.0%
GGCAGAGAGGGAACGAAGTC+CGG + chr7.2:67752083-67752102 None:intergenic 60.0%
! AGAGTGCCTGCTGGATTCCG+TGG - chr7.2:67752661-67752680 MS.gene000887:CDS 60.0%
AGCCATGGTAGCCTGAGCGG+TGG + chr7.2:67752107-67752126 None:intergenic 65.0%
CATGGTAGCCTGAGCGGTGG+CGG + chr7.2:67752104-67752123 None:intergenic 65.0%
!! AGAGGGGTGAGAGTGCCTGC+TGG - chr7.2:67752652-67752671 MS.gene000887:CDS 65.0%
CGCCACCGCTCAGGCTACCA+TGG - chr7.2:67752102-67752121 MS.gene000887:intron 70.0%
! CTGAGCGGTGGCGGCAGAGA+GGG + chr7.2:67752095-67752114 None:intergenic 70.0%
CCTCTCTGCCGCCACCGCTC+AGG - chr7.2:67752093-67752112 MS.gene000887:intron 75.0%
! CCTGAGCGGTGGCGGCAGAG+AGG + chr7.2:67752096-67752115 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 67751555 67752834 67751555 ID=MS.gene000887
chr7.2 mRNA 67751555 67752834 67751555 ID=MS.gene000887.t1;Parent=MS.gene000887
chr7.2 exon 67752123 67752834 67752123 ID=MS.gene000887.t1.exon1;Parent=MS.gene000887.t1
chr7.2 CDS 67752123 67752834 67752123 ID=cds.MS.gene000887.t1;Parent=MS.gene000887.t1
chr7.2 exon 67751555 67751955 67751555 ID=MS.gene000887.t1.exon2;Parent=MS.gene000887.t1
chr7.2 CDS 67751555 67751955 67751555 ID=cds.MS.gene000887.t1;Parent=MS.gene000887.t1
Gene Sequence

>MS.gene000887

ATGGTTTCACTTTGTGATGGAGCAAATAGGAATGATGAATCAAAAGTTGAGCAATCAAGTGAGTTAATTAGGAACAATAGTGATGATGCTGGTGAAACTGGCAAAGTTGAAGTTGAAATGCTGCAAATCCACAGAAAGTTTGGGAAGAATGATATTGCTGAAAGAAAGAAATCAGATTCTTCTATAGACACTAACAACATTCCGGGATTGCAAGGAAGCAATATTTCTTATGAAAGCAGTGAAAAGTATGTGTCAAGTGAGTCAAATCTAGAGAAAGGTTCTTCCATGGGTAACAGCGGCAGTGTTGTTGAAAACGAAAATGGCGACACTGTTTTAAGAAGCTCTGCCCATTCTAGAAAAAAGGGGACATGTGACGTTTCATCTGTAGGCATTAATCAAGGTTCTATTGAACGTGGTTGTTATGGCACAAAGGAGTCACCGCTTGTTATTGATATCAAGCGAAAAGGTTGTCCAATGGTAACCGATCAGGGGGTTTTCAAGCCTTCTTGCCATCTATCAGATCCACCGGACTTCGTTCCCTCTCTGCCGCCACCGCTCAGGCTACCATGGCTACAACACGCAGTTTACCTAGAACACCCATCACCCTCATCCAAACATGTTGCTTGTTCATCTATTGATGGCCGAACACTGCTGGATTCATCAAAGACTTTCTTTGATAAAGGAAAATTGGAGGAACAAAGGCACTTTCAAAGTTAGTATTGGTGTGTGGGCCCTACCATAAGATGACAACTGGAGCTTATTGTCTATTGGCTGTTGTGCTATACCATACTAGTGATTTCAATCAGGTTACCATGTATCAGCAAAAAACACTAGATATAAAGAAAAGATTGCAACACCTAAATGTATTGTTTTTCATAGACACCATATATTCTCAGAAAAGGCGAGCCATAATCACAGAGTTCTTTCCTAGGGGAAGCCTTTTCAGAACACTTCACAAGAACAATCTAACGTTAGACATCAAAAGGCATCTTAGCATGGCTCTCGACGTTGCCAAAGGAATAAATTATCTTCAATCTCCACCGTCGTTGCCAAATAAACCACCGGATCGACGTGTTACTACATGTGTTGATACTTCTAGAGGGGTGAGAGTGCCTGCTGGATTCCGTGGGATACTTGGATTTCGATTTTCACACGGTGCTGTTTTTCATGGGGGAATCATACCCGTTTCAACAAGTCTGGACACTATTGGTTGGTTTGCAAAGGATCCTGATATACTGCGTAGAGTTGGCCATATATATTTTTACAAGCACCCTTTGTAA
Protein sequence

>MS.gene000887.t1

MVSLCDGANRNDESKVEQSSELIRNNSDDAGETGKVEVEMLQIHRKFGKNDIAERKKSDSSIDTNNIPGLQGSNISYESSEKYVSSESNLEKGSSMGNSGSVVENENGDTVLRSSAHSRKKGTCDVSSVGINQGSIERGCYGTKESPLVIDIKRKGCPMVTDQGVFKPSCHLSDPPDFVPSLPPPLRLPWLQHAVYLEHPSPSSKHVACSSIDGRTLLDSSKTFFDKGKLEEQRHFQNTIYSQKRRAIITEFFPRGSLFRTLHKNNLTLDIKRHLSMALDVAKGINYLQSPPSLPNKPPDRRVTTCVDTSRGVRVPAGFRGILGFRFSHGAVFHGGIIPVSTSLDTIGWFAKDPDILRRVGHIYFYKHPL