AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene001561

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001561.t1 MTR_4g130900 93.373 498 32 1 1 498 1 497 0.0 905
MS.gene001561.t1 MTR_3g056100 37.576 330 167 11 115 425 12 321 1.66e-51 182
MS.gene001561.t1 MTR_3g056100 43.388 242 117 7 186 425 242 465 1.02e-50 182
MS.gene001561.t1 MTR_7g011820 40.136 294 133 8 185 455 226 499 1.41e-50 181
MS.gene001561.t1 MTR_3g056100 36.842 342 166 12 115 425 12 334 9.26e-50 177
MS.gene001561.t1 MTR_5g094430 37.175 269 155 5 156 422 36 292 2.70e-49 175
MS.gene001561.t1 MTR_5g094430 53.731 67 30 1 359 425 65 130 6.76e-15 77.0
MS.gene001561.t1 MTR_3g056100 36.842 342 166 12 115 425 156 478 4.55e-49 178
MS.gene001561.t1 MTR_5g094430 37.175 269 155 5 156 422 58 314 5.54e-49 175
MS.gene001561.t1 MTR_5g094430 53.731 67 30 1 359 425 87 152 6.78e-15 77.4
MS.gene001561.t1 MTR_5g094430 37.175 269 155 5 156 422 170 426 7.33e-49 177
MS.gene001561.t1 MTR_5g094430 53.731 67 30 1 359 425 199 264 4.61e-15 78.2
MS.gene001561.t1 MTR_5g042920 40.000 250 137 7 177 422 142 382 2.72e-48 173
MS.gene001561.t1 MTR_5g042920 54.688 64 28 1 361 424 152 214 1.10e-15 79.7
MS.gene001561.t1 MTR_4g082580 37.261 314 140 11 111 422 82 340 1.03e-46 167
MS.gene001561.t1 MTR_4g082580 44.444 90 44 2 335 423 124 208 9.72e-13 70.1
MS.gene001561.t1 MTR_7g080020 38.652 282 123 7 186 422 279 555 1.00e-44 168
MS.gene001561.t1 MTR_7g080020 44.898 98 52 2 343 440 264 359 6.18e-16 81.3
MS.gene001561.t1 MTR_3g031220 39.526 253 129 5 179 422 190 427 3.27e-44 163
MS.gene001561.t1 MTR_3g031220 52.239 67 31 1 359 425 197 262 9.57e-16 80.1
MS.gene001561.t1 MTR_3g009470 35.986 289 137 7 179 422 272 557 3.42e-44 166
MS.gene001561.t1 MTR_3g009470 49.333 75 33 2 356 426 272 345 6.25e-16 81.3
MS.gene001561.t1 MTR_5g074400 39.286 252 127 6 186 422 242 482 1.41e-43 163
MS.gene001561.t1 MTR_7g100510 35.341 249 156 3 174 420 176 421 4.67e-43 159
MS.gene001561.t1 MTR_7g100510 47.368 76 39 1 359 434 188 262 3.12e-17 84.3
MS.gene001561.t1 MTR_7g080000 37.594 266 129 7 188 422 235 494 2.35e-42 161
MS.gene001561.t1 MTR_7g071120 38.710 248 123 7 186 426 165 390 4.64e-42 157
MS.gene001561.t1 MTR_4g013260 34.137 249 141 4 175 422 172 398 5.82e-38 145
MS.gene001561.t1 MTR_5g097490 36.596 235 132 5 188 420 93 312 2.67e-37 142
MS.gene001561.t1 MTR_3g009470 33.198 247 117 7 179 380 272 515 2.12e-26 112
MS.gene001561.t1 MTR_3g009470 49.333 75 33 2 356 426 272 345 3.19e-16 81.6
MS.gene001561.t1 MTR_3g031220 36.019 211 111 5 179 380 190 385 7.39e-25 106
MS.gene001561.t1 MTR_3g031220 52.239 67 31 1 359 425 197 262 3.38e-16 80.9
MS.gene001561.t1 MTR_5g097500 30.833 240 124 7 188 419 84 289 1.31e-23 101
MS.gene001561.t1 MTR_1g015140 51.316 76 37 0 341 416 83 158 1.14e-21 92.0
MS.gene001561.t1 MTR_2g033820 41.818 110 55 2 343 447 186 291 2.88e-21 95.9
MS.gene001561.t1 MTR_1g077780 39.655 116 62 2 305 419 13 121 7.91e-21 89.4
MS.gene001561.t1 MTR_4g094412 50.000 80 39 1 342 420 216 295 2.05e-20 94.4
MS.gene001561.t1 MTR_4g094412 50.000 80 39 1 342 420 225 304 2.13e-20 94.4
MS.gene001561.t1 MTR_3g104750 52.857 70 33 0 347 416 91 160 3.11e-20 88.2
MS.gene001561.t1 MTR_1g086790 41.489 94 55 0 326 419 124 217 4.89e-20 91.7
MS.gene001561.t1 MTR_4g094588 44.231 104 49 2 346 449 164 258 6.69e-20 91.3
MS.gene001561.t1 MTR_4g107970 50.000 80 39 1 342 420 160 239 6.94e-20 93.2
MS.gene001561.t1 MTR_8g007270 47.945 73 38 0 344 416 138 210 9.02e-20 88.6
MS.gene001561.t1 MTR_4g107970 50.000 80 39 1 342 420 237 316 1.28e-19 92.8
MS.gene001561.t1 MTR_7g109800 38.679 106 65 0 315 420 100 205 1.53e-19 89.7
MS.gene001561.t1 MTR_8g092010 46.250 80 43 0 341 420 89 168 2.13e-19 86.3
MS.gene001561.t1 MTR_7g110720 49.367 79 39 1 342 419 171 249 2.76e-19 90.5
MS.gene001561.t1 MTR_3g095080 47.945 73 38 0 344 416 152 224 2.99e-19 87.4
MS.gene001561.t1 MTR_4g094908 57.895 57 23 1 361 416 267 323 3.37e-19 89.4
MS.gene001561.t1 MTR_4g132430 49.351 77 38 1 344 419 111 187 3.46e-19 89.7
MS.gene001561.t1 MTR_3g095080 47.945 73 38 0 344 416 128 200 3.53e-19 86.7
MS.gene001561.t1 MTR_7g110720 49.367 79 39 1 342 419 198 276 3.70e-19 90.5
MS.gene001561.t1 MTR_3g053330 39.623 106 55 2 344 448 235 332 7.85e-19 89.7
MS.gene001561.t1 MTR_2g045360 30.481 187 117 4 300 482 148 325 8.56e-19 89.4
MS.gene001561.t1 MTR_2g023930 48.052 77 39 1 344 419 289 365 1.15e-18 89.4
MS.gene001561.t1 MTR_4g132430 49.367 79 37 2 344 421 245 321 1.42e-18 89.0
MS.gene001561.t1 MTR_7g009730 48.750 80 40 1 338 416 197 276 1.85e-18 89.0
MS.gene001561.t1 MTR_7g028415 48.000 75 37 1 348 422 81 153 2.56e-18 82.8
MS.gene001561.t1 MTR_7g028710 48.000 75 37 1 348 422 81 153 2.56e-18 82.8
MS.gene001561.t1 MTR_7g062220 47.368 76 39 1 341 416 106 180 3.49e-18 85.9
MS.gene001561.t1 MTR_8g096730 46.154 78 40 1 345 422 55 130 3.79e-18 81.6
MS.gene001561.t1 MTR_5g016610 57.895 57 23 1 361 416 200 256 3.97e-18 84.7
MS.gene001561.t1 MTR_3g095040 33.077 130 84 2 292 420 51 178 3.97e-18 83.2
MS.gene001561.t1 MTR_2g088000 49.351 77 38 1 344 419 333 409 4.02e-18 87.8
MS.gene001561.t1 MTR_5g043880 43.158 95 46 1 324 418 96 182 5.78e-18 84.7
MS.gene001561.t1 MTR_7g079010 44.737 76 42 0 341 416 122 197 6.01e-18 83.2
MS.gene001561.t1 MTR_8g092140 47.297 74 38 1 344 416 143 216 6.85e-18 83.6
MS.gene001561.t1 MTR_5g091390 46.667 75 40 0 346 420 143 217 8.98e-18 84.7
MS.gene001561.t1 MTR_1g099600 43.373 83 45 2 341 422 167 248 3.81e-17 82.8
MS.gene001561.t1 MTR_1g009613 56.140 57 24 1 361 416 263 319 5.36e-17 82.8
MS.gene001561.t1 MTR_1g070455 56.140 57 24 1 361 416 294 350 7.93e-17 82.4
MS.gene001561.t1 MTR_4g122530 54.545 66 30 0 355 420 203 268 1.07e-16 82.8
MS.gene001561.t1 MTR_4g049790 33.103 145 81 5 345 473 297 441 1.37e-16 83.2
MS.gene001561.t1 MTR_4g127040 53.333 60 27 1 358 416 243 302 1.81e-16 80.9
MS.gene001561.t1 MTR_4g007060 37.391 115 57 4 348 458 115 218 3.81e-16 79.3
MS.gene001561.t1 MTR_3g106060 40.506 79 45 2 340 416 117 195 4.30e-16 79.3
MS.gene001561.t1 MTR_4g007060 37.391 115 57 4 348 458 149 252 5.80e-16 79.3
MS.gene001561.t1 MTR_2g083870 48.485 66 33 1 361 425 81 146 8.75e-16 77.8
MS.gene001561.t1 MTR_6g086555 50.769 65 31 1 361 424 207 271 2.07e-15 78.6
MS.gene001561.t1 MTR_4g049760 40.000 95 56 1 330 423 260 354 2.48e-15 79.0
MS.gene001561.t1 MTR_7g109600 46.154 65 34 1 357 420 50 114 3.18e-15 76.3
MS.gene001561.t1 MTR_8g087000 52.381 63 29 1 361 422 78 140 3.60e-15 75.9
MS.gene001561.t1 MTR_8g087000 52.381 63 29 1 361 422 77 139 3.97e-15 75.5
MS.gene001561.t1 MTR_3g108960 52.459 61 28 1 358 417 312 372 6.01e-15 77.0
MS.gene001561.t1 MTR_1g013760 49.123 57 28 1 361 416 141 197 1.06e-14 75.1
MS.gene001561.t1 MTR_2g105060 42.466 73 41 1 348 419 82 154 1.11e-14 74.3
MS.gene001561.t1 MTR_2g105060 47.619 63 32 1 358 419 167 229 1.63e-14 75.1
MS.gene001561.t1 MTR_0117s0040 51.613 62 29 1 358 418 72 133 1.73e-14 73.6
MS.gene001561.t1 MTR_2g024350 46.875 64 33 1 361 423 9 72 4.06e-14 72.4
MS.gene001561.t1 MTR_8g028565 40.000 95 50 3 335 424 126 218 7.22e-14 73.2
MS.gene001561.t1 MTR_1g013790 44.444 63 34 1 358 419 99 161 7.60e-14 72.0
MS.gene001561.t1 MTR_2g016770 46.032 63 33 1 361 422 36 98 8.41e-14 71.2
MS.gene001561.t1 MTR_2g016770 46.032 63 33 1 361 422 28 90 1.20e-13 70.5
MS.gene001561.t1 MTR_1g078260 42.308 78 44 1 347 423 234 311 2.07e-13 72.8
MS.gene001561.t1 MTR_7g079040 46.970 66 34 1 358 422 152 217 2.11e-13 71.6
MS.gene001561.t1 MTR_2g032030 46.269 67 33 2 361 426 268 332 3.93e-13 71.6
MS.gene001561.t1 MTR_8g069935 36.842 95 46 3 326 419 310 391 3.96e-13 72.0
MS.gene001561.t1 MTR_2g032030 46.269 67 33 2 361 426 268 332 4.01e-13 72.0
MS.gene001561.t1 MTR_8g067635 44.444 72 39 1 349 419 338 409 4.62e-13 72.0
MS.gene001561.t1 MTR_8g067650 47.619 63 32 1 358 419 337 399 5.33e-13 71.6
MS.gene001561.t1 MTR_2g024380 46.875 64 33 1 361 423 252 315 6.29e-13 71.2
MS.gene001561.t1 MTR_8g098945 38.000 100 49 4 357 453 126 215 7.31e-13 69.3
MS.gene001561.t1 MTR_5g067680 47.368 57 27 1 361 414 203 259 1.54e-11 66.2
MS.gene001561.t1 MTR_6g053200 37.879 66 40 1 358 422 328 393 1.96e-11 66.6
MS.gene001561.t1 MTR_5g044695 55.556 45 20 0 344 388 61 105 5.44e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001561.t1 AT4G30935 48.692 497 199 16 28 518 20 466 5.73e-125 374
MS.gene001561.t1 AT2G03340 34.000 350 192 10 92 422 148 477 2.61e-50 180
MS.gene001561.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene001561.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene001561.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene001561.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene001561.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene001561.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene001561.t1 AT4G26640 36.525 282 148 5 155 422 3 267 7.73e-48 170
MS.gene001561.t1 AT4G26640 52.239 67 31 1 358 424 33 98 1.14e-14 76.3
MS.gene001561.t1 AT1G13960 38.683 243 140 4 185 419 74 315 8.77e-48 169
MS.gene001561.t1 AT4G26640 36.149 296 154 6 141 422 97 371 9.71e-48 172
MS.gene001561.t1 AT4G26640 52.239 67 31 1 358 424 137 202 1.03e-14 77.0
MS.gene001561.t1 AT4G26640 36.149 296 154 6 141 422 129 403 1.20e-47 173
MS.gene001561.t1 AT4G26640 52.239 67 31 1 358 424 169 234 9.49e-15 77.4
MS.gene001561.t1 AT4G26640 36.149 296 154 6 141 422 169 443 1.77e-47 173
MS.gene001561.t1 AT4G26640 52.239 67 31 1 358 424 209 274 9.43e-15 77.4
MS.gene001561.t1 AT1G13960 34.132 334 200 9 94 419 147 468 2.48e-47 172
MS.gene001561.t1 AT2G38470 38.583 254 123 5 188 422 185 424 3.78e-45 166
MS.gene001561.t1 AT4G26440 38.202 267 128 8 185 422 176 434 5.25e-45 167
MS.gene001561.t1 AT4G26440 45.714 70 37 1 361 430 179 247 3.02e-13 72.8
MS.gene001561.t1 AT5G07100 41.152 243 83 9 186 427 116 299 1.47e-43 157
MS.gene001561.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene001561.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene001561.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene001561.t1 AT5G07100 41.152 243 83 9 186 427 23 206 2.11e-43 153
MS.gene001561.t1 AT2G04880 35.650 331 165 11 122 419 27 342 4.54e-43 159
MS.gene001561.t1 AT2G04880 33.815 346 175 11 122 419 27 366 3.71e-40 152
MS.gene001561.t1 AT2G04880 50.000 60 29 1 361 420 112 170 2.66e-12 69.3
MS.gene001561.t1 AT3G01080 35.443 237 115 5 185 419 165 365 3.26e-36 139
MS.gene001561.t1 AT3G01080 46.753 77 40 1 361 437 168 243 1.09e-14 76.6
MS.gene001561.t1 AT3G01080 35.443 237 115 5 185 419 203 403 3.53e-36 140
MS.gene001561.t1 AT3G01080 46.753 77 40 1 361 437 206 281 9.21e-15 77.0
MS.gene001561.t1 AT2G30250 35.124 242 140 4 186 424 165 392 1.51e-35 137
MS.gene001561.t1 AT2G30250 49.315 73 36 1 359 431 165 236 3.40e-12 68.6
MS.gene001561.t1 AT2G37260 37.743 257 119 9 186 416 84 325 9.24e-34 131
MS.gene001561.t1 AT2G37260 37.743 257 119 9 186 416 82 323 1.14e-33 130
MS.gene001561.t1 AT2G37260 37.743 257 119 9 186 416 164 405 1.68e-33 132
MS.gene001561.t1 AT5G56270 51.020 98 48 0 325 422 452 549 1.31e-26 114
MS.gene001561.t1 AT5G56270 51.515 66 31 1 361 426 274 338 3.47e-15 79.0
MS.gene001561.t1 AT5G56270 32.800 125 81 2 131 253 217 340 1.95e-12 70.5
MS.gene001561.t1 AT4G12020 34.328 201 118 5 187 380 468 661 6.91e-24 107
MS.gene001561.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.70e-12 69.3
MS.gene001561.t1 AT4G12020 34.328 201 118 5 187 380 468 661 6.91e-24 107
MS.gene001561.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.76e-12 69.3
MS.gene001561.t1 AT4G12020 34.328 201 118 5 187 380 468 661 7.05e-24 107
MS.gene001561.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.17e-12 69.3
MS.gene001561.t1 AT4G12020 34.328 201 118 5 187 380 468 661 7.31e-24 106
MS.gene001561.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.07e-12 69.3
MS.gene001561.t1 AT4G12020 34.328 201 118 5 187 380 468 661 8.70e-24 106
MS.gene001561.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.71e-12 69.3
MS.gene001561.t1 AT4G12020 34.328 201 118 5 187 380 468 661 8.70e-24 106
MS.gene001561.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.71e-12 69.3
MS.gene001561.t1 AT4G12020 34.328 201 118 5 187 380 468 661 9.01e-24 106
MS.gene001561.t1 AT4G12020 49.153 59 29 1 361 419 469 526 5.86e-12 69.3
MS.gene001561.t1 AT4G12020 34.328 201 118 5 187 380 468 661 9.14e-24 106
MS.gene001561.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.11e-12 69.3
MS.gene001561.t1 AT4G12020 34.328 201 118 5 187 380 468 661 9.14e-24 106
MS.gene001561.t1 AT4G12020 49.153 59 29 1 361 419 469 526 6.11e-12 69.3
MS.gene001561.t1 AT4G12020 34.328 201 118 5 187 380 401 594 9.98e-24 106
MS.gene001561.t1 AT4G12020 49.153 59 29 1 361 419 402 459 6.63e-12 68.9
MS.gene001561.t1 AT4G12020 34.328 201 118 5 187 380 468 661 1.89e-23 105
MS.gene001561.t1 AT4G12020 49.153 59 29 1 361 419 469 526 8.52e-12 68.6
MS.gene001561.t1 AT1G55600 45.679 81 44 0 339 419 286 366 1.59e-20 95.1
MS.gene001561.t1 AT5G49520 42.105 95 54 1 344 437 205 299 2.36e-20 93.6
MS.gene001561.t1 AT5G41570 47.368 76 40 0 341 416 79 154 2.77e-20 89.0
MS.gene001561.t1 AT1G69310 43.878 98 49 1 344 441 131 222 4.00e-20 91.3
MS.gene001561.t1 AT1G69310 43.878 98 49 1 344 441 131 222 4.00e-20 91.3
MS.gene001561.t1 AT1G69310 43.878 98 49 1 344 441 131 222 4.00e-20 91.3
MS.gene001561.t1 AT5G26170 54.839 62 28 0 355 416 108 169 1.14e-19 87.0
MS.gene001561.t1 AT2G23320 61.404 57 21 1 361 416 241 297 1.33e-19 90.1
MS.gene001561.t1 AT2G44745 43.023 86 49 0 331 416 116 201 1.69e-19 87.8
MS.gene001561.t1 AT5G13080 47.368 76 38 1 347 422 54 127 1.83e-19 85.5
MS.gene001561.t1 AT4G04450 43.689 103 49 3 344 445 182 276 2.59e-19 90.9
MS.gene001561.t1 AT5G15130 39.823 113 63 2 344 455 169 277 3.36e-19 90.9
MS.gene001561.t1 AT1G68150 47.619 84 43 1 338 420 213 296 3.66e-19 89.7
MS.gene001561.t1 AT5G15130 39.823 113 63 2 344 455 211 319 4.10e-19 90.9
MS.gene001561.t1 AT1G64000 48.571 70 36 0 347 416 101 170 4.69e-19 85.9
MS.gene001561.t1 AT2G24570 50.000 78 38 1 361 437 244 321 4.88e-19 88.6
MS.gene001561.t1 AT4G04450 43.689 103 49 3 344 445 276 370 6.40e-19 90.1
MS.gene001561.t1 AT4G18170 44.828 87 46 1 340 426 152 236 8.54e-19 87.8
MS.gene001561.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene001561.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene001561.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene001561.t1 AT4G22070 49.351 77 38 1 344 419 281 357 8.80e-19 89.7
MS.gene001561.t1 AT3G01970 48.571 70 36 0 347 416 52 121 1.11e-18 83.2
MS.gene001561.t1 AT4G24240 56.667 60 25 1 358 416 279 338 1.53e-18 87.8
MS.gene001561.t1 AT4G39410 49.315 73 37 0 344 416 207 279 1.64e-18 86.7
MS.gene001561.t1 AT4G01720 49.367 79 39 1 342 419 221 299 3.23e-18 87.8
MS.gene001561.t1 AT1G62300 49.367 79 37 2 344 421 296 372 3.66e-18 88.2
MS.gene001561.t1 AT3G04670 57.895 57 23 1 361 416 263 319 4.55e-18 85.9
MS.gene001561.t1 AT4G31550 58.621 58 23 1 361 417 247 304 5.35e-18 85.5
MS.gene001561.t1 AT4G31550 58.621 58 23 1 361 417 246 303 5.38e-18 85.5
MS.gene001561.t1 AT5G28650 57.895 57 23 1 361 416 263 319 9.84e-18 84.7
MS.gene001561.t1 AT5G43290 51.613 62 30 0 357 418 111 172 1.08e-17 83.6
MS.gene001561.t1 AT5G46350 38.739 111 55 4 361 468 184 284 1.16e-17 84.7
MS.gene001561.t1 AT2G47260 52.381 63 30 0 361 423 175 237 1.32e-17 84.7
MS.gene001561.t1 AT1G29860 46.988 83 40 2 361 441 137 217 1.83e-17 83.2
MS.gene001561.t1 AT5G64810 49.206 63 32 0 356 418 106 168 1.85e-17 81.3
MS.gene001561.t1 AT2G46130 46.053 76 41 0 341 416 11 86 2.27e-17 78.2
MS.gene001561.t1 AT3G62340 47.436 78 41 0 343 420 101 178 1.33e-16 80.5
MS.gene001561.t1 AT1G29280 48.529 68 34 1 354 420 68 135 5.34e-16 78.6
MS.gene001561.t1 AT1G18860 46.835 79 39 2 344 421 223 299 9.70e-16 80.5
MS.gene001561.t1 AT2G30590 52.632 57 26 1 361 416 314 370 1.33e-15 79.0
MS.gene001561.t1 AT1G69310 40.816 98 48 2 344 441 131 218 1.95e-15 77.4
MS.gene001561.t1 AT2G21900 49.153 59 30 0 361 419 110 168 3.48e-15 74.7
MS.gene001561.t1 AT3G01080 46.753 77 40 1 361 437 206 281 4.40e-15 77.0
MS.gene001561.t1 AT4G31800 45.000 60 32 1 361 419 112 171 1.52e-14 73.9
MS.gene001561.t1 AT5G52830 50.000 64 31 1 358 420 163 226 1.79e-14 75.1
MS.gene001561.t1 AT4G23550 29.814 161 86 3 263 422 69 203 1.85e-14 74.7
MS.gene001561.t1 AT4G31800 45.000 60 32 1 361 419 177 236 1.97e-14 74.7
MS.gene001561.t1 AT4G01250 45.000 80 40 3 347 425 116 192 4.24e-14 73.6
MS.gene001561.t1 AT2G25000 45.000 60 32 1 361 419 104 163 5.63e-14 72.0
MS.gene001561.t1 AT2G25000 45.000 60 32 1 361 419 104 163 5.63e-14 72.0
MS.gene001561.t1 AT1G80840 38.356 73 44 1 348 419 134 206 6.65e-14 73.2
MS.gene001561.t1 AT1G69810 45.570 79 41 2 344 420 129 207 8.31e-14 73.2
MS.gene001561.t1 AT1G69810 45.570 79 41 2 344 420 187 265 8.70e-14 73.6
MS.gene001561.t1 AT2G25000 45.000 60 32 1 361 419 126 185 1.24e-13 71.2
MS.gene001561.t1 AT2G25000 45.000 60 32 1 361 419 147 206 1.36e-13 71.6
MS.gene001561.t1 AT3G58710 47.761 67 34 1 354 419 65 131 1.57e-13 71.2
MS.gene001561.t1 AT2G34830 43.421 76 39 3 352 426 208 280 1.62e-13 73.2
MS.gene001561.t1 AT3G58710 47.761 67 34 1 354 419 64 130 1.64e-13 71.2
MS.gene001561.t1 AT2G34830 43.421 76 39 3 352 426 217 289 1.71e-13 72.8
MS.gene001561.t1 AT1G30650 43.056 72 39 2 352 422 210 280 9.74e-13 70.5
MS.gene001561.t1 AT2G46130 42.105 76 40 1 341 416 11 82 1.54e-12 64.3
MS.gene001561.t1 AT5G45050 45.588 68 34 2 359 425 1040 1105 3.02e-11 67.0
MS.gene001561.t1 AT5G45050 45.588 68 34 2 359 425 1179 1244 3.10e-11 67.0
MS.gene001561.t1 AT5G45050 45.588 68 34 2 359 425 1151 1216 3.11e-11 66.6

Find 130 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAACCGAATTCAGCGTATT+AGG 0.178386 8.4:-3046954 None:intergenic
GGATTCAACTGGCGGAAATA+TGG 0.214937 8.4:+3048327 MS.gene001561:CDS
CCAAAGATGGAAAAGCAATT+AGG 0.223190 8.4:-3046806 None:intergenic
GGTTGTCAAATCCGAAATTA+AGG 0.234424 8.4:+3046971 MS.gene001561:CDS
ACGCGGACTTGCCTTCGTTT+TGG 0.267382 8.4:-3048732 None:intergenic
CAACCGAATTCAGCGTATTA+GGG 0.297461 8.4:-3046953 None:intergenic
CAAAGATGGAAAAGCAATTA+GGG 0.304686 8.4:-3046805 None:intergenic
AAATTATCTAACCTTAATTT+CGG 0.308223 8.4:-3046982 None:intergenic
CCGGGGAAGCCAAGGACCTT+GGG 0.325495 8.4:+3051131 MS.gene001561:CDS
CGGCCTGAGCTGAAGGTTCC+TGG 0.331309 8.4:-3048083 None:intergenic
GGATACCGATGGCGCAAGTA+TGG 0.334207 8.4:+3048962 MS.gene001561:CDS
AGGTGTTTCTTCTTGAGCTT+TGG 0.353643 8.4:-3048619 None:intergenic
CGCAAACTTACTTTCCCTAA+TGG 0.358180 8.4:-3048514 None:intergenic
GCGCAAGTATGGACAGAAAA+TGG 0.361245 8.4:+3048973 MS.gene001561:CDS
ACTCAACTGCAAATTATTCA+TGG 0.361645 8.4:-3051041 None:intergenic
GCAGGAGATGTGGGGATATC+TGG 0.371320 8.4:+3048935 MS.gene001561:CDS
CAGGTTCTCGAAGCTATTAC+AGG 0.382750 8.4:+3048376 MS.gene001561:CDS
ACGGAAGATTAGTTCCATTA+GGG 0.383627 8.4:+3048500 MS.gene001561:CDS
ATTGAATGCTGGGATCATTC+AGG 0.394765 8.4:+3048429 MS.gene001561:CDS
AGACATATTCTGTATTTGTA+TGG 0.407890 8.4:-3048199 None:intergenic
CACGGAAGATTAGTTCCATT+AGG 0.408040 8.4:+3048499 MS.gene001561:CDS
TGCTGCATGTACAACAAACT+TGG 0.409694 8.4:-3048915 None:intergenic
CCATCAGATGATGGTGTCCT+TGG 0.410812 8.4:-3048306 None:intergenic
CCCAAGGTCCTTGGCTTCCC+CGG 0.414124 8.4:-3051131 None:intergenic
GGTGGGCCGTGTCGTTTCTT+CGG 0.415960 8.4:-3050923 None:intergenic
TTCTTGAGCTTTGGAAGATG+TGG 0.417147 8.4:-3048610 None:intergenic
GTCTCAATGTGCTTTCGAAC+AGG 0.417742 8.4:-3050833 None:intergenic
TGGGCACAGCAAATTATTCA+TGG 0.422354 8.4:-3050981 None:intergenic
TGTCTTCTGTTTCTGTTCCA+AGG 0.425869 8.4:+3048289 MS.gene001561:CDS
ACCGGGGAAGCCAAGGACCT+TGG 0.430810 8.4:+3051130 MS.gene001561:CDS
AATCCCTAATACGCTGAATT+CGG 0.433253 8.4:+3046950 MS.gene001561:CDS
CTCTGCAGTCGGTTCGTTGG+AGG 0.433498 8.4:-3048538 None:intergenic
ATCAGAAAATTTCTACTCAA+TGG 0.437791 8.4:+3051083 MS.gene001561:CDS
GGTGCTGCAGCAGCCACAAG+AGG 0.441768 8.4:-3050953 None:intergenic
ATATTCTGTATTTGTATGGT+TGG 0.451171 8.4:-3048195 None:intergenic
TTCCCCGGTTAGTTCTCCTT+CGG 0.452841 8.4:-3051116 None:intergenic
TACTACAGATGCACTTCTGC+TGG 0.452929 8.4:+3050806 MS.gene001561:CDS
GTGGATGGATCAGAATCTTT+CGG 0.455352 8.4:-3048591 None:intergenic
CCGTGTCGTTTCTTCGGCAC+AGG 0.460742 8.4:-3050917 None:intergenic
TGCTAAAAGAGAAGCTGTCC+AGG 0.461739 8.4:+3048065 MS.gene001561:CDS
GATTCAACTGGCGGAAATAT+GGG 0.464037 8.4:+3048328 MS.gene001561:CDS
TCTGTCCATACTTGCGCCAT+CGG 0.468804 8.4:-3048967 None:intergenic
CGTTGATCCAAAACCAAAGA+TGG 0.472386 8.4:-3046819 None:intergenic
AGAAGCTGAGTGGGTCCCAC+AGG 0.472843 8.4:-3046666 None:intergenic
TGCTCTTCGGCCTGAGCTGA+AGG 0.475117 8.4:-3048090 None:intergenic
TAATTTGCAGTTGAGTAAAC+CGG 0.477622 8.4:+3051048 MS.gene001561:CDS
GTTCTCTGCAGTCGGTTCGT+TGG 0.479965 8.4:-3048541 None:intergenic
GAATCTTTCGGAGCATTGAC+AGG 0.481035 8.4:-3048579 None:intergenic
TGTATTTGTATGGTTGGACT+AGG 0.483789 8.4:-3048189 None:intergenic
TCATCTGATATCAATGGTAA+TGG 0.485405 8.4:+3048669 MS.gene001561:CDS
GACACCGAAGGAGAACTAAC+CGG 0.487157 8.4:+3051112 MS.gene001561:CDS
GCTGACGGTGATTCGCCGAC+TGG 0.493066 8.4:-3046726 None:intergenic
TGTCCAGGAACCTTCAGCTC+AGG 0.494745 8.4:+3048080 MS.gene001561:CDS
AAAGACCTTTACCTGGGATG+TGG 0.496114 8.4:-3049007 None:intergenic
TCTGCAGTCGGTTCGTTGGA+GGG 0.497315 8.4:-3048537 None:intergenic
TGCTAAGAAGATTGAATGCT+GGG 0.499049 8.4:+3048419 MS.gene001561:CDS
CATCATCTGATGGATTCAAC+TGG 0.499437 8.4:+3048316 MS.gene001561:CDS
CCCACCAAGTGCTCCTCTTG+TGG 0.499953 8.4:+3051000 MS.gene001561:CDS
TGCTGTCATCATAACTTACA+AGG 0.506337 8.4:+3050874 MS.gene001561:CDS
AAGTTTGTTGTACATGCAGC+AGG 0.506685 8.4:+3048917 MS.gene001561:CDS
GTCTCCGAAGCTCTCCCTGT+GGG 0.511729 8.4:+3046651 MS.gene001561:CDS
CAGAAAGGAGAAAGGTGACT+TGG 0.514032 8.4:+3048856 MS.gene001561:intron
CCCACCAAGTGCTCCTCTTG+TGG 0.523692 8.4:+3050940 MS.gene001561:CDS
ACACCGAAGGAGAACTAACC+GGG 0.523728 8.4:+3051113 MS.gene001561:CDS
GGGTCCCACAGGGAGAGCTT+CGG 0.524421 8.4:-3046655 None:intergenic
CAAAACTCATCTGATATCAA+TGG 0.525848 8.4:+3048663 MS.gene001561:CDS
TGGACCTCTTGAAAATGAAA+AGG 0.527268 8.4:+3048038 MS.gene001561:CDS
TGCAAATTATTCATGGAGGC+AGG 0.533719 8.4:-3051034 None:intergenic
AGCAAATTATTCATGGAGGC+AGG 0.536158 8.4:-3050974 None:intergenic
GCCACAAGAGGAGCACTTGG+TGG 0.539995 8.4:-3050941 None:intergenic
GCTCGAACGCTTCTGAGCAT+AGG 0.544980 8.4:+3051175 MS.gene001561:CDS
TTTGGTGATAGTTCAGATGG+TGG 0.547468 8.4:-3048138 None:intergenic
TTTCATGCTCAGGAAACGGT+TGG 0.552316 8.4:+3048018 MS.gene001561:intron
TTCTGCGACTCGGTGGCTGA+CGG 0.553411 8.4:-3046741 None:intergenic
GAATTTGGTGATAGTTCAGA+TGG 0.554364 8.4:-3048141 None:intergenic
AGAACTAACCGGGGAAGCCA+AGG 0.555363 8.4:+3051123 MS.gene001561:CDS
GCCACAAGAGGAGCACTTGG+TGG 0.560730 8.4:-3051001 None:intergenic
TAATGGAACTAATCTTCCGT+GGG 0.563190 8.4:-3048497 None:intergenic
TAGCTTCGAGAACCTGTAGT+AGG 0.565059 8.4:-3048369 None:intergenic
CGGGGAAGCCAAGGACCTTG+GGG 0.569355 8.4:+3051132 MS.gene001561:CDS
GCAGCCACAAGAGGAGCACT+TGG 0.569920 8.4:-3050944 None:intergenic
CCACAAGAGGAGCACTTGGT+GGG 0.571996 8.4:-3051000 None:intergenic
GACAGCATCTGAGTTGTCTA+CGG 0.572444 8.4:-3050858 None:intergenic
CCAAGGACACCATCATCTGA+TGG 0.573655 8.4:+3048306 MS.gene001561:CDS
CAGTTGAATCCATCAGATGA+TGG 0.574887 8.4:-3048315 None:intergenic
CAAGTTAAGAGTCCTACTAC+AGG 0.575076 8.4:+3048357 MS.gene001561:CDS
AAGACCTTTACCTGGGATGT+GGG 0.577183 8.4:-3049006 None:intergenic
TGTTCTGGGAGAAGCTGAGT+GGG 0.577794 8.4:-3046675 None:intergenic
GTTGATTTCACAGATGTGCA+AGG 0.578017 8.4:+3046927 MS.gene001561:intron
TGAGCTTTGGAAGATGTGGA+TGG 0.579447 8.4:-3048606 None:intergenic
GCTGCATGTACAACAAACTT+GGG 0.581848 8.4:-3048914 None:intergenic
TTGATAACCAGAAAGGAGAA+AGG 0.582120 8.4:+3048848 MS.gene001561:intron
TTGTATGGTTGGACTAGGAA+CGG 0.583444 8.4:-3048184 None:intergenic
CCACAAGAGGAGCACTTGGT+GGG 0.590936 8.4:-3050940 None:intergenic
AGTCACTTGAAGCTGCTCTT+CGG 0.591198 8.4:-3048103 None:intergenic
GGTGCTGCATCAGCCACAAG+AGG 0.591740 8.4:-3051013 None:intergenic
GTGCTAAGAAGATTGAATGC+TGG 0.592242 8.4:+3048418 MS.gene001561:CDS
CTAATGGAACTAATCTTCCG+TGG 0.592547 8.4:-3048498 None:intergenic
GGAGACGCGATGCTCAGCCA+TGG 0.594531 8.4:-3046634 None:intergenic
GGCGTATTACTAACGATTGG+AGG 0.596429 8.4:-3048222 None:intergenic
GATGTGGGGATATCTGGTGA+TGG 0.598874 8.4:+3048941 MS.gene001561:CDS
TCAGCCACAAGAGGAGCACT+TGG 0.605078 8.4:-3051004 None:intergenic
GTACATGCAGCAGGAGATGT+GGG 0.608887 8.4:+3048926 MS.gene001561:CDS
TGAAGGGTAACCCACATCCC+AGG 0.609054 8.4:+3048996 MS.gene001561:CDS
ACAGGCGTATTACTAACGAT+TGG 0.613651 8.4:-3048225 None:intergenic
AAAACACTGTTCTCTGCAGT+CGG 0.615994 8.4:-3048549 None:intergenic
GTATGGACAGAAAATGGTGA+AGG 0.618010 8.4:+3048979 MS.gene001561:CDS
CATCTGATGGATTCAACTGG+CGG 0.620518 8.4:+3048319 MS.gene001561:CDS
TATGGACAGAAAATGGTGAA+GGG 0.621435 8.4:+3048980 MS.gene001561:CDS
GGTTTCTTGTCAGAACTGCA+AGG 0.624573 8.4:-3048639 None:intergenic
TCTGAATGATGAATTCAGCA+AGG 0.627601 8.4:-3051211 None:intergenic
CGTCTCCGAAGCTCTCCCTG+TGG 0.630117 8.4:+3046650 MS.gene001561:CDS
GGGGAAGCCAAGGACCTTGG+GGG 0.641628 8.4:+3051133 MS.gene001561:CDS
TGGAACAGAAACAGAAGACA+AGG 0.643346 8.4:-3048286 None:intergenic
AATTTCTACTCAATGGTCAG+TGG 0.645416 8.4:+3051090 MS.gene001561:CDS
TTGTTCTGGGAGAAGCTGAG+TGG 0.645709 8.4:-3046676 None:intergenic
CAATGGTCAGTGGACACCGA+AGG 0.651277 8.4:+3051100 MS.gene001561:CDS
TGTACATGCAGCAGGAGATG+TGG 0.652491 8.4:+3048925 MS.gene001561:CDS
GAAGCTGAGTGGGTCCCACA+GGG 0.663562 8.4:-3046665 None:intergenic
GCTGTCATCATAACTTACAA+GGG 0.670071 8.4:+3050875 MS.gene001561:CDS
AATCGTTAGTAATACGCCTG+TGG 0.690746 8.4:+3048227 MS.gene001561:CDS
TACATGCAGCAGGAGATGTG+GGG 0.691459 8.4:+3048927 MS.gene001561:CDS
ACGAGCCAGATCCAAAACGA+AGG 0.695030 8.4:+3048721 MS.gene001561:CDS
TATCTGGTGATGGATACCGA+TGG 0.698652 8.4:+3048951 MS.gene001561:CDS
CCTGTGCCGAAGAAACGACA+CGG 0.708728 8.4:+3050917 MS.gene001561:CDS
ATGGAACTAATCTTCCGTGG+GGG 0.722546 8.4:-3048495 None:intergenic
CAACTGCAAATTATTCATGG+AGG 0.726603 8.4:-3051038 None:intergenic
AATGGAACTAATCTTCCGTG+GGG 0.732859 8.4:-3048496 None:intergenic
CACCGAAGGAGAACTAACCG+GGG 0.738224 8.4:+3051114 MS.gene001561:CDS
GCACAGCAAATTATTCATGG+AGG 0.739037 8.4:-3050978 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAAATAAATTAAACTTA+AGG - chr8.4:3049528-3049547 None:intergenic 10.0%
!! ATATATAAATGTAAGTATAT+TGG + chr8.4:3049911-3049930 MS.gene001561:intron 10.0%
!! ATATTGTTCATAAATTTATA+TGG + chr8.4:3049325-3049344 MS.gene001561:intron 10.0%
!! AAATTATCTAACCTTAATTT+CGG - chr8.4:3046985-3047004 None:intergenic 15.0%
!! AATATTGTCATATTATCTTA+GGG + chr8.4:3049417-3049436 MS.gene001561:intron 15.0%
!! ACAAAATAAATAATAACCAA+AGG - chr8.4:3049065-3049084 None:intergenic 15.0%
!! ATGATAGTATATAAATGTTA+AGG + chr8.4:3049887-3049906 MS.gene001561:intron 15.0%
!! TTAATATCATTCATATAAAC+AGG - chr8.4:3050695-3050714 None:intergenic 15.0%
!! AAATAATATGATTTCATACG+CGG - chr8.4:3048752-3048771 None:intergenic 20.0%
!! ACGGTAATAAAGTTAAAATT+TGG - chr8.4:3047014-3047033 None:intergenic 20.0%
!! AGAAAAGGAAAAAAATTCAA+TGG - chr8.4:3050776-3050795 None:intergenic 20.0%
!! ATATTATGAAAGTTGAGTTT+AGG + chr8.4:3049136-3049155 MS.gene001561:intron 20.0%
!! ATGGATAGAATAAAAAACTT+GGG + chr8.4:3050474-3050493 MS.gene001561:intron 20.0%
!! GAAAAAAATTGTGAATTGTT+TGG + chr8.4:3046905-3046924 MS.gene001561:intron 20.0%
!! GAATATTGTCATATTATCTT+AGG + chr8.4:3049416-3049435 MS.gene001561:intron 20.0%
!! GTGTTAAATTAATACATGAA+AGG + chr8.4:3049760-3049779 MS.gene001561:intron 20.0%
!! TCTGTTTCAATAAAATAACA+CGG - chr8.4:3047033-3047052 None:intergenic 20.0%
!! TGCTTTATAGATTATGAATT+TGG + chr8.4:3047339-3047358 MS.gene001561:intron 20.0%
!! TGTTCATAAATTTATATGGA+TGG + chr8.4:3049329-3049348 MS.gene001561:intron 20.0%
!! TTTATTAGTACAAAATCTAC+AGG + chr8.4:3047802-3047821 MS.gene001561:intron 20.0%
!!! AAAGATTTTGTAACAGAATT+TGG - chr8.4:3048159-3048178 None:intergenic 20.0%
!!! AGTCAAATTTATCTAGAATT+TGG - chr8.4:3049453-3049472 None:intergenic 20.0%
!!! ATTTAATTTGATAACCAGAA+AGG + chr8.4:3048841-3048860 MS.gene001561:intron 20.0%
!!! ATTTTGTGCATGTTTATATT+TGG + chr8.4:3049632-3049651 MS.gene001561:intron 20.0%
!!! TTGAAAAGTTTGTTTGATTA+GGG + chr8.4:3047196-3047215 MS.gene001561:intron 20.0%
!!! TTGCAACTTTTTATTTTTGA+AGG + chr8.4:3049602-3049621 MS.gene001561:intron 20.0%
!!! TTGTTAAATGCTTCTATTTT+TGG + chr8.4:3047380-3047399 MS.gene001561:intron 20.0%
!!! TTGTTTCTTACTTTGAAATA+CGG + chr8.4:3050156-3050175 MS.gene001561:intron 20.0%
!!! TTTTTTTTTGTTGCTGAAAA+AGG - chr8.4:3046880-3046899 None:intergenic 20.0%
! AAAAGCTCAAGAGATAAAAA+AGG + chr8.4:3046701-3046720 MS.gene001561:CDS 25.0%
! AAACAGAAATTATGCATACT+TGG - chr8.4:3049042-3049061 None:intergenic 25.0%
! AAGTTAAGCTAAAACACATA+TGG + chr8.4:3049732-3049751 MS.gene001561:intron 25.0%
! AATTCAAAGTAAGAAACATG+TGG - chr8.4:3050222-3050241 None:intergenic 25.0%
! AGACATATTCTGTATTTGTA+TGG - chr8.4:3048202-3048221 None:intergenic 25.0%
! AGTAGAAAAGAAAGCAAAAA+AGG - chr8.4:3049289-3049308 None:intergenic 25.0%
! ATATTCTGTATTTGTATGGT+TGG - chr8.4:3048198-3048217 None:intergenic 25.0%
! ATCAGAAAATTTCTACTCAA+TGG + chr8.4:3051083-3051102 MS.gene001561:CDS 25.0%
! ATGTTTCTTACTTTGAATTC+CGG + chr8.4:3050223-3050242 MS.gene001561:intron 25.0%
! ATTTCAAAGTAAGAAACAAG+TGG - chr8.4:3050155-3050174 None:intergenic 25.0%
! CATGGATAGAATAAAAAACT+TGG + chr8.4:3050473-3050492 MS.gene001561:intron 25.0%
! CTAAAGAAATCAAATACCTT+GGG - chr8.4:3047984-3048003 None:intergenic 25.0%
! CTGCCACAATTAAAATAAAT+GGG - chr8.4:3048798-3048817 None:intergenic 25.0%
! GATAAATTACTATAGCCTAT+TGG + chr8.4:3049983-3050002 MS.gene001561:intron 25.0%
! GTTACATTCATAGAAGTTTA+CGG - chr8.4:3050372-3050391 None:intergenic 25.0%
! TAGTAGTTTCTGATAAGAAA+AGG - chr8.4:3050791-3050810 None:intergenic 25.0%
! TGATTTCTTTAGCACTAAAT+AGG + chr8.4:3047992-3048011 MS.gene001561:intron 25.0%
! TGGATAGAATAAAAAACTTG+GGG + chr8.4:3050475-3050494 MS.gene001561:intron 25.0%
! TGTTTCACAATTTAACCAAT+AGG - chr8.4:3050001-3050020 None:intergenic 25.0%
!! AAAACTTGAAGTCTCAATTT+TGG - chr8.4:3047657-3047676 None:intergenic 25.0%
!! AAATTCATTCCTCCTTTTTA+TGG - chr8.4:3047523-3047542 None:intergenic 25.0%
!! AATTCATTCCTCCTTTTTAT+GGG - chr8.4:3047522-3047541 None:intergenic 25.0%
!! AGATACATTTTGTAGAACAA+GGG - chr8.4:3050567-3050586 None:intergenic 25.0%
!! ATAATGTGTAATTTGTATCG+TGG + chr8.4:3049938-3049957 MS.gene001561:intron 25.0%
!! ATTCAACTTTTATGCGATTT+TGG - chr8.4:3047605-3047624 None:intergenic 25.0%
!! CTAATCAAACAAACTTTTCA+AGG - chr8.4:3047197-3047216 None:intergenic 25.0%
!! CTTGAAAAGTTTGTTTGATT+AGG + chr8.4:3047195-3047214 MS.gene001561:intron 25.0%
!! GAGTTTTCATCTAACAAATT+AGG + chr8.4:3047853-3047872 MS.gene001561:intron 25.0%
!! GTAGAAATTTTCTGATTTTG+TGG - chr8.4:3051079-3051098 None:intergenic 25.0%
!! GTTTAGGACTTAGTTATTAT+AGG + chr8.4:3047407-3047426 MS.gene001561:intron 25.0%
!! TAGATACATTTTGTAGAACA+AGG - chr8.4:3050568-3050587 None:intergenic 25.0%
!! TAGATTATGAATTTGGAATC+TGG + chr8.4:3047346-3047365 MS.gene001561:intron 25.0%
!! TTCGAATTTTCATTAGAACT+CGG - chr8.4:3046777-3046796 None:intergenic 25.0%
!!! AAATGCTTCTATTTTTGGTA+GGG + chr8.4:3047385-3047404 MS.gene001561:intron 25.0%
!!! AAGCCCATTTATTTTAATTG+TGG + chr8.4:3048792-3048811 MS.gene001561:intron 25.0%
!!! GTAAACAAAAAAAGTACTTC+TGG + chr8.4:3048255-3048274 MS.gene001561:CDS 25.0%
!!! TAAATGCTTCTATTTTTGGT+AGG + chr8.4:3047384-3047403 MS.gene001561:intron 25.0%
!!! TATTTGCCAAACTGATTTTT+CGG + chr8.4:3050657-3050676 MS.gene001561:intron 25.0%
!!! TGAATTCTGAATTTTAACAC+TGG + chr8.4:3047741-3047760 MS.gene001561:intron 25.0%
!!! TGTTTCTTACTTTGAAATAC+GGG + chr8.4:3050157-3050176 MS.gene001561:intron 25.0%
AAAAAGCCGAAAAATCAGTT+TGG - chr8.4:3050666-3050685 None:intergenic 30.0%
AAGAAATACTGTCTTGTCTT+GGG - chr8.4:3047921-3047940 None:intergenic 30.0%
AAGCAGTTTGAAAAATGACA+AGG + chr8.4:3049240-3049259 MS.gene001561:intron 30.0%
AATTCAGCATTTAAGCTACT+GGG - chr8.4:3047727-3047746 None:intergenic 30.0%
ACTCAACTGCAAATTATTCA+TGG - chr8.4:3051044-3051063 None:intergenic 30.0%
ATGGTAGTATTATGTATCCA+TGG + chr8.4:3050594-3050613 MS.gene001561:intron 30.0%
CAAAACTCATCTGATATCAA+TGG + chr8.4:3048663-3048682 MS.gene001561:CDS 30.0%
CAAAATGTATCTATCCATCA+TGG + chr8.4:3050575-3050594 MS.gene001561:intron 30.0%
CAAAGATGGAAAAGCAATTA+GGG - chr8.4:3046808-3046827 None:intergenic 30.0%
CAATATTTACCAACTTACCT+AGG - chr8.4:3050029-3050048 None:intergenic 30.0%
CCTGCCACAATTAAAATAAA+TGG - chr8.4:3048799-3048818 None:intergenic 30.0%
GACAAATTACTATAGCCTAT+AGG + chr8.4:3049787-3049806 MS.gene001561:intron 30.0%
GATACATAATACTACCATGA+TGG - chr8.4:3050592-3050611 None:intergenic 30.0%
GCTAAAGAAATCAAATACCT+TGG - chr8.4:3047985-3048004 None:intergenic 30.0%
GGATAGAATAAAAAACTTGG+GGG + chr8.4:3050476-3050495 MS.gene001561:intron 30.0%
GTACAAATGAAATGTCTATC+CGG + chr8.4:3047772-3047791 MS.gene001561:intron 30.0%
TCATCTGATATCAATGGTAA+TGG + chr8.4:3048669-3048688 MS.gene001561:CDS 30.0%
TCTAACATCAACACATCATA+TGG - chr8.4:3050394-3050413 None:intergenic 30.0%
TGCATAATTTCTGTTTCCTT+TGG + chr8.4:3049046-3049065 MS.gene001561:intron 30.0%
TGGTTAAATTGTGAAACAAG+AGG + chr8.4:3050003-3050022 MS.gene001561:intron 30.0%
TGTTTCTTACTTTGAATTCC+GGG + chr8.4:3050224-3050243 MS.gene001561:intron 30.0%
TTCTCAGATTCAGAACAAAA+AGG - chr8.4:3047295-3047314 None:intergenic 30.0%
TTGAATGTAATACCCTTATG+TGG + chr8.4:3047222-3047241 MS.gene001561:intron 30.0%
! GTTTAACTTAGACCAATAAG+TGG + chr8.4:3049854-3049873 MS.gene001561:intron 30.0%
! TAATTTGCAGTTGAGTAAAC+CGG + chr8.4:3051048-3051067 MS.gene001561:CDS 30.0%
! TGAAGTCTCAATTTTGGATA+TGG - chr8.4:3047651-3047670 None:intergenic 30.0%
! TGTATTTTCTTGAGGAAACA+TGG - chr8.4:3050268-3050287 None:intergenic 30.0%
! TTGATATCAGATGAGTTTTG+TGG - chr8.4:3048663-3048682 None:intergenic 30.0%
! TTGTTCTGAATCTGAGAATA+AGG + chr8.4:3047297-3047316 MS.gene001561:intron 30.0%
! TTTAGGGCATGGTTATAATT+GGG + chr8.4:3047163-3047182 MS.gene001561:intron 30.0%
!! AACAAAAAAAGTACTTCTGG+CGG + chr8.4:3048258-3048277 MS.gene001561:CDS 30.0%
!! ACTTCCTTTTCATTTTCAAG+AGG - chr8.4:3048045-3048064 None:intergenic 30.0%
!! GTTTCTTACTTTGAAATACG+GGG + chr8.4:3050158-3050177 MS.gene001561:intron 30.0%
!! TTTTGACTGATCCCATAAAA+AGG + chr8.4:3047508-3047527 MS.gene001561:intron 30.0%
!! TTTTTCCTTTTACGGATTGT+TGG + chr8.4:3050723-3050742 MS.gene001561:intron 30.0%
!!! AGCTCACTTTTTTCCTTTTA+CGG + chr8.4:3050715-3050734 MS.gene001561:intron 30.0%
!!! CCATTTATTTTAATTGTGGC+AGG + chr8.4:3048796-3048815 MS.gene001561:intron 30.0%
!!! TGGTAAAATAGTTTTGAACG+AGG + chr8.4:3048689-3048708 MS.gene001561:CDS 30.0%
!!! TTCTATTTTTGGTAGGGTTT+AGG + chr8.4:3047391-3047410 MS.gene001561:intron 30.0%
AACAAGAGGCTAAGATAAGT+TGG + chr8.4:3049821-3049840 MS.gene001561:intron 35.0%
AAGATACAGTTCTGTTTCCA+TGG - chr8.4:3050614-3050633 None:intergenic 35.0%
AAGGCAAAAATGCGCTTAAA+AGG + chr8.4:3050293-3050312 MS.gene001561:intron 35.0%
AATAGACCGAAAATCGAAAC+AGG - chr8.4:3047451-3047470 None:intergenic 35.0%
AATCCCTAATACGCTGAATT+CGG + chr8.4:3046950-3046969 MS.gene001561:CDS 35.0%
AATTTCTACTCAATGGTCAG+TGG + chr8.4:3051090-3051109 MS.gene001561:CDS 35.0%
CAACTGCAAATTATTCATGG+AGG - chr8.4:3051041-3051060 None:intergenic 35.0%
CCAAAGATGGAAAAGCAATT+AGG - chr8.4:3046809-3046828 None:intergenic 35.0%
CTCAAGAAAATACACTGGAA+AGG + chr8.4:3050274-3050293 MS.gene001561:intron 35.0%
CTGAAAAAGGATAAACAGAG+TGG - chr8.4:3046867-3046886 None:intergenic 35.0%
GAAAACCAACAATCCGTAAA+AGG - chr8.4:3050731-3050750 None:intergenic 35.0%
GAAGAAATACTGTCTTGTCT+TGG - chr8.4:3047922-3047941 None:intergenic 35.0%
GAATTCAGCATTTAAGCTAC+TGG - chr8.4:3047728-3047747 None:intergenic 35.0%
GAGATAAAAAAGGAACCAGT+CGG + chr8.4:3046711-3046730 MS.gene001561:CDS 35.0%
GATAAACAGAGTGGAAATTG+AGG - chr8.4:3046858-3046877 None:intergenic 35.0%
GCTGTCATCATAACTTACAA+GGG + chr8.4:3050875-3050894 MS.gene001561:CDS 35.0%
GGATTAAACCACTATACCAA+TGG - chr8.4:3050201-3050220 None:intergenic 35.0%
GGTTGTCAAATCCGAAATTA+AGG + chr8.4:3046971-3046990 MS.gene001561:CDS 35.0%
GTTTCCTCAAGAAAATACAC+TGG + chr8.4:3050269-3050288 MS.gene001561:intron 35.0%
GTTTCTTACTTTGAATTCCG+GGG + chr8.4:3050225-3050244 MS.gene001561:intron 35.0%
TAAACCACTATACCAATGGT+AGG - chr8.4:3050197-3050216 None:intergenic 35.0%
TAACTTAGACCAATAAGTGG+CGG + chr8.4:3049857-3049876 MS.gene001561:intron 35.0%
TAATGGAACTAATCTTCCGT+GGG - chr8.4:3048500-3048519 None:intergenic 35.0%
TATGGACAGAAAATGGTGAA+GGG + chr8.4:3048980-3048999 MS.gene001561:CDS 35.0%
TGATCTTCGTGAAGATTCTT+AGG + chr8.4:3047691-3047710 MS.gene001561:intron 35.0%
TGATTAAGCTGAAGCTTCTA+AGG - chr8.4:3047478-3047497 None:intergenic 35.0%
TGCTAAGAAGATTGAATGCT+GGG + chr8.4:3048419-3048438 MS.gene001561:CDS 35.0%
TGCTGTCATCATAACTTACA+AGG + chr8.4:3050874-3050893 MS.gene001561:CDS 35.0%
TGGACCTCTTGAAAATGAAA+AGG + chr8.4:3048038-3048057 MS.gene001561:CDS 35.0%
TGTACTAATAAATGCGCTAC+CGG - chr8.4:3047794-3047813 None:intergenic 35.0%
TGTATGTTATGTACATCCCA+AGG + chr8.4:3047965-3047984 MS.gene001561:intron 35.0%
TGTATTTGTATGGTTGGACT+AGG - chr8.4:3048192-3048211 None:intergenic 35.0%
TGTTTCATAAGCTGACCTAT+AGG - chr8.4:3049805-3049824 None:intergenic 35.0%
TTAGGGCATGGTTATAATTG+GGG + chr8.4:3047164-3047183 MS.gene001561:intron 35.0%
! AATTATGCATACTTGGCTTG+TGG - chr8.4:3049035-3049054 None:intergenic 35.0%
! ACAAACTTGGGTTTCTTTTC+AGG - chr8.4:3048905-3048924 None:intergenic 35.0%
! ACATTTTGTAGAACAAGGGA+TGG - chr8.4:3050563-3050582 None:intergenic 35.0%
! ACGGAAGATTAGTTCCATTA+GGG + chr8.4:3048500-3048519 MS.gene001561:CDS 35.0%
! CTTTCCAGTGTATTTTCTTG+AGG - chr8.4:3050276-3050295 None:intergenic 35.0%
! GAATTTGGTGATAGTTCAGA+TGG - chr8.4:3048144-3048163 None:intergenic 35.0%
! GTTTAGGGCATGGTTATAAT+TGG + chr8.4:3047162-3047181 MS.gene001561:intron 35.0%
! TTGATAACCAGAAAGGAGAA+AGG + chr8.4:3048848-3048867 MS.gene001561:intron 35.0%
! TTTTCTTGAGGAAACATGGT+AGG - chr8.4:3050264-3050283 None:intergenic 35.0%
!! CCTAATTGCTTTTCCATCTT+TGG + chr8.4:3046806-3046825 MS.gene001561:CDS 35.0%
!! GTTTTGGATCAACGTAGTTT+CGG + chr8.4:3046828-3046847 MS.gene001561:CDS 35.0%
!! TAATTCACTTTTCTGCGACT+CGG - chr8.4:3046754-3046773 None:intergenic 35.0%
!! TGCTTTTCCATCTTTGGTTT+TGG + chr8.4:3046812-3046831 MS.gene001561:CDS 35.0%
!! TTTTTGTTTACTTCTGCCAC+AGG - chr8.4:3048246-3048265 None:intergenic 35.0%
!!! CTTGAGCTTTTTGTTGTTCT+GGG - chr8.4:3046692-3046711 None:intergenic 35.0%
!!! GCAGCTTGCAACTTTTTTAT+TGG - chr8.4:3049207-3049226 None:intergenic 35.0%
!!! TAGAGGGGGTCAATTTTTTA+TGG + chr8.4:3050066-3050085 MS.gene001561:intron 35.0%
!!! TCTTGAGCTTTTTGTTGTTC+TGG - chr8.4:3046693-3046712 None:intergenic 35.0%
AAAAAATTGACCCCCTCTAC+TGG - chr8.4:3050065-3050084 None:intergenic 40.0%
AAAACACTGTTCTCTGCAGT+CGG - chr8.4:3048552-3048571 None:intergenic 40.0%
AAATACGGGGTTCGAATCTT+GGG + chr8.4:3050171-3050190 MS.gene001561:intron 40.0%
AAATAGGCCATTTCATGCTC+AGG + chr8.4:3048008-3048027 MS.gene001561:intron 40.0%
AATCGTTAGTAATACGCCTG+TGG + chr8.4:3048227-3048246 MS.gene001561:CDS 40.0%
AATGGAACTAATCTTCCGTG+GGG - chr8.4:3048499-3048518 None:intergenic 40.0%
AATTGTGAAACAAGAGGCCT+AGG + chr8.4:3050009-3050028 MS.gene001561:intron 40.0%
ACAACCGAATTCAGCGTATT+AGG - chr8.4:3046957-3046976 None:intergenic 40.0%
ACAGGCGTATTACTAACGAT+TGG - chr8.4:3048228-3048247 None:intergenic 40.0%
ACATCCACATCCTTAATTCG+AGG + chr8.4:3050439-3050458 MS.gene001561:intron 40.0%
AGCAAATTATTCATGGAGGC+AGG - chr8.4:3050977-3050996 None:intergenic 40.0%
AGCTACACAGTTTCCACATA+AGG - chr8.4:3047238-3047257 None:intergenic 40.0%
AGGTCAGCTTATGAAACAAG+AGG + chr8.4:3049807-3049826 MS.gene001561:intron 40.0%
AGGTGTTTCTTCTTGAGCTT+TGG - chr8.4:3048622-3048641 None:intergenic 40.0%
ATTGAATGCTGGGATCATTC+AGG + chr8.4:3048429-3048448 MS.gene001561:CDS 40.0%
CAACCGAATTCAGCGTATTA+GGG - chr8.4:3046956-3046975 None:intergenic 40.0%
CAAGTTAAGAGTCCTACTAC+AGG + chr8.4:3048357-3048376 MS.gene001561:CDS 40.0%
CACCAGCTTGAATAAGATCT+TGG - chr8.4:3049266-3049285 None:intergenic 40.0%
CAGTTGAATCCATCAGATGA+TGG - chr8.4:3048318-3048337 None:intergenic 40.0%
CGCAAACTTACTTTCCCTAA+TGG - chr8.4:3048517-3048536 None:intergenic 40.0%
CGTTGATCCAAAACCAAAGA+TGG - chr8.4:3046822-3046841 None:intergenic 40.0%
CTAATGGAACTAATCTTCCG+TGG - chr8.4:3048501-3048520 None:intergenic 40.0%
GATTCAACTGGCGGAAATAT+GGG + chr8.4:3048328-3048347 MS.gene001561:CDS 40.0%
GCACAGCAAATTATTCATGG+AGG - chr8.4:3050981-3051000 None:intergenic 40.0%
GCTACACAGTTTCCACATAA+GGG - chr8.4:3047237-3047256 None:intergenic 40.0%
GCTGCATGTACAACAAACTT+GGG - chr8.4:3048917-3048936 None:intergenic 40.0%
GGATGGAAACAGACATGTTT+CGG - chr8.4:3050546-3050565 None:intergenic 40.0%
GTATGGACAGAAAATGGTGA+AGG + chr8.4:3048979-3048998 MS.gene001561:CDS 40.0%
GTGCTAAGAAGATTGAATGC+TGG + chr8.4:3048418-3048437 MS.gene001561:CDS 40.0%
GTGGATAAAGACCTTTACCT+GGG - chr8.4:3049016-3049035 None:intergenic 40.0%
GTGGATGGATCAGAATCTTT+CGG - chr8.4:3048594-3048613 None:intergenic 40.0%
GTTAAACTGAGACCAGTAGA+GGG + chr8.4:3050050-3050069 MS.gene001561:intron 40.0%
TGACTGATCCCATAAAAAGG+AGG + chr8.4:3047511-3047530 MS.gene001561:intron 40.0%
TGATCATTTGCAGTAGTTGC+TGG + chr8.4:3047140-3047159 MS.gene001561:intron 40.0%
TGCAAATTATTCATGGAGGC+AGG - chr8.4:3051037-3051056 None:intergenic 40.0%
TGCTGCATGTACAACAAACT+TGG - chr8.4:3048918-3048937 None:intergenic 40.0%
TGGAACAGAAACAGAAGACA+AGG - chr8.4:3048289-3048308 None:intergenic 40.0%
TGGGCACAGCAAATTATTCA+TGG - chr8.4:3050984-3051003 None:intergenic 40.0%
TGTGGATAAAGACCTTTACC+TGG - chr8.4:3049017-3049036 None:intergenic 40.0%
TGTTAAACTGAGACCAGTAG+AGG + chr8.4:3050049-3050068 MS.gene001561:intron 40.0%
TTAAACTGAGACCAGTAGAG+GGG + chr8.4:3050051-3050070 MS.gene001561:intron 40.0%
! ATAACGTGTAGCTTGTATCG+TGG + chr8.4:3050115-3050134 MS.gene001561:intron 40.0%
! CACGGAAGATTAGTTCCATT+AGG + chr8.4:3048499-3048518 MS.gene001561:CDS 40.0%
! GAGTCTCCTGTTTCGATTTT+CGG + chr8.4:3047442-3047461 MS.gene001561:intron 40.0%
! GTTGATTTCACAGATGTGCA+AGG + chr8.4:3046927-3046946 MS.gene001561:intron 40.0%
! TAGCTTGTATCGTGGTATAG+TGG + chr8.4:3050123-3050142 MS.gene001561:intron 40.0%
! TTGTATGGTTGGACTAGGAA+CGG - chr8.4:3048187-3048206 None:intergenic 40.0%
! TTTGGTGATAGTTCAGATGG+TGG - chr8.4:3048141-3048160 None:intergenic 40.0%
!! AAGTTTGTTGTACATGCAGC+AGG + chr8.4:3048917-3048936 MS.gene001561:CDS 40.0%
!! CATCATCTGATGGATTCAAC+TGG + chr8.4:3048316-3048335 MS.gene001561:CDS 40.0%
!! TGTCTTCTGTTTCTGTTCCA+AGG + chr8.4:3048289-3048308 MS.gene001561:CDS 40.0%
!! TTCTTGAGCTTTGGAAGATG+TGG - chr8.4:3048613-3048632 None:intergenic 40.0%
!! TTGCAGTAGTTGCTGGTTTA+GGG + chr8.4:3047147-3047166 MS.gene001561:intron 40.0%
!! TTTGCAGTAGTTGCTGGTTT+AGG + chr8.4:3047146-3047165 MS.gene001561:intron 40.0%
!!! GTTGCTAAGCTAGTTTTGCA+AGG - chr8.4:3050342-3050361 None:intergenic 40.0%
AAACATGGTAGGCCCAAGAT+TGG - chr8.4:3050253-3050272 None:intergenic 45.0%
AAAGACCTTTACCTGGGATG+TGG - chr8.4:3049010-3049029 None:intergenic 45.0%
AACAAGAGGCCTAGGTAAGT+TGG + chr8.4:3050017-3050036 MS.gene001561:intron 45.0%
AAGACCTTTACCTGGGATGT+GGG - chr8.4:3049009-3049028 None:intergenic 45.0%
AATTCCGGGGTTCCAATCTT+GGG + chr8.4:3050238-3050257 MS.gene001561:intron 45.0%
ACATCCTTAATTCGAGGCGT+CGG + chr8.4:3050445-3050464 MS.gene001561:intron 45.0%
ACCGTTTCCTGAGCATGAAA+TGG - chr8.4:3048018-3048037 None:intergenic 45.0%
AGTCACTTGAAGCTGCTCTT+CGG - chr8.4:3048106-3048125 None:intergenic 45.0%
ATGGAACTAATCTTCCGTGG+GGG - chr8.4:3048498-3048517 None:intergenic 45.0%
CAAGTCACCTTTCTCCTTTC+TGG - chr8.4:3048858-3048877 None:intergenic 45.0%
CAGAAAGGAGAAAGGTGACT+TGG + chr8.4:3048856-3048875 MS.gene001561:intron 45.0%
CAGGTTCTCGAAGCTATTAC+AGG + chr8.4:3048376-3048395 MS.gene001561:CDS 45.0%
CATGTTTCGGTGGTCAGTAA+CGG - chr8.4:3050533-3050552 None:intergenic 45.0%
CATTCGCACATGCTGAACAT+CGG + chr8.4:3050414-3050433 MS.gene001561:intron 45.0%
GAAAACGAGATGCAATGACC+AGG + chr8.4:3047559-3047578 MS.gene001561:intron 45.0%
GAAATACGGGGTTCGAATCT+TGG + chr8.4:3050170-3050189 MS.gene001561:intron 45.0%
GACAGCATCTGAGTTGTCTA+CGG - chr8.4:3050861-3050880 None:intergenic 45.0%
GCCATTTCATGCTCAGGAAA+CGG + chr8.4:3048014-3048033 MS.gene001561:intron 45.0%
GCGCAAGTATGGACAGAAAA+TGG + chr8.4:3048973-3048992 MS.gene001561:CDS 45.0%
GGATTCAACTGGCGGAAATA+TGG + chr8.4:3048327-3048346 MS.gene001561:CDS 45.0%
GGCCAAGATCTTATTCAAGC+TGG + chr8.4:3049261-3049280 MS.gene001561:intron 45.0%
GGCGTATTACTAACGATTGG+AGG - chr8.4:3048225-3048244 None:intergenic 45.0%
GGTTTCTTGTCAGAACTGCA+AGG - chr8.4:3048642-3048661 None:intergenic 45.0%
GTCTCAATGTGCTTTCGAAC+AGG - chr8.4:3050836-3050855 None:intergenic 45.0%
TAAACTGAGACCAGTAGAGG+GGG + chr8.4:3050052-3050071 MS.gene001561:intron 45.0%
TACTACAGATGCACTTCTGC+TGG + chr8.4:3050806-3050825 MS.gene001561:CDS 45.0%
TAGCTTCGAGAACCTGTAGT+AGG - chr8.4:3048372-3048391 None:intergenic 45.0%
TGAGGTACAGATGGAAGTCA+CGG - chr8.4:3050504-3050523 None:intergenic 45.0%
TGCTAAAAGAGAAGCTGTCC+AGG + chr8.4:3048065-3048084 MS.gene001561:CDS 45.0%
TGGAAACAGACATGTTTCGG+TGG - chr8.4:3050543-3050562 None:intergenic 45.0%
TTTCATGCTCAGGAAACGGT+TGG + chr8.4:3048018-3048037 MS.gene001561:intron 45.0%
! TTCTGATTTTGTGGCGAGTC+CGG - chr8.4:3051070-3051089 None:intergenic 45.0%
!! ACTTGCCTTCGTTTTGGATC+TGG - chr8.4:3048729-3048748 None:intergenic 45.0%
!! CATCTGATGGATTCAACTGG+CGG + chr8.4:3048319-3048338 MS.gene001561:CDS 45.0%
!! GAATCTTTCGGAGCATTGAC+AGG - chr8.4:3048582-3048601 None:intergenic 45.0%
!! TATCTGGTGATGGATACCGA+TGG + chr8.4:3048951-3048970 MS.gene001561:CDS 45.0%
!! TGAGCTTTGGAAGATGTGGA+TGG - chr8.4:3048609-3048628 None:intergenic 45.0%
!!! AGCTAGTTTTGCAAGGAGGA+CGG - chr8.4:3050335-3050354 None:intergenic 45.0%
!!! CGGATCTTTTGAGGTACAGA+TGG - chr8.4:3050513-3050532 None:intergenic 45.0%
!!! GCTAAGCTAGTTTTGCAAGG+AGG - chr8.4:3050339-3050358 None:intergenic 45.0%
!!! GGTCAGTAACGGATCTTTTG+AGG - chr8.4:3050522-3050541 None:intergenic 45.0%
ACACCGAAGGAGAACTAACC+GGG + chr8.4:3051113-3051132 MS.gene001561:CDS 50.0%
ACGAGCCAGATCCAAAACGA+AGG + chr8.4:3048721-3048740 MS.gene001561:CDS 50.0%
ATCCATGCTCCGCCACTTAT+TGG - chr8.4:3049869-3049888 None:intergenic 50.0%
CCAAGGACACCATCATCTGA+TGG + chr8.4:3048306-3048325 MS.gene001561:CDS 50.0%
CTATTGCTTTCTCACCCCCA+AGG - chr8.4:3051150-3051169 None:intergenic 50.0%
GAATTCCGGGGTTCCAATCT+TGG + chr8.4:3050237-3050256 MS.gene001561:intron 50.0%
GACACCGAAGGAGAACTAAC+CGG + chr8.4:3051112-3051131 MS.gene001561:CDS 50.0%
GACGCCTCGAATTAAGGATG+TGG - chr8.4:3050446-3050465 None:intergenic 50.0%
GATGTGGGGATATCTGGTGA+TGG + chr8.4:3048941-3048960 MS.gene001561:CDS 50.0%
GTAACCCACATCCCAGGTAA+AGG + chr8.4:3049002-3049021 MS.gene001561:intron 50.0%
GTACATGCAGCAGGAGATGT+GGG + chr8.4:3048926-3048945 MS.gene001561:CDS 50.0%
TACATGCAGCAGGAGATGTG+GGG + chr8.4:3048927-3048946 MS.gene001561:CDS 50.0%
TCGAATCTTGGGCCTACCAT+TGG + chr8.4:3050182-3050201 MS.gene001561:intron 50.0%
TCTGTCCATACTTGCGCCAT+CGG - chr8.4:3048970-3048989 None:intergenic 50.0%
TGGGCCTACCATTGGTATAG+TGG + chr8.4:3050190-3050209 MS.gene001561:intron 50.0%
TGTACATGCAGCAGGAGATG+TGG + chr8.4:3048925-3048944 MS.gene001561:CDS 50.0%
! CCATCAGATGATGGTGTCCT+TGG - chr8.4:3048309-3048328 None:intergenic 50.0%
! TTCCCCGGTTAGTTCTCCTT+CGG - chr8.4:3051119-3051138 None:intergenic 50.0%
!! GTAGTTGCTGGTTTAGGGCA+TGG + chr8.4:3047152-3047171 MS.gene001561:intron 50.0%
!! TGTTCTGGGAGAAGCTGAGT+GGG - chr8.4:3046678-3046697 None:intergenic 50.0%
!! TTCACTTTTCTGCGACTCGG+TGG - chr8.4:3046751-3046770 None:intergenic 50.0%
!! TTGTTCTGGGAGAAGCTGAG+TGG - chr8.4:3046679-3046698 None:intergenic 50.0%
!!! CTAGTTTTGCAAGGAGGACG+GGG - chr8.4:3050333-3050352 None:intergenic 50.0%
!!! GCTAGTTTTGCAAGGAGGAC+GGG - chr8.4:3050334-3050353 None:intergenic 50.0%
AGAACTAACCGGGGAAGCCA+AGG + chr8.4:3051123-3051142 MS.gene001561:CDS 55.0%
AGCACAGTCATGATCCCCCA+CGG + chr8.4:3048481-3048500 MS.gene001561:CDS 55.0%
CAATGGTCAGTGGACACCGA+AGG + chr8.4:3051100-3051119 MS.gene001561:CDS 55.0%
CACCGAAGGAGAACTAACCG+GGG + chr8.4:3051114-3051133 MS.gene001561:CDS 55.0%
CACTTTGTAGCCAGAGAGCC+TGG - chr8.4:3047580-3047599 None:intergenic 55.0%
CCTGTGCCGAAGAAACGACA+CGG + chr8.4:3050917-3050936 MS.gene001561:CDS 55.0%
GATGCAATGACCAGGCTCTC+TGG + chr8.4:3047567-3047586 MS.gene001561:intron 55.0%
GCAGGAGATGTGGGGATATC+TGG + chr8.4:3048935-3048954 MS.gene001561:CDS 55.0%
GCTCGAACGCTTCTGAGCAT+AGG + chr8.4:3051175-3051194 MS.gene001561:CDS 55.0%
GGATACCGATGGCGCAAGTA+TGG + chr8.4:3048962-3048981 MS.gene001561:CDS 55.0%
TAGGCCCAAGATTGGAACCC+CGG - chr8.4:3050245-3050264 None:intergenic 55.0%
TGAAGGGTAACCCACATCCC+AGG + chr8.4:3048996-3049015 MS.gene001561:CDS 55.0%
TGTCCAGGAACCTTCAGCTC+AGG + chr8.4:3048080-3048099 MS.gene001561:CDS 55.0%
TTTCTCACCCCCAAGGTCCT+TGG - chr8.4:3051143-3051162 None:intergenic 55.0%
! ACGCGGACTTGCCTTCGTTT+TGG - chr8.4:3048735-3048754 None:intergenic 55.0%
! GACCAATAAGTGGCGGAGCA+TGG + chr8.4:3049864-3049883 MS.gene001561:intron 55.0%
!! AGCACCGACGCCTCGAATTA+AGG - chr8.4:3050452-3050471 None:intergenic 55.0%
!! CCACAAGAGGAGCACTTGGT+GGG - chr8.4:3050943-3050962 None:intergenic 55.0%
!! GTTCTCTGCAGTCGGTTCGT+TGG - chr8.4:3048544-3048563 None:intergenic 55.0%
!! TCAGCCACAAGAGGAGCACT+TGG - chr8.4:3051007-3051026 None:intergenic 55.0%
!! TCTGCAGTCGGTTCGTTGGA+GGG - chr8.4:3048540-3048559 None:intergenic 55.0%
AGAAGCTGAGTGGGTCCCAC+AGG - chr8.4:3046669-3046688 None:intergenic 60.0%
CCCACCAAGTGCTCCTCTTG+TGG + chr8.4:3050940-3050959 MS.gene001561:CDS 60.0%
GAAGCTGAGTGGGTCCCACA+GGG - chr8.4:3046668-3046687 None:intergenic 60.0%
GTCTCCGAAGCTCTCCCTGT+GGG + chr8.4:3046651-3046670 MS.gene001561:CDS 60.0%
TGCTCTTCGGCCTGAGCTGA+AGG - chr8.4:3048093-3048112 None:intergenic 60.0%
TTGCAAGGAGGACGGGGACT+TGG - chr8.4:3050327-3050346 None:intergenic 60.0%
! GGTGCTGCATCAGCCACAAG+AGG - chr8.4:3051016-3051035 None:intergenic 60.0%
!! CCGTGTCGTTTCTTCGGCAC+AGG - chr8.4:3050920-3050939 None:intergenic 60.0%
!! CTCTGCAGTCGGTTCGTTGG+AGG - chr8.4:3048541-3048560 None:intergenic 60.0%
!! GCAGCCACAAGAGGAGCACT+TGG - chr8.4:3050947-3050966 None:intergenic 60.0%
!! GCCACAAGAGGAGCACTTGG+TGG - chr8.4:3050944-3050963 None:intergenic 60.0%
!! GGTGGGCCGTGTCGTTTCTT+CGG - chr8.4:3050926-3050945 None:intergenic 60.0%
!! TTCGAGGCGTCGGTGCTACA+TGG + chr8.4:3050455-3050474 MS.gene001561:intron 60.0%
!! TTCTGCGACTCGGTGGCTGA+CGG - chr8.4:3046744-3046763 None:intergenic 60.0%
ACCGGGGAAGCCAAGGACCT+TGG + chr8.4:3051130-3051149 MS.gene001561:CDS 65.0%
CCCAAGGTCCTTGGCTTCCC+CGG - chr8.4:3051134-3051153 None:intergenic 65.0%
CCGGGGAAGCCAAGGACCTT+GGG + chr8.4:3051131-3051150 MS.gene001561:CDS 65.0%
CGGCCTGAGCTGAAGGTTCC+TGG - chr8.4:3048086-3048105 None:intergenic 65.0%
CGGGGAAGCCAAGGACCTTG+GGG + chr8.4:3051132-3051151 MS.gene001561:CDS 65.0%
CGTCTCCGAAGCTCTCCCTG+TGG + chr8.4:3046650-3046669 MS.gene001561:CDS 65.0%
GCTGACGGTGATTCGCCGAC+TGG - chr8.4:3046729-3046748 None:intergenic 65.0%
GGGGAAGCCAAGGACCTTGG+GGG + chr8.4:3051133-3051152 MS.gene001561:CDS 65.0%
GGGTCCCACAGGGAGAGCTT+CGG - chr8.4:3046658-3046677 None:intergenic 65.0%
! GGTGCTGCAGCAGCCACAAG+AGG - chr8.4:3050956-3050975 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 3046636 3051219 3046636 ID=MS.gene001561
chr8.4 mRNA 3046636 3051219 3046636 ID=MS.gene001561.t1;Parent=MS.gene001561
chr8.4 exon 3046636 3046849 3046636 ID=MS.gene001561.t1.exon1;Parent=MS.gene001561.t1
chr8.4 CDS 3046636 3046849 3046636 ID=cds.MS.gene001561.t1;Parent=MS.gene001561.t1
chr8.4 exon 3046940 3046992 3046940 ID=MS.gene001561.t1.exon2;Parent=MS.gene001561.t1
chr8.4 CDS 3046940 3046992 3046940 ID=cds.MS.gene001561.t1;Parent=MS.gene001561.t1
chr8.4 exon 3048030 3048742 3048030 ID=MS.gene001561.t1.exon3;Parent=MS.gene001561.t1
chr8.4 CDS 3048030 3048742 3048030 ID=cds.MS.gene001561.t1;Parent=MS.gene001561.t1
chr8.4 exon 3048859 3049017 3048859 ID=MS.gene001561.t1.exon4;Parent=MS.gene001561.t1
chr8.4 CDS 3048859 3049017 3048859 ID=cds.MS.gene001561.t1;Parent=MS.gene001561.t1
chr8.4 exon 3050802 3051219 3050802 ID=MS.gene001561.t1.exon5;Parent=MS.gene001561.t1
chr8.4 CDS 3050802 3051219 3050802 ID=cds.MS.gene001561.t1;Parent=MS.gene001561.t1
Gene Sequence

>MS.gene001561

ATGGCTGAGCATCGCGTCTCCGAAGCTCTCCCTGTGGGACCCACTCAGCTTCTCCCAGAACAACAAAAAGCTCAAGAGATAAAAAAGGAACCAGTCGGCGAATCACCGTCAGCCACCGAGTCGCAGAAAAGTGAATTACCGAGTTCTAATGAAAATTCGAATTCAGAAACCCTAATTGCTTTTCCATCTTTGGTTTTGGATCAACGTAGTTTCGGTACGCCTCAATTTCCACTCTGTTTATCCTTTTTCAGCAACAAAAAAAAAATTAAGAAAAAAATTGTGAATTGTTTGGTTGATTTCACAGATGTGCAAGGAATCCCTAATACGCTGAATTCGGTTGTCAAATCCGAAATTAAGGTTAGATAATTTATTGTACCAAATTTTAACTTTATTACCGTGTTATTTTATTGAAACAGATTTTAGTTAAACGTGCGATCGTTCAATTTTTTGTGAATTTTTTATATAGAATTTTTAATTTTTAGTTTTTTTATTGCATACTTTGCTTGATCATTTGCAGTAGTTGCTGGTTTAGGGCATGGTTATAATTGGGGAATTCGACCTTGAAAAGTTTGTTTGATTAGGGTTTTTGAATGTAATACCCTTATGTGGAAACTGTGTAGCTTTCACTGAAAATTTTGAAACAAATTAATTACTCTCCTTTTTGTTCTGAATCTGAGAATAAGGCAGTAGTACTGTTAGTTTCTGCTTTATAGATTATGAATTTGGAATCTGGATTGAAAATGATTGTTAAATGCTTCTATTTTTGGTAGGGTTTAGGACTTAGTTATTATAGGAAAAGACTTACTGAGTCTCCTGTTTCGATTTTCGGTCTATTTAAGCCTTAGAAGCTTCAGCTTAATCATGAACTTAAATTTTGACTGATCCCATAAAAAGGAGGAATGAATTTACTTAAATTTTGAAGAGAAAACGAGATGCAATGACCAGGCTCTCTGGCTACAAAGTGATCCAAAATCGCATAAAAGTTGAATCACTTGATGTGTTTAATGATAGACCATATCCAAAATTGAGACTTCAAGTTTTATGTAACTCATTTATGATCTTCGTGAAGATTCTTAGGATTCTTTTTTCCCAGTAGCTTAAATGCTGAATTCTGAATTTTAACACTGGCATATGATGTACAAATGAAATGTCTATCCGGTAGCGCATTTATTAGTACAAAATCTACAGGTTTCAATTGACAGAGATATACATTTCTTGAGTTTTCATCTAACAAATTAGGTTTTTATAGTAATATTTGATTGCTTTTCTTGAATGAACAATTCCCAAGACAAGACAGTATTTCTTCATTCAAATTAAGCATAAAAAAATTGTATGTTATGTACATCCCAAGGTATTTGATTTCTTTAGCACTAAATAGGCCATTTCATGCTCAGGAAACGGTTGGACCTCTTGAAAATGAAAAGGAAGTTGCTAAAAGAGAAGCTGTCCAGGAACCTTCAGCTCAGGCCGAAGAGCAGCTTCAAGTGACTGTGTCTTCAAATCCACCATCTGAACTATCACCAAATTCTGTTACAAAATCTTTATCATCCGTTCCTAGTCCAACCATACAAATACAGAATATGTCTCCTCCAATCGTTAGTAATACGCCTGTGGCAGAAGTAAACAAAAAAAGTACTTCTGGCGGTAGAGCCTTGTCTTCTGTTTCTGTTCCAAGGACACCATCATCTGATGGATTCAACTGGCGGAAATATGGGCAGAAGCAAGTTAAGAGTCCTACTACAGGTTCTCGAAGCTATTACAGGTGTACTCAATCAAACTGTTGTGCTAAGAAGATTGAATGCTGGGATCATTCAGGTCATGTGATAGAGACTGTTTATAAAAGTGAGCACAGTCATGATCCCCCACGGAAGATTAGTTCCATTAGGGAAAGTAAGTTTGCGCCCTCCAACGAACCGACTGCAGAGAACAGTGTTTTAGTGAAGCCTGTCAATGCTCCGAAAGATTCTGATCCATCCACATCTTCCAAAGCTCAAGAAGAAACACCTTGCAGTTCTGACAAGAAACCACAAAACTCATCTGATATCAATGGTAATGGTAAAATAGTTTTGAACGAGGAACATGTCGACGAGCCAGATCCAAAACGAAGGCAAGTCCGCGTATGAAATCATATTATTTATCAGCAAAGCTTAAACAATAAGCCCATTTATTTTAATTGTGGCAGGATATAATGATTTATGTTCTCTCATTTAATTTGATAACCAGAAAGGAGAAAGGTGACTTGGTTCACTCAGATTCTTCTGTAAAACCTGAAAAGAAACCCAAGTTTGTTGTACATGCAGCAGGAGATGTGGGGATATCTGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGTAACCCACATCCCAGGTAAAGGTCTTTATCCACAAGCCAAGTATGCATAATTTCTGTTTCCTTTGGTTATTATTTATTTTGTTCTTGATATGAATCGAATTTGTTGCATTGATGAATCAGTATCTTTAGTTGAATATTATGAAAGTTGAGTTTAGGTGTAAACAGTGTTCAATTTTTTAAAATAAATAAAAAATATAAAGTCCAATAAAAAAGTTGCAAGCTGCATTTATTTATTGTAAGCAGTTTGAAAAATGACAAGGCCAAGATCTTATTCAAGCTGGTGCCTTTTTTGCTTTCTTTTCTACTTAAGTGACTTTTTAAAATATTGTTCATAAATTTATATGGATGGATATTCACTTACATTGAGAGTAATTTTTGTCACAATTAAATTAAATTTTATCAATTAAGTTGCTGAATATTGTCATATTATCTTAGGGATTATGCACACCAAATTCTAGATAAATTTGACTTGTGTAGTTATTTTATAGTTGACATTTATTTTTATTTCACAAATATATCATGCCTTAAGTTTAATTTATTTGATTAAGTATCAAATATCTTTTGAATTTTATGAAATTTGTAAACTAGATAAATGAAGCTTGCAACTTTTTATTTTTGAAGGCACTTGTATTTTGTGCATGTTTATATTTGGCTTATTTTATGCTTAGAATGTGTCTAAAATAGAGATGTTGCTAAGAGAGCTATATCTATAAAGCTGTTATTTTTTTAAAGTTAAGCTAAAACACATATGGACAGAGTGTTAAATTAATACATGAAAGGTTTAGACAAATTACTATAGCCTATAGGTCAGCTTATGAAACAAGAGGCTAAGATAAGTTGGTAAATATTATGTTTAACTTAGACCAATAAGTGGCGGAGCATGGATGATAGTATATAAATGTTAAGGAATATATAAATGTAAGTATATTGGACAAATAATGTGTAATTTGTATCGTGGTGTTAATTAATGAAAAGTTTTAGATAAATTACTATAGCCTATTGGTTAAATTGTGAAACAAGAGGCCTAGGTAAGTTGGTAAATATTGTGTTAAACTGAGACCAGTAGAGGGGGTCAATTTTTTATGGAATATACATGTAAATATGTCACACAAATAACGTGTAGCTTGTATCGTGGTATAGTGGTTTAATCCACTTGTTTCTTACTTTGAAATACGGGGTTCGAATCTTGGGCCTACCATTGGTATAGTGGTTTAATCCACATGTTTCTTACTTTGAATTCCGGGGTTCCAATCTTGGGCCTACCATGTTTCCTCAAGAAAATACACTGGAAAGGCAAAAATGCGCTTAAAAGGAATCGACTCCAAGTCCCCGTCCTCCTTGCAAAACTAGCTTAGCAACTAGACTACCGTAAACTTCTATGAATGTAACCATATGATGTGTTGATGTTAGACATTCGCACATGCTGAACATCGGACACATCCACATCCTTAATTCGAGGCGTCGGTGCTACATGGATAGAATAAAAAACTTGGGGGAGCCGTGACTTCCATCTGTACCTCAAAAGATCCGTTACTGACCACCGAAACATGTCTGTTTCCATCCCTTGTTCTACAAAATGTATCTATCCATCATGGTAGTATTATGTATCCATGGAAACAGAACTGTATCTTCAAGAAAATGTATCGGACAAAATTATTTGCCAAACTGATTTTTCGGCTTTTTTTTCTTCCTGTTTATATGAATGATATTAAAGCTCACTTTTTTCCTTTTACGGATTGTTGGTTTTCTTTTTAAGTTTTCTTTAATTTTCCATTGAATTTTTTTCCTTTTCTTATCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTTCGAAAGCACATTGAGACTGCCGTAGACAACTCAGATGCTGTCATCATAACTTACAAGGGTGTACATGATCATGACACTCCTGTGCCGAAGAAACGACACGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAATAATTTGCTGTGCCCACCAAGTGCTCCTCTTGTGGCTGATGCAGCACCTGCCTCCATGAATAATTTGCAGTTGAGTAAACCGGACTCGCCACAAAATCAGAAAATTTCTACTCAATGGTCAGTGGACACCGAAGGAGAACTAACCGGGGAAGCCAAGGACCTTGGGGGTGAGAAAGCAATAGAGTCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATCAAGCCTTGCTGA
Protein sequence

>MS.gene001561.t1

MAEHRVSEALPVGPTQLLPEQQKAQEIKKEPVGESPSATESQKSELPSSNENSNSETLIAFPSLVLDQRSFDVQGIPNTLNSVVKSEIKETVGPLENEKEVAKREAVQEPSAQAEEQLQVTVSSNPPSELSPNSVTKSLSSVPSPTIQIQNMSPPIVSNTPVAEVNKKSTSGGRALSSVSVPRTPSSDGFNWRKYGQKQVKSPTTGSRSYYRCTQSNCCAKKIECWDHSGHVIETVYKSEHSHDPPRKISSIRESKFAPSNEPTAENSVLVKPVNAPKDSDPSTSSKAQEETPCSSDKKPQNSSDINGNGKIVLNEEHVDEPDPKRRKEKGDLVHSDSSVKPEKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPASMNNLLCPPSAPLVADAAPASMNNLQLSKPDSPQNQKISTQWSVDTEGELTGEAKDLGGEKAIESARTLLSIGFEIKPC