AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene001907

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001907.t1 MTR_7g027190 98.373 676 9 1 1 676 1 674 0.0 1381
MS.gene001907.t1 MTR_4g104020 41.604 399 211 6 290 676 133 521 2.20e-96 307
MS.gene001907.t1 MTR_3g065980 35.810 525 269 13 186 676 51 541 1.17e-92 298
MS.gene001907.t1 MTR_7g074650 41.910 377 186 6 306 675 442 792 2.32e-92 304
MS.gene001907.t1 MTR_8g442410 40.863 394 206 6 294 675 147 525 2.54e-88 286
MS.gene001907.t1 MTR_5g097480 40.204 393 205 5 295 675 170 544 5.91e-88 285
MS.gene001907.t1 MTR_4g102790 38.303 389 217 7 296 674 286 661 7.10e-82 273
MS.gene001907.t1 MTR_1g029420 39.589 389 201 6 301 675 224 592 9.82e-81 268
MS.gene001907.t1 MTR_2g082090 36.490 433 239 5 260 674 164 578 7.22e-79 262
MS.gene001907.t1 MTR_3g056110 32.734 556 296 10 164 675 21 542 5.33e-78 259
MS.gene001907.t1 MTR_5g094450 33.406 461 267 7 235 675 92 532 1.18e-77 258
MS.gene001907.t1 MTR_3g089055 37.887 388 209 5 301 675 202 570 3.73e-76 255
MS.gene001907.t1 MTR_3g089055 37.887 388 209 5 301 675 197 565 4.30e-76 254
MS.gene001907.t1 MTR_4g076020 39.037 374 192 11 306 675 88 429 3.42e-71 238
MS.gene001907.t1 MTR_4g133660 35.878 393 221 5 297 676 170 544 4.69e-71 241
MS.gene001907.t1 MTR_2g026250 33.666 401 219 8 297 676 223 597 7.58e-69 236
MS.gene001907.t1 MTR_4g064160 34.000 400 234 6 288 674 301 683 4.17e-65 228
MS.gene001907.t1 MTR_1g069725 35.128 390 224 10 292 676 99 464 7.55e-65 222
MS.gene001907.t1 MTR_5g058860 36.930 417 210 17 290 676 105 498 2.31e-64 221
MS.gene001907.t1 MTR_1g096030 34.140 413 220 14 292 675 70 459 9.00e-64 219
MS.gene001907.t1 MTR_3g072710 37.101 407 219 14 292 676 110 501 2.60e-63 219
MS.gene001907.t1 MTR_3g022830 30.140 428 227 5 303 675 26 436 1.15e-61 212
MS.gene001907.t1 MTR_7g062120 32.398 392 234 5 297 675 367 740 5.64e-59 212
MS.gene001907.t1 MTR_4g064120 31.910 398 234 5 293 672 245 623 1.20e-58 209
MS.gene001907.t1 MTR_4g064180 31.910 398 234 5 293 672 245 623 1.68e-57 206
MS.gene001907.t1 MTR_2g097410 31.807 393 237 6 296 674 365 740 1.24e-56 205
MS.gene001907.t1 MTR_4g064200 31.714 391 234 7 297 674 279 649 2.13e-56 203
MS.gene001907.t1 MTR_2g097310 30.848 389 240 6 297 674 267 637 2.74e-56 202
MS.gene001907.t1 MTR_4g064150 31.671 401 237 7 292 674 351 732 2.58e-55 201
MS.gene001907.t1 MTR_2g097390 30.334 389 242 6 297 674 270 640 1.34e-54 198
MS.gene001907.t1 MTR_2g097467 29.771 393 242 5 295 674 282 653 4.21e-54 197
MS.gene001907.t1 MTR_4g097080 30.412 388 241 9 301 675 132 503 4.74e-53 191
MS.gene001907.t1 MTR_2g097350 29.820 389 244 6 297 674 269 639 1.43e-52 192
MS.gene001907.t1 MTR_2g097473 30.227 397 235 8 295 674 282 653 2.07e-51 189
MS.gene001907.t1 MTR_4g077760 33.962 371 208 8 318 675 209 555 1.49e-50 185
MS.gene001907.t1 MTR_2g097463 27.949 390 249 5 297 674 285 654 9.95e-50 184
MS.gene001907.t1 MTR_2g034250 31.514 403 248 9 288 675 196 585 8.67e-49 181
MS.gene001907.t1 MTR_5g015490 30.923 401 240 11 295 675 107 490 9.55e-48 176
MS.gene001907.t1 MTR_2g097380 29.235 366 205 6 318 674 240 560 3.83e-47 176
MS.gene001907.t1 MTR_2g034280 29.703 404 251 11 288 675 189 575 2.54e-46 173
MS.gene001907.t1 MTR_2g034260 30.296 406 248 11 288 675 196 584 4.19e-46 173
MS.gene001907.t1 MTR_7g109580 29.723 397 253 9 288 675 175 554 4.28e-44 167
MS.gene001907.t1 MTR_2g089100 28.431 408 240 10 302 674 52 442 1.43e-43 163
MS.gene001907.t1 MTR_8g093070 32.426 404 221 15 289 674 126 495 6.14e-42 159
MS.gene001907.t1 MTR_1g086970 28.571 406 265 11 285 675 83 478 3.06e-41 157
MS.gene001907.t1 MTR_5g009080 36.797 231 124 2 291 518 45 256 9.67e-40 153
MS.gene001907.t1 MTR_5g009080 43.624 149 84 0 527 675 330 478 7.25e-39 150
MS.gene001907.t1 MTR_4g076140 44.595 148 82 0 528 675 322 469 2.30e-39 151
MS.gene001907.t1 MTR_4g076140 35.088 228 132 2 291 518 37 248 1.36e-34 137
MS.gene001907.t1 MTR_7g057230 34.007 297 175 8 394 674 365 656 1.79e-38 152
MS.gene001907.t1 MTR_0092s0100 29.124 388 238 11 299 676 372 732 2.11e-35 143
MS.gene001907.t1 MTR_0092s0100 29.124 388 238 11 299 676 369 729 2.45e-35 143
MS.gene001907.t1 MTR_6g047750 29.383 405 216 13 303 675 296 662 5.78e-34 138
MS.gene001907.t1 MTR_2g099110 26.329 395 253 10 302 675 74 451 8.84e-33 132
MS.gene001907.t1 MTR_4g095500 25.714 420 254 9 302 674 59 467 2.01e-32 131
MS.gene001907.t1 MTR_4g026485 28.238 386 235 12 303 676 270 625 1.18e-31 131
MS.gene001907.t1 MTR_5g015950 25.592 422 254 12 302 674 35 445 4.21e-31 127
MS.gene001907.t1 MTR_3g053270 25.592 422 254 12 302 674 35 445 4.21e-31 127
MS.gene001907.t1 MTR_8g077940 27.226 393 242 14 299 676 179 542 1.05e-28 121
MS.gene001907.t1 MTR_3g022580 41.441 111 64 1 565 675 74 183 2.36e-22 95.5
MS.gene001907.t1 MTR_3g022005 41.176 102 59 1 574 675 25 125 9.73e-20 85.9
MS.gene001907.t1 MTR_8g020840 23.645 406 250 12 302 675 171 548 1.15e-19 93.6
MS.gene001907.t1 MTR_1g106590 30.714 140 75 2 293 429 121 241 1.24e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001907.t1 AT1G66350 44.103 390 184 11 293 676 146 507 1.31e-97 310
MS.gene001907.t1 AT3G03450 42.092 392 198 8 293 675 174 545 3.98e-95 304
MS.gene001907.t1 AT3G54220 41.709 398 196 6 287 674 278 649 1.09e-92 301
MS.gene001907.t1 AT1G14920 40.712 393 197 9 293 675 163 529 3.89e-90 291
MS.gene001907.t1 AT5G17490 42.967 391 190 10 293 675 151 516 2.23e-89 288
MS.gene001907.t1 AT2G01570 40.458 393 198 10 293 675 215 581 3.45e-87 285
MS.gene001907.t1 AT5G41920 40.759 395 202 9 289 675 30 400 1.96e-86 277
MS.gene001907.t1 AT2G04890 39.949 393 209 5 289 675 42 413 6.84e-84 271
MS.gene001907.t1 AT5G48150 39.481 385 204 5 303 675 123 490 5.82e-83 271
MS.gene001907.t1 AT5G48150 39.481 385 204 5 303 675 123 490 5.82e-83 271
MS.gene001907.t1 AT5G48150 39.481 385 204 5 303 675 123 490 5.82e-83 271
MS.gene001907.t1 AT5G48150 39.481 385 204 5 303 675 123 490 5.82e-83 271
MS.gene001907.t1 AT1G50600 38.560 389 209 6 299 675 156 526 1.99e-73 246
MS.gene001907.t1 AT1G50600 39.075 389 207 7 299 675 227 597 5.50e-73 247
MS.gene001907.t1 AT1G50600 39.075 389 207 7 299 675 231 601 7.85e-73 247
MS.gene001907.t1 AT1G21450 36.434 387 217 4 301 675 224 593 2.77e-72 245
MS.gene001907.t1 AT1G55580 37.438 406 226 8 298 675 40 445 1.48e-71 239
MS.gene001907.t1 AT4G17230 36.061 391 220 4 297 675 153 525 5.15e-68 232
MS.gene001907.t1 AT4G17230 36.061 391 220 4 297 675 153 525 5.15e-68 232
MS.gene001907.t1 AT1G63100 34.596 396 227 7 297 674 247 628 4.06e-67 232
MS.gene001907.t1 AT1G63100 34.596 396 227 7 297 674 272 653 7.16e-67 232
MS.gene001907.t1 AT1G07520 31.762 403 245 8 288 674 140 528 6.25e-59 207
MS.gene001907.t1 AT1G07520 31.762 403 245 8 288 674 140 528 6.25e-59 207
MS.gene001907.t1 AT1G07520 31.592 402 247 7 288 674 305 693 2.24e-58 209
MS.gene001907.t1 AT1G07520 31.592 402 247 7 288 674 304 692 2.29e-58 209
MS.gene001907.t1 AT3G46600 30.326 399 246 5 290 675 200 579 3.59e-57 204
MS.gene001907.t1 AT5G59450 29.442 394 246 6 297 675 222 598 4.70e-57 204
MS.gene001907.t1 AT3G46600 30.326 399 246 5 290 675 168 547 8.43e-57 202
MS.gene001907.t1 AT3G46600 30.670 388 237 5 301 675 3 371 3.86e-56 196
MS.gene001907.t1 AT1G07530 31.538 390 235 6 299 674 393 764 2.79e-55 202
MS.gene001907.t1 AT2G29065 29.820 389 244 7 302 674 252 627 1.14e-54 198
MS.gene001907.t1 AT5G66770 35.038 391 217 10 299 675 217 584 1.51e-53 194
MS.gene001907.t1 AT2G29060 30.612 392 238 7 299 674 281 654 8.12e-53 193
MS.gene001907.t1 AT2G29060 30.612 392 238 7 299 674 318 691 1.22e-52 193
MS.gene001907.t1 AT2G37650 30.827 399 229 7 297 675 330 701 1.54e-52 193
MS.gene001907.t1 AT2G37650 31.078 399 228 8 297 675 342 713 1.92e-52 193
MS.gene001907.t1 AT4G08250 32.432 407 228 14 290 674 95 476 3.86e-49 179
MS.gene001907.t1 AT3G50650 33.962 371 205 9 322 675 195 542 5.98e-46 172
MS.gene001907.t1 AT4G37650 29.397 398 243 10 302 675 146 529 2.76e-43 164
MS.gene001907.t1 AT5G52510 30.250 400 224 9 303 675 269 640 6.38e-40 156
MS.gene001907.t1 AT1G50420 45.333 150 82 0 527 676 331 480 6.61e-39 150
MS.gene001907.t1 AT1G50420 38.496 226 125 2 293 518 48 259 5.91e-38 147
MS.gene001907.t1 AT3G49950 28.678 401 237 10 301 674 29 407 5.90e-33 132
MS.gene001907.t1 AT2G45160 27.829 327 204 9 369 676 327 640 2.02e-28 121
MS.gene001907.t1 AT4G00150 27.431 401 238 13 284 676 200 555 2.75e-28 120
MS.gene001907.t1 AT4G36710 26.884 398 256 11 289 675 112 485 5.47e-28 118
MS.gene001907.t1 AT3G60630 28.852 305 191 10 390 676 327 623 1.04e-27 119
MS.gene001907.t1 AT3G13840 24.557 395 245 14 302 675 148 510 1.78e-14 77.0

Find 162 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCCAATATCAACAATTT+TGG 0.134391 7.3:+72995373 MS.gene001907:CDS
TGTTGCATATATTGATTATT+TGG 0.203768 7.3:-72995242 None:intergenic
GTAGAAGCTTGTGGTGAATT+AGG 0.209436 7.3:-72995062 None:intergenic
TGTATTCATGTGATGGTTAT+AGG 0.213345 7.3:+72997164 MS.gene001907:CDS
CTATCCAAAATTGTTGATAT+TGG 0.238972 7.3:-72995377 None:intergenic
AATAGTAATAATCAACAAAA+AGG 0.242712 7.3:+72995182 MS.gene001907:CDS
GGCAAGCTTGGTAGACAATT+TGG 0.255349 7.3:-72996412 None:intergenic
TGCCTCAAACGCCTCGAAAA+TGG 0.275785 7.3:-72996471 None:intergenic
GACTCAGTCGAGGATATTAT+TGG 0.282626 7.3:+72997138 MS.gene001907:CDS
GATGGTAAGTTTAGGCTTTG+TGG 0.292426 7.3:-72994909 None:intergenic
GTTAGGGTTAATGTTTCTAA+TGG 0.293041 7.3:-72995039 None:intergenic
TAGAAGCTTGTGGTGAATTA+GGG 0.297220 7.3:-72995061 None:intergenic
GACATGAGAGGTTGGAGAAA+TGG 0.307042 7.3:+72997059 MS.gene001907:CDS
GTATCATCAAATGGGATCTA+TGG 0.314373 7.3:+72995505 MS.gene001907:CDS
TCATGAAATCATTATCTAAA+TGG 0.317694 7.3:-72995007 None:intergenic
TCTCTCAAATTTGACTTAGA+TGG 0.323118 7.3:+72994930 MS.gene001907:CDS
AACCGTCTCCACCGTGTTCC+TGG 0.336032 7.3:+72996776 MS.gene001907:CDS
TTGATGATGACTTGGTTGTT+AGG 0.342078 7.3:-72996295 None:intergenic
ATTTGTTTGATTTGAAGAAT+TGG 0.347254 7.3:-72994823 None:intergenic
GGTCTCTTATCATGGATAAC+AGG 0.350431 7.3:-72996814 None:intergenic
GAGCAAGAAGCAAGCCATAA+TGG 0.356142 7.3:+72996863 MS.gene001907:CDS
TCTAAGAACTCTTCAATTGC+TGG 0.367894 7.3:-72995284 None:intergenic
TCCTCAAGTTGTTCTCCAAC+AGG 0.371000 7.3:-72996695 None:intergenic
CCGCCGTGTAGGCGAGGCTT+TGG 0.375077 7.3:+72996739 MS.gene001907:CDS
TGGTGCTTGGTCTCTTATCA+TGG 0.378979 7.3:-72996822 None:intergenic
GCTTGTGGTGAATTAGGGTT+AGG 0.379242 7.3:-72995056 None:intergenic
TATAGGTTAACTGAGGATAA+AGG 0.379685 7.3:+72997181 MS.gene001907:CDS
ATAAAGGTTGTTTGTTGCTT+GGG 0.381702 7.3:+72997197 MS.gene001907:CDS
CTAACAGTTCCTATTCCAAT+TGG 0.386725 7.3:+72995608 MS.gene001907:CDS
GATAAAGGTTGTTTGTTGCT+TGG 0.388205 7.3:+72997196 MS.gene001907:CDS
CCATGCAGAAGCAGCGATAA+TGG 0.390323 7.3:-72997233 None:intergenic
GCTTCCCACATTGAACTATC+TGG 0.392042 7.3:-72994972 None:intergenic
CCGGCGGTGCTCCGTTCCTT+AGG 0.397678 7.3:+72996576 MS.gene001907:CDS
AGGACTTCCATAGGGTTTGA+TGG 0.398057 7.3:-72996380 None:intergenic
CACAAGCTTTACAGCAAGAA+AGG 0.398985 7.3:+72995543 MS.gene001907:CDS
AATGCAAAGCCTCGAGAAAT+CGG 0.401833 7.3:-72996901 None:intergenic
GCCAATGCCTGCATGAATGC+AGG 0.402364 7.3:-72996545 None:intergenic
ATGCAAATTCAAAGCCTATC+AGG 0.406320 7.3:+72995119 MS.gene001907:CDS
CAGGCCATTGGTAGCCTTGA+AGG 0.407502 7.3:-72996526 None:intergenic
CAGGCATTGGCTGCACGGCC+CGG 0.413918 7.3:+72996557 MS.gene001907:CDS
GTCACTGCATTAGGACTTAG+AGG 0.414350 7.3:-72997118 None:intergenic
ACTCAGTCGAGGATATTATT+GGG 0.417000 7.3:+72997139 MS.gene001907:CDS
ATTTGAGAGATGGTAAGTTT+AGG 0.417615 7.3:-72994917 None:intergenic
TGATGATGACTTGGTTGTTA+GGG 0.418899 7.3:-72996294 None:intergenic
TTTGTTTGATTTGAAGAATT+GGG 0.419908 7.3:-72994822 None:intergenic
TTAGGGTTAATGTTTCTAAT+GGG 0.423047 7.3:-72995038 None:intergenic
ATCGACCTTGATATCCTTCA+AGG 0.423493 7.3:+72996512 MS.gene001907:CDS
CTCGACTGAGTCACTGCATT+AGG 0.425244 7.3:-72997127 None:intergenic
GAGTGATATGTATCATCAAA+TGG 0.430639 7.3:+72995496 MS.gene001907:CDS
TCCACAAGTGTCACTATGTT+TGG 0.431028 7.3:-72996842 None:intergenic
ATATATTTGCACCGGAGATT+CGG 0.433485 7.3:+72996999 MS.gene001907:CDS
CCTAAGGAACGGAGCACCGC+CGG 0.433800 7.3:-72996576 None:intergenic
TCCTTAGGATCACTGGAGTT+GGG 0.435193 7.3:+72996591 MS.gene001907:CDS
CTCGAAAATGGCTTGGTTAG+CGG 0.435294 7.3:-72996459 None:intergenic
ATCGAATCGGTTAGGGAAAC+CGG 0.437086 7.3:+72996620 MS.gene001907:CDS
TCATGCAGGCATTGGCTGCA+CGG 0.438295 7.3:+72996552 MS.gene001907:CDS
GGCCGTGCATCGAATCGGTT+AGG 0.440216 7.3:+72996612 MS.gene001907:CDS
GGAGAAATGGAGGAAGATAA+TGG 0.442415 7.3:+72997072 MS.gene001907:CDS
AAAATGATGAATTCACTTTG+TGG 0.443783 7.3:+72994765 None:intergenic
ATTACCTGCTCAATTCCAAT+TGG 0.449064 7.3:-72995623 None:intergenic
TTCCTTAGGATCACTGGAGT+TGG 0.451123 7.3:+72996590 MS.gene001907:CDS
AGCAAGAAGCAAGCCATAAT+GGG 0.452508 7.3:+72996864 MS.gene001907:CDS
GTGTTCCTGGCAATCATCTC+GGG 0.453444 7.3:+72996789 MS.gene001907:CDS
GATAGAGAGACATGAGAGGT+TGG 0.454325 7.3:+72997051 MS.gene001907:CDS
CAAAATTCTTCAAGCTATTG+TGG 0.454394 7.3:+72995410 MS.gene001907:CDS
TAAATCACTACAAGAATTTG+TGG 0.454463 7.3:-72994865 None:intergenic
TGCTCAATTCCAATTGGAAT+AGG 0.456239 7.3:-72995617 None:intergenic
GCCACGATGTTCCGAATCTC+CGG 0.464344 7.3:-72997010 None:intergenic
CCGTGTAGGCGAGGCTTTGG+CGG 0.466492 7.3:+72996742 MS.gene001907:CDS
CGTGTTCCTGGCAATCATCT+CGG 0.467483 7.3:+72996788 MS.gene001907:CDS
ACATTGAACTATCTGGTGAT+TGG 0.469373 7.3:-72994965 None:intergenic
TACTGCTCCACCTTAGCCCT+TGG 0.470876 7.3:-72996977 None:intergenic
AGGAAGATAATGGAAGGAAA+AGG 0.470928 7.3:+72997082 MS.gene001907:CDS
CTTGTGGTGAATTAGGGTTA+GGG 0.477041 7.3:-72995055 None:intergenic
ATGAGAGGTTGGAGAAATGG+AGG 0.478165 7.3:+72997062 MS.gene001907:CDS
TGTGCTGAAGCAGTGGCAAA+AGG 0.478803 7.3:+72996149 MS.gene001907:CDS
AACACGGTGGAGACGGTTAA+CGG 0.479130 7.3:-72996771 None:intergenic
GCTCCGTTCCTTAGGATCAC+TGG 0.483442 7.3:+72996584 MS.gene001907:CDS
TATTCCAATTGGAATTGAGC+AGG 0.485481 7.3:+72995619 MS.gene001907:CDS
TTCCATAGGGTTTGATGGGA+AGG 0.488537 7.3:-72996375 None:intergenic
GCCTGCATTCATGCAGGCAT+TGG 0.492416 7.3:+72996544 MS.gene001907:CDS
TCCCTAACCGATTCGATGCA+CGG 0.492832 7.3:-72996614 None:intergenic
GGAAGATAATGGAAGGAAAA+GGG 0.495224 7.3:+72997083 MS.gene001907:CDS
CCCTTCGAGTTCCACCCTGT+TGG 0.500773 7.3:+72996680 MS.gene001907:CDS
GTGTCACTATGTTTGGTGCT+TGG 0.501545 7.3:-72996835 None:intergenic
CCGCCAAAGCCTCGCCTACA+CGG 0.501971 7.3:-72996742 None:intergenic
TAACTCTGTTAAGCATCGTC+CGG 0.502256 7.3:-72996639 None:intergenic
GTGCTGAAGCAGTGGCAAAA+GGG 0.503557 7.3:+72996150 MS.gene001907:CDS
AGTGATATGTATCATCAAAT+GGG 0.505152 7.3:+72995497 MS.gene001907:CDS
TACCTTCCCATCAAACCCTA+TGG 0.506323 7.3:+72996373 MS.gene001907:CDS
TCCTGTGGAGTCAGCACCAA+GGG 0.507337 7.3:+72996961 MS.gene001907:CDS
AGTTGGGCCGTGCATCGAAT+CGG 0.524300 7.3:+72996607 MS.gene001907:CDS
GCCCTTGGTGCTGACTCCAC+AGG 0.524463 7.3:-72996962 None:intergenic
GCATTGGCTGCACGGCCCGG+CGG 0.530002 7.3:+72996560 MS.gene001907:CDS
CCAATGGCCTGCATTCATGC+AGG 0.532300 7.3:+72996538 MS.gene001907:CDS
TAGATCTTGAGGACTTCCAT+AGG 0.534706 7.3:-72996389 None:intergenic
TGCCAGGAACACGGTGGAGA+CGG 0.538538 7.3:-72996778 None:intergenic
AGAATCTCTAAGTGCAAGAC+TGG 0.538771 7.3:+72996265 MS.gene001907:CDS
GGTAGATAAACATGATGAAG+AGG 0.540118 7.3:-72996354 None:intergenic
GGACTTCCATAGGGTTTGAT+GGG 0.540263 7.3:-72996379 None:intergenic
TTGGGTTTGTATTCATGTGA+TGG 0.544918 7.3:+72997157 MS.gene001907:CDS
CGGAACATCGTGGCATGTGA+AGG 0.545048 7.3:+72997019 MS.gene001907:CDS
AGACAATTTGGTAGATCTTG+AGG 0.549770 7.3:-72996400 None:intergenic
AAGGTTGTTTGTTGCTTGGG+TGG 0.550029 7.3:+72997200 MS.gene001907:CDS
AGATCTTGAGGACTTCCATA+GGG 0.551151 7.3:-72996388 None:intergenic
CTAAGGAACGGAGCACCGCC+GGG 0.552205 7.3:-72996575 None:intergenic
CAAACGCCTCGAAAATGGCT+TGG 0.554574 7.3:-72996466 None:intergenic
GGAGTCAGCACCAAGGGCTA+AGG 0.554647 7.3:+72996967 MS.gene001907:CDS
CACAGGAAAAGTAGCGTCCA+AGG 0.554855 7.3:-72996945 None:intergenic
TCTAAGTCAAATTTGAGAGA+TGG 0.557349 7.3:-72994927 None:intergenic
ATGGAAGGAAAAGGGTTCAA+AGG 0.557828 7.3:+72997091 MS.gene001907:CDS
GCCCAACTCCAGTGATCCTA+AGG 0.558573 7.3:-72996592 None:intergenic
TGTAACTATAACTATGCTCA+AGG 0.559054 7.3:+72995095 MS.gene001907:CDS
GTCAGCACCAAGGGCTAAGG+TGG 0.559830 7.3:+72996970 MS.gene001907:CDS
GGTAGCCTTGAAGGATATCA+AGG 0.560859 7.3:-72996517 None:intergenic
TGCTGAAGCAGTGGCAAAAG+GGG 0.561256 7.3:+72996151 MS.gene001907:CDS
GGATATCAAGGTCGATGACA+TGG 0.564199 7.3:-72996505 None:intergenic
AGGTTCCCGAGATGATTGCC+AGG 0.564807 7.3:-72996794 None:intergenic
GCCGTGCATCGAATCGGTTA+GGG 0.568254 7.3:+72996613 MS.gene001907:CDS
CCAACAGGGTGGAACTCGAA+GGG 0.569813 7.3:-72996680 None:intergenic
GAGGTGGTGAACAACCTGAT+AGG 0.574741 7.3:-72995133 None:intergenic
CCATTATCGCTGCTTCTGCA+TGG 0.581952 7.3:+72997233 MS.gene001907:CDS
ACATGAAGCTACTCTTTGCA+TGG 0.581987 7.3:-72996237 None:intergenic
CCTGCATGAATGCAGGCCAT+TGG 0.587372 7.3:-72996538 None:intergenic
GTTTAACCGCCGTGTAGGCG+AGG 0.587763 7.3:+72996733 MS.gene001907:CDS
GTGTTACTACTCTATTGAGC+TGG 0.588376 7.3:-72996202 None:intergenic
GGGAATACATGCTAGCAAGA+AGG 0.591113 7.3:+72996171 MS.gene001907:CDS
TCCAACAGGGTGGAACTCGA+AGG 0.593188 7.3:-72996681 None:intergenic
GATGATGATGATAACGATGA+TGG 0.595521 7.3:-72996332 None:intergenic
CTACTCTATTGAGCTGGTGT+AGG 0.595572 7.3:-72996196 None:intergenic
GAATTAAATACTCTATGAAG+TGG 0.597232 7.3:-72995218 None:intergenic
CCCTGTTGGAGAACAACTTG+AGG 0.601784 7.3:+72996694 MS.gene001907:CDS
CGAGATGATTGCCAGGAACA+CGG 0.603757 7.3:-72996787 None:intergenic
ATCACCAGATAGTTCAATGT+GGG 0.605621 7.3:+72994968 MS.gene001907:CDS
ATATCCTTCAAGGCTACCAA+TGG 0.609017 7.3:+72996522 MS.gene001907:CDS
AGAGGATAGAGAGACATGAG+AGG 0.611332 7.3:+72997047 MS.gene001907:CDS
CATCGTGGCATGTGAAGGTG+AGG 0.614548 7.3:+72997024 MS.gene001907:CDS
AAATGGAGGAAGATAATGGA+AGG 0.614581 7.3:+72997076 MS.gene001907:CDS
CTTTGCATGGAGTCACCTAG+TGG 0.624018 7.3:-72996224 None:intergenic
GGAGCAGTATATATTTGCAC+CGG 0.624565 7.3:+72996991 MS.gene001907:CDS
TCTAGCATGTGCTGAAGCAG+TGG 0.626696 7.3:+72996142 MS.gene001907:CDS
TTCCTGTGGAGTCAGCACCA+AGG 0.627178 7.3:+72996960 MS.gene001907:CDS
ATTTGACTTAGATGGTGATG+TGG 0.646549 7.3:+72994938 MS.gene001907:CDS
AATAGAGTAGTAACACCACT+AGG 0.648126 7.3:+72996209 MS.gene001907:CDS
CCTCAAGTTGTTCTCCAACA+GGG 0.648235 7.3:-72996694 None:intergenic
CACATGTTTAACCGCCGTGT+AGG 0.660169 7.3:+72996728 MS.gene001907:CDS
TATATGTAGGAGCAAGACAG+TGG 0.662868 7.3:+72996098 MS.gene001907:intron
CTAATGCAGTGACTCAGTCG+AGG 0.665092 7.3:+72997128 MS.gene001907:CDS
ACTCCAGTGATCCTAAGGAA+CGG 0.672214 7.3:-72996587 None:intergenic
CAACAGGGTGGAACTCGAAG+GGG 0.673995 7.3:-72996679 None:intergenic
ACACGGCGGTTAAACATGTG+CGG 0.674730 7.3:-72996725 None:intergenic
TGGCATGTGAAGGTGAGGAG+AGG 0.683443 7.3:+72997029 MS.gene001907:CDS
ACCAAACATAGTGACACTTG+TGG 0.687522 7.3:+72996841 MS.gene001907:CDS
TTATTGTAAGTAGAAGCTTG+TGG 0.706364 7.3:-72995071 None:intergenic
CCAATTTGTGATGCAAAACG+AGG 0.711917 7.3:-72995152 None:intergenic
TGATGGTTATAGGTTAACTG+AGG 0.712462 7.3:+72997174 MS.gene001907:CDS
AATCACCAGATAGTTCAATG+TGG 0.716750 7.3:+72994967 MS.gene001907:CDS
CAAGTTGTTCTCCAACAGGG+TGG 0.720607 7.3:-72996691 None:intergenic
ATTTGTGATGCAAAACGAGG+TGG 0.735195 7.3:-72995149 None:intergenic
ACCGGAGATTCGGAACATCG+TGG 0.740006 7.3:+72997009 MS.gene001907:CDS
GATGATTGCCAGGAACACGG+TGG 0.742020 7.3:-72996784 None:intergenic
CCAAAGCCTCGCCTACACGG+CGG 0.759718 7.3:-72996739 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAGTATTAAATAATTAATA+CGG - chr7.3:72995978-72995997 None:intergenic 10.0%
!!! ATTGAATTAATTAAGATTTT+AGG - chr7.3:72995674-72995693 None:intergenic 10.0%
!!! TTAGAAAAATTGATAATAAA+TGG - chr7.3:72995757-72995776 None:intergenic 10.0%
!! AATAGTAATAATCAACAAAA+AGG + chr7.3:72995182-72995201 MS.gene001907:CDS 15.0%
!! ATAGTAATAATCAACAAAAA+GGG + chr7.3:72995183-72995202 MS.gene001907:CDS 15.0%
!! TATGTTAATTTATTCAGTTA+GGG - chr7.3:72995718-72995737 None:intergenic 15.0%
!! TTAAATAATTAATACGGAAA+TGG - chr7.3:72995972-72995991 None:intergenic 15.0%
!! TTATGTTAATTTATTCAGTT+AGG - chr7.3:72995719-72995738 None:intergenic 15.0%
!! GCTATATATCTAATATATGT+AGG + chr7.3:72996085-72996104 MS.gene001907:intron 20.0%
!! TCATGAAATCATTATCTAAA+TGG - chr7.3:72995010-72995029 None:intergenic 20.0%
!!! ATTTGTTTGATTTGAAGAAT+TGG - chr7.3:72994826-72994845 None:intergenic 20.0%
!!! TCAATTTTTCTAATTCAACT+TGG + chr7.3:72995764-72995783 MS.gene001907:intron 20.0%
!!! TGTTGCATATATTGATTATT+TGG - chr7.3:72995245-72995264 None:intergenic 20.0%
!!! TTTGTTTGATTTGAAGAATT+GGG - chr7.3:72994825-72994844 None:intergenic 20.0%
! AATAATCAACAAAAAGGGAA+AGG + chr7.3:72995188-72995207 MS.gene001907:CDS 25.0%
! AGTGATATGTATCATCAAAT+GGG + chr7.3:72995497-72995516 MS.gene001907:CDS 25.0%
! ATAATTAATACGGAAATGGA+AGG - chr7.3:72995968-72995987 None:intergenic 25.0%
! CTATCCAAAATTGTTGATAT+TGG - chr7.3:72995380-72995399 None:intergenic 25.0%
! GAATTAAATACTCTATGAAG+TGG - chr7.3:72995221-72995240 None:intergenic 25.0%
! TAAATCACTACAAGAATTTG+TGG - chr7.3:72994868-72994887 None:intergenic 25.0%
! TTAATTTATTCAGTTAGGGA+GGG - chr7.3:72995714-72995733 None:intergenic 25.0%
!! AACTCCAATATCAACAATTT+TGG + chr7.3:72995373-72995392 MS.gene001907:CDS 25.0%
!! AAGTGTGCAAATTTTATGTA+AGG - chr7.3:72996437-72996456 None:intergenic 25.0%
!! AGTGTGCAAATTTTATGTAA+GGG - chr7.3:72996436-72996455 None:intergenic 25.0%
!! TTAGGGTTAATGTTTCTAAT+GGG - chr7.3:72995041-72995060 None:intergenic 25.0%
ATTTGAGAGATGGTAAGTTT+AGG - chr7.3:72994920-72994939 None:intergenic 30.0%
CAAAATTCTTCAAGCTATTG+TGG + chr7.3:72995410-72995429 MS.gene001907:CDS 30.0%
GAGTGATATGTATCATCAAA+TGG + chr7.3:72995496-72995515 MS.gene001907:CDS 30.0%
GGACGTTGTATTTATGATAT+TGG + chr7.3:72995894-72995913 MS.gene001907:intron 30.0%
GTTAATTTATTCAGTTAGGG+AGG - chr7.3:72995715-72995734 None:intergenic 30.0%
TAATTTATTCAGTTAGGGAG+GGG - chr7.3:72995713-72995732 None:intergenic 30.0%
TATAGGTTAACTGAGGATAA+AGG + chr7.3:72997181-72997200 MS.gene001907:CDS 30.0%
TCTAAGTCAAATTTGAGAGA+TGG - chr7.3:72994930-72994949 None:intergenic 30.0%
TGTAACTATAACTATGCTCA+AGG + chr7.3:72995095-72995114 MS.gene001907:CDS 30.0%
TGTATTCATGTGATGGTTAT+AGG + chr7.3:72997164-72997183 MS.gene001907:CDS 30.0%
TTATTGTAAGTAGAAGCTTG+TGG - chr7.3:72995074-72995093 None:intergenic 30.0%
! ATAAAGGTTGTTTGTTGCTT+GGG + chr7.3:72997197-72997216 MS.gene001907:CDS 30.0%
! ATGATCCTATGAACTCTTTT+TGG - chr7.3:72995844-72995863 None:intergenic 30.0%
! GAAGAATCTACTATTTTGCA+TGG + chr7.3:72995443-72995462 MS.gene001907:CDS 30.0%
! GAGTTCTTAGAAGATTTTCA+AGG + chr7.3:72995296-72995315 MS.gene001907:CDS 30.0%
! GTTAGGGTTAATGTTTCTAA+TGG - chr7.3:72995042-72995061 None:intergenic 30.0%
! TCTCTCAAATTTGACTTAGA+TGG + chr7.3:72994930-72994949 MS.gene001907:CDS 30.0%
!! TGATCACTTTTCATCAACAA+AGG + chr7.3:72995325-72995344 MS.gene001907:CDS 30.0%
!! TTTTAGGTGAAGAAAGACAA+AGG - chr7.3:72995658-72995677 None:intergenic 30.0%
!!! TTCTTCTGAATGTTTTGACA+TGG + chr7.3:72995349-72995368 MS.gene001907:CDS 30.0%
AATAGAGTAGTAACACCACT+AGG + chr7.3:72996209-72996228 MS.gene001907:CDS 35.0%
AATCACCAGATAGTTCAATG+TGG + chr7.3:72994967-72994986 MS.gene001907:CDS 35.0%
ACATTGAACTATCTGGTGAT+TGG - chr7.3:72994968-72994987 None:intergenic 35.0%
ACTCAGTCGAGGATATTATT+GGG + chr7.3:72997139-72997158 MS.gene001907:CDS 35.0%
AGACAATTTGGTAGATCTTG+AGG - chr7.3:72996403-72996422 None:intergenic 35.0%
ATATATTTGCACCGGAGATT+CGG + chr7.3:72996999-72997018 MS.gene001907:CDS 35.0%
ATCACCAGATAGTTCAATGT+GGG + chr7.3:72994968-72994987 MS.gene001907:CDS 35.0%
ATGCAAATTCAAAGCCTATC+AGG + chr7.3:72995119-72995138 MS.gene001907:CDS 35.0%
ATTACCTGCTCAATTCCAAT+TGG - chr7.3:72995626-72995645 None:intergenic 35.0%
CACATCCAAAAAGAGTTCAT+AGG + chr7.3:72995836-72995855 MS.gene001907:intron 35.0%
CTAACAGTTCCTATTCCAAT+TGG + chr7.3:72995608-72995627 MS.gene001907:CDS 35.0%
GGTAGATAAACATGATGAAG+AGG - chr7.3:72996357-72996376 None:intergenic 35.0%
GTATCATCAAATGGGATCTA+TGG + chr7.3:72995505-72995524 MS.gene001907:CDS 35.0%
TAGAAGCTTGTGGTGAATTA+GGG - chr7.3:72995064-72995083 None:intergenic 35.0%
TATTCCAATTGGAATTGAGC+AGG + chr7.3:72995619-72995638 MS.gene001907:CDS 35.0%
TCTAAGAACTCTTCAATTGC+TGG - chr7.3:72995287-72995306 None:intergenic 35.0%
TGATGGTTATAGGTTAACTG+AGG + chr7.3:72997174-72997193 MS.gene001907:CDS 35.0%
TGCTCAATTCCAATTGGAAT+AGG - chr7.3:72995620-72995639 None:intergenic 35.0%
TGGTTATATGTCATCCAAAG+AGG + chr7.3:72995914-72995933 MS.gene001907:intron 35.0%
TTGGGTTTGTATTCATGTGA+TGG + chr7.3:72997157-72997176 MS.gene001907:CDS 35.0%
! ATTTGACTTAGATGGTGATG+TGG + chr7.3:72994938-72994957 MS.gene001907:CDS 35.0%
! ATTTTATGTAAGGGCAAGCT+TGG - chr7.3:72996427-72996446 None:intergenic 35.0%
! GAATCTACTATTTTGCATGG+TGG + chr7.3:72995446-72995465 MS.gene001907:CDS 35.0%
! GATAAAGGTTGTTTGTTGCT+TGG + chr7.3:72997196-72997215 MS.gene001907:CDS 35.0%
! GATGATGATGATAACGATGA+TGG - chr7.3:72996335-72996354 None:intergenic 35.0%
! GCATCTTTTGATGTTTCTCT+TGG - chr7.3:72995571-72995590 None:intergenic 35.0%
!! AAATGGAGGAAGATAATGGA+AGG + chr7.3:72997076-72997095 MS.gene001907:CDS 35.0%
!! AGGAAGATAATGGAAGGAAA+AGG + chr7.3:72997082-72997101 MS.gene001907:CDS 35.0%
!! CGATGATGGTGTTAACTTTT+TGG - chr7.3:72996321-72996340 None:intergenic 35.0%
!! GGAAGATAATGGAAGGAAAA+GGG + chr7.3:72997083-72997102 MS.gene001907:CDS 35.0%
!! TGATGATGACTTGGTTGTTA+GGG - chr7.3:72996297-72996316 None:intergenic 35.0%
!! TTGATGATGACTTGGTTGTT+AGG - chr7.3:72996298-72996317 None:intergenic 35.0%
!!! CTTTTTGGTTGATGATGACT+TGG - chr7.3:72996306-72996325 None:intergenic 35.0%
AATGCAAAGCCTCGAGAAAT+CGG - chr7.3:72996904-72996923 None:intergenic 40.0%
ACATGAAGCTACTCTTTGCA+TGG - chr7.3:72996240-72996259 None:intergenic 40.0%
ACCAAACATAGTGACACTTG+TGG + chr7.3:72996841-72996860 MS.gene001907:CDS 40.0%
AGAAATCGGCCCAAAAAGTA+CGG - chr7.3:72996890-72996909 None:intergenic 40.0%
AGAATCTCTAAGTGCAAGAC+TGG + chr7.3:72996265-72996284 MS.gene001907:CDS 40.0%
AGATCTTGAGGACTTCCATA+GGG - chr7.3:72996391-72996410 None:intergenic 40.0%
AGCAAGAAGCAAGCCATAAT+GGG + chr7.3:72996864-72996883 MS.gene001907:CDS 40.0%
ATATCCTTCAAGGCTACCAA+TGG + chr7.3:72996522-72996541 MS.gene001907:CDS 40.0%
ATCGACCTTGATATCCTTCA+AGG + chr7.3:72996512-72996531 MS.gene001907:CDS 40.0%
ATGGAAGGAAAAGGGTTCAA+AGG + chr7.3:72997091-72997110 MS.gene001907:CDS 40.0%
ATTTGTGATGCAAAACGAGG+TGG - chr7.3:72995152-72995171 None:intergenic 40.0%
CACAAGCTTTACAGCAAGAA+AGG + chr7.3:72995543-72995562 MS.gene001907:CDS 40.0%
CCAATTTGTGATGCAAAACG+AGG - chr7.3:72995155-72995174 None:intergenic 40.0%
CTTGTGGTGAATTAGGGTTA+GGG - chr7.3:72995058-72995077 None:intergenic 40.0%
GACTCAGTCGAGGATATTAT+TGG + chr7.3:72997138-72997157 MS.gene001907:CDS 40.0%
GATGGTAAGTTTAGGCTTTG+TGG - chr7.3:72994912-72994931 None:intergenic 40.0%
GGAGAAATGGAGGAAGATAA+TGG + chr7.3:72997072-72997091 MS.gene001907:CDS 40.0%
GGAGCAGTATATATTTGCAC+CGG + chr7.3:72996991-72997010 MS.gene001907:CDS 40.0%
GGTCTCTTATCATGGATAAC+AGG - chr7.3:72996817-72996836 None:intergenic 40.0%
GTAGAAGCTTGTGGTGAATT+AGG - chr7.3:72995065-72995084 None:intergenic 40.0%
TACAACGTCCATAGACATAG+AGG - chr7.3:72995884-72995903 None:intergenic 40.0%
TAGATCTTGAGGACTTCCAT+AGG - chr7.3:72996392-72996411 None:intergenic 40.0%
TATATGTAGGAGCAAGACAG+TGG + chr7.3:72996098-72996117 MS.gene001907:intron 40.0%
TGTCATCCAAAGAGGATTAG+TGG + chr7.3:72995922-72995941 MS.gene001907:intron 40.0%
TGTTGTGTCCTCTATGTCTA+TGG + chr7.3:72995873-72995892 MS.gene001907:intron 40.0%
! CCTCGTTTTGCATCACAAAT+TGG + chr7.3:72995152-72995171 MS.gene001907:CDS 40.0%
! GTCTAAAGTCATGATTGGTG+TGG + chr7.3:72995789-72995808 MS.gene001907:intron 40.0%
! GTGTTACTACTCTATTGAGC+TGG - chr7.3:72996205-72996224 None:intergenic 40.0%
! TAACTCTGTTAAGCATCGTC+CGG - chr7.3:72996642-72996661 None:intergenic 40.0%
! TCCACAAGTGTCACTATGTT+TGG - chr7.3:72996845-72996864 None:intergenic 40.0%
! TGGCTGTCTAAAGTCATGAT+TGG + chr7.3:72995784-72995803 MS.gene001907:intron 40.0%
!! CTCAGCAATTTTTGACTCCT+TGG + chr7.3:72996928-72996947 MS.gene001907:CDS 40.0%
!!! CATAATGGGCCGTACTTTTT+GGG + chr7.3:72996878-72996897 MS.gene001907:CDS 40.0%
ACTCCAGTGATCCTAAGGAA+CGG - chr7.3:72996590-72996609 None:intergenic 45.0%
AGAGGATAGAGAGACATGAG+AGG + chr7.3:72997047-72997066 MS.gene001907:CDS 45.0%
AGGACTTCCATAGGGTTTGA+TGG - chr7.3:72996383-72996402 None:intergenic 45.0%
ATACGGAAATGGAAGGCAAG+CGG - chr7.3:72995961-72995980 None:intergenic 45.0%
ATCGAATCGGTTAGGGAAAC+CGG + chr7.3:72996620-72996639 MS.gene001907:CDS 45.0%
ATGAGAGGTTGGAGAAATGG+AGG + chr7.3:72997062-72997081 MS.gene001907:CDS 45.0%
CTACTCTATTGAGCTGGTGT+AGG - chr7.3:72996199-72996218 None:intergenic 45.0%
GACATGAGAGGTTGGAGAAA+TGG + chr7.3:72997059-72997078 MS.gene001907:CDS 45.0%
GAGCAAGAAGCAAGCCATAA+TGG + chr7.3:72996863-72996882 MS.gene001907:CDS 45.0%
GATAGAGAGACATGAGAGGT+TGG + chr7.3:72997051-72997070 MS.gene001907:CDS 45.0%
GCTTCCCACATTGAACTATC+TGG - chr7.3:72994975-72994994 None:intergenic 45.0%
GCTTGTGGTGAATTAGGGTT+AGG - chr7.3:72995059-72995078 None:intergenic 45.0%
GGACTTCCATAGGGTTTGAT+GGG - chr7.3:72996382-72996401 None:intergenic 45.0%
GGATATCAAGGTCGATGACA+TGG - chr7.3:72996508-72996527 None:intergenic 45.0%
GGCAAGCTTGGTAGACAATT+TGG - chr7.3:72996415-72996434 None:intergenic 45.0%
GGGAATACATGCTAGCAAGA+AGG + chr7.3:72996171-72996190 MS.gene001907:CDS 45.0%
GTCACTGCATTAGGACTTAG+AGG - chr7.3:72997121-72997140 None:intergenic 45.0%
TACCTTCCCATCAAACCCTA+TGG + chr7.3:72996373-72996392 MS.gene001907:CDS 45.0%
TCCTTAGGATCACTGGAGTT+GGG + chr7.3:72996591-72996610 MS.gene001907:CDS 45.0%
TGGTGCTTGGTCTCTTATCA+TGG - chr7.3:72996825-72996844 None:intergenic 45.0%
TTCCATAGGGTTTGATGGGA+AGG - chr7.3:72996378-72996397 None:intergenic 45.0%
TTCCTTAGGATCACTGGAGT+TGG + chr7.3:72996590-72996609 MS.gene001907:CDS 45.0%
! AAGGTTGTTTGTTGCTTGGG+TGG + chr7.3:72997200-72997219 MS.gene001907:CDS 45.0%
! CCAAAAAGTACGGCCCATTA+TGG - chr7.3:72996880-72996899 None:intergenic 45.0%
! CCTCAAGTTGTTCTCCAACA+GGG - chr7.3:72996697-72996716 None:intergenic 45.0%
! GGTAGCCTTGAAGGATATCA+AGG - chr7.3:72996520-72996539 None:intergenic 45.0%
! TCCTCAAGTTGTTCTCCAAC+AGG - chr7.3:72996698-72996717 None:intergenic 45.0%
!! CTCGAAAATGGCTTGGTTAG+CGG - chr7.3:72996462-72996481 None:intergenic 45.0%
!! GTGTCACTATGTTTGGTGCT+TGG - chr7.3:72996838-72996857 None:intergenic 45.0%
!!! CCATAATGGGCCGTACTTTT+TGG + chr7.3:72996877-72996896 MS.gene001907:CDS 45.0%
AACACGGTGGAGACGGTTAA+CGG - chr7.3:72996774-72996793 None:intergenic 50.0%
ACACGGCGGTTAAACATGTG+CGG - chr7.3:72996728-72996747 None:intergenic 50.0%
CAAACGCCTCGAAAATGGCT+TGG - chr7.3:72996469-72996488 None:intergenic 50.0%
CAAGTTGTTCTCCAACAGGG+TGG - chr7.3:72996694-72996713 None:intergenic 50.0%
CACAGGAAAAGTAGCGTCCA+AGG - chr7.3:72996948-72996967 None:intergenic 50.0%
CACATGTTTAACCGCCGTGT+AGG + chr7.3:72996728-72996747 MS.gene001907:CDS 50.0%
CCATGCAGAAGCAGCGATAA+TGG - chr7.3:72997236-72997255 None:intergenic 50.0%
CCATTATCGCTGCTTCTGCA+TGG + chr7.3:72997233-72997252 MS.gene001907:CDS 50.0%
CCCTGTTGGAGAACAACTTG+AGG + chr7.3:72996694-72996713 MS.gene001907:CDS 50.0%
CGAGATGATTGCCAGGAACA+CGG - chr7.3:72996790-72996809 None:intergenic 50.0%
CGTGTTCCTGGCAATCATCT+CGG + chr7.3:72996788-72996807 MS.gene001907:CDS 50.0%
CTAATGCAGTGACTCAGTCG+AGG + chr7.3:72997128-72997147 MS.gene001907:CDS 50.0%
CTCGACTGAGTCACTGCATT+AGG - chr7.3:72997130-72997149 None:intergenic 50.0%
CTTTGCATGGAGTCACCTAG+TGG - chr7.3:72996227-72996246 None:intergenic 50.0%
GAGGTGGTGAACAACCTGAT+AGG - chr7.3:72995136-72995155 None:intergenic 50.0%
GTGCTGAAGCAGTGGCAAAA+GGG + chr7.3:72996150-72996169 MS.gene001907:CDS 50.0%
GTGTTCCTGGCAATCATCTC+GGG + chr7.3:72996789-72996808 MS.gene001907:CDS 50.0%
TACGGAAATGGAAGGCAAGC+GGG - chr7.3:72995960-72995979 None:intergenic 50.0%
TCTAGCATGTGCTGAAGCAG+TGG + chr7.3:72996142-72996161 MS.gene001907:CDS 50.0%
TGCCTCAAACGCCTCGAAAA+TGG - chr7.3:72996474-72996493 None:intergenic 50.0%
TGCTGAAGCAGTGGCAAAAG+GGG + chr7.3:72996151-72996170 MS.gene001907:CDS 50.0%
TGTGCTGAAGCAGTGGCAAA+AGG + chr7.3:72996149-72996168 MS.gene001907:CDS 50.0%
!! AGCCATTTTCGAGGCGTTTG+AGG + chr7.3:72996469-72996488 MS.gene001907:CDS 50.0%
!! CGCTAACCAAGCCATTTTCG+AGG + chr7.3:72996460-72996479 MS.gene001907:CDS 50.0%
!! CTTTTTGGGCCGATTTCTCG+AGG + chr7.3:72996892-72996911 MS.gene001907:CDS 50.0%
!! TCCCTAACCGATTCGATGCA+CGG - chr7.3:72996617-72996636 None:intergenic 50.0%
!!! CTTGGACGCTACTTTTCCTG+TGG + chr7.3:72996946-72996965 MS.gene001907:CDS 50.0%
ACCGGAGATTCGGAACATCG+TGG + chr7.3:72997009-72997028 MS.gene001907:CDS 55.0%
AGGTTCCCGAGATGATTGCC+AGG - chr7.3:72996797-72996816 None:intergenic 55.0%
AGTTGGGCCGTGCATCGAAT+CGG + chr7.3:72996607-72996626 MS.gene001907:CDS 55.0%
CAACAGGGTGGAACTCGAAG+GGG - chr7.3:72996682-72996701 None:intergenic 55.0%
CATCGTGGCATGTGAAGGTG+AGG + chr7.3:72997024-72997043 MS.gene001907:CDS 55.0%
CCAACAGGGTGGAACTCGAA+GGG - chr7.3:72996683-72996702 None:intergenic 55.0%
CCAATGGCCTGCATTCATGC+AGG + chr7.3:72996538-72996557 MS.gene001907:CDS 55.0%
CCTGCATGAATGCAGGCCAT+TGG - chr7.3:72996541-72996560 None:intergenic 55.0%
CGGAACATCGTGGCATGTGA+AGG + chr7.3:72997019-72997038 MS.gene001907:CDS 55.0%
GATGATTGCCAGGAACACGG+TGG - chr7.3:72996787-72996806 None:intergenic 55.0%
GCCAATGCCTGCATGAATGC+AGG - chr7.3:72996548-72996567 None:intergenic 55.0%
GCCACGATGTTCCGAATCTC+CGG - chr7.3:72997013-72997032 None:intergenic 55.0%
GCCCAACTCCAGTGATCCTA+AGG - chr7.3:72996595-72996614 None:intergenic 55.0%
GCCGTGCATCGAATCGGTTA+GGG + chr7.3:72996613-72996632 MS.gene001907:CDS 55.0%
GCCTGCATTCATGCAGGCAT+TGG + chr7.3:72996544-72996563 MS.gene001907:CDS 55.0%
GCTCCGTTCCTTAGGATCAC+TGG + chr7.3:72996584-72996603 MS.gene001907:CDS 55.0%
GCTGCGCCACTAATCCTCTT+TGG - chr7.3:72995931-72995950 None:intergenic 55.0%
TACTGCTCCACCTTAGCCCT+TGG - chr7.3:72996980-72996999 None:intergenic 55.0%
TCCAACAGGGTGGAACTCGA+AGG - chr7.3:72996684-72996703 None:intergenic 55.0%
TCCTGTGGAGTCAGCACCAA+GGG + chr7.3:72996961-72996980 MS.gene001907:CDS 55.0%
TGGCATGTGAAGGTGAGGAG+AGG + chr7.3:72997029-72997048 MS.gene001907:CDS 55.0%
TTCCTGTGGAGTCAGCACCA+AGG + chr7.3:72996960-72996979 MS.gene001907:CDS 55.0%
! CAGGCCATTGGTAGCCTTGA+AGG - chr7.3:72996529-72996548 None:intergenic 55.0%
!! TCATGCAGGCATTGGCTGCA+CGG + chr7.3:72996552-72996571 MS.gene001907:CDS 55.0%
AACCGTCTCCACCGTGTTCC+TGG + chr7.3:72996776-72996795 MS.gene001907:CDS 60.0%
GGAGTCAGCACCAAGGGCTA+AGG + chr7.3:72996967-72996986 MS.gene001907:CDS 60.0%
GGCCGTGCATCGAATCGGTT+AGG + chr7.3:72996612-72996631 MS.gene001907:CDS 60.0%
GTCAGCACCAAGGGCTAAGG+TGG + chr7.3:72996970-72996989 MS.gene001907:CDS 60.0%
GTTTAACCGCCGTGTAGGCG+AGG + chr7.3:72996733-72996752 MS.gene001907:CDS 60.0%
TGCCAGGAACACGGTGGAGA+CGG - chr7.3:72996781-72996800 None:intergenic 60.0%
! CCCTTCGAGTTCCACCCTGT+TGG + chr7.3:72996680-72996699 MS.gene001907:CDS 60.0%
CCAAAGCCTCGCCTACACGG+CGG - chr7.3:72996742-72996761 None:intergenic 65.0%
CCGCCAAAGCCTCGCCTACA+CGG - chr7.3:72996745-72996764 None:intergenic 65.0%
! CCGTGTAGGCGAGGCTTTGG+CGG + chr7.3:72996742-72996761 MS.gene001907:CDS 65.0%
!! CCTAAGGAACGGAGCACCGC+CGG - chr7.3:72996579-72996598 None:intergenic 65.0%
!! CTAAGGAACGGAGCACCGCC+GGG - chr7.3:72996578-72996597 None:intergenic 65.0%
!! GCCCTTGGTGCTGACTCCAC+AGG - chr7.3:72996965-72996984 None:intergenic 65.0%
CCGCCGTGTAGGCGAGGCTT+TGG + chr7.3:72996739-72996758 MS.gene001907:CDS 70.0%
CCGGCGGTGCTCCGTTCCTT+AGG + chr7.3:72996576-72996595 MS.gene001907:CDS 70.0%
!! CAGGCATTGGCTGCACGGCC+CGG + chr7.3:72996557-72996576 MS.gene001907:CDS 70.0%
!! GCATTGGCTGCACGGCCCGG+CGG + chr7.3:72996560-72996579 MS.gene001907:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 72994768 72997264 72994768 ID=MS.gene001907
chr7.3 mRNA 72994768 72997264 72994768 ID=MS.gene001907.t1;Parent=MS.gene001907
chr7.3 exon 72994768 72995640 72994768 ID=MS.gene001907.t1.exon1;Parent=MS.gene001907.t1
chr7.3 CDS 72994768 72995640 72994768 ID=cds.MS.gene001907.t1;Parent=MS.gene001907.t1
chr7.3 exon 72996107 72997264 72996107 ID=MS.gene001907.t1.exon2;Parent=MS.gene001907.t1
chr7.3 CDS 72996107 72997264 72996107 ID=cds.MS.gene001907.t1;Parent=MS.gene001907.t1
Gene Sequence

>MS.gene001907

ATGATGAATTCACTTTGTGGAAGCTCAAATTCTCTCAAAGAAAAATGTCTTCAACCCAATTCTTCAAATCAAACAAATACTCACTCAAAGAAAAATGCCACAAATTCTTGTAGTGATTTAGAGCAAATTAATGTTCTAACTCCACAAAGCCTAAACTTACCATCTCTCAAATTTGACTTAGATGGTGATGTGGAAGTCCAATCACCAGATAGTTCAATGTGGGAAGCATTTTTCAATGACCATTTAGATAATGATTTCATGATATCATCACCCATTAGAAACATTAACCCTAACCCTAATTCACCACAAGCTTCTACTTACAATAATTGTAACTATAACTATGCTCAAGGCATGCAAATTCAAAGCCTATCAGGTTGTTCACCACCTCGTTTTGCATCACAAATTGGTTCATTAAATAGTAATAATCAACAAAAAGGGAAAGGACTTAGTCCACTTCATAGAGTATTTAATTCACCAAATAATCAATATATGCAACATGTTGAAAATCTTTCATTGCCAGCAATTGAAGAGTTCTTAGAAGATTTTCAAGGTGATGTTGATCACTTTTCATCAACAAAGGTTTCTTCTGAATGTTTTGACATGGAAACTCCAATATCAACAATTTTGGATAGTTTAACAATGCAAAATTCTTCAAGCTATTGTGGTTCAGTTAATGAAGAATCTACTATTTTGCATGGTGGTAATTCTTCTTCTCAACTTTCTCAAGAGAGTGATATGTATCATCAAATGGGATCTATGGCTAGTGCTTCTCTTTCACAAGCTTTACAGCAAGAAAGGTACCAAGAGAAACATCAAAAGATGCAAGCTCAACAACAGAGTCTAACAGTTCCTATTCCAATTGGAATTGAGCAGGTAATAAAATCTTTCCTTTGTCTTTCTTCACCTAAAATCTTAATTAATTCAATTTTGAAGTTTTTTTATCCCCTCCCTAACTGAATAAATTAACATAATCAATAGTCAATCTACCATTTATTATCAATTTTTCTAATTCAACTTGGCTGTCTAAAGTCATGATTGGTGTGGCAATGCAAACTATATTATAAGATGCACATCCAAAAAGAGTTCATAGGATCATGCATAACAATGTTGTGTCCTCTATGTCTATGGACGTTGTATTTATGATATTGGTTATATGTCATCCAAAGAGGATTAGTGGCGCAGCTTATTGCCCGCTTGCCTTCCATTTCCGTATTAATTATTTAATACTTGATGTACATCTGAATGATCATGATCTAAACAAATATATTTGAAGCAATTTACAAGATTTAATTATTTTTATGATTTCTGAACTTAAAAGCTATATATCTAATATATGTAGGAGCAAGACAGTGGACTTCAACTAGTGCACTTGCTTCTAGCATGTGCTGAAGCAGTGGCAAAAGGGGAATACATGCTAGCAAGAAGGTACCTACACCAGCTCAATAGAGTAGTAACACCACTAGGTGACTCCATGCAAAGAGTAGCTTCATGTTTCACAGAATCTCTAAGTGCAAGACTGGCTGCAACCCTAACAACCAAGTCATCATCAACCAAAAAGTTAACACCATCATCGTTATCATCATCATCCTCTTCATCATGTTTATCTACCTTCCCATCAAACCCTATGGAAGTCCTCAAGATCTACCAAATTGTCTACCAAGCTTGCCCTTACATAAAATTTGCACACTTTACCGCTAACCAAGCCATTTTCGAGGCGTTTGAGGCAGAAGAACGTGTCCATGTCATCGACCTTGATATCCTTCAAGGCTACCAATGGCCTGCATTCATGCAGGCATTGGCTGCACGGCCCGGCGGTGCTCCGTTCCTTAGGATCACTGGAGTTGGGCCGTGCATCGAATCGGTTAGGGAAACCGGACGATGCTTAACAGAGTTAGCTCATTCTCTTCGTATCCCCTTCGAGTTCCACCCTGTTGGAGAACAACTTGAGGATCTAAAACCGCACATGTTTAACCGCCGTGTAGGCGAGGCTTTGGCGGTTAACACCGTTAACCGTCTCCACCGTGTTCCTGGCAATCATCTCGGGAACCTGTTATCCATGATAAGAGACCAAGCACCAAACATAGTGACACTTGTGGAGCAAGAAGCAAGCCATAATGGGCCGTACTTTTTGGGCCGATTTCTCGAGGCTTTGCATTACTACTCAGCAATTTTTGACTCCTTGGACGCTACTTTTCCTGTGGAGTCAGCACCAAGGGCTAAGGTGGAGCAGTATATATTTGCACCGGAGATTCGGAACATCGTGGCATGTGAAGGTGAGGAGAGGATAGAGAGACATGAGAGGTTGGAGAAATGGAGGAAGATAATGGAAGGAAAAGGGTTCAAAGGAGTGCCTCTAAGTCCTAATGCAGTGACTCAGTCGAGGATATTATTGGGTTTGTATTCATGTGATGGTTATAGGTTAACTGAGGATAAAGGTTGTTTGTTGCTTGGGTGGCAAGACAGAGCCATTATCGCTGCTTCTGCATGGCGATGCTGA
Protein sequence

>MS.gene001907.t1

MMNSLCGSSNSLKEKCLQPNSSNQTNTHSKKNATNSCSDLEQINVLTPQSLNLPSLKFDLDGDVEVQSPDSSMWEAFFNDHLDNDFMISSPIRNINPNPNSPQASTYNNCNYNYAQGMQIQSLSGCSPPRFASQIGSLNSNNQQKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDFQGDVDHFSSTKVSSECFDMETPISTILDSLTMQNSSSYCGSVNEESTILHGGNSSSQLSQESDMYHQMGSMASASLSQALQQERYQEKHQKMQAQQQSLTVPIPIGIEQEQDSGLQLVHLLLACAEAVAKGEYMLARRYLHQLNRVVTPLGDSMQRVASCFTESLSARLAATLTTKSSSTKKLTPSSLSSSSSSSCLSTFPSNPMEVLKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNTVNRLHRVPGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVESAPRAKVEQYIFAPEIRNIVACEGEERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC