Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001454.t1 | PNX89523.1 | 40 | 95 | 56 | 1 | 7 | 101 | 2 | 95 | 6.20E-08 | 68.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001454.t1 | A0A2K3MFE8 | 40.0 | 95 | 56 | 1 | 7 | 101 | 2 | 95 | 4.5e-08 | 68.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene001454.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTAAGAAGAAAAAAAAA+CGG | + | 57329:7485-7504 | None:intergenic | 10.0% |
| !! | AAAATTTGCAATACATTTAT+AGG | - | 57329:7801-7820 | MS.gene001454:CDS | 15.0% |
| !! | AAATTTGCAATACATTTATA+GGG | - | 57329:7802-7821 | MS.gene001454:CDS | 15.0% |
| !! | ATAAGAAATTGCAAAAATTT+GGG | - | 57329:7916-7935 | MS.gene001454:CDS | 15.0% |
| !!! | TTATAGATTTTCAATACTTT+TGG | - | 57329:8103-8122 | MS.gene001454:intron | 15.0% |
| !! | AACAAAAAAAACAATCATTC+TGG | + | 57329:7364-7383 | None:intergenic | 20.0% |
| !! | AATTTGCAATACATTTATAG+GGG | - | 57329:7803-7822 | MS.gene001454:CDS | 20.0% |
| !! | CATAAGAAATTGCAAAAATT+TGG | - | 57329:7915-7934 | MS.gene001454:CDS | 20.0% |
| !! | CTTTATACAGTTATTTATTG+TGG | - | 57329:9025-9044 | MS.gene001454:intron | 20.0% |
| !! | GGTTTATATAAGAAATTCAA+GGG | - | 57329:7886-7905 | MS.gene001454:CDS | 20.0% |
| !! | GTTTATATAAGAAATTCAAG+GGG | - | 57329:7887-7906 | MS.gene001454:CDS | 20.0% |
| !! | TAATTATAACCATTGTTCTA+AGG | + | 57329:7975-7994 | None:intergenic | 20.0% |
| !! | TATATAAACCCCTATAAATT+GGG | + | 57329:7876-7895 | None:intergenic | 20.0% |
| !! | TATTGAAAATCTATAAGCAA+AGG | + | 57329:8099-8118 | None:intergenic | 20.0% |
| !! | TTATATAAACCCCTATAAAT+TGG | + | 57329:7877-7896 | None:intergenic | 20.0% |
| ! | AAAGAAATTGCCCAATTTAT+AGG | - | 57329:7863-7882 | MS.gene001454:CDS | 25.0% |
| ! | AAGAAATTGCCCAATTTATA+GGG | - | 57329:7864-7883 | MS.gene001454:CDS | 25.0% |
| ! | ACACAACAAAATACAAAGAA+TGG | + | 57329:7738-7757 | None:intergenic | 25.0% |
| ! | ATAAATAACTGTATAAAGCG+TGG | + | 57329:9023-9042 | None:intergenic | 25.0% |
| ! | GGGTTTATATAAGAAATTCA+AGG | - | 57329:7885-7904 | MS.gene001454:CDS | 25.0% |
| ! | GTGTATGAGAAACAAAATTA+TGG | + | 57329:7713-7732 | None:intergenic | 25.0% |
| ! | TACAGTTATTTATTGTGGTT+TGG | - | 57329:9030-9049 | MS.gene001454:intron | 25.0% |
| ! | TTGTAGATTCCCTTAAAAAA+GGG | - | 57329:7641-7660 | MS.gene001454:CDS | 25.0% |
| !! | TTTCGATATTGATGATAATG+AGG | - | 57329:8846-8865 | MS.gene001454:intron | 25.0% |
| !!! | TATTTTTACGAACGTTTCAA+AGG | - | 57329:8184-8203 | MS.gene001454:CDS | 25.0% |
| AAACGTTCGTAAAAATACCA+TGG | + | 57329:8181-8200 | None:intergenic | 30.0% | |
| AACGTTCGTAAAAATACCAT+GGG | + | 57329:8180-8199 | None:intergenic | 30.0% | |
| AGAAATTGCCCAATTTATAG+GGG | - | 57329:7865-7884 | MS.gene001454:CDS | 30.0% | |
| AGTATCCAATCGATATTAAG+TGG | - | 57329:9186-9205 | MS.gene001454:intron | 30.0% | |
| CATCATTAATTGGATTTGAC+GGG | + | 57329:8675-8694 | None:intergenic | 30.0% | |
| CCTTCAAAAAAGAGAAAAAC+TGG | + | 57329:7998-8017 | None:intergenic | 30.0% | |
| GCATCATTAATTGGATTTGA+CGG | + | 57329:8676-8695 | None:intergenic | 30.0% | |
| GTTGTAGATTCCCTTAAAAA+AGG | - | 57329:7640-7659 | MS.gene001454:CDS | 30.0% | |
| TCATTCCACTTAATATCGAT+TGG | + | 57329:9194-9213 | None:intergenic | 30.0% | |
| TGTTTGTATTCTGTAGCTTA+CGG | - | 57329:8147-8166 | MS.gene001454:CDS | 30.0% | |
| TTATCATCAATATCGAAAGC+AGG | + | 57329:8844-8863 | None:intergenic | 30.0% | |
| ! | CAGCAGCATTAATTTGAAAT+TGG | + | 57329:8555-8574 | None:intergenic | 30.0% |
| ! | TAATATCGATTGGATACTCA+CGG | + | 57329:9184-9203 | None:intergenic | 30.0% |
| !!! | ATTGCAAATTTTTTTTCGCC+CGG | + | 57329:7793-7812 | None:intergenic | 30.0% |
| !!! | CCAGTTTTTCTCTTTTTTGA+AGG | - | 57329:7995-8014 | MS.gene001454:intron | 30.0% |
| !!! | TTTTTTTTACCCTGCATATG+CGG | + | 57329:7688-7707 | None:intergenic | 30.0% |
| AAAATCTATAAGCAAAGGCG+AGG | + | 57329:8094-8113 | None:intergenic | 35.0% | |
| AAATAAATCAGCAGCAGCAA+CGG | + | 57329:8620-8639 | None:intergenic | 35.0% | |
| AAATCTATAAGCAAAGGCGA+GGG | + | 57329:8093-8112 | None:intergenic | 35.0% | |
| AATCGTAGGTTTAGACCTAA+TGG | + | 57329:8337-8356 | None:intergenic | 35.0% | |
| AATTAATGCTGCTGCTATTG+TGG | - | 57329:8561-8580 | MS.gene001454:intron | 35.0% | |
| AGGTAACTAATCGTCAATTG+AGG | - | 57329:8413-8432 | MS.gene001454:CDS | 35.0% | |
| ATATCACCATCATCAGGAAT+GGG | + | 57329:8712-8731 | None:intergenic | 35.0% | |
| ATTAATGCTGCTGCTATTGT+GGG | - | 57329:8562-8581 | MS.gene001454:intron | 35.0% | |
| GAAATTGCAAAAATTTGGGC+CGG | - | 57329:7920-7939 | MS.gene001454:CDS | 35.0% | |
| GAGTTGTGTGCATCATTAAT+TGG | + | 57329:8685-8704 | None:intergenic | 35.0% | |
| GATCATTATGAGCAACCATT+AGG | - | 57329:8319-8338 | MS.gene001454:CDS | 35.0% | |
| GGAATCTACAACTACAACAT+TGG | + | 57329:7632-7651 | None:intergenic | 35.0% | |
| GTCAAATAGAGCATAGAGTT+TGG | - | 57329:8206-8225 | MS.gene001454:CDS | 35.0% | |
| TAAAACATGTGTCTCCAACT+GGG | + | 57329:8929-8948 | None:intergenic | 35.0% | |
| TTAAAACATGTGTCTCCAAC+TGG | + | 57329:8930-8949 | None:intergenic | 35.0% | |
| ! | AGCATCGCATTTTGAATCAT+TGG | + | 57329:7331-7350 | None:intergenic | 35.0% |
| ! | CAAAGTATCTAAATGTACGC+AGG | + | 57329:8477-8496 | None:intergenic | 35.0% |
| ! | CGATATTGATGATAATGAGG+AGG | - | 57329:8849-8868 | MS.gene001454:intron | 35.0% |
| ! | TCTAGGTTTGGAGTATGTTA+CGG | - | 57329:8247-8266 | MS.gene001454:CDS | 35.0% |
| ! | TTGTACCAGCAAAATTTGCT+CGG | - | 57329:9105-9124 | MS.gene001454:intron | 35.0% |
| !! | GTATTTTGTTGTGTTGTGAG+TGG | - | 57329:7744-7763 | MS.gene001454:CDS | 35.0% |
| !! | TAATTTCTGGGATGATGATG+AGG | - | 57329:8816-8835 | MS.gene001454:intron | 35.0% |
| !!! | TTGCAAATTTTTTTTCGCCC+GGG | + | 57329:7792-7811 | None:intergenic | 35.0% |
| !!! | TTTTTTTACCCTGCATATGC+GGG | + | 57329:7687-7706 | None:intergenic | 35.0% |
| AAAACATGTGTCTCCAACTG+GGG | + | 57329:8928-8947 | None:intergenic | 40.0% | |
| AAAACCGCATAAAGCGACAT+CGG | - | 57329:9214-9233 | MS.gene001454:intron | 40.0% | |
| AAACATCCCGTTATCGTCAT+AGG | + | 57329:8362-8381 | None:intergenic | 40.0% | |
| AAATGGATGTGGTAGATGCT+GGG | - | 57329:8887-8906 | MS.gene001454:intron | 40.0% | |
| AATGCAACATCCACCAGATA+TGG | + | 57329:7400-7419 | None:intergenic | 40.0% | |
| ACTACCATATCACCATCATC+AGG | + | 57329:8718-8737 | None:intergenic | 40.0% | |
| AGAGAGAACAGATTTGTGGA+AGG | - | 57329:9269-9288 | MS.gene001454:intron | 40.0% | |
| ATTCACTCTTGACATGGATG+AGG | - | 57329:8393-8412 | MS.gene001454:CDS | 40.0% | |
| CATATCACCATCATCAGGAA+TGG | + | 57329:8713-8732 | None:intergenic | 40.0% | |
| CGATTGACCTATGACGATAA+CGG | - | 57329:8352-8371 | MS.gene001454:CDS | 40.0% | |
| CGTTAGAGAGAACAGATTTG+TGG | - | 57329:9265-9284 | MS.gene001454:intron | 40.0% | |
| GATTGACCTATGACGATAAC+GGG | - | 57329:8353-8372 | MS.gene001454:CDS | 40.0% | |
| GTATGTTACGGAGAGATCAA+TGG | - | 57329:8259-8278 | MS.gene001454:CDS | 40.0% | |
| GTTGCTCATAATGATCAAGC+AGG | + | 57329:8315-8334 | None:intergenic | 40.0% | |
| TATCGTCATAGGTCAATCGT+AGG | + | 57329:8351-8370 | None:intergenic | 40.0% | |
| TATGGATGTCGAAATGGATG+TGG | - | 57329:8876-8895 | MS.gene001454:intron | 40.0% | |
| TCAGAACGTGGCTAATTTCT+GGG | - | 57329:8804-8823 | MS.gene001454:intron | 40.0% | |
| TCATCCATGTCAAGAGTGAA+TGG | + | 57329:8394-8413 | None:intergenic | 40.0% | |
| TTCAGAACGTGGCTAATTTC+TGG | - | 57329:8803-8822 | MS.gene001454:intron | 40.0% | |
| TTTAACGCTTTCTGCGTACA+TGG | - | 57329:8945-8964 | MS.gene001454:intron | 40.0% | |
| TTTATTTCCAGCAGTTCCAC+CGG | - | 57329:8633-8652 | MS.gene001454:intron | 40.0% | |
| ! | AAGCGACATCGGTATTTTTC+AGG | - | 57329:9225-9244 | MS.gene001454:intron | 40.0% |
| ! | AATTAGCCACGTTCTGAATC+TGG | + | 57329:8801-8820 | None:intergenic | 40.0% |
| ! | ACCAGATATGGAAGTGTATC+GGG | + | 57329:7388-7407 | None:intergenic | 40.0% |
| ! | AGAGCATAGAGTTTGGTTTC+AGG | - | 57329:8213-8232 | MS.gene001454:CDS | 40.0% |
| ! | AGCGACATCGGTATTTTTCA+GGG | - | 57329:9226-9245 | MS.gene001454:intron | 40.0% |
| ! | ATTAGCCACGTTCTGAATCT+GGG | + | 57329:8800-8819 | None:intergenic | 40.0% |
| ! | CACCAGATATGGAAGTGTAT+CGG | + | 57329:7389-7408 | None:intergenic | 40.0% |
| ! | TTTGGTTTCAGGATACCAGA+GGG | - | 57329:8224-8243 | MS.gene001454:CDS | 40.0% |
| !! | AATACCGATGTCGCTTTATG+CGG | + | 57329:9221-9240 | None:intergenic | 40.0% |
| !! | ATAACCATTGTTCTAAGGCC+CGG | + | 57329:7970-7989 | None:intergenic | 40.0% |
| !! | CATTCCTGATGATGGTGATA+TGG | - | 57329:8711-8730 | MS.gene001454:intron | 40.0% |
| !! | TGCATGCATTGATTCATCAG+TGG | - | 57329:7419-7438 | MS.gene001454:CDS | 40.0% |
| !! | TTTTGTTGTGTTGTGAGTGG+CGG | - | 57329:7747-7766 | MS.gene001454:CDS | 40.0% |
| !!! | ACCAGGTTGCCCTTTTTTAA+GGG | + | 57329:7653-7672 | None:intergenic | 40.0% |
| AATGGATGTGGTAGATGCTG+GGG | - | 57329:8888-8907 | MS.gene001454:intron | 45.0% | |
| AGACGAAGACGAAGATGAGT+CGG | + | 57329:8503-8522 | None:intergenic | 45.0% | |
| CATGGTGAAATGCAGCAACA+TGG | - | 57329:8963-8982 | MS.gene001454:intron | 45.0% | |
| CGATACACTTCCATATCTGG+TGG | - | 57329:7387-7406 | MS.gene001454:CDS | 45.0% | |
| CGATGTTGAATACCCTCCTT+TGG | + | 57329:7267-7286 | None:intergenic | 45.0% | |
| GAAATGGATGTGGTAGATGC+TGG | - | 57329:8886-8905 | MS.gene001454:intron | 45.0% | |
| GCTTCCATTCACTCTTGACA+TGG | - | 57329:8387-8406 | MS.gene001454:CDS | 45.0% | |
| GGAACTATGACCATAGCTCA+AGG | - | 57329:8434-8453 | MS.gene001454:CDS | 45.0% | |
| TCCCGATACACTTCCATATC+TGG | - | 57329:7384-7403 | MS.gene001454:CDS | 45.0% | |
| TCCCTTAAAAAAGGGCAACC+TGG | - | 57329:7649-7668 | MS.gene001454:CDS | 45.0% | |
| TCGTCTTCGTCATCTGATGA+TGG | - | 57329:8529-8548 | MS.gene001454:intron | 45.0% | |
| TGACATGCAACCTTGAGCTA+TGG | + | 57329:8447-8466 | None:intergenic | 45.0% | |
| TGTTACGGAGAGATCAATGG+CGG | - | 57329:8262-8281 | MS.gene001454:CDS | 45.0% | |
| TTATTTCCAGCAGTTCCACC+GGG | - | 57329:8634-8653 | MS.gene001454:intron | 45.0% | |
| ! | AAATTTGCTCGGCGAGCATT+TGG | - | 57329:9116-9135 | MS.gene001454:intron | 45.0% |
| ! | AATTTGCTCGGCGAGCATTT+GGG | - | 57329:9117-9136 | MS.gene001454:intron | 45.0% |
| ! | ACAGATTTGTGGAAGGCACA+AGG | - | 57329:9276-9295 | MS.gene001454:intron | 45.0% |
| ! | CAGATTTGTGGAAGGCACAA+GGG | - | 57329:9277-9296 | MS.gene001454:intron | 45.0% |
| ! | CCAGGATTTTTATGAAGCCC+GGG | - | 57329:7772-7791 | MS.gene001454:CDS | 45.0% |
| ! | GAAGATTAGAGCACCATACC+TGG | + | 57329:7303-7322 | None:intergenic | 45.0% |
| ! | GCCAGGATTTTTATGAAGCC+CGG | - | 57329:7771-7790 | MS.gene001454:CDS | 45.0% |
| ! | GGATTTTGTTCTTCCACCAC+TGG | + | 57329:8757-8776 | None:intergenic | 45.0% |
| ! | GTTTGGTTTCAGGATACCAG+AGG | - | 57329:8223-8242 | MS.gene001454:CDS | 45.0% |
| ! | TAGAGCACCATACCTGGTTT+GGG | + | 57329:7297-7316 | None:intergenic | 45.0% |
| ! | TATCGATTGGATACTCACGG+TGG | + | 57329:9181-9200 | None:intergenic | 45.0% |
| ! | TGATAATGAGGAGGCTGCTA+TGG | - | 57329:8858-8877 | MS.gene001454:intron | 45.0% |
| ! | TTAGAGCACCATACCTGGTT+TGG | + | 57329:7298-7317 | None:intergenic | 45.0% |
| !! | AAGGAGGGTATTCAACATCG+CGG | - | 57329:7267-7286 | MS.gene001454:CDS | 45.0% |
| !! | GCGACATCGGTATTTTTCAG+GGG | - | 57329:9227-9246 | MS.gene001454:intron | 45.0% |
| !! | GTTGCTGTTGGTGGTGATAA+TGG | - | 57329:8592-8611 | MS.gene001454:intron | 45.0% |
| !!! | ACATCGGTATTTTTCAGGGG+CGG | - | 57329:9230-9249 | MS.gene001454:intron | 45.0% |
| !!! | CACCAGGTTGCCCTTTTTTA+AGG | + | 57329:7654-7673 | None:intergenic | 45.0% |
| ACTCACGGTGGAACTCATCT+CGG | + | 57329:9169-9188 | None:intergenic | 50.0% | |
| AGTAGCCCAGATTCAGAACG+TGG | - | 57329:8792-8811 | MS.gene001454:intron | 50.0% | |
| CCCGGGCTTCATAAAAATCC+TGG | + | 57329:7775-7794 | None:intergenic | 50.0% | |
| CTCATCTCGGATCGTGATGA+AGG | + | 57329:9156-9175 | None:intergenic | 50.0% | |
| GATACCAGAGGGTCTAGGTT+TGG | - | 57329:8235-8254 | MS.gene001454:CDS | 50.0% | |
| GGCTGCTATGGATGTCGAAA+TGG | - | 57329:8870-8889 | MS.gene001454:intron | 50.0% | |
| GTTCTTCCACCACTGGTACT+GGG | + | 57329:8750-8769 | None:intergenic | 50.0% | |
| TACTCCAAACCTAGACCCTC+TGG | + | 57329:8242-8261 | None:intergenic | 50.0% | |
| TCACCATCATCAGGAATGGG+AGG | + | 57329:8709-8728 | None:intergenic | 50.0% | |
| TCTCCTCCCATTCCTGATGA+TGG | - | 57329:8703-8722 | MS.gene001454:intron | 50.0% | |
| TCTCGGATCGTGATGAAGGT+TGG | + | 57329:9152-9171 | None:intergenic | 50.0% | |
| TGTTCTTCCACCACTGGTAC+TGG | + | 57329:8751-8770 | None:intergenic | 50.0% | |
| TTCAGGATACCAGAGGGTCT+AGG | - | 57329:8230-8249 | MS.gene001454:CDS | 50.0% | |
| !!! | GGTATTTTTCAGGGGCGGTT+GGG | - | 57329:9235-9254 | MS.gene001454:intron | 50.0% |
| !!! | GTATTTTTCAGGGGCGGTTG+GGG | - | 57329:9236-9255 | MS.gene001454:intron | 50.0% |
| AAAAATTTGGGCCGGAGCCC+GGG | - | 57329:7928-7947 | MS.gene001454:CDS | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | 57329:7675-7694 | MS.gene001454:CDS | 55.0% | |
| CAAAAATTTGGGCCGGAGCC+CGG | - | 57329:7927-7946 | MS.gene001454:CDS | 55.0% | |
| CGGTCAACCCAAACCAGGTA+TGG | - | 57329:7287-7306 | MS.gene001454:CDS | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | 57329:7676-7695 | MS.gene001454:CDS | 55.0% | |
| CTGAATCTGGGCTACTGCAG+CGG | + | 57329:8788-8807 | None:intergenic | 55.0% | |
| GCTGCTGCTATTGTGGGTTC+TGG | - | 57329:8568-8587 | MS.gene001454:intron | 55.0% | |
| GGCGGTGGTTGCTTCTATTC+AGG | - | 57329:8280-8299 | MS.gene001454:CDS | 55.0% | |
| GTAGATGCTGGGGATGCACA+TGG | - | 57329:8898-8917 | MS.gene001454:intron | 55.0% | |
| GTTCCACCGGGTTTCGAAGT+AGG | - | 57329:8646-8665 | MS.gene001454:intron | 55.0% | |
| TACGGAGAGATCAATGGCGG+TGG | - | 57329:8265-8284 | MS.gene001454:CDS | 55.0% | |
| TGCACATGGCAATCCCCAGT+TGG | - | 57329:8912-8931 | MS.gene001454:intron | 55.0% | |
| TGTTCCTGACCCAGTACCAG+TGG | - | 57329:8738-8757 | MS.gene001454:intron | 55.0% | |
| ! | GCTCGCCGAGCAAATTTTGC+TGG | + | 57329:9113-9132 | None:intergenic | 55.0% |
| !! | GGTTCTGGTGTTGCTGTTGG+TGG | - | 57329:8583-8602 | MS.gene001454:intron | 55.0% |
| !! | GTGGGTTCTGGTGTTGCTGT+TGG | - | 57329:8580-8599 | MS.gene001454:intron | 55.0% |
| !!! | CGGTATTTTTCAGGGGCGGT+TGG | - | 57329:9234-9253 | MS.gene001454:intron | 55.0% |
| AACTGTCCTGCACGTGAGGC+AGG | - | 57329:9328-9347 | MS.gene001454:CDS | 60.0% | |
| ACCCAACTGTCCTGCACGTG+AGG | - | 57329:9324-9343 | MS.gene001454:CDS | 60.0% | |
| AGCTTACGGCTCGTGTCCCA+TGG | - | 57329:8161-8180 | MS.gene001454:CDS | 60.0% | |
| CATCGCGGTCAACCCAAACC+AGG | - | 57329:7282-7301 | MS.gene001454:CDS | 60.0% | |
| CCACCGGGTTTCGAAGTAGG+AGG | - | 57329:8649-8668 | MS.gene001454:intron | 60.0% | |
| CCTCCTACTTCGAAACCCGG+TGG | + | 57329:8652-8671 | None:intergenic | 60.0% | |
| CTCGCCGGGCCTTAGAACAA+TGG | - | 57329:7963-7982 | MS.gene001454:intron | 60.0% | |
| GCACGTGAGGCAGGTCGTTA+TGG | - | 57329:9337-9356 | MS.gene001454:CDS | 60.0% | |
| GCCTCACGTGCAGGACAGTT+GGG | + | 57329:9328-9347 | None:intergenic | 60.0% | |
| GCTACTGCAGCGGCAGTTTG+TGG | + | 57329:8778-8797 | None:intergenic | 60.0% | |
| GGGCCTCCTACTTCGAAACC+CGG | + | 57329:8655-8674 | None:intergenic | 60.0% | |
| TAACGACCTGCCTCACGTGC+AGG | + | 57329:9337-9356 | None:intergenic | 60.0% | |
| TCCTGACCCAGTACCAGTGG+TGG | - | 57329:8741-8760 | MS.gene001454:intron | 60.0% | |
| TCGAAACCCGGTGGAACTGC+TGG | + | 57329:8643-8662 | None:intergenic | 60.0% | |
| TGCCTCACGTGCAGGACAGT+TGG | + | 57329:9329-9348 | None:intergenic | 60.0% | |
| ! | TCCACCACTGGTACTGGGTC+AGG | + | 57329:8745-8764 | None:intergenic | 60.0% |
| ! | GTGTTGTGAGTGGCGGAGCC+AGG | - | 57329:7754-7773 | MS.gene001454:CDS | 65.0% |
| ! | TGCGGGAGCTCTAGTGCACC+AGG | + | 57329:7670-7689 | None:intergenic | 65.0% |
| !! | GTTCTAAGGCCCGGCGAGCC+CGG | + | 57329:7961-7980 | None:intergenic | 70.0% |
| !! | TTCTAAGGCCCGGCGAGCCC+GGG | + | 57329:7960-7979 | None:intergenic | 70.0% |
| ! | CCGGAGCCCGGGCGAGTGCC+CGG | - | 57329:7939-7958 | MS.gene001454:CDS | 85.0% |
| ! | CCGGGCACTCGCCCGGGCTC+CGG | + | 57329:7942-7961 | None:intergenic | 85.0% |
| ! | CGGAGCCCGGGCGAGTGCCC+GGG | - | 57329:7940-7959 | MS.gene001454:CDS | 85.0% |
| ! | GCGAGCCCGGGCACTCGCCC+GGG | + | 57329:7948-7967 | None:intergenic | 85.0% |
| ! | GGCGAGCCCGGGCACTCGCC+CGG | + | 57329:7949-7968 | None:intergenic | 85.0% |
| ! | GGCGAGTGCCCGGGCTCGCC+GGG | - | 57329:7949-7968 | MS.gene001454:CDS | 85.0% |
| ! | GGGCGAGTGCCCGGGCTCGC+CGG | - | 57329:7948-7967 | MS.gene001454:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57329 | gene | 7256 | 9364 | 7256 | ID=MS.gene001454 |
| 57329 | mRNA | 7256 | 9364 | 7256 | ID=MS.gene001454.t1;Parent=MS.gene001454 |
| 57329 | exon | 9317 | 9364 | 9317 | ID=MS.gene001454.t1.exon1;Parent=MS.gene001454.t1 |
| 57329 | CDS | 9317 | 9364 | 9317 | ID=cds.MS.gene001454.t1;Parent=MS.gene001454.t1 |
| 57329 | exon | 8142 | 8457 | 8142 | ID=MS.gene001454.t1.exon2;Parent=MS.gene001454.t1 |
| 57329 | CDS | 8142 | 8457 | 8142 | ID=cds.MS.gene001454.t1;Parent=MS.gene001454.t1 |
| 57329 | exon | 7636 | 7976 | 7636 | ID=MS.gene001454.t1.exon3;Parent=MS.gene001454.t1 |
| 57329 | CDS | 7636 | 7976 | 7636 | ID=cds.MS.gene001454.t1;Parent=MS.gene001454.t1 |
| 57329 | exon | 7256 | 7516 | 7256 | ID=MS.gene001454.t1.exon4;Parent=MS.gene001454.t1 |
| 57329 | CDS | 7256 | 7516 | 7256 | ID=cds.MS.gene001454.t1;Parent=MS.gene001454.t1 |
| Gene Sequence |
| Protein sequence |
