AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00108

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00108.t1 MTR_2g033170 96.049 329 13 0 1 329 1 329 0.0 529
MS.gene00108.t1 MTR_4g123040 65.476 336 88 9 1 329 1 315 1.17e-125 362
MS.gene00108.t1 MTR_1g086530 69.032 155 48 0 11 165 20 174 3.70e-82 250
MS.gene00108.t1 MTR_1g086510 68.047 169 47 2 18 186 15 176 7.15e-81 247
MS.gene00108.t1 MTR_1g110460 62.428 173 65 0 18 190 20 192 4.48e-78 241
MS.gene00108.t1 MTR_7g035075 82.301 113 20 0 18 130 8 120 2.37e-67 210
MS.gene00108.t1 MTR_6g006030 78.947 114 24 0 18 131 8 121 1.24e-65 206
MS.gene00108.t1 MTR_1g045610 70.476 105 31 0 25 129 22 126 1.23e-50 169
MS.gene00108.t1 MTR_1g073170 59.200 125 48 1 5 129 4 125 3.01e-49 165
MS.gene00108.t1 MTR_5g029840 56.693 127 53 1 20 146 8 132 8.25e-46 159
MS.gene00108.t1 MTR_8g027345 59.664 119 46 1 21 137 9 127 3.51e-44 153
MS.gene00108.t1 MTR_2g096380 57.273 110 47 0 23 132 5 114 5.63e-44 151
MS.gene00108.t1 MTR_2g089620 61.682 107 41 0 20 126 8 114 1.23e-43 152
MS.gene00108.t1 MTR_2g011660 58.559 111 46 0 24 134 13 123 1.29e-43 153
MS.gene00108.t1 MTR_4g063100 58.333 108 45 0 25 132 8 115 1.61e-43 150
MS.gene00108.t1 MTR_4g091490 58.559 111 46 0 24 134 13 123 3.23e-43 152
MS.gene00108.t1 MTR_4g125520 62.385 109 41 0 24 132 12 120 4.04e-43 151
MS.gene00108.t1 MTR_7g117730 63.303 109 40 0 21 129 9 117 4.15e-43 149
MS.gene00108.t1 MTR_3g052450 54.054 111 51 0 20 130 36 146 9.65e-43 155
MS.gene00108.t1 MTR_3g074520 55.000 120 54 0 20 139 8 127 9.80e-43 151
MS.gene00108.t1 MTR_5g007370 55.556 117 52 0 18 134 6 122 1.33e-42 149
MS.gene00108.t1 MTR_4g478180 56.522 115 50 0 20 134 9 123 1.44e-42 150
MS.gene00108.t1 MTR_3g083540 63.208 106 39 0 21 126 38 143 2.65e-42 149
MS.gene00108.t1 MTR_1g062940 58.879 107 44 0 23 129 5 111 4.13e-42 145
MS.gene00108.t1 MTR_1g076150 54.622 119 54 0 20 138 8 126 4.78e-42 147
MS.gene00108.t1 MTR_1g100653 58.879 107 44 0 24 130 12 118 8.25e-42 147
MS.gene00108.t1 MTR_3g052430 54.630 108 49 0 23 130 40 147 1.10e-41 152
MS.gene00108.t1 MTR_4g121460 39.791 191 92 2 20 210 8 175 1.58e-41 147
MS.gene00108.t1 MTR_6g012690 52.381 126 59 1 20 144 8 133 2.77e-41 147
MS.gene00108.t1 MTR_8g095390 62.376 101 38 0 26 126 14 114 3.31e-41 146
MS.gene00108.t1 MTR_8g042410 47.407 135 64 1 2 129 8 142 5.42e-41 150
MS.gene00108.t1 MTR_7g011170 53.043 115 54 0 20 134 8 122 5.53e-41 145
MS.gene00108.t1 MTR_1g017000 57.407 108 45 1 20 126 8 115 8.60e-41 143
MS.gene00108.t1 MTR_7g076740 56.034 116 50 1 20 134 8 123 9.34e-41 144
MS.gene00108.t1 MTR_1g085040 54.310 116 53 0 24 139 12 127 1.04e-40 146
MS.gene00108.t1 MTR_3g065440 50.794 126 61 1 20 144 8 133 1.11e-40 144
MS.gene00108.t1 MTR_2g097910 56.481 108 47 0 24 131 20 127 1.20e-40 145
MS.gene00108.t1 MTR_4g102380 53.913 115 53 0 20 134 8 122 1.21e-40 143
MS.gene00108.t1 MTR_4g073420 50.649 154 66 2 26 170 14 166 1.24e-40 144
MS.gene00108.t1 MTR_5g078140 53.043 115 54 0 20 134 8 122 1.39e-40 144
MS.gene00108.t1 MTR_3g097450 63.366 101 37 0 26 126 14 114 1.67e-40 144
MS.gene00108.t1 MTR_2g099740 56.311 103 45 0 24 126 12 114 1.90e-40 146
MS.gene00108.t1 MTR_1g043080 58.252 103 43 0 24 126 12 114 2.37e-40 142
MS.gene00108.t1 MTR_7g115650 52.252 111 53 0 20 130 8 118 2.52e-40 140
MS.gene00108.t1 MTR_4g065017 56.481 108 47 0 24 131 17 124 2.61e-40 144
MS.gene00108.t1 MTR_3g011610 54.717 106 48 0 24 129 37 142 5.22e-40 147
MS.gene00108.t1 MTR_8g031360 56.881 109 46 1 19 126 8 116 7.88e-40 142
MS.gene00108.t1 MTR_4g082290 51.639 122 59 0 20 141 8 129 8.13e-40 144
MS.gene00108.t1 MTR_4g485530 55.085 118 53 0 19 136 7 124 8.82e-40 139
MS.gene00108.t1 MTR_7g010210 35.039 254 146 7 20 257 8 258 1.06e-39 142
MS.gene00108.t1 MTR_7g096930 55.856 111 49 0 20 130 8 118 1.10e-39 141
MS.gene00108.t1 MTR_8g098860 57.009 107 46 0 24 130 12 118 1.12e-39 142
MS.gene00108.t1 MTR_7g110830 55.856 111 49 0 24 134 12 122 1.20e-39 143
MS.gene00108.t1 MTR_5g079670 49.587 121 61 0 20 140 7 127 1.32e-39 139
MS.gene00108.t1 MTR_4g082230 51.639 122 59 0 20 141 8 129 1.66e-39 144
MS.gene00108.t1 MTR_2g067420 57.692 104 44 0 20 123 10 113 2.73e-39 141
MS.gene00108.t1 MTR_1g043050 57.282 103 44 0 24 126 12 114 2.78e-39 139
MS.gene00108.t1 MTR_8g017440 56.311 103 45 0 24 126 12 114 3.04e-39 141
MS.gene00108.t1 MTR_0008s0390 55.455 110 49 0 19 128 8 117 4.26e-39 139
MS.gene00108.t1 MTR_1g021230 54.717 106 48 0 24 129 57 162 6.82e-39 143
MS.gene00108.t1 MTR_7g010210 40.000 180 97 4 20 189 8 186 7.75e-39 139
MS.gene00108.t1 MTR_0251s0050 54.464 112 51 0 19 130 8 119 8.56e-39 139
MS.gene00108.t1 MTR_1g100667 52.101 119 57 0 25 143 14 132 9.02e-39 138
MS.gene00108.t1 MTR_5g010020 61.856 97 37 0 24 120 12 108 1.17e-38 140
MS.gene00108.t1 MTR_2g034790 56.075 107 47 0 20 126 8 114 1.35e-38 139
MS.gene00108.t1 MTR_0008s0280 56.190 105 46 0 25 129 13 117 1.43e-38 137
MS.gene00108.t1 MTR_1g085640 54.054 111 51 0 24 134 12 122 2.07e-38 140
MS.gene00108.t1 MTR_0008s0470 56.190 105 46 0 24 128 13 117 2.59e-38 138
MS.gene00108.t1 MTR_2g064160 53.398 103 48 0 24 126 11 113 2.72e-38 138
MS.gene00108.t1 MTR_2g089420 52.893 121 56 1 24 143 11 131 4.07e-38 141
MS.gene00108.t1 MTR_8g017540 54.369 103 47 0 24 126 58 160 4.09e-38 140
MS.gene00108.t1 MTR_4g100720 56.881 109 47 0 24 132 13 121 4.74e-38 134
MS.gene00108.t1 MTR_2g089450 56.075 107 47 0 20 126 8 114 6.60e-38 135
MS.gene00108.t1 MTR_3g028740 55.660 106 47 0 24 129 22 127 6.93e-38 138
MS.gene00108.t1 MTR_7g111290 55.172 116 52 0 24 139 12 127 9.85e-38 138
MS.gene00108.t1 MTR_3g039990 49.107 112 57 0 20 131 9 120 1.45e-37 136
MS.gene00108.t1 MTR_8g020490 54.464 112 49 1 15 126 1 110 1.47e-37 135
MS.gene00108.t1 MTR_8g017500 53.398 103 48 0 24 126 12 114 1.81e-37 137
MS.gene00108.t1 MTR_6g009430 50.435 115 57 0 20 134 8 122 1.91e-37 137
MS.gene00108.t1 MTR_8g017340 54.808 104 46 1 24 126 12 115 6.29e-37 138
MS.gene00108.t1 MTR_7g087130 51.402 107 52 0 20 126 8 114 6.34e-37 135
MS.gene00108.t1 MTR_0140s0030 51.402 107 52 0 20 126 9 115 6.40e-37 135
MS.gene00108.t1 MTR_0489s0020 51.402 107 52 0 20 126 9 115 6.40e-37 135
MS.gene00108.t1 MTR_1g112760 55.340 103 46 0 24 126 13 115 6.52e-37 132
MS.gene00108.t1 MTR_0063s0090 47.656 128 60 1 20 147 8 128 1.28e-36 131
MS.gene00108.t1 MTR_3g077110 55.340 103 46 0 24 126 12 114 1.79e-36 134
MS.gene00108.t1 MTR_4g105130 54.369 103 47 0 24 126 12 114 3.36e-36 134
MS.gene00108.t1 MTR_3g461490 49.593 123 61 1 23 144 11 133 5.66e-36 132
MS.gene00108.t1 MTR_6g012180 53.398 103 48 0 20 122 8 110 5.76e-36 132
MS.gene00108.t1 MTR_4g057635 54.630 108 48 1 20 126 8 115 8.76e-36 132
MS.gene00108.t1 MTR_6g055910 54.902 102 46 0 25 126 15 116 1.12e-35 130
MS.gene00108.t1 MTR_5g042030 50.442 113 56 0 22 134 5 117 2.63e-35 130
MS.gene00108.t1 MTR_8g017350 52.885 104 48 1 24 126 12 115 2.77e-35 135
MS.gene00108.t1 MTR_8g017390 52.885 104 48 1 24 126 12 115 7.25e-35 132
MS.gene00108.t1 MTR_3g103570 54.630 108 48 1 20 126 8 115 8.99e-35 130
MS.gene00108.t1 MTR_2g088170 46.774 124 62 1 10 129 11 134 2.41e-34 130
MS.gene00108.t1 MTR_1g017140 53.704 108 49 1 20 126 8 115 2.45e-34 129
MS.gene00108.t1 MTR_2g095520 53.846 104 47 1 20 122 8 111 3.96e-34 127
MS.gene00108.t1 MTR_8g006470 44.068 118 65 1 15 131 1 118 4.24e-34 127
MS.gene00108.t1 MTR_1g083630 48.361 122 58 1 8 129 1 117 4.94e-34 132
MS.gene00108.t1 MTR_5g014990 51.724 116 53 2 20 132 8 123 5.35e-34 127
MS.gene00108.t1 MTR_0197s0010 36.316 190 111 3 29 215 6 188 1.36e-33 124
MS.gene00108.t1 MTR_7g109320 53.211 109 51 0 20 128 8 116 4.32e-33 125
MS.gene00108.t1 MTR_7g102110 50.000 108 53 1 20 126 8 115 5.07e-33 123
MS.gene00108.t1 MTR_4g063100 66.234 77 26 0 56 132 10 86 5.69e-33 122
MS.gene00108.t1 MTR_6g090405 52.778 108 50 1 20 126 8 115 7.54e-33 122
MS.gene00108.t1 MTR_4g097570 54.902 102 45 1 20 120 8 109 1.53e-32 122
MS.gene00108.t1 MTR_2g096380 66.234 77 26 0 56 132 19 95 1.48e-31 118
MS.gene00108.t1 MTR_4g128670 53.846 104 47 1 20 122 8 111 1.62e-31 121
MS.gene00108.t1 MTR_5g079120 42.537 134 77 0 6 139 43 176 2.42e-31 120
MS.gene00108.t1 MTR_4g097570 54.369 103 45 2 20 120 8 110 5.91e-31 118
MS.gene00108.t1 MTR_5g062790 44.643 112 61 1 16 126 1 112 6.81e-31 118
MS.gene00108.t1 MTR_5g088080 46.296 108 57 1 23 129 11 118 8.65e-31 117
MS.gene00108.t1 MTR_5g088150 46.296 108 57 1 23 129 11 118 8.65e-31 117
MS.gene00108.t1 MTR_5g488210 46.296 108 57 1 23 129 11 118 8.65e-31 117
MS.gene00108.t1 MTR_5g088640 46.296 108 57 1 23 129 11 118 9.22e-31 117
MS.gene00108.t1 MTR_5g078910 50.485 103 51 0 24 126 7 109 1.30e-30 117
MS.gene00108.t1 MTR_5g488170 46.296 108 57 1 23 129 11 118 1.51e-30 116
MS.gene00108.t1 MTR_5g079290 50.485 103 51 0 24 126 17 119 3.10e-30 115
MS.gene00108.t1 MTR_8g060940 53.465 101 47 0 24 124 7 107 3.30e-30 115
MS.gene00108.t1 MTR_0247s0040 51.961 102 49 0 24 125 7 108 4.01e-30 113
MS.gene00108.t1 MTR_5g078800 50.476 105 52 0 24 128 7 111 6.62e-30 115
MS.gene00108.t1 MTR_5g079220 50.485 103 51 0 24 126 21 123 1.65e-29 114
MS.gene00108.t1 MTR_5g078950 49.533 107 54 0 19 125 2 108 2.58e-29 113
MS.gene00108.t1 MTR_0001s0360 50.485 103 51 0 24 126 7 109 4.08e-29 112
MS.gene00108.t1 MTR_4g029540 42.056 107 61 1 24 129 10 116 4.21e-29 113
MS.gene00108.t1 MTR_5g088610 42.609 115 65 1 16 129 1 115 5.34e-29 114
MS.gene00108.t1 MTR_7g017260 46.087 115 60 1 16 128 17 131 6.59e-29 112
MS.gene00108.t1 MTR_5g078860 50.485 103 51 0 24 126 7 109 1.44e-28 112
MS.gene00108.t1 MTR_0193s0090 48.544 103 53 0 24 126 7 109 2.96e-28 109
MS.gene00108.t1 MTR_5g078930 45.528 123 63 1 25 143 10 132 6.29e-27 105
MS.gene00108.t1 MTR_5g016510 33.520 179 104 3 22 197 1 167 8.50e-27 107
MS.gene00108.t1 MTR_7g061330 44.231 104 57 1 23 126 110 212 3.81e-26 108
MS.gene00108.t1 MTR_7g461410 44.231 104 57 1 23 126 110 212 3.81e-26 108
MS.gene00108.t1 MTR_5g007300 55.844 77 34 0 24 100 64 140 5.82e-26 100
MS.gene00108.t1 MTR_7g061330 44.231 104 57 1 23 126 74 176 8.66e-26 107
MS.gene00108.t1 MTR_6g055910 61.429 70 27 0 57 126 18 87 8.88e-26 103
MS.gene00108.t1 MTR_3g045430 40.678 118 69 1 24 140 13 130 1.71e-25 103
MS.gene00108.t1 MTR_7g111290 58.333 84 35 0 56 139 2 85 1.73e-25 104
MS.gene00108.t1 MTR_3g110028 33.974 156 96 2 23 178 82 230 3.75e-25 106
MS.gene00108.t1 MTR_5g070020 30.601 183 124 2 9 189 103 284 9.62e-25 103
MS.gene00108.t1 MTR_4g128190 42.609 115 52 2 18 131 5 106 1.07e-24 100
MS.gene00108.t1 MTR_5g049190 44.211 95 52 1 26 120 19 112 3.20e-24 99.4
MS.gene00108.t1 MTR_6g015455 42.478 113 64 1 22 134 1 112 3.26e-24 103
MS.gene00108.t1 MTR_1g085880 44.348 115 62 2 18 130 5 119 3.59e-24 97.8
MS.gene00108.t1 MTR_4g019370 43.689 103 57 1 26 128 38 139 5.54e-24 100
MS.gene00108.t1 MTR_3g101290 41.284 109 63 1 20 128 31 138 5.78e-24 98.2
MS.gene00108.t1 MTR_6g027340 38.739 111 67 1 29 139 19 128 7.87e-24 97.4
MS.gene00108.t1 MTR_1g026870 40.385 104 61 1 23 126 82 184 1.58e-23 102
MS.gene00108.t1 MTR_1g085770 44.348 115 62 2 18 130 5 119 2.13e-23 98.6
MS.gene00108.t1 MTR_7g037260 37.008 127 79 1 21 147 140 265 3.07e-23 99.0
MS.gene00108.t1 MTR_4g088015 36.000 125 79 1 23 147 218 341 4.93e-23 99.4
MS.gene00108.t1 MTR_6g027360 37.069 116 72 1 24 139 76 190 1.41e-22 96.3
MS.gene00108.t1 MTR_3g077650 37.838 111 67 2 21 130 176 285 1.44e-22 98.2
MS.gene00108.t1 MTR_4g094982 40.187 107 63 1 22 128 1 106 1.63e-22 95.5
MS.gene00108.t1 MTR_3g463400 41.414 99 57 1 22 120 129 226 2.38e-22 97.4
MS.gene00108.t1 MTR_4g105660 33.083 133 88 1 1 133 155 286 4.84e-22 96.3
MS.gene00108.t1 MTR_7g450950 42.308 104 57 2 26 127 157 259 4.78e-21 92.4
MS.gene00108.t1 MTR_7g035350 44.565 92 50 1 29 120 228 318 6.41e-21 93.2
MS.gene00108.t1 MTR_5g010650 43.878 98 54 1 23 120 107 203 8.94e-21 93.2
MS.gene00108.t1 MTR_1g057980 42.000 100 57 1 21 120 75 173 1.06e-20 90.9
MS.gene00108.t1 MTR_7g086960 30.387 181 110 4 26 206 89 253 1.21e-20 91.7
MS.gene00108.t1 MTR_6g074860 44.211 95 52 1 26 120 4 97 1.84e-20 89.0
MS.gene00108.t1 MTR_7g451170 43.750 96 51 2 26 120 191 284 2.17e-20 91.7
MS.gene00108.t1 MTR_5g041570 40.000 105 62 1 26 130 134 237 4.40e-20 90.9
MS.gene00108.t1 MTR_6g027370 36.842 114 71 1 26 139 99 211 5.49e-20 89.7
MS.gene00108.t1 MTR_4g082040 39.048 105 63 1 26 130 105 208 1.00e-19 89.7
MS.gene00108.t1 MTR_5g082910 41.071 112 61 2 9 120 6 112 1.26e-19 87.8
MS.gene00108.t1 MTR_7g061550 36.283 113 70 1 26 136 7 119 1.57e-19 88.6
MS.gene00108.t1 MTR_3g089045 34.646 127 82 1 18 144 8 133 1.68e-18 84.7
MS.gene00108.t1 MTR_7g037130 30.719 153 103 2 12 164 133 282 5.34e-18 84.0
MS.gene00108.t1 MTR_8g468380 37.143 140 73 4 29 159 25 158 1.09e-17 83.6
MS.gene00108.t1 MTR_5g038910 40.594 101 59 1 29 129 29 128 2.32e-17 82.8
MS.gene00108.t1 MTR_5g038910 40.594 101 59 1 29 129 29 128 4.00e-17 81.6
MS.gene00108.t1 MTR_4g063100 64.706 51 18 0 82 132 1 51 5.15e-17 78.2
MS.gene00108.t1 MTR_2g096380 64.706 51 18 0 82 132 1 51 1.73e-16 76.6
MS.gene00108.t1 MTR_0023s0210 40.244 82 49 0 19 100 2 83 9.59e-14 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00108.t1 AT5G49620 54.462 325 82 12 19 324 21 298 1.10e-88 268
MS.gene00108.t1 AT1G48000 74.675 154 35 1 22 175 30 179 5.08e-85 256
MS.gene00108.t1 AT5G49620 52.212 339 82 13 19 324 21 312 6.04e-85 259
MS.gene00108.t1 AT3G06490 50.148 337 111 11 1 316 1 301 1.04e-84 258
MS.gene00108.t1 AT2G47190 68.354 158 50 0 19 176 15 172 1.21e-78 241
MS.gene00108.t1 AT1G68320 71.329 143 41 0 23 165 18 160 1.37e-74 231
MS.gene00108.t1 AT1G25340 63.576 151 55 0 25 175 19 169 1.02e-69 219
MS.gene00108.t1 AT3G27810 80.000 110 22 0 21 130 17 126 3.01e-65 205
MS.gene00108.t1 AT1G25340 60.927 151 54 1 25 175 19 164 3.08e-64 204
MS.gene00108.t1 AT1G25340 60.927 151 54 1 25 175 19 164 6.78e-64 205
MS.gene00108.t1 AT5G40350 80.952 105 20 0 23 127 16 120 1.16e-62 198
MS.gene00108.t1 AT3G01530 71.681 113 32 0 17 129 18 130 9.43e-61 193
MS.gene00108.t1 AT3G24310 67.890 109 35 0 21 129 15 123 4.14e-50 168
MS.gene00108.t1 AT4G13480 68.571 105 33 0 25 129 7 111 2.56e-49 166
MS.gene00108.t1 AT3G30210 66.667 105 35 0 25 129 28 132 3.37e-49 166
MS.gene00108.t1 AT3G02940 60.000 115 46 0 20 134 8 122 1.86e-45 157
MS.gene00108.t1 AT5G59780 59.091 110 45 0 23 132 7 116 3.08e-45 154
MS.gene00108.t1 AT3G02940 60.000 115 46 0 20 134 8 122 3.70e-45 157
MS.gene00108.t1 AT3G02940 60.000 115 46 0 20 134 8 122 3.70e-45 157
MS.gene00108.t1 AT3G46130 58.929 112 46 0 25 136 10 121 3.88e-45 155
MS.gene00108.t1 AT5G16770 53.676 136 61 2 20 153 8 143 6.25e-44 154
MS.gene00108.t1 AT5G16770 53.676 136 61 2 20 153 8 143 6.25e-44 154
MS.gene00108.t1 AT5G16770 53.676 136 61 2 20 153 8 143 9.40e-44 153
MS.gene00108.t1 AT5G16770 53.676 136 61 2 20 153 8 143 9.40e-44 153
MS.gene00108.t1 AT5G54230 56.757 111 48 0 24 134 12 122 1.54e-43 152
MS.gene00108.t1 AT3G27810 85.135 74 11 0 57 130 4 77 1.67e-43 148
MS.gene00108.t1 AT3G13540 55.285 123 55 0 21 143 20 142 3.63e-43 149
MS.gene00108.t1 AT4G05100 58.559 111 46 0 24 134 13 123 5.16e-43 151
MS.gene00108.t1 AT5G65230 54.918 122 55 0 18 139 6 127 6.80e-43 150
MS.gene00108.t1 AT4G34990 67.327 101 33 0 26 126 14 114 6.84e-43 149
MS.gene00108.t1 AT4G21440 56.757 111 48 0 24 134 12 122 7.37e-43 151
MS.gene00108.t1 AT3G23250 40.462 173 99 1 20 192 8 176 1.17e-42 149
MS.gene00108.t1 AT4G28110 58.879 107 44 0 20 126 8 114 1.46e-42 149
MS.gene00108.t1 AT5G15310 55.652 115 51 0 20 134 8 122 1.57e-42 150
MS.gene00108.t1 AT5G15310 55.652 115 51 0 20 134 8 122 1.75e-42 149
MS.gene00108.t1 AT5G15310 55.652 115 51 0 20 134 8 122 1.94e-42 147
MS.gene00108.t1 AT1G22640 57.265 117 50 0 24 140 12 128 2.75e-42 147
MS.gene00108.t1 AT1G16490 58.879 107 44 0 20 126 10 116 5.19e-42 147
MS.gene00108.t1 AT3G01140 52.033 123 59 0 20 142 8 130 6.07e-42 149
MS.gene00108.t1 AT5G10280 55.652 115 51 0 20 134 8 122 8.53e-42 148
MS.gene00108.t1 AT1G34670 50.746 134 65 1 20 153 8 140 1.05e-41 149
MS.gene00108.t1 AT3G01140 52.033 123 59 0 20 142 51 173 1.68e-41 149
MS.gene00108.t1 AT5G14340 56.522 115 50 0 20 134 20 134 1.90e-41 145
MS.gene00108.t1 AT1G35515 61.165 103 40 0 24 126 12 114 2.19e-41 144
MS.gene00108.t1 AT4G09460 62.376 101 38 0 26 126 14 114 2.76e-41 144
MS.gene00108.t1 AT1G09540 55.172 116 52 0 24 139 12 127 3.34e-41 147
MS.gene00108.t1 AT1G18570 60.377 106 42 0 21 126 10 115 3.46e-41 147
MS.gene00108.t1 AT4G22680 52.500 120 57 0 20 139 8 127 3.49e-41 145
MS.gene00108.t1 AT5G07690 58.252 103 43 0 24 126 12 114 6.52e-41 146
MS.gene00108.t1 AT4G12350 52.500 120 57 0 20 139 8 127 7.55e-41 144
MS.gene00108.t1 AT2G16720 61.165 103 40 0 24 126 12 114 8.79e-41 144
MS.gene00108.t1 AT3G53200 60.377 106 42 0 21 126 6 111 9.47e-41 142
MS.gene00108.t1 AT5G40350 84.507 71 11 0 57 127 5 75 1.02e-40 140
MS.gene00108.t1 AT4G38620 62.376 101 38 0 26 126 14 114 1.27e-40 144
MS.gene00108.t1 AT1G57560 60.194 103 41 0 24 126 12 114 1.32e-40 144
MS.gene00108.t1 AT2G47460 59.813 107 43 0 20 126 8 114 1.41e-40 146
MS.gene00108.t1 AT1G57560 60.194 103 41 0 24 126 12 114 1.50e-40 143
MS.gene00108.t1 AT5G40330 53.509 114 53 0 13 126 1 114 1.56e-40 141
MS.gene00108.t1 AT3G13890 56.311 103 45 0 24 126 12 114 1.57e-40 145
MS.gene00108.t1 AT1G79180 54.955 111 50 0 20 130 10 120 1.91e-40 144
MS.gene00108.t1 AT5G07700 57.282 103 44 0 24 126 12 114 1.97e-40 145
MS.gene00108.t1 AT5G07700 57.282 103 44 0 24 126 12 114 1.97e-40 145
MS.gene00108.t1 AT5G14750 56.731 104 45 0 23 126 15 118 2.01e-40 140
MS.gene00108.t1 AT5G61420 57.282 103 44 0 24 126 12 114 3.90e-40 144
MS.gene00108.t1 AT1G06180 52.893 121 57 0 20 140 8 128 4.67e-40 141
MS.gene00108.t1 AT1G66230 52.174 115 55 0 20 134 8 122 5.91e-40 142
MS.gene00108.t1 AT3G47600 51.282 117 55 1 20 134 8 124 6.83e-40 143
MS.gene00108.t1 AT3G11440 54.369 103 47 0 24 126 41 143 6.99e-40 146
MS.gene00108.t1 AT5G26660 54.955 111 50 0 24 134 12 122 7.86e-40 143
MS.gene00108.t1 AT1G56160 57.009 107 46 0 20 126 10 116 7.97e-40 142
MS.gene00108.t1 AT3G61250 50.833 120 59 0 20 139 8 127 8.47e-40 142
MS.gene00108.t1 AT2G31180 57.944 107 45 0 20 126 8 114 8.77e-40 140
MS.gene00108.t1 AT5G60890 55.652 115 51 0 21 135 9 123 1.08e-39 142
MS.gene00108.t1 AT5G16600 52.174 115 55 0 20 134 8 122 1.10e-39 142
MS.gene00108.t1 AT3G27920 56.731 104 45 0 23 126 13 116 1.61e-39 139
MS.gene00108.t1 AT4G26930 55.140 107 48 0 24 130 19 125 1.96e-39 143
MS.gene00108.t1 AT3G11440 52.830 106 50 0 24 129 41 146 3.70e-39 145
MS.gene00108.t1 AT3G11440 52.830 106 50 0 24 129 41 146 3.70e-39 145
MS.gene00108.t1 AT3G11440 52.830 106 50 0 24 129 41 146 3.70e-39 145
MS.gene00108.t1 AT5G49330 57.944 107 45 0 20 126 8 114 4.69e-39 141
MS.gene00108.t1 AT5G35550 61.538 104 40 0 23 126 13 116 4.93e-39 139
MS.gene00108.t1 AT5G06100 53.774 106 49 0 24 129 32 137 5.35e-39 143
MS.gene00108.t1 AT4G17785 35.521 259 145 6 19 266 8 255 7.14e-39 141
MS.gene00108.t1 AT1G63910 56.075 107 47 0 24 130 12 118 7.95e-39 141
MS.gene00108.t1 AT3G62610 57.009 107 46 0 20 126 8 114 9.46e-39 140
MS.gene00108.t1 AT4G17785 35.521 259 145 6 19 266 8 255 1.05e-38 140
MS.gene00108.t1 AT3G08500 58.491 106 44 0 24 129 30 135 1.41e-38 140
MS.gene00108.t1 AT2G32460 51.887 106 51 0 24 129 18 123 2.01e-38 142
MS.gene00108.t1 AT2G32460 51.887 106 51 0 24 129 6 111 2.08e-38 142
MS.gene00108.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.11e-38 143
MS.gene00108.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.11e-38 143
MS.gene00108.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.11e-38 143
MS.gene00108.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.11e-38 143
MS.gene00108.t1 AT5G62320 48.872 133 61 1 20 145 9 141 3.08e-38 136
MS.gene00108.t1 AT5G55020 51.327 113 55 0 18 130 20 132 5.07e-38 142
MS.gene00108.t1 AT5G62470 50.000 112 56 0 20 131 8 119 9.71e-38 138
MS.gene00108.t1 AT5G52600 56.311 103 45 0 24 126 12 114 1.09e-37 134
MS.gene00108.t1 AT1G74080 57.282 103 44 0 24 126 12 114 1.10e-37 137
MS.gene00108.t1 AT5G12870 51.852 108 52 0 24 131 18 125 1.26e-37 135
MS.gene00108.t1 AT3G13890 51.786 112 45 1 24 126 12 123 1.67e-37 137
MS.gene00108.t1 AT1G08810 46.032 126 68 0 20 145 8 133 1.84e-37 135
MS.gene00108.t1 AT1G74650 49.558 113 57 0 20 132 8 120 1.95e-37 136
MS.gene00108.t1 AT3G12720 51.456 103 50 0 24 126 22 124 2.89e-37 135
MS.gene00108.t1 AT4G01680 56.311 103 45 0 24 126 12 114 4.12e-37 133
MS.gene00108.t1 AT4G01680 54.717 106 48 0 24 129 12 117 7.52e-37 135
MS.gene00108.t1 AT2G26960 50.442 113 52 1 18 126 10 122 2.96e-36 135
MS.gene00108.t1 AT3G28910 49.565 115 58 0 20 134 8 122 6.71e-36 132
MS.gene00108.t1 AT5G62470 50.000 112 55 1 20 131 8 118 8.62e-36 132
MS.gene00108.t1 AT4G37780 53.704 108 49 1 20 126 8 115 8.77e-36 131
MS.gene00108.t1 AT5G56110 49.593 123 61 1 23 144 11 133 4.03e-35 130
MS.gene00108.t1 AT1G74430 53.398 103 48 0 24 126 12 114 4.61e-35 129
MS.gene00108.t1 AT4G25560 53.922 102 47 0 25 126 11 112 5.44e-35 129
MS.gene00108.t1 AT3G49690 53.704 108 49 1 20 126 8 115 1.33e-34 129
MS.gene00108.t1 AT3G12820 53.271 107 50 0 20 126 10 116 1.53e-34 126
MS.gene00108.t1 AT3G48920 50.980 102 50 0 25 126 19 120 1.85e-34 127
MS.gene00108.t1 AT5G57620 52.778 108 50 1 20 126 8 115 2.48e-34 128
MS.gene00108.t1 AT3G28470 50.485 103 51 0 20 122 8 110 2.62e-34 128
MS.gene00108.t1 AT5G52260 55.882 102 45 0 25 126 13 114 3.54e-34 126
MS.gene00108.t1 AT5G23000 51.852 108 51 1 20 126 8 115 3.54e-34 128
MS.gene00108.t1 AT1G79180 42.361 144 50 1 20 130 10 153 6.20e-34 127
MS.gene00108.t1 AT2G36890 53.704 108 49 1 20 126 8 115 9.17e-34 126
MS.gene00108.t1 AT5G65790 48.000 125 60 2 20 143 8 128 1.12e-33 127
MS.gene00108.t1 AT2G36890 53.704 108 49 1 20 126 49 156 1.84e-33 126
MS.gene00108.t1 AT4G01680 49.153 118 48 1 24 129 12 129 1.85e-33 126
MS.gene00108.t1 AT3G46130 64.634 82 29 0 55 136 8 89 3.63e-33 122
MS.gene00108.t1 AT5G59780 68.421 76 24 0 57 132 20 95 8.04e-33 121
MS.gene00108.t1 AT3G46130 66.250 80 27 0 57 136 20 99 1.12e-32 121
MS.gene00108.t1 AT1G66370 50.000 110 55 0 24 133 8 117 2.67e-32 120
MS.gene00108.t1 AT3G60460 44.545 110 60 1 23 131 10 119 8.55e-32 121
MS.gene00108.t1 AT1G18710 49.515 103 52 0 24 126 12 114 6.31e-31 117
MS.gene00108.t1 AT3G53200 67.143 70 23 0 57 126 9 78 3.47e-29 111
MS.gene00108.t1 AT1G66380 53.398 103 48 0 24 126 8 110 4.15e-28 106
MS.gene00108.t1 AT1G56650 40.116 172 101 2 24 195 8 177 4.42e-28 109
MS.gene00108.t1 AT5G26660 58.974 78 32 0 57 134 14 91 2.98e-27 109
MS.gene00108.t1 AT1G66390 53.398 103 48 0 24 126 8 110 5.93e-27 107
MS.gene00108.t1 AT5G35550 63.158 76 28 0 51 126 44 119 1.50e-26 106
MS.gene00108.t1 AT3G47600 57.500 80 32 1 57 134 39 118 8.57e-26 105
MS.gene00108.t1 AT5G11050 38.519 135 75 3 26 154 105 237 1.20e-25 106
MS.gene00108.t1 AT2G26950 39.640 111 63 1 17 123 5 115 2.16e-25 105
MS.gene00108.t1 AT5G11510 43.269 104 58 1 23 126 78 180 2.76e-25 107
MS.gene00108.t1 AT5G11510 43.269 104 58 1 23 126 78 180 2.76e-25 107
MS.gene00108.t1 AT5G11510 43.269 104 58 1 23 126 78 180 2.76e-25 107
MS.gene00108.t1 AT5G11510 43.269 104 58 1 23 126 78 180 3.38e-25 106
MS.gene00108.t1 AT5G11510 43.269 104 58 1 23 126 78 180 3.40e-25 106
MS.gene00108.t1 AT3G09370 41.121 107 62 1 23 129 132 237 7.96e-25 105
MS.gene00108.t1 AT3G09370 41.121 107 62 1 23 129 127 232 8.06e-25 105
MS.gene00108.t1 AT3G09370 41.121 107 62 1 23 129 140 245 1.03e-24 104
MS.gene00108.t1 AT5G14750 62.687 67 25 0 60 126 18 84 1.32e-24 98.6
MS.gene00108.t1 AT3G12820 64.179 67 24 0 60 126 2 68 1.47e-24 99.0
MS.gene00108.t1 AT5G58850 38.525 122 68 2 23 138 102 222 2.23e-24 103
MS.gene00108.t1 AT3G27785 41.667 108 61 2 26 132 189 295 2.35e-24 103
MS.gene00108.t1 AT5G02320 41.346 104 60 1 23 126 124 226 2.85e-24 103
MS.gene00108.t1 AT5G02320 41.346 104 60 1 23 126 124 226 2.85e-24 103
MS.gene00108.t1 AT5G02320 41.346 104 60 1 23 126 64 166 5.50e-24 102
MS.gene00108.t1 AT4G18770 40.000 110 65 1 24 133 215 323 6.57e-24 101
MS.gene00108.t1 AT2G23290 42.593 108 61 1 21 128 8 114 1.20e-23 99.4
MS.gene00108.t1 AT4G32730 38.462 104 63 1 23 126 84 186 9.44e-23 99.8
MS.gene00108.t1 AT4G32730 38.462 104 63 1 23 126 84 186 9.44e-23 99.8
MS.gene00108.t1 AT4G32730 38.462 104 63 1 23 126 84 186 9.44e-23 99.8
MS.gene00108.t1 AT4G32730 38.462 104 63 1 23 126 84 186 9.44e-23 99.8
MS.gene00108.t1 AT4G32730 38.462 104 63 1 23 126 84 186 1.05e-22 99.4
MS.gene00108.t1 AT4G37260 39.823 113 62 2 26 138 13 119 4.84e-22 95.1
MS.gene00108.t1 AT5G67300 33.974 156 94 3 23 178 3 149 8.56e-22 94.0
MS.gene00108.t1 AT2G39880 38.971 136 79 3 26 160 50 182 1.00e-21 94.7
MS.gene00108.t1 AT3G55730 40.566 106 62 1 26 131 56 160 2.46e-21 94.0
MS.gene00108.t1 AT3G09230 43.269 104 58 1 23 126 52 154 6.24e-21 92.8
MS.gene00108.t1 AT1G69560 40.000 105 62 1 26 130 107 210 6.34e-21 92.0
MS.gene00108.t1 AT1G69560 40.000 105 62 1 26 130 123 226 6.76e-21 92.0
MS.gene00108.t1 AT1G17950 41.905 105 60 1 26 130 5 108 7.25e-21 90.5
MS.gene00108.t1 AT3G29020 40.000 105 62 1 26 130 65 168 9.69e-21 89.7
MS.gene00108.t1 AT1G26780 39.252 107 64 1 24 130 96 201 1.20e-20 91.7
MS.gene00108.t1 AT3G29020 40.000 105 62 1 26 130 67 170 1.21e-20 90.9
MS.gene00108.t1 AT1G26780 42.424 99 56 1 24 122 96 193 1.92e-20 89.7
MS.gene00108.t1 AT5G17800 40.541 111 59 2 26 130 93 202 2.05e-20 90.5
MS.gene00108.t1 AT5G40360 36.364 110 68 2 24 132 156 264 5.49e-20 89.7
MS.gene00108.t1 AT3G50060 37.736 106 65 1 23 128 3 107 8.46e-20 88.6
MS.gene00108.t1 AT1G22640 56.338 71 31 0 70 140 1 71 8.90e-20 86.3
MS.gene00108.t1 AT1G73410 42.857 105 59 1 26 130 6 109 1.18e-19 87.0
MS.gene00108.t1 AT2G25230 40.566 106 59 2 23 125 23 127 2.34e-19 85.9
MS.gene00108.t1 AT1G73410 42.857 105 59 1 26 130 6 109 2.58e-19 85.1
MS.gene00108.t1 AT3G23250 35.537 121 74 1 70 190 1 117 2.82e-19 85.5
MS.gene00108.t1 AT1G66380 58.571 70 29 0 57 126 8 77 1.40e-18 80.1
MS.gene00108.t1 AT4G33450 38.679 106 64 1 25 130 18 122 1.89e-18 83.6
MS.gene00108.t1 AT5G39700 38.889 108 65 1 15 122 45 151 3.77e-18 81.6
MS.gene00108.t1 AT5G59780 66.667 51 17 0 82 132 1 51 4.26e-18 80.9
MS.gene00108.t1 AT3G46130 63.636 55 20 0 82 136 1 55 5.54e-18 81.3
MS.gene00108.t1 AT1G71030 39.000 100 60 1 48 147 5 103 1.95e-17 79.7
MS.gene00108.t1 AT1G14350 40.594 101 59 1 29 129 28 127 2.85e-17 82.4
MS.gene00108.t1 AT1G14350 40.594 101 59 1 29 129 28 127 2.85e-17 82.4
MS.gene00108.t1 AT2G37630 35.780 109 68 1 26 132 4 112 3.49e-17 82.0
MS.gene00108.t1 AT5G14750 57.895 57 24 0 70 126 1 57 3.58e-17 77.4
MS.gene00108.t1 AT5G14750 57.895 57 24 0 70 126 1 57 3.58e-17 77.4
MS.gene00108.t1 AT1G71030 42.353 85 49 0 63 147 5 89 3.77e-17 78.6
MS.gene00108.t1 AT1G66380 50.794 63 31 0 24 86 8 70 7.72e-17 75.5
MS.gene00108.t1 AT2G02820 33.333 162 93 4 15 166 17 173 1.14e-16 80.9
MS.gene00108.t1 AT2G02820 33.333 162 93 4 15 166 17 173 1.25e-16 80.9
MS.gene00108.t1 AT4G00540 36.036 111 67 2 24 131 101 210 1.34e-16 80.5
MS.gene00108.t1 AT4G00540 36.036 111 67 2 24 131 99 208 2.36e-16 79.7
MS.gene00108.t1 AT2G02820 33.333 162 93 4 15 166 17 173 3.12e-16 78.6
MS.gene00108.t1 AT1G18960 32.110 109 71 2 26 134 10 115 3.81e-16 78.2
MS.gene00108.t1 AT5G40430 36.792 106 62 3 23 125 51 154 3.97e-15 74.3
MS.gene00108.t1 AT4G25560 60.000 45 18 0 82 126 2 46 9.72e-13 67.0
MS.gene00108.t1 AT1G14350 44.444 63 35 0 68 130 23 85 6.47e-11 63.2
MS.gene00108.t1 AT1G14350 44.444 63 35 0 68 130 23 85 6.47e-11 63.2

Find 86 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTAAGTATTGTGCAATTT+TGG 0.168994 2.1:+59284099 None:intergenic
TGTTGGTAATAATCAGAATT+AGG 0.176139 2.1:+59283608 None:intergenic
TACCAACAAGCTCAGCAATT+TGG 0.199585 2.1:-59283593 MS.gene00108:CDS
GGGACGCATCTGACAATTTC+TGG 0.215052 2.1:-59283484 MS.gene00108:CDS
ATCTCGTTGTCTGTTCTTCC+CGG 0.266163 2.1:+59284079 None:intergenic
ACAACGAGATCAAGAATTAT+TGG 0.314777 2.1:-59284066 MS.gene00108:CDS
CCTTGAATCCAAGGAGTGTT+TGG 0.318256 2.1:+59283506 None:intergenic
ACCAACAAGCTCAGCAATTT+GGG 0.318446 2.1:-59283592 MS.gene00108:CDS
GCTGCATCATCGGATTCATT+TGG 0.322005 2.1:-59283707 MS.gene00108:CDS
GGTGGCTCGGGTGGCGGAGG+TGG 0.323196 2.1:+59283922 None:intergenic
TGGCGCCGCGGCTGCATCAT+CGG 0.345089 2.1:-59283717 MS.gene00108:CDS
GTTGGTAATAATCAGAATTA+GGG 0.353037 2.1:+59283609 None:intergenic
ATCTGGATTGTTCCCTCAAA+TGG 0.353663 2.1:-59283546 MS.gene00108:CDS
CCTTTGGATGCCAAGGTTAG+TGG 0.355811 2.1:-59283966 MS.gene00108:CDS
TACGTCACATTTGAGTTGTT+TGG 0.355884 2.1:+59284021 None:intergenic
TTCATAGTCGTTGGGGAAAC+CGG 0.357053 2.1:-59284400 MS.gene00108:intron
CGAGCCACCGCCACTAATAA+TGG 0.357709 2.1:-59283908 MS.gene00108:CDS
CAAAATTGCACAATACTTAC+CGG 0.367480 2.1:-59284098 MS.gene00108:CDS
ATGTTACCACGACGAACATC+TGG 0.367650 2.1:+59284455 None:intergenic
GATTGCATCACTAGCCCATC+TGG 0.373109 2.1:-59283563 MS.gene00108:CDS
CTGCATCATCGGATTCATTT+GGG 0.373323 2.1:-59283706 MS.gene00108:CDS
GGCGGTGGCTCGGGTGGCGG+AGG 0.377228 2.1:+59283919 None:intergenic
AAGATGCCATGCGCTACCTT+TGG 0.397038 2.1:-59283982 MS.gene00108:CDS
CATTATTAGTGGCGGTGGCT+CGG 0.400688 2.1:+59283909 None:intergenic
ACCCAAATTGCTGAGCTTGT+TGG 0.406996 2.1:+59283591 None:intergenic
TGTTGGTGTTCATAATTGTT+GGG 0.412586 2.1:+59283792 None:intergenic
CCAAGGAGTGTTTGGTTCCA+TGG 0.416961 2.1:+59283514 None:intergenic
CCAAACACTCCTTGGATTCA+AGG 0.418970 2.1:-59283506 MS.gene00108:CDS
TTCTTGAACTTCATAGTCGT+TGG 0.421499 2.1:-59284409 MS.gene00108:CDS
TCTTGAACTTCATAGTCGTT+GGG 0.421944 2.1:-59284408 MS.gene00108:CDS
ATCAATTACATTGCAAATCA+TGG 0.428806 2.1:-59285162 MS.gene00108:CDS
TCGGGTGGCGGAGGTGGATG+CGG 0.434916 2.1:+59283928 None:intergenic
AGTGGCGGTGGCTCGGGTGG+CGG 0.441443 2.1:+59283916 None:intergenic
ATTATTAGTGGCGGTGGCTC+GGG 0.451809 2.1:+59283910 None:intergenic
GTTATAGGACTCAAACGAAC+TGG 0.452310 2.1:-59284515 MS.gene00108:intron
ATTTCAATATTTCATGGAAG+TGG 0.456263 2.1:-59285286 None:intergenic
TATTGTTGTTACTACCAACT+TGG 0.458463 2.1:+59283636 None:intergenic
CCATGGAACCAAACACTCCT+TGG 0.463876 2.1:-59283514 MS.gene00108:CDS
TCTTGAGTCAATTCCGAGAC+AGG 0.470088 2.1:+59283671 None:intergenic
CGGAGGTGGATGCGGCAGCT+TGG 0.476078 2.1:+59283936 None:intergenic
TATGTTATATGTCGTATTGT+TGG 0.476207 2.1:+59283856 None:intergenic
TCAAATGGATTTCAGTTCCA+TGG 0.479194 2.1:-59283531 MS.gene00108:CDS
ACTTGGTGAACCATTATTAG+TGG 0.482800 2.1:+59283898 None:intergenic
CTGTTGGTGTTCATAATTGT+TGG 0.485187 2.1:+59283791 None:intergenic
AACACTCTTGCTCGTTCAGC+TGG 0.485635 2.1:-59285126 MS.gene00108:intron
GACACAAGTTTCGCCTGTCT+CGG 0.486609 2.1:-59283684 MS.gene00108:CDS
GCGCCATTGCTACTATTCTC+TGG 0.490228 2.1:+59283734 None:intergenic
ATGAACACCAACAGTTTATG+TGG 0.492470 2.1:-59283782 MS.gene00108:CDS
ATGGAACTGAAATCCATTTG+AGG 0.515326 2.1:+59283533 None:intergenic
GTTATATGTCGTATTGTTGG+TGG 0.520096 2.1:+59283859 None:intergenic
TGAACCATTATTAGTGGCGG+TGG 0.522243 2.1:+59283904 None:intergenic
CAAATCATGGTGAAGGTCGA+TGG 0.524948 2.1:-59285149 MS.gene00108:CDS
TGGAACTGAAATCCATTTGA+GGG 0.531486 2.1:+59283534 None:intergenic
TGCGCTACCTTTGGATGCCA+AGG 0.532069 2.1:-59283973 MS.gene00108:CDS
CAAACACTCCTTGGATTCAA+GGG 0.533991 2.1:-59283505 MS.gene00108:CDS
AGATCTTCATCGACGGTCCA+TGG 0.536902 2.1:+59285192 None:intergenic
ATTAGTGGCGGTGGCTCGGG+TGG 0.538647 2.1:+59283913 None:intergenic
GATTATTACAATGTCCAAGT+TGG 0.548318 2.1:-59283650 MS.gene00108:CDS
CTTGAACTTCATAGTCGTTG+GGG 0.553574 2.1:-59284407 MS.gene00108:CDS
TACATTGCAAATCATGGTGA+AGG 0.554565 2.1:-59285156 MS.gene00108:CDS
CTCATCATCACTCTGGAGCA+TGG 0.561518 2.1:+59285233 None:intergenic
CAATATTTCATGGAAGTGGA+AGG 0.568241 2.1:-59285282 None:intergenic
GATGCGTCCCCTTGAATCCA+AGG 0.570624 2.1:+59283497 None:intergenic
GATCCAACTCATCATCACTC+TGG 0.572701 2.1:+59285226 None:intergenic
CCACTAACCTTGGCATCCAA+AGG 0.583224 2.1:+59283966 None:intergenic
GCTCCAGAGTGATGATGAGT+TGG 0.590773 2.1:-59285229 MS.gene00108:CDS
TGGATGCGCTCCACTAACCT+TGG 0.601618 2.1:+59283956 None:intergenic
ACTAATAATGGTTCACCAAG+TGG 0.601663 2.1:-59283896 MS.gene00108:CDS
GTTGGTGTTCATAATTGTTG+GGG 0.602853 2.1:+59283793 None:intergenic
ACTCCAGAGAATAGTAGCAA+TGG 0.604297 2.1:-59283737 MS.gene00108:CDS
ATTTGAGGGAACAATCCAGA+TGG 0.604631 2.1:+59283548 None:intergenic
TGAATCCGATGATGCAGCCG+CGG 0.612957 2.1:+59283712 None:intergenic
TGGCATCCAAAGGTAGCGCA+TGG 0.621698 2.1:+59283976 None:intergenic
GTGACCGCTGTTGTACCACT+TGG 0.627383 2.1:+59283881 None:intergenic
AAAATTGCACAATACTTACC+GGG 0.631573 2.1:-59284097 MS.gene00108:CDS
TGGATCTTCGAAGAGGACCA+TGG 0.638658 2.1:-59285209 MS.gene00108:CDS
TTTGAGGGAACAATCCAGAT+GGG 0.640469 2.1:+59283549 None:intergenic
TGGTGAACCATTATTAGTGG+CGG 0.649612 2.1:+59283901 None:intergenic
GAGAGCAAGATCTTCATCGA+CGG 0.650210 2.1:+59285185 None:intergenic
AAACACTCCTTGGATTCAAG+GGG 0.650871 2.1:-59283504 MS.gene00108:CDS
GAATAGTAGCAATGGCGCCG+CGG 0.659766 2.1:-59283729 MS.gene00108:CDS
CTTCGTCCAGATGTTCGTCG+TGG 0.664020 2.1:-59284461 MS.gene00108:CDS
GCAAGAGCTGTAGATTGAGA+TGG 0.670049 2.1:-59284493 MS.gene00108:CDS
ATGTGAACCACATAAACTGT+TGG 0.680313 2.1:+59283775 None:intergenic
GATGAGTTGGATCTTCGAAG+AGG 0.682976 2.1:-59285216 MS.gene00108:CDS
TTCACCAAGTGGTACAACAG+CGG 0.730136 2.1:-59283885 MS.gene00108:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAACTATATATTATATTA+TGG - chr2.1:59283663-59283682 MS.gene00108:CDS 10.0%
!!! TTTTTTACTTTATTTAATAC+GGG + chr2.1:59284097-59284116 None:intergenic 10.0%
!! AAAAACAAAATTTCTTCAAT+TGG + chr2.1:59284174-59284193 None:intergenic 15.0%
!!! AGAAATTTTGTTTTTGTTAT+AGG - chr2.1:59284179-59284198 MS.gene00108:intron 15.0%
!!! GTATATTTTTCTAGTTTTTA+TGG - chr2.1:59283631-59283650 MS.gene00108:CDS 15.0%
!!! TCTTTCTAATTTTAAAATGT+TGG - chr2.1:59284540-59284559 MS.gene00108:intron 15.0%
!!! TTTCTGTCTTTAATTTATTT+TGG - chr2.1:59284509-59284528 MS.gene00108:CDS 15.0%
!! ATGAAATACCATATAACTAT+AGG - chr2.1:59283976-59283995 MS.gene00108:CDS 20.0%
!! CAATTAGAATAGTTAAGTTA+TGG - chr2.1:59284387-59284406 MS.gene00108:intron 20.0%
!! CTAGTTAATTTCTATAATTG+TGG - chr2.1:59283772-59283791 MS.gene00108:CDS 20.0%
!! GGGCATAAATAAATTAATTA+TGG - chr2.1:59283951-59283970 MS.gene00108:CDS 20.0%
!! TATTTGATTGATCAATTAGA+TGG - chr2.1:59284586-59284605 MS.gene00108:intron 20.0%
! AAATACCATATAACTATAGG+TGG - chr2.1:59283979-59283998 MS.gene00108:CDS 25.0%
! ATCAATTACATTGCAAATCA+TGG - chr2.1:59283547-59283566 MS.gene00108:CDS 25.0%
! CTAACATAATCACTATCATA+TGG + chr2.1:59283891-59283910 None:intergenic 25.0%
! CTAATATTTAACGACGAATT+TGG + chr2.1:59284458-59284477 None:intergenic 25.0%
! TATGTTATATGTCGTATTGT+TGG + chr2.1:59284856-59284875 None:intergenic 25.0%
!!! GCTTTTTCCAAAAAATTGAT+TGG + chr2.1:59283836-59283855 None:intergenic 25.0%
!!! GTTGGTAATAATCAGAATTA+GGG + chr2.1:59285103-59285122 None:intergenic 25.0%
!!! TGTTGGTAATAATCAGAATT+AGG + chr2.1:59285104-59285123 None:intergenic 25.0%
AAAATTGCACAATACTTACC+GGG - chr2.1:59284612-59284631 MS.gene00108:intron 30.0%
AAGAAAAAAACCGCAAACTT+TGG + chr2.1:59283858-59283877 None:intergenic 30.0%
ACAACGAGATCAAGAATTAT+TGG - chr2.1:59284643-59284662 MS.gene00108:intron 30.0%
CAAAATTGCACAATACTTAC+CGG - chr2.1:59284611-59284630 MS.gene00108:intron 30.0%
GATTATTACAATGTCCAAGT+TGG - chr2.1:59285059-59285078 MS.gene00108:intron 30.0%
TATGCCTTATATTAAAGTCC+TGG + chr2.1:59283914-59283933 None:intergenic 30.0%
TTAGCCAGGACTTTAATATA+AGG - chr2.1:59283907-59283926 MS.gene00108:CDS 30.0%
TTCATGATTGCAATTGTTGA+TGG - chr2.1:59283700-59283719 MS.gene00108:CDS 30.0%
! TATTGTTGTTACTACCAACT+TGG + chr2.1:59285076-59285095 None:intergenic 30.0%
! TGTTGGTGTTCATAATTGTT+GGG + chr2.1:59284920-59284939 None:intergenic 30.0%
!!! CATCACACCAATCAATTTTT+TGG - chr2.1:59283826-59283845 MS.gene00108:CDS 30.0%
ACTAATAATGGTTCACCAAG+TGG - chr2.1:59284813-59284832 MS.gene00108:intron 35.0%
ATGAACACCAACAGTTTATG+TGG - chr2.1:59284927-59284946 MS.gene00108:intron 35.0%
ATGGAACTGAAATCCATTTG+AGG + chr2.1:59285179-59285198 None:intergenic 35.0%
ATGTGAACCACATAAACTGT+TGG + chr2.1:59284937-59284956 None:intergenic 35.0%
CAATCATGAAACAGCTATAG+TGG + chr2.1:59283690-59283709 None:intergenic 35.0%
GCAGCCAAGCAATTATATAT+GGG + chr2.1:59284005-59284024 None:intergenic 35.0%
GTTATATGTCGTATTGTTGG+TGG + chr2.1:59284853-59284872 None:intergenic 35.0%
TACATTGCAAATCATGGTGA+AGG - chr2.1:59283553-59283572 MS.gene00108:CDS 35.0%
TCTTGAACTTCATAGTCGTT+GGG - chr2.1:59284301-59284320 MS.gene00108:intron 35.0%
TGCAGCCAAGCAATTATATA+TGG + chr2.1:59284006-59284025 None:intergenic 35.0%
TGCATGTATCTATTGCTTAC+CGG + chr2.1:59284331-59284350 None:intergenic 35.0%
TGGAACTGAAATCCATTTGA+GGG + chr2.1:59285178-59285197 None:intergenic 35.0%
TTCTTGAACTTCATAGTCGT+TGG - chr2.1:59284300-59284319 MS.gene00108:intron 35.0%
TTGGAAAAAGCCAAAGTTTG+CGG - chr2.1:59283845-59283864 MS.gene00108:CDS 35.0%
! ACTTGGTGAACCATTATTAG+TGG + chr2.1:59284814-59284833 None:intergenic 35.0%
! CATAGCGTTGAAGAAAATAG+TGG + chr2.1:59283740-59283759 None:intergenic 35.0%
! CTGTTGGTGTTCATAATTGT+TGG + chr2.1:59284921-59284940 None:intergenic 35.0%
! GTTGGTGTTCATAATTGTTG+GGG + chr2.1:59284919-59284938 None:intergenic 35.0%
! TCAAATGGATTTCAGTTCCA+TGG - chr2.1:59285178-59285197 MS.gene00108:CDS 35.0%
! TGAGTTGTTTGGCATGTTTT+TGG + chr2.1:59284680-59284699 None:intergenic 35.0%
! TGATAGTGATTATGTTAGCC+AGG - chr2.1:59283893-59283912 MS.gene00108:CDS 35.0%
!! CGGTAAGTATTGTGCAATTT+TGG + chr2.1:59284613-59284632 None:intergenic 35.0%
!! TACGTCACATTTGAGTTGTT+TGG + chr2.1:59284691-59284710 None:intergenic 35.0%
AAACACTCCTTGGATTCAAG+GGG - chr2.1:59285205-59285224 MS.gene00108:CDS 40.0%
AAGGCATATACTTCTGTGTG+TGG - chr2.1:59283926-59283945 MS.gene00108:CDS 40.0%
ACCAACAAGCTCAGCAATTT+GGG - chr2.1:59285117-59285136 MS.gene00108:intron 40.0%
ACTCCAGAGAATAGTAGCAA+TGG - chr2.1:59284972-59284991 MS.gene00108:intron 40.0%
ATATACTTCTGTGTGTGGTG+GGG - chr2.1:59283931-59283950 MS.gene00108:CDS 40.0%
ATCTGGATTGTTCCCTCAAA+TGG - chr2.1:59285163-59285182 MS.gene00108:CDS 40.0%
ATGGGCCACCTATAGTTATA+TGG + chr2.1:59283987-59284006 None:intergenic 40.0%
ATTTGAGGGAACAATCCAGA+TGG + chr2.1:59285164-59285183 None:intergenic 40.0%
CAAACACTCCTTGGATTCAA+GGG - chr2.1:59285204-59285223 MS.gene00108:CDS 40.0%
CATATACTTCTGTGTGTGGT+GGG - chr2.1:59283930-59283949 MS.gene00108:CDS 40.0%
CTGCATCATCGGATTCATTT+GGG - chr2.1:59285003-59285022 MS.gene00108:intron 40.0%
CTTGAACTTCATAGTCGTTG+GGG - chr2.1:59284302-59284321 MS.gene00108:intron 40.0%
GTGGCCCATATATAATTGCT+TGG - chr2.1:59283998-59284017 MS.gene00108:CDS 40.0%
GTTATAGGACTCAAACGAAC+TGG - chr2.1:59284194-59284213 MS.gene00108:intron 40.0%
TACCAACAAGCTCAGCAATT+TGG - chr2.1:59285116-59285135 MS.gene00108:intron 40.0%
TGAAACAAGACGAGAAGTGA+AGG + chr2.1:59283808-59283827 None:intergenic 40.0%
TGGTGAACCATTATTAGTGG+CGG + chr2.1:59284811-59284830 None:intergenic 40.0%
TTTGAGGGAACAATCCAGAT+GGG + chr2.1:59285163-59285182 None:intergenic 40.0%
!!! GTTTGGCATGTTTTTGGACA+CGG + chr2.1:59284674-59284693 None:intergenic 40.0%
!!! TTTGGCATGTTTTTGGACAC+GGG + chr2.1:59284673-59284692 None:intergenic 40.0%
ACCCAAATTGCTGAGCTTGT+TGG + chr2.1:59285121-59285140 None:intergenic 45.0%
ATCTCGTTGTCTGTTCTTCC+CGG + chr2.1:59284633-59284652 None:intergenic 45.0%
ATGTTACCACGACGAACATC+TGG + chr2.1:59284257-59284276 None:intergenic 45.0%
CAAATCATGGTGAAGGTCGA+TGG - chr2.1:59283560-59283579 MS.gene00108:CDS 45.0%
CCAAACACTCCTTGGATTCA+AGG - chr2.1:59285203-59285222 MS.gene00108:CDS 45.0%
GAGAGCAAGATCTTCATCGA+CGG + chr2.1:59283527-59283546 None:intergenic 45.0%
GATCCAACTCATCATCACTC+TGG + chr2.1:59283486-59283505 None:intergenic 45.0%
GCAAGAGCTGTAGATTGAGA+TGG - chr2.1:59284216-59284235 MS.gene00108:intron 45.0%
GCATATACTTCTGTGTGTGG+TGG - chr2.1:59283929-59283948 MS.gene00108:CDS 45.0%
GCTGCATCATCGGATTCATT+TGG - chr2.1:59285002-59285021 MS.gene00108:intron 45.0%
TCTTGAGTCAATTCCGAGAC+AGG + chr2.1:59285041-59285060 None:intergenic 45.0%
TGAACCATTATTAGTGGCGG+TGG + chr2.1:59284808-59284827 None:intergenic 45.0%
TTCACCAAGTGGTACAACAG+CGG - chr2.1:59284824-59284843 MS.gene00108:intron 45.0%
TTCATAGTCGTTGGGGAAAC+CGG - chr2.1:59284309-59284328 MS.gene00108:intron 45.0%
! GATGAGTTGGATCTTCGAAG+AGG - chr2.1:59283493-59283512 MS.gene00108:CDS 45.0%
!! CCTTGAATCCAAGGAGTGTT+TGG + chr2.1:59285206-59285225 None:intergenic 45.0%
!!! TTTTTTTACTTTATTTAATA+CGG + chr2.1:59284098-59284117 None:intergenic 5.0%
AACACTCTTGCTCGTTCAGC+TGG - chr2.1:59283583-59283602 MS.gene00108:CDS 50.0%
AAGATGCCATGCGCTACCTT+TGG - chr2.1:59284727-59284746 MS.gene00108:intron 50.0%
AGATCTTCATCGACGGTCCA+TGG + chr2.1:59283520-59283539 None:intergenic 50.0%
ATTATTAGTGGCGGTGGCTC+GGG + chr2.1:59284802-59284821 None:intergenic 50.0%
CATTATTAGTGGCGGTGGCT+CGG + chr2.1:59284803-59284822 None:intergenic 50.0%
CCACTAACCTTGGCATCCAA+AGG + chr2.1:59284746-59284765 None:intergenic 50.0%
CCATGGAACCAAACACTCCT+TGG - chr2.1:59285195-59285214 MS.gene00108:CDS 50.0%
CCTTTGGATGCCAAGGTTAG+TGG - chr2.1:59284743-59284762 MS.gene00108:intron 50.0%
GACACAAGTTTCGCCTGTCT+CGG - chr2.1:59285025-59285044 MS.gene00108:intron 50.0%
GATTGCATCACTAGCCCATC+TGG - chr2.1:59285146-59285165 MS.gene00108:CDS 50.0%
GCGCCATTGCTACTATTCTC+TGG + chr2.1:59284978-59284997 None:intergenic 50.0%
GGGACGCATCTGACAATTTC+TGG - chr2.1:59285225-59285244 MS.gene00108:CDS 50.0%
TGGATCTTCGAAGAGGACCA+TGG - chr2.1:59283500-59283519 MS.gene00108:CDS 50.0%
! GCTCCAGAGTGATGATGAGT+TGG - chr2.1:59283480-59283499 MS.gene00108:CDS 50.0%
!! CCAAGGAGTGTTTGGTTCCA+TGG + chr2.1:59285198-59285217 None:intergenic 50.0%
!! CTCATCATCACTCTGGAGCA+TGG + chr2.1:59283479-59283498 None:intergenic 50.0%
CGAGCCACCGCCACTAATAA+TGG - chr2.1:59284801-59284820 MS.gene00108:intron 55.0%
CTTCGTCCAGATGTTCGTCG+TGG - chr2.1:59284248-59284267 MS.gene00108:intron 55.0%
GAATAGTAGCAATGGCGCCG+CGG - chr2.1:59284980-59284999 MS.gene00108:intron 55.0%
GATGCGTCCCCTTGAATCCA+AGG + chr2.1:59285215-59285234 None:intergenic 55.0%
GTGACCGCTGTTGTACCACT+TGG + chr2.1:59284831-59284850 None:intergenic 55.0%
TGAATCCGATGATGCAGCCG+CGG + chr2.1:59285000-59285019 None:intergenic 55.0%
TGCGCTACCTTTGGATGCCA+AGG - chr2.1:59284736-59284755 MS.gene00108:intron 55.0%
TGGATGCGCTCCACTAACCT+TGG + chr2.1:59284756-59284775 None:intergenic 55.0%
TGGCATCCAAAGGTAGCGCA+TGG + chr2.1:59284736-59284755 None:intergenic 55.0%
! ATTAGTGGCGGTGGCTCGGG+TGG + chr2.1:59284799-59284818 None:intergenic 65.0%
CGGAGGTGGATGCGGCAGCT+TGG + chr2.1:59284776-59284795 None:intergenic 70.0%
TGGCGCCGCGGCTGCATCAT+CGG - chr2.1:59284992-59285011 MS.gene00108:intron 70.0%
!! TCGGGTGGCGGAGGTGGATG+CGG + chr2.1:59284784-59284803 None:intergenic 70.0%
! AGTGGCGGTGGCTCGGGTGG+CGG + chr2.1:59284796-59284815 None:intergenic 75.0%
!!! GGTGGCTCGGGTGGCGGAGG+TGG + chr2.1:59284790-59284809 None:intergenic 80.0%
!! GGCGGTGGCTCGGGTGGCGG+AGG + chr2.1:59284793-59284812 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 59283436 59285295 59283436 ID=MS.gene00108
chr2.1 mRNA 59283436 59285295 59283436 ID=MS.gene00108.t1;Parent=MS.gene00108
chr2.1 exon 59285127 59285295 59285127 ID=MS.gene00108.t1.exon1;Parent=MS.gene00108.t1
chr2.1 CDS 59285127 59285295 59285127 ID=cds.MS.gene00108.t1;Parent=MS.gene00108.t1
chr2.1 exon 59284401 59284530 59284401 ID=MS.gene00108.t1.exon2;Parent=MS.gene00108.t1
chr2.1 CDS 59284401 59284530 59284401 ID=cds.MS.gene00108.t1;Parent=MS.gene00108.t1
chr2.1 exon 59283436 59284126 59283436 ID=MS.gene00108.t1.exon3;Parent=MS.gene00108.t1
chr2.1 CDS 59283436 59284126 59283436 ID=cds.MS.gene00108.t1;Parent=MS.gene00108.t1
Gene Sequence

>MS.gene00108

ATGGAAGTGGAAGGAAGTGTAATAAGCAACTCGAACATCACCATGCTCCAGAGTGATGATGAGTTGGATCTTCGAAGAGGACCATGGACCGTCGATGAAGATCTTGCTCTCATCAATTACATTGCAAATCATGGTGAAGGTCGATGGAACACTCTTGCTCGTTCAGCTGGTAATTCATAACTTTTTTTCTTTCATGTATATTTTTCTAGTTTTTATGGAAGAATAATAAGAACTATATATTATATTATGGACCACTATAGCTGTTTCATGATTGCAATTGTTGATGGAAAATCATATACTTCCACTATTTTCTTCAACGCTATGCTTGATTTCTAGCTAGTTAATTTCTATAATTGTGGTGTGAAAGCTCCTTCACTTCTCGTCTTGTTTCATCACACCAATCAATTTTTTGGAAAAAGCCAAAGTTTGCGGTTTTTTTCTTATGAAGAGCACCATATGATAGTGATTATGTTAGCCAGGACTTTAATATAAGGCATATACTTCTGTGTGTGGTGGGGCATAAATAAATTAATTATGGAAATGAAATACCATATAACTATAGGTGGCCCATATATAATTGCTTGGCTGCATCACGTTTATGAAAATAGAAAAGAATAATGAATTTGAATTTGATACTACAACGCAATATCATATATTTCCCGTATTAAATAAAGTAAAAAAAATTTGCTCTTTATTTTACTTGATTTGTTTTTGCTTGCATTCTTGAAAACTTTACCAATTGAAGAAATTTTGTTTTTGTTATAGGACTCAAACGAACTGGCAAGAGCTGTAGATTGAGATGGTTGAATTATCTTCGTCCAGATGTTCGTCGTGGTAACATCACACTTGAAGAACAACTTCTTATTCTTGAACTTCATAGTCGTTGGGGAAACCGGTAAGCAATAGATACATGCATACAAACATACACATCAAAGTTATATTATTTTGTTGCAATTAGAATAGTTAAGTTATGGACTAAAATTTATTATTACAGAAAAAGAAGAAGAAAAAAAATCTTTCCAAATTCGTCGTTAAATATTAGAGACGCGAAATTAGAAATAAATTTCATTTTTTTTCTGTCTTTAATTTATTTTGGTAATTTAATCTTTCTAATTTTAAAATGTTGGTCAAATTATTGTGTCTAATTAATTATTTGATTGATCAATTAGATGGTCCAAAATTGCACAATACTTACCGGGAAGAACAGACAACGAGATCAAGAATTATTGGAGAACCCGTGTCCAAAAACATGCCAAACAACTCAAATGTGACGTAAACAGTAAGCAATTCAAAGATGCCATGCGCTACCTTTGGATGCCAAGGTTAGTGGAGCGCATCCAAGCTGCCGCATCCACCTCCGCCACCCGAGCCACCGCCACTAATAATGGTTCACCAAGTGGTACAACAGCGGTCACCACCAACAATACGACATATAACATAAACAACAATTTTGATGTTCATAGTAGCGCGAACATGTTAACCCCAACAATTATGAACACCAACAGTTTATGTGGTTCACATGTTACACAACGTTATACTCCAGAGAATAGTAGCAATGGCGCCGCGGCTGCATCATCGGATTCATTTGGGACACAAGTTTCGCCTGTCTCGGAATTGACTCAAGATTATTACAATGTCCAAGTTGGTAGTAACAACAATAATAACCCTAATTCTGATTATTACCAACAAGCTCAGCAATTTGGGTTTTTTGATTGCATCACTAGCCCATCTGGATTGTTCCCTCAAATGGATTTCAGTTCCATGGAACCAAACACTCCTTGGATTCAAGGGGACGCATCTGACAATTTCTGGAATGTTGAAAACATGTTGCTCTTTCAACATCTCAATGACAACATGTGA
Protein sequence

>MS.gene00108.t1

MEVEGSVISNSNITMLQSDDELDLRRGPWTVDEDLALINYIANHGEGRWNTLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAASTSATRATATNNGSPSGTTAVTTNNTTYNINNNFDVHSSANMLTPTIMNTNSLCGSHVTQRYTPENSSNGAAAASSDSFGTQVSPVSELTQDYYNVQVGSNNNNNPNSDYYQQAQQFGFFDCITSPSGLFPQMDFSSMEPNTPWIQGDASDNFWNVENMLLFQHLNDNM