Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001136.t1 | XP_024642265.1 | 65.4 | 685 | 43 | 4 | 1 | 491 | 66 | 750 | 1.80E-232 | 815.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001136.t1 | Q9SZL8 | 24.3 | 276 | 169 | 9 | 6 | 254 | 104 | 366 | 1.8e-15 | 85.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001136.t1 | D3YBB9 | 56.2 | 699 | 88 | 4 | 2 | 482 | 114 | 812 | 3.0e-197 | 697.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene001136.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001136.t1 | MTR_6g090505 | 74.924 | 331 | 33 | 3 | 1 | 306 | 1 | 306 | 3.68e-174 | 494 |
| MS.gene001136.t1 | MTR_0558s0020 | 81.739 | 230 | 19 | 1 | 1 | 207 | 66 | 295 | 4.15e-133 | 387 |
| MS.gene001136.t1 | MTR_1g083640 | 81.068 | 206 | 16 | 1 | 1 | 183 | 81 | 286 | 2.27e-116 | 344 |
| MS.gene001136.t1 | MTR_8g446020 | 73.568 | 227 | 37 | 1 | 4 | 207 | 29 | 255 | 9.00e-113 | 334 |
| MS.gene001136.t1 | MTR_0337s0060 | 62.097 | 248 | 37 | 4 | 258 | 477 | 21 | 239 | 4.09e-89 | 273 |
| MS.gene001136.t1 | MTR_0337s0040 | 67.358 | 193 | 40 | 1 | 4 | 173 | 30 | 222 | 6.12e-85 | 261 |
| MS.gene001136.t1 | MTR_2g014100 | 73.837 | 172 | 22 | 1 | 1 | 149 | 74 | 245 | 7.32e-83 | 257 |
| MS.gene001136.t1 | MTR_3g028680 | 81.169 | 154 | 26 | 1 | 341 | 491 | 6 | 159 | 1.96e-82 | 254 |
| MS.gene001136.t1 | MTR_2g067090 | 82.468 | 154 | 24 | 1 | 341 | 491 | 101 | 254 | 4.68e-82 | 256 |
| MS.gene001136.t1 | MTR_3g008240 | 76.923 | 143 | 25 | 1 | 1 | 143 | 66 | 200 | 8.63e-72 | 227 |
| MS.gene001136.t1 | MTR_4g040430 | 75.352 | 142 | 23 | 2 | 1 | 142 | 65 | 194 | 5.01e-68 | 217 |
| MS.gene001136.t1 | MTR_0019s0290 | 70.588 | 153 | 19 | 2 | 20 | 146 | 8 | 160 | 4.81e-65 | 207 |
| MS.gene001136.t1 | MTR_1g055240 | 71.329 | 143 | 18 | 1 | 26 | 145 | 2 | 144 | 4.38e-64 | 205 |
| MS.gene001136.t1 | MTR_5g071590 | 90.099 | 101 | 10 | 0 | 1 | 101 | 78 | 178 | 7.96e-63 | 203 |
| MS.gene001136.t1 | MTR_4g133495 | 62.585 | 147 | 27 | 3 | 327 | 468 | 122 | 245 | 2.16e-46 | 163 |
| MS.gene001136.t1 | MTR_4g133340 | 62.585 | 147 | 27 | 3 | 327 | 468 | 122 | 245 | 2.16e-46 | 163 |
| MS.gene001136.t1 | MTR_2g067130 | 86.076 | 79 | 11 | 0 | 413 | 491 | 46 | 124 | 1.55e-37 | 135 |
| MS.gene001136.t1 | MTR_1281s0010 | 92.063 | 63 | 5 | 0 | 1 | 63 | 47 | 109 | 6.30e-34 | 124 |
| MS.gene001136.t1 | MTR_6g051425 | 28.922 | 204 | 110 | 6 | 21 | 201 | 64 | 255 | 2.26e-18 | 86.7 |
| MS.gene001136.t1 | MTR_0337s0050 | 63.265 | 49 | 18 | 0 | 172 | 220 | 14 | 62 | 5.11e-16 | 73.2 |
| MS.gene001136.t1 | MTR_1g070355 | 25.854 | 205 | 119 | 4 | 21 | 204 | 119 | 311 | 6.83e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001136.t1 | AT4G38180 | 25.843 | 267 | 148 | 10 | 20 | 254 | 118 | 366 | 6.11e-18 | 87.8 |
| MS.gene001136.t1 | AT4G38170 | 31.068 | 103 | 64 | 3 | 148 | 247 | 24 | 122 | 8.88e-11 | 64.7 |
Find 0 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGATTGTTTTTATAAGTT+TGG | + | 32781:122640-122659 | MS.gene001136:intron | 15.0% |
| !!! | TTTTATAAGTTTGGTTTTTT+AGG | + | 32781:122649-122668 | MS.gene001136:intron | 15.0% |
| !!! | TTTTGTTGAGTTAAATAATT+TGG | + | 32781:121415-121434 | MS.gene001136:intron | 15.0% |
| !! | ACATACTTATTAGAATACTT+AGG | + | 32781:120907-120926 | MS.gene001136:intron | 20.0% |
| !! | ATGTGTATAAGATATATAGA+TGG | + | 32781:120175-120194 | MS.gene001136:CDS | 20.0% |
| !! | TGAATATCATAGTAAAAAGA+TGG | - | 32781:120487-120506 | None:intergenic | 20.0% |
| !! | TGTGTATAAGATATATAGAT+GGG | + | 32781:120176-120195 | MS.gene001136:CDS | 20.0% |
| !!! | AATCAGATTTTGACTATAAT+TGG | + | 32781:121456-121475 | MS.gene001136:CDS | 20.0% |
| !!! | ATCAGATTTTGACTATAATT+GGG | + | 32781:121457-121476 | MS.gene001136:CDS | 20.0% |
| !!! | ATGATGATAAATTGTTTTGA+TGG | + | 32781:121485-121504 | MS.gene001136:CDS | 20.0% |
| !!! | TTCTTATAATTTGTGATTTC+AGG | + | 32781:120970-120989 | MS.gene001136:intron | 20.0% |
| ! | ACAAAACAAGAAATCTGATA+AGG | + | 32781:119972-119991 | MS.gene001136:CDS | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | + | 32781:120608-120627 | MS.gene001136:CDS | 25.0% |
| ! | AGTAAAAAACACTAACCTAA+TGG | - | 32781:120634-120653 | None:intergenic | 25.0% |
| ! | ATGATTGTGAAAACCAATAA+AGG | - | 32781:121150-121169 | None:intergenic | 25.0% |
| ! | ATTATGAAAAAGCTAGAGAA+AGG | + | 32781:122547-122566 | MS.gene001136:intron | 25.0% |
| ! | CAACTAGATTATTCTCTATT+CGG | + | 32781:120559-120578 | MS.gene001136:CDS | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | - | 32781:121856-121875 | None:intergenic | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | + | 32781:121682-121701 | MS.gene001136:CDS | 25.0% |
| ! | TCTTACTTATTTGAACTACA+GGG | + | 32781:120753-120772 | MS.gene001136:intron | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | + | 32781:121856-121875 | MS.gene001136:intron | 25.0% |
| ! | TTCTTACTTATTTGAACTAC+AGG | + | 32781:120752-120771 | MS.gene001136:intron | 25.0% |
| !! | AGAAAAATTTTAGATGACTC+CGG | - | 32781:122336-122355 | None:intergenic | 25.0% |
| !! | CAAAGTTTTCACAATTGATA+AGG | + | 32781:121888-121907 | MS.gene001136:intron | 25.0% |
| !! | TGTTGTATTTTGTTCTGATA+TGG | + | 32781:121105-121124 | MS.gene001136:intron | 25.0% |
| !! | TTCTTTGACTTAATTGGATT+TGG | - | 32781:122513-122532 | None:intergenic | 25.0% |
| !!! | AAGACATAGCTAGTATTTTT+TGG | + | 32781:120521-120540 | MS.gene001136:CDS | 25.0% |
| !!! | ATTTATATTTTGAACTGCCT+AGG | + | 32781:120855-120874 | MS.gene001136:intron | 25.0% |
| !!! | GCTCTTATAAATTCTAAAGT+TGG | + | 32781:120288-120307 | MS.gene001136:CDS | 25.0% |
| !!! | TAGTGTTTTTTACTTCTCTT+AGG | + | 32781:120640-120659 | MS.gene001136:intron | 25.0% |
| !!! | TCATCTAAAATTTTTCTCGA+CGG | + | 32781:122339-122358 | MS.gene001136:CDS | 25.0% |
| !!! | TGATAAATTGTTTTGATGGA+AGG | + | 32781:121489-121508 | MS.gene001136:CDS | 25.0% |
| AAAACACCTGGAAAACTATT+CGG | - | 32781:121323-121342 | None:intergenic | 30.0% | |
| AACAAACAAGGTTTCAAGAA+GGG | + | 32781:120018-120037 | MS.gene001136:CDS | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | + | 32781:120616-120635 | MS.gene001136:CDS | 30.0% | |
| AGAACGTCTTATGAAGTTAT+GGG | + | 32781:120321-120340 | MS.gene001136:intron | 30.0% | |
| AGCAATGACTAATTAATGGT+TGG | + | 32781:120995-121014 | MS.gene001136:intron | 30.0% | |
| AGCTGGAATATATTTGAAGA+TGG | + | 32781:120140-120159 | MS.gene001136:CDS | 30.0% | |
| ATCATGATCTTCAAAACTTG+GGG | - | 32781:121995-122014 | None:intergenic | 30.0% | |
| CAAACTTAAATGATGTTGAC+TGG | + | 32781:120831-120850 | MS.gene001136:intron | 30.0% | |
| CGTTATGTTTGTAACAAACA+AGG | + | 32781:120006-120025 | MS.gene001136:CDS | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | - | 32781:121861-121880 | None:intergenic | 30.0% | |
| CTTACTTATTTGAACTACAG+GGG | + | 32781:120754-120773 | MS.gene001136:intron | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | + | 32781:121859-121878 | MS.gene001136:intron | 30.0% | |
| GAGAATGCAAAGAAAAATCT+TGG | + | 32781:121371-121390 | MS.gene001136:intron | 30.0% | |
| GATCATGATCTTCAAAACTT+GGG | - | 32781:121996-122015 | None:intergenic | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | - | 32781:120612-120631 | None:intergenic | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | - | 32781:121667-121686 | None:intergenic | 30.0% | |
| TAAAGTTCAACTGCCTTTAT+TGG | + | 32781:121134-121153 | MS.gene001136:intron | 30.0% | |
| TAACAAACAAGGTTTCAAGA+AGG | + | 32781:120017-120036 | MS.gene001136:CDS | 30.0% | |
| TAAGAACTATAGTCAATCCT+AGG | - | 32781:120738-120757 | None:intergenic | 30.0% | |
| TAAGATATATAGATGGGATG+TGG | + | 32781:120182-120201 | MS.gene001136:CDS | 30.0% | |
| TAAGTTTGTCTCAAACCAAA+TGG | - | 32781:120819-120838 | None:intergenic | 30.0% | |
| TCTTTGTCTGAAAACTGAAA+AGG | - | 32781:120375-120394 | None:intergenic | 30.0% | |
| TGAATAAATGCAAAGCAAGA+AGG | - | 32781:121821-121840 | None:intergenic | 30.0% | |
| TGACTAATTAATGGTTGGAT+TGG | + | 32781:121000-121019 | MS.gene001136:intron | 30.0% | |
| TTACTTCTCGAAATGATCTA+AGG | - | 32781:120248-120267 | None:intergenic | 30.0% | |
| ! | CATTCTTTGAAGACAATAAC+TGG | + | 32781:122153-122172 | MS.gene001136:CDS | 30.0% |
| ! | GTACTTTCATTAAGTTGTTC+TGG | + | 32781:120677-120696 | MS.gene001136:intron | 30.0% |
| ! | TATGATGATGCTGATAATGA+CGG | + | 32781:121922-121941 | MS.gene001136:intron | 30.0% |
| ! | TTAACCATGCTGTTTGTTTA+GGG | + | 32781:120778-120797 | MS.gene001136:intron | 30.0% |
| ! | TTTAACCATGCTGTTTGTTT+AGG | + | 32781:120777-120796 | MS.gene001136:intron | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | - | 32781:122495-122514 | None:intergenic | 30.0% |
| ! | TTTGTTTCTTCCGATTGATA+AGG | - | 32781:122581-122600 | None:intergenic | 30.0% |
| ! | TTTTCTTGAAGCTGGAAAAA+AGG | + | 32781:122362-122381 | MS.gene001136:CDS | 30.0% |
| !! | ATCATGATCGATTTGATGAA+AGG | + | 32781:122007-122026 | MS.gene001136:intron | 30.0% |
| !!! | GACAATATGTTTTAAAGCGT+TGG | + | 32781:122175-122194 | MS.gene001136:CDS | 30.0% |
| AAATCCCTAAACAAACAGCA+TGG | - | 32781:120785-120804 | None:intergenic | 35.0% | |
| AATCGTCTGTGGTTTCTTAT+TGG | - | 32781:121264-121283 | None:intergenic | 35.0% | |
| AATTCGTCAAAAAGAGATGG+TGG | + | 32781:120408-120427 | MS.gene001136:CDS | 35.0% | |
| ACATTATGGTTCAGAGAATG+AGG | + | 32781:121696-121715 | MS.gene001136:CDS | 35.0% | |
| AGTAAAAAGATGGTTTCGAG+AGG | - | 32781:120477-120496 | None:intergenic | 35.0% | |
| ATGTCGTATGTTTGAGAACA+GGG | + | 32781:122071-122090 | MS.gene001136:intron | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | + | 32781:121697-121716 | MS.gene001136:CDS | 35.0% | |
| CGATCATGATCTTCAAAACT+TGG | - | 32781:121997-122016 | None:intergenic | 35.0% | |
| CTTGCTTTGCATTTATTCAC+AGG | + | 32781:121822-121841 | MS.gene001136:CDS | 35.0% | |
| GAAACCACAGACGATTTATA+CGG | + | 32781:121268-121287 | MS.gene001136:intron | 35.0% | |
| GAAAGGATTGATTGTAAAGC+TGG | + | 32781:120123-120142 | MS.gene001136:CDS | 35.0% | |
| GAAAGTGAAAGAAAAACCTG+AGG | + | 32781:120101-120120 | MS.gene001136:CDS | 35.0% | |
| GACAATTCGTCAAAAAGAGA+TGG | + | 32781:120405-120424 | MS.gene001136:CDS | 35.0% | |
| GAGAACGTCTTATGAAGTTA+TGG | + | 32781:120320-120339 | MS.gene001136:intron | 35.0% | |
| GGCAGAAATTCCTTATCAAT+CGG | + | 32781:122568-122587 | MS.gene001136:intron | 35.0% | |
| GGCTAGCAATGACTAATTAA+TGG | + | 32781:120991-121010 | MS.gene001136:intron | 35.0% | |
| GTAAAAAGATGGTTTCGAGA+GGG | - | 32781:120476-120495 | None:intergenic | 35.0% | |
| GTTTGCTTAATCCTAACAAC+AGG | + | 32781:120043-120062 | MS.gene001136:CDS | 35.0% | |
| TCCAAAACATCAACATTGGA+AGG | - | 32781:121949-121968 | None:intergenic | 35.0% | |
| TCTTATGAAGTTATGGGTCA+AGG | + | 32781:120327-120346 | MS.gene001136:intron | 35.0% | |
| TCTTCAAAACATGTCGACAT+AGG | - | 32781:122101-122120 | None:intergenic | 35.0% | |
| TCTTTCTTTGAACTTTGGTG+CGG | - | 32781:122490-122509 | None:intergenic | 35.0% | |
| TGAAAGAAAAACCTGAGGAA+AGG | + | 32781:120106-120125 | MS.gene001136:CDS | 35.0% | |
| TGCATCCAAAACATCAACAT+TGG | - | 32781:121953-121972 | None:intergenic | 35.0% | |
| TTACAATCAATCCTTTCCTC+AGG | - | 32781:120120-120139 | None:intergenic | 35.0% | |
| TTCACAAACTCAATAACCAG+TGG | - | 32781:120084-120103 | None:intergenic | 35.0% | |
| TTGAAGATCTTGGAGTTCTT+AGG | + | 32781:122114-122133 | MS.gene001136:CDS | 35.0% | |
| TTTGAAGACTTAGATGGTGT+CGG | - | 32781:122426-122445 | None:intergenic | 35.0% | |
| ! | AGAGATGATGAAGCTTTATC+GGG | + | 32781:122603-122622 | MS.gene001136:intron | 35.0% |
| ! | AGTCGCTTCTTTGACTTAAT+TGG | - | 32781:122519-122538 | None:intergenic | 35.0% |
| ! | AGTTTTCCAGGTGTTTTTCA+TGG | + | 32781:121326-121345 | MS.gene001136:intron | 35.0% |
| ! | ATGATGATGCTGATAATGAC+GGG | + | 32781:121923-121942 | MS.gene001136:intron | 35.0% |
| ! | ATTTAGTTTACGCATTGCTG+AGG | + | 32781:120941-120960 | MS.gene001136:intron | 35.0% |
| ! | GAATGCTCTGGTTTATGTAA+TGG | - | 32781:120219-120238 | None:intergenic | 35.0% |
| ! | GAGAGATGATGAAGCTTTAT+CGG | + | 32781:122602-122621 | MS.gene001136:intron | 35.0% |
| ! | GTCAAGTCACATTTTACAAC+TGG | + | 32781:121578-121597 | MS.gene001136:CDS | 35.0% |
| ! | GTTTTCCAGGTGTTTTTCAT+GGG | + | 32781:121327-121346 | MS.gene001136:intron | 35.0% |
| ! | TCAATTCCGAATAGTTTTCC+AGG | + | 32781:121314-121333 | MS.gene001136:intron | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | + | 32781:121626-121645 | MS.gene001136:CDS | 35.0% |
| !! | CTTTCTAAAGGTATTCGTAC+AGG | + | 32781:122399-122418 | MS.gene001136:CDS | 35.0% |
| !!! | CATCGTAAGAGTGTTTTGTT+TGG | + | 32781:121167-121186 | MS.gene001136:intron | 35.0% |
| !!! | GCTACTTTTGAAGACTTAGA+TGG | - | 32781:122432-122451 | None:intergenic | 35.0% |
| !!! | GCTAGTATTTTTTGGTCAGA+TGG | + | 32781:120529-120548 | MS.gene001136:CDS | 35.0% |
| !!! | TCGACATGTTTTGAAGATCT+TGG | + | 32781:122104-122123 | MS.gene001136:CDS | 35.0% |
| !!! | TTTTTCATGGGCTTTGTTCA+TGG | + | 32781:121339-121358 | MS.gene001136:intron | 35.0% |
| AACACAATAATGCACTAGCC+TGG | - | 32781:121295-121314 | None:intergenic | 40.0% | |
| AAGATCTTGGAGTTCTTAGG+TGG | + | 32781:122117-122136 | MS.gene001136:CDS | 40.0% | |
| AATCGAACAAGTGAATGGTC+TGG | - | 32781:121662-121681 | None:intergenic | 40.0% | |
| CATGTCGTATGTTTGAGAAC+AGG | + | 32781:122070-122089 | MS.gene001136:intron | 40.0% | |
| CTTACGCAAATCGTATGCAT+TGG | + | 32781:121543-121562 | MS.gene001136:CDS | 40.0% | |
| GAGGAGTTGCTTCTTTCTAA+AGG | + | 32781:122387-122406 | MS.gene001136:CDS | 40.0% | |
| GATCTTCAAAACTTGGGGAA+AGG | - | 32781:121990-122009 | None:intergenic | 40.0% | |
| GATTTCAGCTTATCGACAGA+CGG | - | 32781:122216-122235 | None:intergenic | 40.0% | |
| GCATACGATTTGCGTAAGTT+TGG | - | 32781:121541-121560 | None:intergenic | 40.0% | |
| TCACACAAGACAAAATGCCT+AGG | - | 32781:120875-120894 | None:intergenic | 40.0% | |
| TGTCGTATGTTTGAGAACAG+GGG | + | 32781:122072-122091 | MS.gene001136:intron | 40.0% | |
| TTGATATCGTTGTGCTTGAG+TGG | - | 32781:122265-122284 | None:intergenic | 40.0% | |
| ! | ATTTTCTCGCTTCTGCCATT+TGG | + | 32781:120801-120820 | MS.gene001136:intron | 40.0% |
| ! | CAGTACATTTTGAACTGCCT+AGG | + | 32781:120718-120737 | MS.gene001136:intron | 40.0% |
| ! | GAGATGATGAAGCTTTATCG+GGG | + | 32781:122604-122623 | MS.gene001136:intron | 40.0% |
| ! | GCCTTCCAATGTTGATGTTT+TGG | + | 32781:121945-121964 | MS.gene001136:intron | 40.0% |
| ! | TACACGTTTTTGTGCAGATC+CGG | + | 32781:122314-122333 | MS.gene001136:CDS | 40.0% |
| !!! | AGACAGCAGCTACTTTTGAT+TGG | + | 32781:121210-121229 | MS.gene001136:intron | 40.0% |
| ACAGACGATTTATACGGACC+AGG | + | 32781:121274-121293 | MS.gene001136:intron | 45.0% | |
| CAAAGCCCATGAAAAACACC+TGG | - | 32781:121335-121354 | None:intergenic | 45.0% | |
| CTGAAATCGACCGTCAATGT+TGG | + | 32781:122228-122247 | MS.gene001136:CDS | 45.0% | |
| CTGTTGCTGAAACATCTGCT+GGG | + | 32781:122454-122473 | MS.gene001136:CDS | 45.0% | |
| GAAGTTATGGGTCAAGGAGT+TGG | + | 32781:120333-120352 | MS.gene001136:intron | 45.0% | |
| GAGGGATAATCATGCTGAGT+TGG | + | 32781:121715-121734 | MS.gene001136:CDS | 45.0% | |
| GTCTTCAGTGCCAACATTGA+CGG | - | 32781:122241-122260 | None:intergenic | 45.0% | |
| TGAAGCTGGAAAAAAGGCAG+AGG | + | 32781:122368-122387 | MS.gene001136:CDS | 45.0% | |
| TGGTCCGTATAAATCGTCTG+TGG | - | 32781:121275-121294 | None:intergenic | 45.0% | |
| TGTTGCTGAAACATCTGCTG+GGG | + | 32781:122455-122474 | MS.gene001136:CDS | 45.0% | |
| ! | CGTCAAAAAGAGATGGTGGT+TGG | + | 32781:120412-120431 | MS.gene001136:CDS | 45.0% |
| ! | TCATGCTGAGTTGGACTTCA+AGG | + | 32781:121724-121743 | MS.gene001136:CDS | 45.0% |
| ! | TCTTTGAACTTTGGTGCGGT+GGG | - | 32781:122486-122505 | None:intergenic | 45.0% |
| ! | TGAAGCTTTATCGGGGATTG+TGG | + | 32781:122611-122630 | MS.gene001136:intron | 45.0% |
| ! | TTCTTTGAACTTTGGTGCGG+TGG | - | 32781:122487-122506 | None:intergenic | 45.0% |
| !! | TATGCATTGGCCTTCAGCTT+GGG | + | 32781:121556-121575 | MS.gene001136:CDS | 45.0% |
| ATCCCAACAGTCAGCTGATG+CGG | + | 32781:121774-121793 | MS.gene001136:CDS | 50.0% | |
| CTAAGGTAACGCGAATGCTC+TGG | - | 32781:120231-120250 | None:intergenic | 50.0% | |
| GAAGGCCTACCTCAGACTTT+AGG | + | 32781:121507-121526 | MS.gene001136:CDS | 50.0% | |
| GACAAGCCACCTAAAGTCTG+AGG | - | 32781:121519-121538 | None:intergenic | 50.0% | |
| GCTGTTGCTGAAACATCTGC+TGG | + | 32781:122453-122472 | MS.gene001136:CDS | 50.0% | |
| GTTATGGGTCAAGGAGTTGG+AGG | + | 32781:120336-120355 | MS.gene001136:intron | 50.0% | |
| TGTGACTTGACCCAAGCTGA+AGG | - | 32781:121569-121588 | None:intergenic | 50.0% | |
| ! | AGCCACCTAAAGTCTGAGGT+AGG | - | 32781:121515-121534 | None:intergenic | 50.0% |
| ! | CTCGACGGTTTTCTTGAAGC+TGG | + | 32781:122354-122373 | MS.gene001136:CDS | 50.0% |
| ! | TCTGCTGTTGGCCTGTTGTT+AGG | - | 32781:120057-120076 | None:intergenic | 50.0% |
| !! | GTATGCATTGGCCTTCAGCT+TGG | + | 32781:121555-121574 | MS.gene001136:CDS | 50.0% |
| !! | TGGGCTTTGTTCATGGCACA+TGG | + | 32781:121346-121365 | MS.gene001136:intron | 50.0% |
| AGACCGCATCAGCTGACTGT+TGG | - | 32781:121780-121799 | None:intergenic | 55.0% | |
| GACCGCATCAGCTGACTGTT+GGG | - | 32781:121779-121798 | None:intergenic | 55.0% | |
| GGCCTACCTCAGACTTTAGG+TGG | + | 32781:121510-121529 | MS.gene001136:CDS | 55.0% | |
| !! | ACCAGTGGACTGTCTGCTGT+TGG | - | 32781:120069-120088 | None:intergenic | 55.0% |
| GCCAACAGCAGACAGTCCAC+TGG | + | 32781:120065-120084 | MS.gene001136:CDS | 60.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | + | 32781:120341-120360 | MS.gene001136:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32781 | gene | 119949 | 122687 | 119949 | ID=MS.gene001136 |
| 32781 | mRNA | 119949 | 122687 | 119949 | ID=MS.gene001136.t1;Parent=MS.gene001136 |
| 32781 | exon | 119949 | 120313 | 119949 | ID=MS.gene001136.t1.exon1;Parent=MS.gene001136.t1 |
| 32781 | CDS | 119949 | 120313 | 119949 | ID=cds.MS.gene001136.t1;Parent=MS.gene001136.t1 |
| 32781 | exon | 120381 | 120637 | 120381 | ID=MS.gene001136.t1.exon2;Parent=MS.gene001136.t1 |
| 32781 | CDS | 120381 | 120637 | 120381 | ID=cds.MS.gene001136.t1;Parent=MS.gene001136.t1 |
| 32781 | exon | 121450 | 121846 | 121450 | ID=MS.gene001136.t1.exon3;Parent=MS.gene001136.t1 |
| 32781 | CDS | 121450 | 121846 | 121450 | ID=cds.MS.gene001136.t1;Parent=MS.gene001136.t1 |
| 32781 | exon | 122092 | 122543 | 122092 | ID=MS.gene001136.t1.exon4;Parent=MS.gene001136.t1 |
| 32781 | CDS | 122092 | 122543 | 122092 | ID=cds.MS.gene001136.t1;Parent=MS.gene001136.t1 |
| 32781 | exon | 122671 | 122687 | 122671 | ID=MS.gene001136.t1.exon5;Parent=MS.gene001136.t1 |
| 32781 | CDS | 122671 | 122687 | 122671 | ID=cds.MS.gene001136.t1;Parent=MS.gene001136.t1 |
| Gene Sequence |
| Protein sequence |
