Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001226.t1 | XP_003631014.2 | 91.7 | 109 | 9 | 0 | 3 | 111 | 875 | 983 | 6.50E-50 | 207.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001226.t1 | Q9C5U0 | 68.8 | 109 | 27 | 1 | 3 | 111 | 959 | 1060 | 8.7e-35 | 148.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001226.t1 | G7LCC4 | 91.7 | 109 | 9 | 0 | 3 | 111 | 632 | 740 | 4.7e-50 | 207.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene001226.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001226.t1 | MTR_8g106150 | 91.743 | 109 | 9 | 0 | 3 | 111 | 632 | 740 | 7.48e-65 | 215 |
| MS.gene001226.t1 | MTR_8g106150 | 91.743 | 109 | 9 | 0 | 3 | 111 | 875 | 983 | 2.75e-64 | 216 |
| MS.gene001226.t1 | MTR_8g106150 | 70.588 | 136 | 12 | 2 | 130 | 237 | 116 | 251 | 7.72e-51 | 178 |
| MS.gene001226.t1 | MTR_8g080770 | 63.889 | 108 | 32 | 1 | 3 | 110 | 855 | 955 | 1.38e-39 | 145 |
| MS.gene001226.t1 | MTR_8g080770 | 43.421 | 152 | 42 | 3 | 130 | 237 | 111 | 262 | 1.28e-24 | 102 |
| MS.gene001226.t1 | MTR_8g080770 | 63.889 | 108 | 32 | 1 | 3 | 110 | 746 | 846 | 1.38e-39 | 145 |
| MS.gene001226.t1 | MTR_8g080770 | 41.176 | 153 | 46 | 2 | 129 | 237 | 1 | 153 | 9.58e-25 | 102 |
| MS.gene001226.t1 | MTR_3g085130 | 62.037 | 108 | 33 | 1 | 3 | 110 | 710 | 809 | 5.27e-37 | 138 |
| MS.gene001226.t1 | MTR_3g085130 | 49.254 | 67 | 33 | 1 | 172 | 237 | 41 | 107 | 1.10e-11 | 64.7 |
| MS.gene001226.t1 | MTR_3g085130 | 62.037 | 108 | 33 | 1 | 3 | 110 | 920 | 1019 | 7.74e-37 | 137 |
| MS.gene001226.t1 | MTR_3g085130 | 44.079 | 152 | 41 | 3 | 130 | 237 | 166 | 317 | 1.13e-25 | 105 |
| MS.gene001226.t1 | MTR_5g097410 | 56.410 | 117 | 42 | 2 | 2 | 111 | 1087 | 1201 | 1.06e-34 | 131 |
| MS.gene001226.t1 | MTR_5g097410 | 43.949 | 157 | 45 | 3 | 123 | 237 | 332 | 487 | 9.89e-28 | 111 |
| MS.gene001226.t1 | MTR_2g067240 | 80.000 | 60 | 11 | 1 | 179 | 237 | 3 | 62 | 1.05e-24 | 99.0 |
| MS.gene001226.t1 | MTR_5g044100 | 73.333 | 60 | 16 | 0 | 1 | 60 | 164 | 223 | 6.80e-24 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001226.t1 | AT2G01830 | 68.807 | 109 | 27 | 1 | 3 | 111 | 936 | 1037 | 2.86e-43 | 156 |
| MS.gene001226.t1 | AT2G01830 | 61.314 | 137 | 24 | 3 | 130 | 237 | 181 | 317 | 6.20e-40 | 147 |
| MS.gene001226.t1 | AT2G01830 | 68.807 | 109 | 27 | 1 | 3 | 111 | 936 | 1037 | 2.86e-43 | 156 |
| MS.gene001226.t1 | AT2G01830 | 61.314 | 137 | 24 | 3 | 130 | 237 | 181 | 317 | 6.20e-40 | 147 |
| MS.gene001226.t1 | AT2G01830 | 68.807 | 109 | 27 | 1 | 3 | 111 | 936 | 1037 | 2.86e-43 | 156 |
| MS.gene001226.t1 | AT2G01830 | 61.314 | 137 | 24 | 3 | 130 | 237 | 181 | 317 | 6.20e-40 | 147 |
| MS.gene001226.t1 | AT2G01830 | 68.807 | 109 | 27 | 1 | 3 | 111 | 936 | 1037 | 2.86e-43 | 156 |
| MS.gene001226.t1 | AT2G01830 | 61.314 | 137 | 24 | 3 | 130 | 237 | 181 | 317 | 6.20e-40 | 147 |
| MS.gene001226.t1 | AT2G01830 | 68.807 | 109 | 27 | 1 | 3 | 111 | 948 | 1049 | 3.04e-43 | 156 |
| MS.gene001226.t1 | AT2G01830 | 61.314 | 137 | 24 | 3 | 130 | 237 | 193 | 329 | 6.27e-40 | 147 |
| MS.gene001226.t1 | AT2G01830 | 68.807 | 109 | 27 | 1 | 3 | 111 | 959 | 1060 | 3.39e-43 | 156 |
| MS.gene001226.t1 | AT2G01830 | 61.314 | 137 | 24 | 3 | 130 | 237 | 204 | 340 | 7.33e-40 | 146 |
| MS.gene001226.t1 | AT1G27320 | 64.348 | 115 | 36 | 2 | 1 | 110 | 902 | 1016 | 1.67e-42 | 154 |
| MS.gene001226.t1 | AT1G27320 | 39.474 | 152 | 48 | 2 | 130 | 237 | 169 | 320 | 4.97e-23 | 98.2 |
| MS.gene001226.t1 | AT5G35750 | 63.248 | 117 | 38 | 2 | 3 | 114 | 1049 | 1165 | 9.54e-42 | 152 |
| MS.gene001226.t1 | AT5G35750 | 44.667 | 150 | 41 | 2 | 130 | 237 | 308 | 457 | 7.46e-28 | 112 |
Find 0 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTAATTTTTTTTTTTT+TGG | + | 43346:59123-59142 | MS.gene001226:intron | 0.0% |
| !! | ATGATTTATAAAAAACAATA+TGG | - | 43346:59447-59466 | None:intergenic | 10.0% |
| !! | TGATTTATAAAAAACAATAT+GGG | - | 43346:59446-59465 | None:intergenic | 10.0% |
| !! | ATCACTATCATTTATTAAAA+TGG | - | 43346:61028-61047 | None:intergenic | 15.0% |
| !! | GTGTTTAGTATAAAAATCTT+GGG | + | 43346:60770-60789 | MS.gene001226:intron | 20.0% |
| !! | TGTGTTTAGTATAAAAATCT+TGG | + | 43346:60769-60788 | MS.gene001226:intron | 20.0% |
| !!! | ACTGTTAATTGAGTATTTTT+TGG | + | 43346:60033-60052 | MS.gene001226:intron | 20.0% |
| !!! | ATAAAAGTATCTGAGATTTT+AGG | + | 43346:59954-59973 | MS.gene001226:intron | 20.0% |
| !!! | CTGTTAATTGAGTATTTTTT+GGG | + | 43346:60034-60053 | MS.gene001226:intron | 20.0% |
| !!! | TTTCTGTGTAATTTTTGAAA+TGG | + | 43346:59827-59846 | MS.gene001226:intron | 20.0% |
| ! | AACAAACATAACATGTATAG+AGG | - | 43346:59398-59417 | None:intergenic | 25.0% |
| ! | AATAAAGAGAAAAGTGACAA+AGG | - | 43346:59792-59811 | None:intergenic | 25.0% |
| ! | ACAAACATAACATGTATAGA+GGG | - | 43346:59397-59416 | None:intergenic | 25.0% |
| ! | TATCATTGAATTTATCAGCA+AGG | - | 43346:59231-59250 | None:intergenic | 25.0% |
| ! | TGTTTCATATGAGTAATTAG+AGG | + | 43346:60738-60757 | MS.gene001226:intron | 25.0% |
| !! | CATGTACTTACATTATTTTC+AGG | + | 43346:59464-59483 | MS.gene001226:intron | 25.0% |
| !! | CTGAATGTTGACATTTTTAT+TGG | + | 43346:61078-61097 | MS.gene001226:intron | 25.0% |
| !! | TGTATTAGTTAGTATTGAAC+TGG | + | 43346:59739-59758 | MS.gene001226:intron | 25.0% |
| !!! | AGTTTTTTCTAAATCAGCAA+AGG | - | 43346:59175-59194 | None:intergenic | 25.0% |
| !!! | GCACGAACTTTTTTATATAT+AGG | - | 43346:60013-60032 | None:intergenic | 25.0% |
| !!! | TGATGTTTCTTTTTTATGTC+TGG | + | 43346:60922-60941 | MS.gene001226:intron | 25.0% |
| !!! | TTGTTTTGTATGAGCATATA+TGG | + | 43346:59707-59726 | MS.gene001226:intron | 25.0% |
| AATAAAAACAAGCAGAGGAA+TGG | - | 43346:60449-60468 | None:intergenic | 30.0% | |
| AGCTGAAACATAGTGAAATA+AGG | - | 43346:60692-60711 | None:intergenic | 30.0% | |
| ATTCAAATGCAAGAAATGGA+CGG | + | 43346:59082-59101 | MS.gene001226:CDS | 30.0% | |
| GAAAGAGATTTAGTGTTAGT+TGG | + | 43346:60100-60119 | MS.gene001226:intron | 30.0% | |
| GGATATTCAAATGCAAGAAA+TGG | + | 43346:59078-59097 | MS.gene001226:CDS | 30.0% | |
| TAGAGTGGTTATAAAGACAA+TGG | + | 43346:60306-60325 | MS.gene001226:CDS | 30.0% | |
| TATAAAGACAATGGAAAGAG+AGG | + | 43346:60315-60334 | MS.gene001226:CDS | 30.0% | |
| TATGAGTAATTAGAGGATGA+AGG | + | 43346:60745-60764 | MS.gene001226:intron | 30.0% | |
| TCATGGCAAATATAGGTAAA+CGG | - | 43346:59576-59595 | None:intergenic | 30.0% | |
| TGAACTCTTCTTCATATCTA+TGG | - | 43346:60064-60083 | None:intergenic | 30.0% | |
| ! | AGAAGCTTTTGCAGAATATA+CGG | + | 43346:60192-60211 | MS.gene001226:CDS | 30.0% |
| ! | ATTAGTTAGTATTGAACTGG+TGG | + | 43346:59742-59761 | MS.gene001226:intron | 30.0% |
| ! | TTATGTCTCAAAACCTTTTG+AGG | + | 43346:59651-59670 | MS.gene001226:CDS | 30.0% |
| !! | ATGAAGAGTGTTTGAAATGT+GGG | + | 43346:59620-59639 | MS.gene001226:CDS | 30.0% |
| !! | ATTTCTCATTTTTGCAATGC+AGG | + | 43346:60494-60513 | MS.gene001226:intron | 30.0% |
| !! | TATGAAGAGTGTTTGAAATG+TGG | + | 43346:59619-59638 | MS.gene001226:CDS | 30.0% |
| !! | TTGACATTTTTATTGGTGTC+AGG | + | 43346:61085-61104 | MS.gene001226:intron | 30.0% |
| !!! | TGACATTTTTATTGGTGTCA+GGG | + | 43346:61086-61105 | MS.gene001226:intron | 30.0% |
| AACACTCTTCATATGTAGCA+TGG | - | 43346:59612-59631 | None:intergenic | 35.0% | |
| ACAGTCCTTGATTTCTTGAA+GGG | + | 43346:61052-61071 | MS.gene001226:intron | 35.0% | |
| ACATCGTATCAATAGACTCA+AGG | - | 43346:60397-60416 | None:intergenic | 35.0% | |
| AGTTACCCTTCAAGAAATCA+AGG | - | 43346:61060-61079 | None:intergenic | 35.0% | |
| CCACAAATAAAAACAAGCAG+AGG | - | 43346:60454-60473 | None:intergenic | 35.0% | |
| GAAGAAGAGTTCAGAGAAAT+AGG | + | 43346:60071-60090 | MS.gene001226:intron | 35.0% | |
| GGGAGCTTAAATTTGTAAAC+AGG | - | 43346:60621-60640 | None:intergenic | 35.0% | |
| GTTAACAACTCTTTGTGCAT+AGG | - | 43346:60257-60276 | None:intergenic | 35.0% | |
| GTTGAAGAAAACGTTGTACT+TGG | + | 43346:60881-60900 | MS.gene001226:intron | 35.0% | |
| TAATGAGCTCTTCTGTTGTT+GGG | - | 43346:60650-60669 | None:intergenic | 35.0% | |
| TACAGTCCTTGATTTCTTGA+AGG | + | 43346:61051-61070 | MS.gene001226:intron | 35.0% | |
| TGAACAATTCCTTCCTCAAA+AGG | - | 43346:59667-59686 | None:intergenic | 35.0% | |
| TGCACAAAGAGTTGTTAACT+CGG | + | 43346:60258-60277 | MS.gene001226:CDS | 35.0% | |
| TGCTGTAATGTTACTGTACT+TGG | + | 43346:59895-59914 | MS.gene001226:intron | 35.0% | |
| TTAATGAGCTCTTCTGTTGT+TGG | - | 43346:60651-60670 | None:intergenic | 35.0% | |
| TTACGTGGATTCAATTTACG+TGG | - | 43346:59255-59274 | None:intergenic | 35.0% | |
| TTCAAATGCAAGAAATGGAC+GGG | + | 43346:59083-59102 | MS.gene001226:CDS | 35.0% | |
| ! | AACACTAATAGTGGCATTGA+CGG | - | 43346:60838-60857 | None:intergenic | 35.0% |
| ! | TCTCAGATACTTTTATCTGC+TGG | - | 43346:59950-59969 | None:intergenic | 35.0% |
| ! | TGTGTCGATAACACTAATAG+TGG | - | 43346:60847-60866 | None:intergenic | 35.0% |
| !! | AGTGTTAGTTGGTGTTGTAA+TGG | + | 43346:60111-60130 | MS.gene001226:intron | 35.0% |
| !! | CTTGTAACTTTGAAGCCAAA+GGG | - | 43346:60174-60193 | None:intergenic | 35.0% |
| !! | GTGTTAGTTGGTGTTGTAAT+GGG | + | 43346:60112-60131 | MS.gene001226:intron | 35.0% |
| !! | TAGTCTAAGATGTGTTGGTT+TGG | + | 43346:59853-59872 | MS.gene001226:intron | 35.0% |
| !! | TCTTGTAACTTTGAAGCCAA+AGG | - | 43346:60175-60194 | None:intergenic | 35.0% |
| !! | TTTTGAGGAAGGAATTGTTC+AGG | + | 43346:59666-59685 | MS.gene001226:CDS | 35.0% |
| !!! | CCTCTGCTTGTTTTTATTTG+TGG | + | 43346:60451-60470 | MS.gene001226:intron | 35.0% |
| !!! | CTGCTTGTTTTTATTTGTGG+AGG | + | 43346:60454-60473 | MS.gene001226:intron | 35.0% |
| AAGCAAGCATCAAACTTGTG+AGG | - | 43346:59055-59074 | None:intergenic | 40.0% | |
| AGAAGACAATGCAAACTGCA+GGG | - | 43346:60992-61011 | None:intergenic | 40.0% | |
| AGCAAGCATCAAACTTGTGA+GGG | - | 43346:59054-59073 | None:intergenic | 40.0% | |
| AGCTCATTAAAGTGACTGCA+GGG | + | 43346:60661-60680 | MS.gene001226:CDS | 40.0% | |
| CAAGTTTGATGCTTGCTTCA+AGG | + | 43346:59057-59076 | MS.gene001226:CDS | 40.0% | |
| CGAATGGTGAATGTAGTGAA+AGG | + | 43346:59539-59558 | MS.gene001226:CDS | 40.0% | |
| GAGAACCCAACAACCTAAAA+GGG | - | 43346:60572-60591 | None:intergenic | 40.0% | |
| GAGTCTATTGATACGATGTC+TGG | + | 43346:60398-60417 | MS.gene001226:intron | 40.0% | |
| GTTTCCTGAGCAAATATGAC+CGG | - | 43346:60367-60386 | None:intergenic | 40.0% | |
| TATTGATACGATGTCTGGAG+AGG | + | 43346:60403-60422 | MS.gene001226:intron | 40.0% | |
| TCTGCTGTCATGGCAAATAT+AGG | - | 43346:59583-59602 | None:intergenic | 40.0% | |
| TGAGAACCCAACAACCTAAA+AGG | - | 43346:60573-60592 | None:intergenic | 40.0% | |
| TTGAAGCAACTCGTCGAATT+CGG | + | 43346:59488-59507 | MS.gene001226:CDS | 40.0% | |
| TTGTTAACTCGGAAAGAGAG+CGG | + | 43346:60269-60288 | MS.gene001226:CDS | 40.0% | |
| TTGTTGGGTTCTCATCATCT+CGG | + | 43346:60579-60598 | MS.gene001226:CDS | 40.0% | |
| ! | AACAACCTAAAAGGGCTAGT+CGG | - | 43346:60564-60583 | None:intergenic | 40.0% |
| ! | AATCCACGTAACTTGCATGT+TGG | + | 43346:59264-59283 | MS.gene001226:intron | 40.0% |
| ! | AGAGTGTTTGAAATGTGGGA+TGG | + | 43346:59624-59643 | MS.gene001226:CDS | 40.0% |
| ! | ATCCGCTCCAAAGTTTTTCA+AGG | - | 43346:58984-59003 | None:intergenic | 40.0% |
| ! | ATGGATTACATCTGCTGTCA+TGG | - | 43346:59593-59612 | None:intergenic | 40.0% |
| ! | CTTTTGCAGAATATACGGCT+AGG | + | 43346:60197-60216 | MS.gene001226:CDS | 40.0% |
| ! | GAGCTCTCAGTATGTTTTCT+CGG | - | 43346:60524-60543 | None:intergenic | 40.0% |
| ! | GGTCTTAGTCTAAGATGTGT+TGG | + | 43346:59848-59867 | MS.gene001226:intron | 40.0% |
| ! | TGTTTGAAATGTGGGATGGA+TGG | + | 43346:59628-59647 | MS.gene001226:CDS | 40.0% |
| !! | GTCTCAAAACCTTTTGAGGA+AGG | + | 43346:59655-59674 | MS.gene001226:CDS | 40.0% |
| !!! | ACTAGCCCTTTTAGGTTGTT+GGG | + | 43346:60564-60583 | MS.gene001226:CDS | 40.0% |
| AAAGAGAGGCTTCACAGGTT+AGG | + | 43346:60329-60348 | MS.gene001226:intron | 45.0% | |
| AACATACTGAGAGCTCCTAC+TGG | + | 43346:60528-60547 | MS.gene001226:CDS | 45.0% | |
| AAGAGAGGCTTCACAGGTTA+GGG | + | 43346:60330-60349 | MS.gene001226:intron | 45.0% | |
| AATGGAAAGAGAGGCTTCAC+AGG | + | 43346:60324-60343 | MS.gene001226:CDS | 45.0% | |
| ACATACTGAGAGCTCCTACT+GGG | + | 43346:60529-60548 | MS.gene001226:CDS | 45.0% | |
| AGCTCTTCTGTTGTTGGGTT+GGG | - | 43346:60645-60664 | None:intergenic | 45.0% | |
| GAAGACAATGCAAACTGCAG+GGG | - | 43346:60991-61010 | None:intergenic | 45.0% | |
| GAGAAGACAATGCAAACTGC+AGG | - | 43346:60993-61012 | None:intergenic | 45.0% | |
| GAGCTCATTAAAGTGACTGC+AGG | + | 43346:60660-60679 | MS.gene001226:CDS | 45.0% | |
| GTTTGAGAAGCAGCATAGAG+TGG | + | 43346:60291-60310 | MS.gene001226:CDS | 45.0% | |
| TAGCCAACATGCAAGTTACG+TGG | - | 43346:59270-59289 | None:intergenic | 45.0% | |
| TGAAGCAACTCGTCGAATTC+GGG | + | 43346:59489-59508 | MS.gene001226:CDS | 45.0% | |
| TGTCAGGGAAACATTGCTGA+AGG | + | 43346:61101-61120 | MS.gene001226:intron | 45.0% | |
| ! | CGCCTTGAAAAACTTTGGAG+CGG | + | 43346:58979-58998 | MS.gene001226:CDS | 45.0% |
| !! | GTAACTTTGAAGCCAAAGGG+TGG | - | 43346:60171-60190 | None:intergenic | 45.0% |
| !! | TTGTTCCGACTAGCCCTTTT+AGG | + | 43346:60556-60575 | MS.gene001226:CDS | 45.0% |
| !!! | GACTAGCCCTTTTAGGTTGT+TGG | + | 43346:60563-60582 | MS.gene001226:CDS | 45.0% |
| AACTCGTCGAATTCGGGAGA+TGG | + | 43346:59495-59514 | MS.gene001226:CDS | 50.0% | |
| AATTCGGGAGATGGAGAGGA+CGG | + | 43346:59504-59523 | MS.gene001226:CDS | 50.0% | |
| GAGCTCTTCTGTTGTTGGGT+TGG | - | 43346:60646-60665 | None:intergenic | 50.0% | |
| GATGTGAAGTGTGCAGACAG+CGG | + | 43346:59001-59020 | MS.gene001226:CDS | 50.0% | |
| GCAAAATCAGCACCACCCTT+TGG | + | 43346:60156-60175 | MS.gene001226:CDS | 50.0% | |
| GCAGGCGCCTTGAAAAACTT+TGG | + | 43346:58974-58993 | MS.gene001226:CDS | 50.0% | |
| GGTTAGGGATGAGTATGCAC+CGG | + | 43346:60345-60364 | MS.gene001226:intron | 50.0% | |
| GTCGGAACAAACTTCCCAGT+AGG | - | 43346:60546-60565 | None:intergenic | 50.0% | |
| ! | TGCACCGGTCATATTTGCTC+AGG | + | 43346:60360-60379 | MS.gene001226:intron | 50.0% |
| !! | CTTCTGTTGTTGGGTTGGGA+GGG | - | 43346:60641-60660 | None:intergenic | 50.0% |
| !! | TCTTCTGTTGTTGGGTTGGG+AGG | - | 43346:60642-60661 | None:intergenic | 50.0% |
| ACGGCGAATGAGGAGACGAA+TGG | + | 43346:59523-59542 | MS.gene001226:CDS | 55.0% | |
| GGGTTCTCATCATCTCGGTG+TGG | + | 43346:60584-60603 | MS.gene001226:CDS | 55.0% | |
| GTCGAATTCGGGAGATGGAG+AGG | + | 43346:59500-59519 | MS.gene001226:CDS | 55.0% | |
| TGTGCATAGGCCACTCCACT+CGG | - | 43346:60244-60263 | None:intergenic | 55.0% | |
| CGGCTAGGACCGCTTTCGAA+AGG | + | 43346:60212-60231 | MS.gene001226:CDS | 60.0% | |
| GATGGAGAGGACGGCGAATG+AGG | + | 43346:59513-59532 | MS.gene001226:CDS | 60.0% | |
| TAGGCCACTCCACTCGGTAG+CGG | - | 43346:60238-60257 | None:intergenic | 60.0% | |
| TTCGAAAGGCCGCTACCGAG+TGG | + | 43346:60226-60245 | MS.gene001226:CDS | 60.0% | |
| ! | CGGTAGCGGCCTTTCGAAAG+CGG | - | 43346:60224-60243 | None:intergenic | 60.0% |
| AAGGCCGCTACCGAGTGGAG+TGG | + | 43346:60231-60250 | MS.gene001226:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 43346 | gene | 58962 | 61134 | 58962 | ID=MS.gene001226 |
| 43346 | mRNA | 58962 | 61134 | 58962 | ID=MS.gene001226.t1;Parent=MS.gene001226 |
| 43346 | exon | 58962 | 59104 | 58962 | ID=MS.gene001226.t1.exon1;Parent=MS.gene001226.t1 |
| 43346 | CDS | 58962 | 59104 | 58962 | ID=cds.MS.gene001226.t1;Parent=MS.gene001226.t1 |
| 43346 | exon | 59486 | 59687 | 59486 | ID=MS.gene001226.t1.exon2;Parent=MS.gene001226.t1 |
| 43346 | CDS | 59486 | 59687 | 59486 | ID=cds.MS.gene001226.t1;Parent=MS.gene001226.t1 |
| 43346 | exon | 60148 | 60345 | 60148 | ID=MS.gene001226.t1.exon3;Parent=MS.gene001226.t1 |
| 43346 | CDS | 60148 | 60345 | 60148 | ID=cds.MS.gene001226.t1;Parent=MS.gene001226.t1 |
| 43346 | exon | 60516 | 60682 | 60516 | ID=MS.gene001226.t1.exon4;Parent=MS.gene001226.t1 |
| 43346 | CDS | 60516 | 60682 | 60516 | ID=cds.MS.gene001226.t1;Parent=MS.gene001226.t1 |
| 43346 | exon | 61107 | 61134 | 61107 | ID=MS.gene001226.t1.exon5;Parent=MS.gene001226.t1 |
| 43346 | CDS | 61107 | 61134 | 61107 | ID=cds.MS.gene001226.t1;Parent=MS.gene001226.t1 |
| Gene Sequence |
| Protein sequence |
