Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001093.t1 | XP_024638141.1 | 95.6 | 707 | 30 | 1 | 1 | 706 | 1 | 707 | 0.00E+00 | 1396.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001093.t1 | Q9C810 | 52.6 | 709 | 286 | 20 | 2 | 688 | 3 | 683 | 1.1e-199 | 698.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001093.t1 | A0A396I2D4 | 95.6 | 707 | 30 | 1 | 1 | 706 | 1 | 707 | 0.0e+00 | 1396.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene001093.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001093.t1 | MTR_4g035550 | 95.467 | 706 | 31 | 1 | 1 | 705 | 1 | 706 | 0.0 | 1409 |
| MS.gene001093.t1 | MTR_1g076990 | 49.499 | 699 | 330 | 10 | 1 | 689 | 2 | 687 | 0.0 | 677 |
| MS.gene001093.t1 | MTR_1g076990 | 49.281 | 556 | 263 | 9 | 140 | 689 | 3 | 545 | 0.0 | 528 |
| MS.gene001093.t1 | MTR_1g076990 | 46.154 | 481 | 240 | 9 | 216 | 689 | 49 | 517 | 1.03e-136 | 413 |
| MS.gene001093.t1 | MTR_5g040700 | 32.320 | 625 | 346 | 19 | 84 | 670 | 76 | 661 | 1.54e-91 | 299 |
| MS.gene001093.t1 | MTR_5g077750 | 27.945 | 730 | 394 | 19 | 12 | 668 | 11 | 681 | 4.04e-86 | 286 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001093.t1 | AT1G33420 | 52.735 | 713 | 287 | 21 | 2 | 692 | 3 | 687 | 0.0 | 706 |
| MS.gene001093.t1 | AT1G33420 | 51.586 | 599 | 248 | 16 | 108 | 692 | 12 | 582 | 0.0 | 586 |
| MS.gene001093.t1 | AT5G22260 | 30.556 | 612 | 363 | 13 | 84 | 664 | 81 | 661 | 8.77e-87 | 287 |
| MS.gene001093.t1 | AT1G66170 | 27.454 | 703 | 400 | 19 | 12 | 664 | 11 | 653 | 8.00e-79 | 266 |
| MS.gene001093.t1 | AT2G01810 | 33.333 | 255 | 128 | 6 | 77 | 325 | 72 | 290 | 1.84e-35 | 143 |
| MS.gene001093.t1 | AT2G01810 | 27.083 | 336 | 195 | 11 | 352 | 664 | 374 | 682 | 5.91e-29 | 123 |
| MS.gene001093.t1 | AT2G07714 | 35.593 | 118 | 73 | 1 | 210 | 324 | 1 | 118 | 2.90e-22 | 95.5 |
| MS.gene001093.t1 | AT1G32810 | 41.270 | 63 | 34 | 1 | 616 | 678 | 22 | 81 | 4.86e-11 | 67.0 |
Find 175 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTGATATTATGGGTTTC+TGG | 0.093213 | 4.1:-65330510 | MS.gene001093:CDS |
| CTTACAGTCAAGAAGCTTTC+TGG | 0.134184 | 4.1:+65329509 | None:intergenic |
| GGTAATTGGGGTTATGAATT+TGG | 0.134330 | 4.1:-65330285 | MS.gene001093:CDS |
| GGTCACTTGCTTACTCTTAA+TGG | 0.146278 | 4.1:-65330562 | MS.gene001093:CDS |
| ATGGATTTGTCCAAGAAATT+TGG | 0.185371 | 4.1:-65330357 | MS.gene001093:CDS |
| GCTACCTTGCTTCAGATAAT+TGG | 0.200423 | 4.1:+65330782 | None:intergenic |
| GGCATTCATGGTATGGTAAT+TGG | 0.203027 | 4.1:-65330299 | MS.gene001093:CDS |
| TCTCTCTGGATCTGATATTA+TGG | 0.217498 | 4.1:-65330518 | MS.gene001093:CDS |
| TATTTCTCTTTACCAGTCTT+TGG | 0.220061 | 4.1:-65330142 | MS.gene001093:CDS |
| CTCTCTGGATCTGATATTAT+GGG | 0.236588 | 4.1:-65330517 | MS.gene001093:CDS |
| CCTGTAGTTTATTATGTTCA+TGG | 0.254361 | 4.1:-65330005 | MS.gene001093:CDS |
| CACCCATTTGGCCTCATTAC+AGG | 0.263526 | 4.1:+65329921 | None:intergenic |
| ATCAGAAATCACTTGCTCTT+TGG | 0.265036 | 4.1:+65329620 | None:intergenic |
| AATATAGACCAAAGATTAAT+AGG | 0.265549 | 4.1:-65329551 | MS.gene001093:CDS |
| TTTGTGCAGCTTTGTCTGTT+AGG | 0.268783 | 4.1:-65330480 | MS.gene001093:intron |
| ATAATCCAGCCCAAATTTCT+TGG | 0.276606 | 4.1:+65330347 | None:intergenic |
| GGTGATGGGTGGTCTTCTTT+AGG | 0.279988 | 4.1:+65329396 | None:intergenic |
| TTTAGCAGTCTCTGCACTCC+TGG | 0.291770 | 4.1:+65330047 | None:intergenic |
| GTGACAAGGCAAACTCTTAA+AGG | 0.292184 | 4.1:-65329901 | MS.gene001093:CDS |
| TTTCTGCCGCCGTGCCGTTC+CGG | 0.293735 | 4.1:-65331823 | MS.gene001093:CDS |
| GTAATTGGGGTTATGAATTT+GGG | 0.295494 | 4.1:-65330284 | MS.gene001093:CDS |
| TAGAACCAATTCCAACAAAA+AGG | 0.298710 | 4.1:+65330083 | None:intergenic |
| TTTGTAGCCGTGAAACTTCT+AGG | 0.308688 | 4.1:-65329273 | MS.gene001093:CDS |
| AGCGATATCACTTCATAATA+AGG | 0.310055 | 4.1:-65330864 | MS.gene001093:CDS |
| CGTTCCGGAACGGTGTTTAC+AGG | 0.311723 | 4.1:-65331808 | MS.gene001093:CDS |
| GCATTCATGGTATGGTAATT+GGG | 0.312049 | 4.1:-65330298 | MS.gene001093:CDS |
| CTTGTCCTCATTATCGTTCC+AGG | 0.340777 | 4.1:-65330196 | MS.gene001093:CDS |
| GTATACCCTAAAATTCCTTC+TGG | 0.348946 | 4.1:-65329226 | MS.gene001093:CDS |
| CATCTAGTGCTATTGAATTC+AGG | 0.352626 | 4.1:-65329768 | MS.gene001093:intron |
| GCAATAGAGCTTAATCCATT+AGG | 0.369000 | 4.1:+65329654 | None:intergenic |
| ATCTGATATTATGGGTTTCT+GGG | 0.378053 | 4.1:-65330509 | MS.gene001093:CDS |
| AGTTTGCCTTGTCACCCATT+TGG | 0.383313 | 4.1:+65329909 | None:intergenic |
| ATATTATGGGTTTCTGGGAT+AGG | 0.384205 | 4.1:-65330504 | MS.gene001093:CDS |
| TACCGAAGATGCATACAAAA+TGG | 0.385391 | 4.1:-65330244 | MS.gene001093:CDS |
| TGGATTTGTCCAAGAAATTT+GGG | 0.390776 | 4.1:-65330356 | MS.gene001093:CDS |
| GCCGTGAAACTTCTAGGATA+TGG | 0.393856 | 4.1:-65329267 | MS.gene001093:CDS |
| TGACAAGGCAAACTCTTAAA+GGG | 0.406437 | 4.1:-65329900 | MS.gene001093:CDS |
| GGTTATGAGGTCCTCGATCC+TGG | 0.408649 | 4.1:+65330178 | None:intergenic |
| GGTGGCTCGTCGCTTCTCTC+TGG | 0.410342 | 4.1:-65330532 | MS.gene001093:CDS |
| AGACTGAAGTCAAGAAGCTC+TGG | 0.412375 | 4.1:+65329853 | None:intergenic |
| CAATTGCCAGAGGGCATTCA+TGG | 0.418503 | 4.1:-65330311 | MS.gene001093:CDS |
| CTTCTGTTCCTCGCTCCATT+CGG | 0.419691 | 4.1:+65329139 | None:intergenic |
| ACTGTCAATTCCAGCACATC+TGG | 0.423348 | 4.1:+65329029 | None:intergenic |
| CATGTGATACCTGTGGTGTC+TGG | 0.429395 | 4.1:-65329059 | MS.gene001093:CDS |
| TGTGATCAATGTCGTGTTGT+TGG | 0.430361 | 4.1:-65331614 | MS.gene001093:intron |
| TATACCCTAAAATTCCTTCT+GGG | 0.437390 | 4.1:-65329225 | MS.gene001093:CDS |
| GGGGCAGTGGGTAGGCGTAT+TGG | 0.443315 | 4.1:-65329880 | MS.gene001093:CDS |
| CAGAAACATCTCCGGCGGTT+GGG | 0.443612 | 4.1:+65331840 | None:intergenic |
| AGATTGGCTCATGTGCCTAA+TGG | 0.445142 | 4.1:-65329669 | MS.gene001093:CDS |
| GCAAACTCTTAAAGGGGCAG+TGG | 0.450934 | 4.1:-65329893 | MS.gene001093:CDS |
| ACCATATCCTAGAAGTTTCA+CGG | 0.450976 | 4.1:+65329266 | None:intergenic |
| ATTAACTCAGGCGGTGGTGA+TGG | 0.451540 | 4.1:+65329381 | None:intergenic |
| TTGAACTTCAACTGTACCAT+TGG | 0.453345 | 4.1:+65329197 | None:intergenic |
| TGCCTTCAGCTCTTAAGATC+TGG | 0.455075 | 4.1:-65329443 | MS.gene001093:CDS |
| ATGTGTTTAATTTACAAGCC+TGG | 0.455360 | 4.1:+65328941 | None:intergenic |
| CGTGTTGGAGAGGTTGGTGA+TGG | 0.463438 | 4.1:-65331710 | MS.gene001093:CDS |
| CTTACTCTTAATGGAAAAGA+AGG | 0.464543 | 4.1:-65330553 | MS.gene001093:CDS |
| CAAGGGAAATCAGTTGCAAA+TGG | 0.466137 | 4.1:-65329820 | MS.gene001093:CDS |
| TCACTTGCTCTTTGGAAGGA+TGG | 0.470398 | 4.1:+65329628 | None:intergenic |
| TGACTGTAAGCAATTTATGA+AGG | 0.473976 | 4.1:-65329496 | MS.gene001093:CDS |
| CACCAGTGACTTCATTCAAT+AGG | 0.474466 | 4.1:+65329328 | None:intergenic |
| TGACTGCATTTGCGGTACTA+AGG | 0.475022 | 4.1:-65329106 | MS.gene001093:CDS |
| GTGCCTGTAATGAGGCCAAA+TGG | 0.478860 | 4.1:-65329924 | MS.gene001093:CDS |
| CATGGTGTTGTACATGCTAA+TGG | 0.479985 | 4.1:-65330589 | MS.gene001093:CDS |
| CATTTCTGCTGATGATCTTG+AGG | 0.481146 | 4.1:-65330656 | MS.gene001093:CDS |
| GTTGTACATGCTAATGGTTA+TGG | 0.485683 | 4.1:-65330583 | MS.gene001093:CDS |
| GTTCAGTTTCAGCCAAAGAC+TGG | 0.486581 | 4.1:+65330130 | None:intergenic |
| GATGGAGGTGATGTTTCGTC+TGG | 0.488976 | 4.1:-65331692 | MS.gene001093:CDS |
| CTGCTGATGATCTTGAGGAA+TGG | 0.489195 | 4.1:-65330651 | MS.gene001093:CDS |
| TGGAAGGTTGACTGCATTTG+CGG | 0.490118 | 4.1:-65329114 | MS.gene001093:CDS |
| GAAACCTGTAAACACCGTTC+CGG | 0.490501 | 4.1:+65331804 | None:intergenic |
| TTAGCAGTCTCTGCACTCCT+GGG | 0.490833 | 4.1:+65330048 | None:intergenic |
| AGGTGATGTTTCGTCTGGTT+TGG | 0.491601 | 4.1:-65331687 | MS.gene001093:CDS |
| CTCTTAAAGGGGCAGTGGGT+AGG | 0.492217 | 4.1:-65329888 | MS.gene001093:CDS |
| TGGCAGATCTTGTTTCGTGT+TGG | 0.492289 | 4.1:-65331725 | MS.gene001093:CDS |
| TGGGGTTATGAATTTGGGAC+TGG | 0.492477 | 4.1:-65330279 | MS.gene001093:CDS |
| CCATGAACATAATAAACTAC+AGG | 0.494448 | 4.1:+65330005 | None:intergenic |
| ACATCTCTTACATACAAACT+TGG | 0.497300 | 4.1:+65328990 | None:intergenic |
| ATGGGTGGTCTTCTTTAGGA+TGG | 0.498222 | 4.1:+65329400 | None:intergenic |
| TAGGGTATACACACGATCTC+GGG | 0.503961 | 4.1:+65329239 | None:intergenic |
| CTAAGGATGATGATGGAGAA+AGG | 0.503983 | 4.1:-65329089 | MS.gene001093:CDS |
| CGATGTTGAAGATGTGCAGC+AGG | 0.505393 | 4.1:-65329974 | MS.gene001093:CDS |
| GACTGAAGTCAAGAAGCTCT+GGG | 0.506399 | 4.1:+65329854 | None:intergenic |
| GCAGAAACATCTCCGGCGGT+TGG | 0.506827 | 4.1:+65331839 | None:intergenic |
| AGAGAAATAACAGACCGTAC+AGG | 0.507389 | 4.1:+65330156 | None:intergenic |
| TTAGGGTATACACACGATCT+CGG | 0.508674 | 4.1:+65329238 | None:intergenic |
| AAGAGGATGTTACGAGGTCC+AGG | 0.512781 | 4.1:-65331646 | MS.gene001093:CDS |
| TGGCTGCATACCAGATGTGC+TGG | 0.517639 | 4.1:-65329039 | MS.gene001093:CDS |
| TTGTTTCGTGTTGGAGAGGT+TGG | 0.522213 | 4.1:-65331716 | MS.gene001093:CDS |
| AATGGTACAGTTGAAGTTCA+AGG | 0.522348 | 4.1:-65329195 | MS.gene001093:CDS |
| GCCGCCGTGCCGTTCCGGAA+CGG | 0.526524 | 4.1:-65331818 | MS.gene001093:CDS |
| TTTGTCCAAGAAATTTGGGC+TGG | 0.528223 | 4.1:-65330352 | MS.gene001093:CDS |
| GAGAAATAACAGACCGTACA+GGG | 0.531821 | 4.1:+65330157 | None:intergenic |
| GCCAGAGGGCATTCATGGTA+TGG | 0.532503 | 4.1:-65330306 | MS.gene001093:CDS |
| TTACAGGAAGGTTACTGTGA+TGG | 0.535841 | 4.1:-65330376 | MS.gene001093:intron |
| TTAACTCAGGCGGTGGTGAT+GGG | 0.538447 | 4.1:+65329382 | None:intergenic |
| GAAATCACTTGCTCTTTGGA+AGG | 0.542791 | 4.1:+65329624 | None:intergenic |
| TGCCTGTAATGAGGCCAAAT+GGG | 0.548171 | 4.1:-65329923 | MS.gene001093:CDS |
| GTTGGAGAGGTTGGTGATGG+AGG | 0.549357 | 4.1:-65331707 | MS.gene001093:CDS |
| CAAAGACCTTGCACTAAATG+TGG | 0.549659 | 4.1:-65330814 | MS.gene001093:CDS |
| TTCCTTCTGGGGTCAACCAA+TGG | 0.553492 | 4.1:-65329213 | MS.gene001093:CDS |
| AATCCGTGTGGGAGATAACC+AGG | 0.554516 | 4.1:-65328959 | MS.gene001093:CDS |
| TGTGCAGCAGGCTTTGATCA+AGG | 0.555297 | 4.1:-65329962 | MS.gene001093:CDS |
| TACCATTGGTTGACCCCAGA+AGG | 0.556401 | 4.1:+65329211 | None:intergenic |
| CACATATTGCAGAGATGAAG+CGG | 0.558172 | 4.1:-65328923 | MS.gene001093:CDS |
| TTCAGTCTTAAGCACTTGCA+AGG | 0.558304 | 4.1:-65329838 | MS.gene001093:CDS |
| TGGAGCGAGGAACAGAAGAA+TGG | 0.559421 | 4.1:-65329134 | MS.gene001093:CDS |
| GAAATCAGTTGCAAATGGAA+TGG | 0.561635 | 4.1:-65329815 | MS.gene001093:CDS |
| TTTCTCTCATTCCCAACCGC+CGG | 0.561689 | 4.1:-65331851 | MS.gene001093:CDS |
| CACCAGATCTTAAGAGCTGA+AGG | 0.563451 | 4.1:+65329441 | None:intergenic |
| TGCGGTACTAAGGATGATGA+TGG | 0.563746 | 4.1:-65329096 | MS.gene001093:CDS |
| CTGGAACGATAATGAGGACA+AGG | 0.564920 | 4.1:+65330197 | None:intergenic |
| TGAGAGAAAATCGTAAAGAT+CGG | 0.568309 | 4.1:+65331865 | None:intergenic |
| TTGATCACAATAAATCGTCC+TGG | 0.568963 | 4.1:+65331628 | None:intergenic |
| TACTCTTGACATTGTTGAAG+AGG | 0.570128 | 4.1:-65331663 | MS.gene001093:CDS |
| ACCATACCATGAATGCCCTC+TGG | 0.571735 | 4.1:+65330305 | None:intergenic |
| CACGGCGGCAGAAACATCTC+CGG | 0.572908 | 4.1:+65331832 | None:intergenic |
| ATCTGCCACGTCATCAGCGA+CGG | 0.573382 | 4.1:+65331740 | None:intergenic |
| GGAGTTCCACATTTAGTGCA+AGG | 0.575869 | 4.1:+65330808 | None:intergenic |
| GATCTTGTTTCGTGTTGGAG+AGG | 0.579130 | 4.1:-65331720 | MS.gene001093:CDS |
| CTCTCCAATTATCTGAAGCA+AGG | 0.580589 | 4.1:-65330786 | MS.gene001093:intron |
| GAATTCAATAGCACTAGATG+TGG | 0.582215 | 4.1:+65329771 | None:intergenic |
| TCGATCCTGGAACGATAATG+AGG | 0.584434 | 4.1:+65330191 | None:intergenic |
| TGCTTCATGCAATTGCCAGA+GGG | 0.584514 | 4.1:-65330320 | MS.gene001093:CDS |
| ACATAATAAACTACAGGGAG+TGG | 0.584555 | 4.1:+65330011 | None:intergenic |
| TAATGAGGACAAGGGCATGT+TGG | 0.585828 | 4.1:+65330206 | None:intergenic |
| AGCACAATTAACTCAGGCGG+TGG | 0.587016 | 4.1:+65329375 | None:intergenic |
| ACAGACCGTACAGGGTTATG+AGG | 0.592256 | 4.1:+65330165 | None:intergenic |
| AGGTCTTTGATATGCTGCAT+TGG | 0.594618 | 4.1:+65330828 | None:intergenic |
| GCGAGGAACAGAAGAATGGA+AGG | 0.594898 | 4.1:-65329130 | MS.gene001093:CDS |
| ACTCAGGCGGTGGTGATGGG+TGG | 0.596918 | 4.1:+65329385 | None:intergenic |
| TTGCTTCATGCAATTGCCAG+AGG | 0.599692 | 4.1:-65330321 | MS.gene001093:CDS |
| TGGCTTAGCACGATTCCGAA+TGG | 0.602115 | 4.1:-65329154 | MS.gene001093:CDS |
| CTGTAAACACCGTTCCGGAA+CGG | 0.603326 | 4.1:+65331809 | None:intergenic |
| CATTCATGGTATGGTAATTG+GGG | 0.608012 | 4.1:-65330297 | MS.gene001093:CDS |
| CTCTTACATACAAACTTGGA+AGG | 0.608157 | 4.1:+65328994 | None:intergenic |
| GGGTCTTTCGTTCATAACCA+TGG | 0.609508 | 4.1:+65331916 | None:intergenic |
| TCAACATTAGTAGCATTCAA+AGG | 0.612275 | 4.1:+65329351 | None:intergenic |
| CTGGAATTGACAGTGCTGAT+GGG | 0.613480 | 4.1:-65329020 | MS.gene001093:CDS |
| ACTCTTAATGGAAAAGAAGG+TGG | 0.616492 | 4.1:-65330550 | MS.gene001093:CDS |
| ATGAGGCCAAATGGGTGACA+AGG | 0.617957 | 4.1:-65329915 | MS.gene001093:CDS |
| AAAGGCAGCACAATTAACTC+AGG | 0.618250 | 4.1:+65329369 | None:intergenic |
| CAAACTCTTAAAGGGGCAGT+GGG | 0.620060 | 4.1:-65329892 | MS.gene001093:CDS |
| GAGGACCTCATAACCCTGTA+CGG | 0.620098 | 4.1:-65330170 | MS.gene001093:CDS |
| GCTGGAATTGACAGTGCTGA+TGG | 0.620926 | 4.1:-65329021 | MS.gene001093:CDS |
| TGCATCAAGTGCCTGTAATG+AGG | 0.624858 | 4.1:-65329932 | MS.gene001093:CDS |
| GGTTTCTGTCTGATCATGCA+AGG | 0.626736 | 4.1:-65331787 | MS.gene001093:CDS |
| TCAGTCTTAAGCACTTGCAA+GGG | 0.628349 | 4.1:-65329837 | MS.gene001093:CDS |
| TCATTATCGTTCCAGGATCG+AGG | 0.631565 | 4.1:-65330189 | MS.gene001093:CDS |
| CTTGCTTCAGATAATTGGAG+AGG | 0.631887 | 4.1:+65330787 | None:intergenic |
| CATGAACATAATAAACTACA+GGG | 0.632491 | 4.1:+65330006 | None:intergenic |
| GCACGATTCCGAATGGAGCG+AGG | 0.632953 | 4.1:-65329147 | MS.gene001093:CDS |
| AACACCGTTCCGGAACGGCA+CGG | 0.638834 | 4.1:+65331814 | None:intergenic |
| AACAACACACATCTTCTGCA+TGG | 0.642554 | 4.1:-65330607 | MS.gene001093:CDS |
| ATACCCTAAAATTCCTTCTG+GGG | 0.646521 | 4.1:-65329224 | MS.gene001093:CDS |
| AATTCAATAGCACTAGATGT+GGG | 0.647489 | 4.1:+65329772 | None:intergenic |
| TGATATCGCTTTCGACACAC+AGG | 0.648182 | 4.1:+65330877 | None:intergenic |
| CAAAATCGAGCAAATGACCT+CGG | 0.649705 | 4.1:-65329469 | MS.gene001093:CDS |
| GACCTATTGAATGAAGTCAC+TGG | 0.652292 | 4.1:-65329330 | MS.gene001093:CDS |
| GGCAGCACAATTAACTCAGG+CGG | 0.652831 | 4.1:+65329372 | None:intergenic |
| GACAAGGCAAACTCTTAAAG+GGG | 0.656461 | 4.1:-65329899 | MS.gene001093:CDS |
| GGTATGCAGCCAGACACCAC+AGG | 0.658046 | 4.1:+65329050 | None:intergenic |
| TGTGTTAACTCAATCCGTGT+GGG | 0.658395 | 4.1:-65328970 | MS.gene001093:CDS |
| ATGTGTTAACTCAATCCGTG+TGG | 0.672293 | 4.1:-65328971 | MS.gene001093:CDS |
| GGCGGCAGAAACATCTCCGG+CGG | 0.672445 | 4.1:+65331835 | None:intergenic |
| TGGAACGATAATGAGGACAA+GGG | 0.680396 | 4.1:+65330198 | None:intergenic |
| AAAGATTAATAGGAAAACAG+TGG | 0.680975 | 4.1:-65329541 | MS.gene001093:CDS |
| AAGCCTGGTTATCTCCCACA+CGG | 0.684838 | 4.1:+65328956 | None:intergenic |
| ATGGTTGTATCATCAACTTG+AGG | 0.693179 | 4.1:-65330632 | MS.gene001093:CDS |
| AAGAGCTGAAGGCAGCTCCG+AGG | 0.699457 | 4.1:+65329452 | None:intergenic |
| ACTGAAGTCAAGAAGCTCTG+GGG | 0.722625 | 4.1:+65329855 | None:intergenic |
| ACCGTTCCGGAACGGCACGG+CGG | 0.727611 | 4.1:+65331817 | None:intergenic |
| ATATTGCAGAGATGAAGCGG+TGG | 0.735388 | 4.1:-65328920 | MS.gene001093:CDS |
| ATGTTAGCATGTGATACCTG+TGG | 0.742288 | 4.1:-65329066 | MS.gene001093:CDS |
| TTGTTGAAGAGGATGTTACG+AGG | 0.760276 | 4.1:-65331652 | MS.gene001093:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAAAAAATGTGAATTT+TGG | - | chr4.1:65331904-65331923 | MS.gene001093:CDS | 10.0% |
| !!! | TAATTTTCTATTTTTTTTTG+GGG | - | chr4.1:65329225-65329244 | MS.gene001093:CDS | 10.0% |
| !! | AAAAAAAAAAACTGTGATAT+AGG | + | chr4.1:65329324-65329343 | None:intergenic | 15.0% |
| !! | TAAATTTAGATTTAAAAAGC+TGG | - | chr4.1:65329555-65329574 | MS.gene001093:CDS | 15.0% |
| !! | TGTTGTTATAATTATGTTAT+AGG | - | chr4.1:65329375-65329394 | MS.gene001093:CDS | 15.0% |
| !!! | TATATTTGATCATTTTTTCA+GGG | + | chr4.1:65331210-65331229 | None:intergenic | 15.0% |
| !!! | TTTTTTATATTACAACTAAC+AGG | + | chr4.1:65331895-65331914 | None:intergenic | 15.0% |
| !! | AATATAGACCAAAGATTAAT+AGG | - | chr4.1:65331224-65331243 | MS.gene001093:intron | 20.0% |
| !!! | ATTGTGCTATAAATTTTTAC+AGG | - | chr4.1:65330383-65330402 | MS.gene001093:intron | 20.0% |
| !!! | CTATATTTGATCATTTTTTC+AGG | + | chr4.1:65331211-65331230 | None:intergenic | 20.0% |
| !!! | CTGTTTTTTATTGATATTGT+AGG | - | chr4.1:65330046-65330065 | MS.gene001093:CDS | 20.0% |
| !!! | TTTCAAATTTGCTGTAATTT+AGG | - | chr4.1:65329530-65329549 | MS.gene001093:CDS | 20.0% |
| ! | AAAGATTAATAGGAAAACAG+TGG | - | chr4.1:65331234-65331253 | MS.gene001093:intron | 25.0% |
| ! | ATAGATTACACAAAAGCTAA+AGG | - | chr4.1:65329662-65329681 | MS.gene001093:CDS | 25.0% |
| ! | ATCAATAAAAAACAGTGTCA+AGG | + | chr4.1:65330041-65330060 | None:intergenic | 25.0% |
| ! | CATGAACATAATAAACTACA+GGG | + | chr4.1:65330772-65330791 | None:intergenic | 25.0% |
| ! | GATTATATAAAACATCAGCT+GGG | + | chr4.1:65331080-65331099 | None:intergenic | 25.0% |
| ! | TTATATAATCCTTGACAGAT+TGG | - | chr4.1:65331090-65331109 | MS.gene001093:intron | 25.0% |
| !! | ACTGTTTTCCTATTAATCTT+TGG | + | chr4.1:65331235-65331254 | None:intergenic | 25.0% |
| !! | TGCTATAAATTTTTACAGGA+AGG | - | chr4.1:65330387-65330406 | MS.gene001093:intron | 25.0% |
| !! | TTGTTGATGGAAAAAAACAA+AGG | - | chr4.1:65329862-65329881 | MS.gene001093:CDS | 25.0% |
| !!! | AGGTAGCAATTTCATTTTTT+TGG | - | chr4.1:65330009-65330028 | MS.gene001093:CDS | 25.0% |
| !!! | TTTTCTATTTTTTTTTGGGG+AGG | - | chr4.1:65329228-65329247 | MS.gene001093:CDS | 25.0% |
| !!! | TTTTTTTTTTGAAACTGCGT+AGG | - | chr4.1:65329337-65329356 | MS.gene001093:CDS | 25.0% |
| AATTCAATAGCACTAGATGT+GGG | + | chr4.1:65331006-65331025 | None:intergenic | 30.0% | |
| ACATCTCTTACATACAAACT+TGG | + | chr4.1:65331788-65331807 | None:intergenic | 30.0% | |
| AGCGATATCACTTCATAATA+AGG | - | chr4.1:65329911-65329930 | MS.gene001093:CDS | 30.0% | |
| ATAAAAAACAGTGTCAAGGT+TGG | + | chr4.1:65330037-65330056 | None:intergenic | 30.0% | |
| ATATTGTAGGATTGAAAGTG+TGG | - | chr4.1:65330059-65330078 | MS.gene001093:CDS | 30.0% | |
| ATCTGATATTATGGGTTTCT+GGG | - | chr4.1:65330266-65330285 | MS.gene001093:CDS | 30.0% | |
| ATGGATTTGTCCAAGAAATT+TGG | - | chr4.1:65330418-65330437 | MS.gene001093:intron | 30.0% | |
| CCATGAACATAATAAACTAC+AGG | + | chr4.1:65330773-65330792 | None:intergenic | 30.0% | |
| CCTGTAGTTTATTATGTTCA+TGG | - | chr4.1:65330770-65330789 | MS.gene001093:intron | 30.0% | |
| CTTACTCTTAATGGAAAAGA+AGG | - | chr4.1:65330222-65330241 | MS.gene001093:CDS | 30.0% | |
| GGATTATATAAAACATCAGC+TGG | + | chr4.1:65331081-65331100 | None:intergenic | 30.0% | |
| GTAATTGGGGTTATGAATTT+GGG | - | chr4.1:65330491-65330510 | MS.gene001093:CDS | 30.0% | |
| TAAAAAACAGTGTCAAGGTT+GGG | + | chr4.1:65330036-65330055 | None:intergenic | 30.0% | |
| TAGAACCAATTCCAACAAAA+AGG | + | chr4.1:65330695-65330714 | None:intergenic | 30.0% | |
| TATACCCTAAAATTCCTTCT+GGG | - | chr4.1:65331550-65331569 | MS.gene001093:intron | 30.0% | |
| TATTTCTCTTTACCAGTCTT+TGG | - | chr4.1:65330633-65330652 | MS.gene001093:CDS | 30.0% | |
| TCAACATTAGTAGCATTCAA+AGG | + | chr4.1:65331427-65331446 | None:intergenic | 30.0% | |
| TGACTGTAAGCAATTTATGA+AGG | - | chr4.1:65331279-65331298 | MS.gene001093:intron | 30.0% | |
| TGAGAGAAAATCGTAAAGAT+CGG | + | chr4.1:65328913-65328932 | None:intergenic | 30.0% | |
| TGATGGAAAAAAACAAAGGA+TGG | - | chr4.1:65329866-65329885 | MS.gene001093:CDS | 30.0% | |
| TGGATTTGTCCAAGAAATTT+GGG | - | chr4.1:65330419-65330438 | MS.gene001093:intron | 30.0% | |
| TTGAATTCAGGTAAGAGTAA+TGG | - | chr4.1:65331019-65331038 | MS.gene001093:intron | 30.0% | |
| ! | ATACTTTGACTGTTTGTTGA+TGG | - | chr4.1:65329849-65329868 | MS.gene001093:CDS | 30.0% |
| ! | ATGTGTTTAATTTACAAGCC+TGG | + | chr4.1:65331837-65331856 | None:intergenic | 30.0% |
| ! | TAGTACTATGATAATGACGT+GGG | - | chr4.1:65329771-65329790 | MS.gene001093:CDS | 30.0% |
| ! | TCACATTTTGCTTCAGATTT+TGG | - | chr4.1:65330344-65330363 | MS.gene001093:CDS | 30.0% |
| ! | TTAGTACTATGATAATGACG+TGG | - | chr4.1:65329770-65329789 | MS.gene001093:CDS | 30.0% |
| !!! | ATTATTTTGATGTACACACC+TGG | - | chr4.1:65329275-65329294 | MS.gene001093:CDS | 30.0% |
| AAAATACATACAGTAGAGCC+AGG | + | chr4.1:65329296-65329315 | None:intergenic | 35.0% | |
| AACTCCAAAGTTAACCACTA+TGG | + | chr4.1:65329622-65329641 | None:intergenic | 35.0% | |
| AATGGTACAGTTGAAGTTCA+AGG | - | chr4.1:65331580-65331599 | MS.gene001093:intron | 35.0% | |
| ACATAATAAACTACAGGGAG+TGG | + | chr4.1:65330767-65330786 | None:intergenic | 35.0% | |
| ACCATATCCTAGAAGTTTCA+CGG | + | chr4.1:65331512-65331531 | None:intergenic | 35.0% | |
| ACTCTTAATGGAAAAGAAGG+TGG | - | chr4.1:65330225-65330244 | MS.gene001093:CDS | 35.0% | |
| ATAATCCAGCCCAAATTTCT+TGG | + | chr4.1:65330431-65330450 | None:intergenic | 35.0% | |
| ATACCCTAAAATTCCTTCTG+GGG | - | chr4.1:65331551-65331570 | MS.gene001093:intron | 35.0% | |
| ATCAGAAATCACTTGCTCTT+TGG | + | chr4.1:65331158-65331177 | None:intergenic | 35.0% | |
| ATGGTTGTATCATCAACTTG+AGG | - | chr4.1:65330143-65330162 | MS.gene001093:CDS | 35.0% | |
| CAAACCATAGTGGTTAACTT+TGG | - | chr4.1:65329615-65329634 | MS.gene001093:CDS | 35.0% | |
| CAAAGTTAACCACTATGGTT+TGG | + | chr4.1:65329617-65329636 | None:intergenic | 35.0% | |
| CATTCATGGTATGGTAATTG+GGG | - | chr4.1:65330478-65330497 | MS.gene001093:intron | 35.0% | |
| CTCTCTGGATCTGATATTAT+GGG | - | chr4.1:65330258-65330277 | MS.gene001093:CDS | 35.0% | |
| CTCTTACATACAAACTTGGA+AGG | + | chr4.1:65331784-65331803 | None:intergenic | 35.0% | |
| GAAATCAGTTGCAAATGGAA+TGG | - | chr4.1:65330960-65330979 | MS.gene001093:intron | 35.0% | |
| GAATTCAATAGCACTAGATG+TGG | + | chr4.1:65331007-65331026 | None:intergenic | 35.0% | |
| GATCTGATATTATGGGTTTC+TGG | - | chr4.1:65330265-65330284 | MS.gene001093:CDS | 35.0% | |
| GCAATAGAGCTTAATCCATT+AGG | + | chr4.1:65331124-65331143 | None:intergenic | 35.0% | |
| GCATTCATGGTATGGTAATT+GGG | - | chr4.1:65330477-65330496 | MS.gene001093:intron | 35.0% | |
| GGTAATTGGGGTTATGAATT+TGG | - | chr4.1:65330490-65330509 | MS.gene001093:CDS | 35.0% | |
| GTATACCCTAAAATTCCTTC+TGG | - | chr4.1:65331549-65331568 | MS.gene001093:intron | 35.0% | |
| GTTGTACATGCTAATGGTTA+TGG | - | chr4.1:65330192-65330211 | MS.gene001093:CDS | 35.0% | |
| TACCGAAGATGCATACAAAA+TGG | - | chr4.1:65330531-65330550 | MS.gene001093:CDS | 35.0% | |
| TACTCTTGACATTGTTGAAG+AGG | - | chr4.1:65329112-65329131 | MS.gene001093:CDS | 35.0% | |
| TCTCTCTGGATCTGATATTA+TGG | - | chr4.1:65330257-65330276 | MS.gene001093:CDS | 35.0% | |
| TGACAAGGCAAACTCTTAAA+GGG | - | chr4.1:65330875-65330894 | MS.gene001093:CDS | 35.0% | |
| TTGAACTTCAACTGTACCAT+TGG | + | chr4.1:65331581-65331600 | None:intergenic | 35.0% | |
| TTGATCACAATAAATCGTCC+TGG | + | chr4.1:65329150-65329169 | None:intergenic | 35.0% | |
| ! | AGATCTCTTCTCCTTTTTGT+TGG | - | chr4.1:65330681-65330700 | MS.gene001093:intron | 35.0% |
| ! | CATCTAGTGCTATTGAATTC+AGG | - | chr4.1:65331007-65331026 | MS.gene001093:intron | 35.0% |
| ! | CTTCTCCTTTTTGTTGGAAT+TGG | - | chr4.1:65330687-65330706 | MS.gene001093:intron | 35.0% |
| ! | TTCTAAATTTTCGTAAGCCC+AGG | - | chr4.1:65330710-65330729 | MS.gene001093:intron | 35.0% |
| !! | ATATTATGGGTTTCTGGGAT+AGG | - | chr4.1:65330271-65330290 | MS.gene001093:CDS | 35.0% |
| !! | GTGTGGTTTGATATTTTTGC+AGG | - | chr4.1:65330076-65330095 | MS.gene001093:CDS | 35.0% |
| !!! | TGCCATTTTGTATGCATCTT+CGG | + | chr4.1:65330536-65330555 | None:intergenic | 35.0% |
| AAAGGCAGCACAATTAACTC+AGG | + | chr4.1:65331409-65331428 | None:intergenic | 40.0% | |
| AAAGTCAGACCAAACCATAG+TGG | - | chr4.1:65329605-65329624 | MS.gene001093:CDS | 40.0% | |
| AACAACACACATCTTCTGCA+TGG | - | chr4.1:65330168-65330187 | MS.gene001093:CDS | 40.0% | |
| AGAGAAATAACAGACCGTAC+AGG | + | chr4.1:65330622-65330641 | None:intergenic | 40.0% | |
| AGGTCTTTGATATGCTGCAT+TGG | + | chr4.1:65329950-65329969 | None:intergenic | 40.0% | |
| ATGTGTTAACTCAATCCGTG+TGG | - | chr4.1:65331804-65331823 | MS.gene001093:CDS | 40.0% | |
| ATGTTAGCATGTGATACCTG+TGG | - | chr4.1:65331709-65331728 | MS.gene001093:CDS | 40.0% | |
| CAAAATCGAGCAAATGACCT+CGG | - | chr4.1:65331306-65331325 | MS.gene001093:intron | 40.0% | |
| CAAAGACCTTGCACTAAATG+TGG | - | chr4.1:65329961-65329980 | MS.gene001093:CDS | 40.0% | |
| CAAGGGAAATCAGTTGCAAA+TGG | - | chr4.1:65330955-65330974 | MS.gene001093:intron | 40.0% | |
| CACATATTGCAGAGATGAAG+CGG | - | chr4.1:65331852-65331871 | MS.gene001093:CDS | 40.0% | |
| CACCAGTGACTTCATTCAAT+AGG | + | chr4.1:65331450-65331469 | None:intergenic | 40.0% | |
| CATTTCTGCTGATGATCTTG+AGG | - | chr4.1:65330119-65330138 | MS.gene001093:CDS | 40.0% | |
| CTTACAGTCAAGAAGCTTTC+TGG | + | chr4.1:65331269-65331288 | None:intergenic | 40.0% | |
| CTTGCTTCAGATAATTGGAG+AGG | + | chr4.1:65329991-65330010 | None:intergenic | 40.0% | |
| GAAATCACTTGCTCTTTGGA+AGG | + | chr4.1:65331154-65331173 | None:intergenic | 40.0% | |
| GAATCGTTGAGTCAGATTCT+CGG | - | chr4.1:65329190-65329209 | MS.gene001093:CDS | 40.0% | |
| GACAAGGCAAACTCTTAAAG+GGG | - | chr4.1:65330876-65330895 | MS.gene001093:CDS | 40.0% | |
| GACCTATTGAATGAAGTCAC+TGG | - | chr4.1:65331445-65331464 | MS.gene001093:intron | 40.0% | |
| GAGAAATAACAGACCGTACA+GGG | + | chr4.1:65330621-65330640 | None:intergenic | 40.0% | |
| GCTACCTTGCTTCAGATAAT+TGG | + | chr4.1:65329996-65330015 | None:intergenic | 40.0% | |
| GGCATTCATGGTATGGTAAT+TGG | - | chr4.1:65330476-65330495 | MS.gene001093:intron | 40.0% | |
| GGTCACTTGCTTACTCTTAA+TGG | - | chr4.1:65330213-65330232 | MS.gene001093:CDS | 40.0% | |
| GTGACAAGGCAAACTCTTAA+AGG | - | chr4.1:65330874-65330893 | MS.gene001093:CDS | 40.0% | |
| TCAGTCTTAAGCACTTGCAA+GGG | - | chr4.1:65330938-65330957 | MS.gene001093:intron | 40.0% | |
| TGGAACGATAATGAGGACAA+GGG | + | chr4.1:65330580-65330599 | None:intergenic | 40.0% | |
| TGTGATCAATGTCGTGTTGT+TGG | - | chr4.1:65329161-65329180 | MS.gene001093:CDS | 40.0% | |
| TGTGTTAACTCAATCCGTGT+GGG | - | chr4.1:65331805-65331824 | MS.gene001093:CDS | 40.0% | |
| TTACAGGAAGGTTACTGTGA+TGG | - | chr4.1:65330399-65330418 | MS.gene001093:intron | 40.0% | |
| TTAGGGTATACACACGATCT+CGG | + | chr4.1:65331540-65331559 | None:intergenic | 40.0% | |
| TTCAGTCTTAAGCACTTGCA+AGG | - | chr4.1:65330937-65330956 | MS.gene001093:intron | 40.0% | |
| TTGTTGAAGAGGATGTTACG+AGG | - | chr4.1:65329123-65329142 | MS.gene001093:CDS | 40.0% | |
| TTTGTAGCCGTGAAACTTCT+AGG | - | chr4.1:65331502-65331521 | MS.gene001093:intron | 40.0% | |
| TTTGTCCAAGAAATTTGGGC+TGG | - | chr4.1:65330423-65330442 | MS.gene001093:intron | 40.0% | |
| ! | CTCTCCAATTATCTGAAGCA+AGG | - | chr4.1:65329989-65330008 | MS.gene001093:CDS | 40.0% |
| ! | TGACCCCAGAAGGAATTTTA+GGG | + | chr4.1:65331557-65331576 | None:intergenic | 40.0% |
| ! | TTGACCCCAGAAGGAATTTT+AGG | + | chr4.1:65331558-65331577 | None:intergenic | 40.0% |
| ! | TTTGTGCAGCTTTGTCTGTT+AGG | - | chr4.1:65330295-65330314 | MS.gene001093:CDS | 40.0% |
| !! | CATGGTGTTGTACATGCTAA+TGG | - | chr4.1:65330186-65330205 | MS.gene001093:CDS | 40.0% |
| !! | CTAAGGATGATGATGGAGAA+AGG | - | chr4.1:65331686-65331705 | MS.gene001093:CDS | 40.0% |
| !! | CTTCTTTTGACTCGCTTAGT+GGG | + | chr4.1:65328882-65328901 | None:intergenic | 40.0% |
| !! | GGTTGGTGGATATGGAATTA+TGG | - | chr4.1:65329810-65329829 | MS.gene001093:CDS | 40.0% |
| !! | TCTTCTTTTGACTCGCTTAG+TGG | + | chr4.1:65328883-65328902 | None:intergenic | 40.0% |
| !!! | AGTCACTGGTGTTTTTCAAG+AGG | - | chr4.1:65331459-65331478 | MS.gene001093:intron | 40.0% |
| !!! | GTGCTAAGCCATTTTTAGCT+GGG | + | chr4.1:65331612-65331631 | None:intergenic | 40.0% |
| ACTGAAGTCAAGAAGCTCTG+GGG | + | chr4.1:65330923-65330942 | None:intergenic | 45.0% | |
| ACTGTCAATTCCAGCACATC+TGG | + | chr4.1:65331749-65331768 | None:intergenic | 45.0% | |
| AGACTGAAGTCAAGAAGCTC+TGG | + | chr4.1:65330925-65330944 | None:intergenic | 45.0% | |
| AGGTGATGTTTCGTCTGGTT+TGG | - | chr4.1:65329088-65329107 | MS.gene001093:CDS | 45.0% | |
| AGTTTGCCTTGTCACCCATT+TGG | + | chr4.1:65330869-65330888 | None:intergenic | 45.0% | |
| ATATTGCAGAGATGAAGCGG+TGG | - | chr4.1:65331855-65331874 | MS.gene001093:CDS | 45.0% | |
| CAAACTCTTAAAGGGGCAGT+GGG | - | chr4.1:65330883-65330902 | MS.gene001093:CDS | 45.0% | |
| CACCAGATCTTAAGAGCTGA+AGG | + | chr4.1:65331337-65331356 | None:intergenic | 45.0% | |
| CTGCTGATGATCTTGAGGAA+TGG | - | chr4.1:65330124-65330143 | MS.gene001093:CDS | 45.0% | |
| CTGGAACGATAATGAGGACA+AGG | + | chr4.1:65330581-65330600 | None:intergenic | 45.0% | |
| CTTGTCCTCATTATCGTTCC+AGG | - | chr4.1:65330579-65330598 | MS.gene001093:CDS | 45.0% | |
| GAAACCTGTAAACACCGTTC+CGG | + | chr4.1:65328974-65328993 | None:intergenic | 45.0% | |
| GACTGAAGTCAAGAAGCTCT+GGG | + | chr4.1:65330924-65330943 | None:intergenic | 45.0% | |
| GAGTCAGATTCTCGGTTCTT+AGG | - | chr4.1:65329198-65329217 | MS.gene001093:CDS | 45.0% | |
| GATCATGTGATGTGGTTGGT+TGG | - | chr4.1:65329793-65329812 | MS.gene001093:CDS | 45.0% | |
| GGAGAATGCCCAGCTAAAAA+TGG | - | chr4.1:65331601-65331620 | MS.gene001093:intron | 45.0% | |
| GGAGTTCCACATTTAGTGCA+AGG | + | chr4.1:65329970-65329989 | None:intergenic | 45.0% | |
| GGTTTCTGTCTGATCATGCA+AGG | - | chr4.1:65328988-65329007 | MS.gene001093:CDS | 45.0% | |
| GTTCAGTTTCAGCCAAAGAC+TGG | + | chr4.1:65330648-65330667 | None:intergenic | 45.0% | |
| TAGGGTATACACACGATCTC+GGG | + | chr4.1:65331539-65331558 | None:intergenic | 45.0% | |
| TCATTATCGTTCCAGGATCG+AGG | - | chr4.1:65330586-65330605 | MS.gene001093:CDS | 45.0% | |
| TCGATCCTGGAACGATAATG+AGG | + | chr4.1:65330587-65330606 | None:intergenic | 45.0% | |
| TGACTGCATTTGCGGTACTA+AGG | - | chr4.1:65331669-65331688 | MS.gene001093:CDS | 45.0% | |
| TGATATCGCTTTCGACACAC+AGG | + | chr4.1:65329901-65329920 | None:intergenic | 45.0% | |
| TGCATCAAGTGCCTGTAATG+AGG | - | chr4.1:65330843-65330862 | MS.gene001093:CDS | 45.0% | |
| TGCCTGTAATGAGGCCAAAT+GGG | - | chr4.1:65330852-65330871 | MS.gene001093:CDS | 45.0% | |
| TGCCTTCAGCTCTTAAGATC+TGG | - | chr4.1:65331332-65331351 | MS.gene001093:intron | 45.0% | |
| TGCGGTACTAAGGATGATGA+TGG | - | chr4.1:65331679-65331698 | MS.gene001093:CDS | 45.0% | |
| TGCTTCATGCAATTGCCAGA+GGG | - | chr4.1:65330455-65330474 | MS.gene001093:intron | 45.0% | |
| TGGAAGGTTGACTGCATTTG+CGG | - | chr4.1:65331661-65331680 | MS.gene001093:CDS | 45.0% | |
| TTGCTTCATGCAATTGCCAG+AGG | - | chr4.1:65330454-65330473 | MS.gene001093:intron | 45.0% | |
| TTGTTTCGTGTTGGAGAGGT+TGG | - | chr4.1:65329059-65329078 | MS.gene001093:CDS | 45.0% | |
| ! | AGATTGGCTCATGTGCCTAA+TGG | - | chr4.1:65331106-65331125 | MS.gene001093:intron | 45.0% |
| ! | ATGGGTGGTCTTCTTTAGGA+TGG | + | chr4.1:65331378-65331397 | None:intergenic | 45.0% |
| ! | GATCTTGTTTCGTGTTGGAG+AGG | - | chr4.1:65329055-65329074 | MS.gene001093:CDS | 45.0% |
| ! | TAATGAGGACAAGGGCATGT+TGG | + | chr4.1:65330572-65330591 | None:intergenic | 45.0% |
| ! | TCACTTGCTCTTTGGAAGGA+TGG | + | chr4.1:65331150-65331169 | None:intergenic | 45.0% |
| ! | TGGCAGATCTTGTTTCGTGT+TGG | - | chr4.1:65329050-65329069 | MS.gene001093:CDS | 45.0% |
| ! | TGGGGTTATGAATTTGGGAC+TGG | - | chr4.1:65330496-65330515 | MS.gene001093:CDS | 45.0% |
| !! | ATGTGGTTGGTTGGTGGATA+TGG | - | chr4.1:65329802-65329821 | MS.gene001093:CDS | 45.0% |
| !! | CTGGAATTGACAGTGCTGAT+GGG | - | chr4.1:65331755-65331774 | MS.gene001093:CDS | 45.0% |
| !! | GCCGTGAAACTTCTAGGATA+TGG | - | chr4.1:65331508-65331527 | MS.gene001093:intron | 45.0% |
| !!! | CGTGCTAAGCCATTTTTAGC+TGG | + | chr4.1:65331613-65331632 | None:intergenic | 45.0% |
| !!! | TTAATTTTCTATTTTTTTTT+GGG | - | chr4.1:65329224-65329243 | MS.gene001093:CDS | 5.0% |
| !!! | TTTAATTTTCTATTTTTTTT+TGG | - | chr4.1:65329223-65329242 | MS.gene001093:CDS | 5.0% |
| AAGAGGATGTTACGAGGTCC+AGG | - | chr4.1:65329129-65329148 | MS.gene001093:CDS | 50.0% | |
| AAGCCTGGTTATCTCCCACA+CGG | + | chr4.1:65331822-65331841 | None:intergenic | 50.0% | |
| AATCCGTGTGGGAGATAACC+AGG | - | chr4.1:65331816-65331835 | MS.gene001093:CDS | 50.0% | |
| ACAGACCGTACAGGGTTATG+AGG | + | chr4.1:65330613-65330632 | None:intergenic | 50.0% | |
| ACCATACCATGAATGCCCTC+TGG | + | chr4.1:65330473-65330492 | None:intergenic | 50.0% | |
| AGCACAATTAACTCAGGCGG+TGG | + | chr4.1:65331403-65331422 | None:intergenic | 50.0% | |
| ATCAGCGACGGAAAAAGCTC+AGG | + | chr4.1:65329026-65329045 | None:intergenic | 50.0% | |
| ATGAGGCCAAATGGGTGACA+AGG | - | chr4.1:65330860-65330879 | MS.gene001093:CDS | 50.0% | |
| ATTAACTCAGGCGGTGGTGA+TGG | + | chr4.1:65331397-65331416 | None:intergenic | 50.0% | |
| CACCCATTTGGCCTCATTAC+AGG | + | chr4.1:65330857-65330876 | None:intergenic | 50.0% | |
| CATGTGATACCTGTGGTGTC+TGG | - | chr4.1:65331716-65331735 | MS.gene001093:CDS | 50.0% | |
| CGATGTTGAAGATGTGCAGC+AGG | - | chr4.1:65330801-65330820 | MS.gene001093:CDS | 50.0% | |
| CTGTAAACACCGTTCCGGAA+CGG | + | chr4.1:65328969-65328988 | None:intergenic | 50.0% | |
| CTTCTGTTCCTCGCTCCATT+CGG | + | chr4.1:65331639-65331658 | None:intergenic | 50.0% | |
| GAGGACCTCATAACCCTGTA+CGG | - | chr4.1:65330605-65330624 | MS.gene001093:CDS | 50.0% | |
| GATGGAGGTGATGTTTCGTC+TGG | - | chr4.1:65329083-65329102 | MS.gene001093:CDS | 50.0% | |
| GCAAACTCTTAAAGGGGCAG+TGG | - | chr4.1:65330882-65330901 | MS.gene001093:CDS | 50.0% | |
| GCACATGAGCCAATCTGTCA+AGG | + | chr4.1:65331102-65331121 | None:intergenic | 50.0% | |
| GCGAGGAACAGAAGAATGGA+AGG | - | chr4.1:65331645-65331664 | MS.gene001093:CDS | 50.0% | |
| GGCAGCACAATTAACTCAGG+CGG | + | chr4.1:65331406-65331425 | None:intergenic | 50.0% | |
| GTGCCTGTAATGAGGCCAAA+TGG | - | chr4.1:65330851-65330870 | MS.gene001093:CDS | 50.0% | |
| GTGGGATCATGTGATGTGGT+TGG | - | chr4.1:65329789-65329808 | MS.gene001093:CDS | 50.0% | |
| TGACGTGGGATCATGTGATG+TGG | - | chr4.1:65329785-65329804 | MS.gene001093:CDS | 50.0% | |
| TGGAGCGAGGAACAGAAGAA+TGG | - | chr4.1:65331641-65331660 | MS.gene001093:CDS | 50.0% | |
| TGGCTTAGCACGATTCCGAA+TGG | - | chr4.1:65331621-65331640 | MS.gene001093:CDS | 50.0% | |
| TTAACTCAGGCGGTGGTGAT+GGG | + | chr4.1:65331396-65331415 | None:intergenic | 50.0% | |
| TTAGCAGTCTCTGCACTCCT+GGG | + | chr4.1:65330730-65330749 | None:intergenic | 50.0% | |
| TTTAGCAGTCTCTGCACTCC+TGG | + | chr4.1:65330731-65330750 | None:intergenic | 50.0% | |
| TTTCTCTCATTCCCAACCGC+CGG | - | chr4.1:65328924-65328943 | MS.gene001093:CDS | 50.0% | |
| ! | CATGTGATGTGGTTGGTTGG+TGG | - | chr4.1:65329796-65329815 | MS.gene001093:CDS | 50.0% |
| ! | GCTGGAATTGACAGTGCTGA+TGG | - | chr4.1:65331754-65331773 | MS.gene001093:CDS | 50.0% |
| ! | TACCATTGGTTGACCCCAGA+AGG | + | chr4.1:65331567-65331586 | None:intergenic | 50.0% |
| ! | TGTGCAGCAGGCTTTGATCA+AGG | - | chr4.1:65330813-65330832 | MS.gene001093:CDS | 50.0% |
| !! | CAATTGCCAGAGGGCATTCA+TGG | - | chr4.1:65330464-65330483 | MS.gene001093:intron | 50.0% |
| !! | GGTGATGGGTGGTCTTCTTT+AGG | + | chr4.1:65331382-65331401 | None:intergenic | 50.0% |
| !! | TTCCTTCTGGGGTCAACCAA+TGG | - | chr4.1:65331562-65331581 | MS.gene001093:intron | 50.0% |
| !! | TTTTTCCGTCGCTGATGACG+TGG | - | chr4.1:65329030-65329049 | MS.gene001093:CDS | 50.0% |
| AGCGACGGAAAAAGCTCAGG+AGG | + | chr4.1:65329023-65329042 | None:intergenic | 55.0% | |
| ATCTGCCACGTCATCAGCGA+CGG | + | chr4.1:65329038-65329057 | None:intergenic | 55.0% | |
| CAGAAACATCTCCGGCGGTT+GGG | + | chr4.1:65328938-65328957 | None:intergenic | 55.0% | |
| CGTTCCGGAACGGTGTTTAC+AGG | - | chr4.1:65328967-65328986 | MS.gene001093:CDS | 55.0% | |
| CTCTTAAAGGGGCAGTGGGT+AGG | - | chr4.1:65330887-65330906 | MS.gene001093:CDS | 55.0% | |
| GGTTATGAGGTCCTCGATCC+TGG | + | chr4.1:65330600-65330619 | None:intergenic | 55.0% | |
| TGGCTGCATACCAGATGTGC+TGG | - | chr4.1:65331736-65331755 | MS.gene001093:CDS | 55.0% | |
| !! | CGTGTTGGAGAGGTTGGTGA+TGG | - | chr4.1:65329065-65329084 | MS.gene001093:CDS | 55.0% |
| !! | GCCAGAGGGCATTCATGGTA+TGG | - | chr4.1:65330469-65330488 | MS.gene001093:intron | 55.0% |
| !! | GTTGGAGAGGTTGGTGATGG+AGG | - | chr4.1:65329068-65329087 | MS.gene001093:CDS | 55.0% |
| AACACCGTTCCGGAACGGCA+CGG | + | chr4.1:65328964-65328983 | None:intergenic | 60.0% | |
| AAGAGCTGAAGGCAGCTCCG+AGG | + | chr4.1:65331326-65331345 | None:intergenic | 60.0% | |
| CACGGCGGCAGAAACATCTC+CGG | + | chr4.1:65328946-65328965 | None:intergenic | 60.0% | |
| GCACGATTCCGAATGGAGCG+AGG | - | chr4.1:65331628-65331647 | MS.gene001093:CDS | 60.0% | |
| GCAGAAACATCTCCGGCGGT+TGG | + | chr4.1:65328939-65328958 | None:intergenic | 60.0% | |
| GGTATGCAGCCAGACACCAC+AGG | + | chr4.1:65331728-65331747 | None:intergenic | 60.0% | |
| GGCGGCAGAAACATCTCCGG+CGG | + | chr4.1:65328943-65328962 | None:intergenic | 65.0% | |
| GGGGCAGTGGGTAGGCGTAT+TGG | - | chr4.1:65330895-65330914 | MS.gene001093:intron | 65.0% | |
| GGTGGCTCGTCGCTTCTCTC+TGG | - | chr4.1:65330243-65330262 | MS.gene001093:CDS | 65.0% | |
| ! | TTTCTGCCGCCGTGCCGTTC+CGG | - | chr4.1:65328952-65328971 | MS.gene001093:CDS | 65.0% |
| !! | ACTCAGGCGGTGGTGATGGG+TGG | + | chr4.1:65331393-65331412 | None:intergenic | 65.0% |
| ACCGTTCCGGAACGGCACGG+CGG | + | chr4.1:65328961-65328980 | None:intergenic | 70.0% | |
| ! | GCCGCCGTGCCGTTCCGGAA+CGG | - | chr4.1:65328957-65328976 | MS.gene001093:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 65328861 | 65331936 | 65328861 | ID=MS.gene001093 |
| chr4.1 | mRNA | 65328861 | 65331936 | 65328861 | ID=MS.gene001093.t1;Parent=MS.gene001093 |
| chr4.1 | exon | 65331615 | 65331936 | 65331615 | ID=MS.gene001093.t1.exon1;Parent=MS.gene001093.t1 |
| chr4.1 | CDS | 65331615 | 65331936 | 65331615 | ID=cds.MS.gene001093.t1;Parent=MS.gene001093.t1 |
| chr4.1 | exon | 65330787 | 65330913 | 65330787 | ID=MS.gene001093.t1.exon2;Parent=MS.gene001093.t1 |
| chr4.1 | CDS | 65330787 | 65330913 | 65330787 | ID=cds.MS.gene001093.t1;Parent=MS.gene001093.t1 |
| chr4.1 | exon | 65330481 | 65330699 | 65330481 | ID=MS.gene001093.t1.exon3;Parent=MS.gene001093.t1 |
| chr4.1 | CDS | 65330481 | 65330699 | 65330481 | ID=cds.MS.gene001093.t1;Parent=MS.gene001093.t1 |
| chr4.1 | exon | 65329769 | 65330392 | 65329769 | ID=MS.gene001093.t1.exon4;Parent=MS.gene001093.t1 |
| chr4.1 | CDS | 65329769 | 65330392 | 65329769 | ID=cds.MS.gene001093.t1;Parent=MS.gene001093.t1 |
| chr4.1 | exon | 65328861 | 65329689 | 65328861 | ID=MS.gene001093.t1.exon5;Parent=MS.gene001093.t1 |
| chr4.1 | CDS | 65328861 | 65329689 | 65328861 | ID=cds.MS.gene001093.t1;Parent=MS.gene001093.t1 |
| Gene Sequence |
| Protein sequence |
