AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene001921

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001921.t1 MTR_7g427710 87.957 656 58 5 15 663 1 642 0.0 1180
MS.gene001921.t1 MTR_6g477820 63.836 730 192 12 1 662 1 726 0.0 875
MS.gene001921.t1 MTR_7g427690 79.691 453 53 7 140 583 26 448 0.0 718
MS.gene001921.t1 MTR_8g432540 45.134 709 308 16 25 661 109 808 0.0 561
MS.gene001921.t1 MTR_7g076080 44.539 705 311 17 24 661 85 776 0.0 557
MS.gene001921.t1 MTR_2g088470 44.105 687 311 13 29 660 65 733 0.0 538
MS.gene001921.t1 MTR_4g047800 42.411 705 339 14 11 660 38 730 1.40e-178 526
MS.gene001921.t1 MTR_5g029320 42.635 706 334 14 20 659 78 778 2.21e-177 525
MS.gene001921.t1 MTR_1g101280 41.360 706 330 17 29 659 54 750 2.45e-172 510
MS.gene001921.t1 MTR_7g427700 84.083 289 30 3 15 297 1 279 7.99e-170 492
MS.gene001921.t1 MTR_7g427700 89.744 156 16 0 508 663 280 435 1.21e-89 286
MS.gene001921.t1 MTR_2g101720 37.406 663 363 12 36 661 144 791 2.04e-154 466
MS.gene001921.t1 MTR_0198s0030 37.696 703 348 16 36 659 60 751 2.76e-141 430
MS.gene001921.t1 MTR_2g030570 37.698 695 361 14 21 659 17 695 5.29e-138 420
MS.gene001921.t1 MTR_5g005600 36.850 692 340 21 38 659 52 716 3.42e-131 403
MS.gene001921.t1 MTR_2g030600 37.243 682 358 15 31 659 24 688 1.32e-130 400
MS.gene001921.t1 MTR_2g030660 35.650 662 375 18 25 659 10 647 3.23e-114 357
MS.gene001921.t1 MTR_0653s0020 83.770 191 22 2 360 549 1 183 1.55e-107 324
MS.gene001921.t1 MTR_0653s0010 90.678 118 11 0 546 663 1 118 1.52e-66 214
MS.gene001921.t1 MTR_2g083330 29.783 507 303 13 176 660 51 526 7.34e-61 213
MS.gene001921.t1 MTR_7g027605 94.505 91 5 0 267 357 1 91 2.01e-58 191
MS.gene001921.t1 MTR_2g083350 30.178 507 303 15 176 660 55 532 4.79e-58 205
MS.gene001921.t1 MTR_7g027265 61.765 136 41 1 15 139 1 136 3.94e-48 166
MS.gene001921.t1 MTR_7g427670 85.882 85 12 0 85 169 32 116 1.03e-40 145
MS.gene001921.t1 MTR_5g046040 48.750 160 68 3 8 156 14 170 4.37e-38 145
MS.gene001921.t1 MTR_7g427720 89.474 76 8 0 588 663 24 99 4.55e-38 136
MS.gene001921.t1 MTR_2g030690 30.952 294 168 8 384 659 1 277 1.06e-27 113
MS.gene001921.t1 MTR_2g451350 44.030 134 73 2 192 324 1 133 4.08e-26 104
MS.gene001921.t1 MTR_7g027245 68.831 77 16 1 187 263 19 87 1.89e-25 101
MS.gene001921.t1 MTR_3g109800 21.517 725 394 31 37 660 23 673 3.94e-18 89.0
MS.gene001921.t1 MTR_3g109800 21.517 725 394 31 37 660 23 673 5.88e-18 88.6
MS.gene001921.t1 MTR_3g109800 21.517 725 394 31 37 660 23 673 7.91e-18 88.2
MS.gene001921.t1 MTR_6g027290 32.558 129 75 1 42 158 36 164 3.71e-17 80.1
MS.gene001921.t1 MTR_4g058970 21.528 720 396 30 1 629 7 648 1.34e-16 84.3
MS.gene001921.t1 MTR_2g030130 21.569 510 307 18 37 503 16 475 1.85e-16 84.0
MS.gene001921.t1 MTR_6g086740 77.083 48 8 1 618 662 3 50 1.06e-14 68.9
MS.gene001921.t1 MTR_2g030720 32.773 119 70 3 37 152 24 135 1.21e-13 69.3
MS.gene001921.t1 MTR_2g451350 50.000 60 30 0 265 324 35 94 8.24e-12 62.4
MS.gene001921.t1 MTR_2g030700 30.894 123 67 4 37 149 24 138 4.20e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001921.t1 AT1G73360 52.436 698 255 14 30 662 31 716 0.0 665
MS.gene001921.t1 AT1G17920 52.471 688 241 18 34 662 24 684 0.0 645
MS.gene001921.t1 AT1G17920 52.471 688 241 18 34 662 24 684 0.0 645
MS.gene001921.t1 AT4G04890 45.058 688 309 17 31 661 62 737 0.0 557
MS.gene001921.t1 AT4G04890 45.058 688 309 17 31 661 62 737 0.0 557
MS.gene001921.t1 AT4G21750 43.944 710 307 16 31 661 62 759 0.0 539
MS.gene001921.t1 AT4G21750 43.944 710 307 16 31 661 62 759 0.0 539
MS.gene001921.t1 AT4G21750 43.944 710 307 16 31 661 62 759 0.0 539
MS.gene001921.t1 AT4G21750 43.944 710 307 16 31 661 62 759 0.0 539
MS.gene001921.t1 AT1G05230 42.651 694 319 15 20 661 50 716 7.55e-180 528
MS.gene001921.t1 AT1G05230 42.529 696 319 16 20 661 50 718 5.77e-178 524
MS.gene001921.t1 AT1G05230 42.529 696 319 16 20 661 50 718 5.77e-178 524
MS.gene001921.t1 AT1G05230 42.529 696 319 16 20 661 50 718 5.77e-178 524
MS.gene001921.t1 AT1G05230 42.529 696 319 16 20 661 50 718 5.77e-178 524
MS.gene001921.t1 AT1G05230 42.529 696 319 16 20 661 50 718 5.77e-178 524
MS.gene001921.t1 AT1G05230 42.529 696 319 16 20 661 50 718 5.77e-178 524
MS.gene001921.t1 AT1G05230 42.529 696 319 16 20 661 50 718 5.77e-178 524
MS.gene001921.t1 AT1G05230 42.529 696 319 16 20 661 50 718 5.77e-178 524
MS.gene001921.t1 AT1G05230 42.529 696 319 16 20 661 50 718 5.77e-178 524
MS.gene001921.t1 AT1G05230 42.529 696 319 16 20 661 50 718 5.77e-178 524
MS.gene001921.t1 AT4G00730 43.504 685 315 14 31 661 134 800 1.27e-175 520
MS.gene001921.t1 AT3G61150 41.620 716 327 19 24 661 103 805 3.35e-174 517
MS.gene001921.t1 AT5G52170 40.843 688 337 17 13 662 31 686 4.98e-154 461
MS.gene001921.t1 AT5G52170 40.843 688 332 18 13 662 31 681 3.04e-153 459
MS.gene001921.t1 AT5G52170 40.843 688 332 18 13 662 31 681 3.04e-153 459
MS.gene001921.t1 AT3G03260 38.149 713 344 16 20 662 12 697 6.88e-146 441
MS.gene001921.t1 AT1G05230 41.918 563 271 11 20 537 50 601 1.31e-143 432
MS.gene001921.t1 AT5G46880 39.776 714 327 19 31 659 111 806 6.70e-142 434
MS.gene001921.t1 AT5G46880 39.776 714 327 19 31 659 111 806 6.70e-142 434
MS.gene001921.t1 AT5G46880 39.776 714 327 19 31 659 111 806 6.70e-142 434
MS.gene001921.t1 AT1G79840 37.744 665 363 17 27 659 39 684 9.33e-141 427
MS.gene001921.t1 AT1G79840 37.744 665 363 17 27 659 39 684 9.33e-141 427
MS.gene001921.t1 AT1G79840 37.744 665 363 17 27 659 97 742 5.22e-140 427
MS.gene001921.t1 AT1G79840 37.744 665 363 17 27 659 126 771 1.18e-139 427
MS.gene001921.t1 AT4G17710 40.769 650 330 17 31 659 88 703 8.07e-136 415
MS.gene001921.t1 AT5G17320 36.039 727 357 19 20 661 14 717 2.50e-124 385
MS.gene001921.t1 AT2G32370 35.294 697 369 17 18 661 55 722 3.54e-124 385
MS.gene001921.t1 AT1G79840 38.462 533 295 12 27 535 97 620 7.85e-119 368
MS.gene001921.t1 AT1G34650 36.080 704 351 13 38 661 23 707 3.08e-116 364
MS.gene001921.t1 AT4G00730 44.755 429 193 8 31 422 134 555 1.43e-113 353
MS.gene001921.t1 AT3G03260 38.879 535 272 11 20 507 12 538 5.12e-112 348
MS.gene001921.t1 AT4G25530 33.577 685 369 19 26 660 35 683 2.17e-101 325
MS.gene001921.t1 AT1G79840 41.337 404 213 11 27 415 97 491 8.50e-94 300
MS.gene001921.t1 AT5G07260 26.975 519 313 19 97 588 10 489 6.52e-40 154
MS.gene001921.t1 AT5G07260 26.590 519 310 19 97 588 10 484 9.03e-40 154
MS.gene001921.t1 AT5G60690 22.667 525 307 19 17 503 8 471 8.85e-19 91.7
MS.gene001921.t1 AT1G30490 21.888 466 309 14 14 464 1 426 4.54e-15 79.7
MS.gene001921.t1 AT4G26920 26.258 457 247 23 192 639 72 447 2.54e-14 76.3
MS.gene001921.t1 AT2G34710 22.674 516 296 19 37 503 28 489 5.52e-14 76.3

Find 119 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTTGGTTGAAATGTTTA+TGG 0.116059 7.3:-72716885 MS.gene001921:CDS
CCAATTGTTAATGGACTTAT+TGG 0.149364 7.3:-72714141 MS.gene001921:CDS
TGGAAACTAATGAGCCTTTA+TGG 0.155056 7.3:-72717051 MS.gene001921:CDS
TAACTGCATTTCCGTGTTTA+AGG 0.200891 7.3:-72715035 MS.gene001921:intron
GAGTCTGTTCCAATTGTTAA+TGG 0.231563 7.3:-72714150 MS.gene001921:CDS
GACAGTTGCATTTCAAATTA+TGG 0.240621 7.3:-72714196 MS.gene001921:CDS
CTTGCTTATCTTATGGATTC+AGG 0.246109 7.3:-72716036 MS.gene001921:CDS
ATCCTACTAAGATCAAATTT+TGG 0.254513 7.3:-72718119 MS.gene001921:CDS
CATTCTCTTCTATGAGTATA+CGG 0.271618 7.3:+72717928 None:intergenic
TGTTTCTTCTAAGAGACTTA+TGG 0.294415 7.3:-72718791 MS.gene001921:CDS
TGAAAGGCTTGCTTATCTTA+TGG 0.295191 7.3:-72716043 MS.gene001921:CDS
AACAATGATCCTCCAATGTT+TGG 0.296916 7.3:+72714219 None:intergenic
ACCTGCTGGTCTCTCTAATA+AGG 0.317654 7.3:-72717131 MS.gene001921:CDS
AGGAAGTAAAATTCTCTAAT+AGG 0.322633 7.3:+72716453 None:intergenic
ATCAATAGTGGAGTTGCATT+TGG 0.344218 7.3:-72716102 MS.gene001921:CDS
ACTCTTACGCTTCAAGCCTT+TGG 0.345673 7.3:+72718686 None:intergenic
CGAGGCCATCGTCTTCCTTC+CGG 0.346534 7.3:-72716342 MS.gene001921:CDS
TTTGCCATTGTCACAATAGT+TGG 0.352656 7.3:+72716737 None:intergenic
GAAGCTTCGATGCGAATATT+CGG 0.355204 7.3:+72716941 None:intergenic
TTCATCCAAAACATGCCTAA+TGG 0.359795 7.3:-72716315 MS.gene001921:CDS
CAAGGAGGTAATAGTGATAA+TGG 0.367284 7.3:-72714267 MS.gene001921:CDS
TCTTAGTGGTTCTTTGCAAT+TGG 0.371610 7.3:-72716678 MS.gene001921:intron
ACAATGATCCTCCAATGTTT+GGG 0.382083 7.3:+72714220 None:intergenic
CCAATAAGTCCATTAACAAT+TGG 0.391204 7.3:+72714141 None:intergenic
TATAGAAATGTTATCAATAG+TGG 0.402037 7.3:-72716114 MS.gene001921:CDS
ATCGAAGCTTCTAGAAAATC+TGG 0.403423 7.3:-72716929 MS.gene001921:CDS
CTCATTATTGATGAATCAAC+AGG 0.412591 7.3:+72714372 None:intergenic
GCACTTAGCGCCTCACCATT+AGG 0.416272 7.3:+72715641 None:intergenic
CGAACGAAGGATGGTCTTAG+TGG 0.418990 7.3:-72716692 MS.gene001921:CDS
TTTCTTCTGATACTCATAAG+AGG 0.424848 7.3:-72718747 MS.gene001921:CDS
GCAGGTTGGTAAGGAACATT+TGG 0.425200 7.3:+72717148 None:intergenic
GGTTTCGCAATTACTTCTGA+TGG 0.425225 7.3:-72714312 MS.gene001921:CDS
ATGCATCAGCTAGTCATAGA+TGG 0.431673 7.3:-72715709 MS.gene001921:CDS
TATTATGAATGCCTCGACTT+TGG 0.438813 7.3:-72716900 MS.gene001921:CDS
CCTATAAAACAATGTTCCCT+AGG 0.444280 7.3:-72716985 MS.gene001921:CDS
TTTCTATAGAGCATATGAAC+TGG 0.444548 7.3:+72716129 None:intergenic
AACACGGAAATGCAGTTACC+TGG 0.445852 7.3:+72715040 None:intergenic
TACATTCAATTACTACCATC+AGG 0.449951 7.3:-72714333 MS.gene001921:CDS
TTGATGAACTTCCTCGTAGA+AGG 0.450698 7.3:+72717176 None:intergenic
GAAAGTTGTGTGGACTCATC+AGG 0.456149 7.3:-72714414 MS.gene001921:CDS
GAGAGACCAGCAGGTTGGTA+AGG 0.458220 7.3:+72717139 None:intergenic
GGAACAGACTCCATGTTAGA+TGG 0.463514 7.3:+72714162 None:intergenic
CAAAATGATAATAATATTCA+AGG 0.464579 7.3:-72714285 MS.gene001921:CDS
AACCAAAATTTGATCTTAGT+AGG 0.469554 7.3:+72718117 None:intergenic
ATCGTGGTCCTCTTTCCATC+AGG 0.476489 7.3:+72715776 None:intergenic
AACAGAGACTGTGGAGGGAG+AGG 0.478361 7.3:+72715599 None:intergenic
TACTGTAAACAATTTGAGAA+AGG 0.478598 7.3:-72716426 MS.gene001921:CDS
TAAGTGCATCTACTACCATT+TGG 0.483179 7.3:-72715625 MS.gene001921:CDS
CGACGAAAGGAAAAGATCTC+AGG 0.484990 7.3:-72715564 MS.gene001921:intron
CTCTTGAACATCATTACCAT+TGG 0.494619 7.3:+72715090 None:intergenic
AGCATTGCAGCTGGATACAC+TGG 0.498024 7.3:-72717214 MS.gene001921:CDS
TCCTTATTAGAGAGACCAGC+AGG 0.504163 7.3:+72717130 None:intergenic
GTAAACAATTTGAGAAAGGA+TGG 0.505133 7.3:-72716422 MS.gene001921:CDS
TTTAACTGATTATTAGCCCT+AGG 0.509375 7.3:+72716968 None:intergenic
ATAGCAAATGTTTCGCGCCC+AGG 0.511234 7.3:-72715058 MS.gene001921:CDS
TCAATTTCTTGAACGACGAA+AGG 0.524692 7.3:-72715577 MS.gene001921:CDS
CGGAAGGAAGACGATGGCCT+CGG 0.526070 7.3:+72716343 None:intergenic
TGGATAAAATCAAACACTGA+TGG 0.528970 7.3:-72717031 MS.gene001921:CDS
TAGTCGAATGTACTTTCCAA+TGG 0.529852 7.3:-72715106 MS.gene001921:CDS
CTCATTCAAAGTTGATATTG+TGG 0.534041 7.3:+72715685 None:intergenic
TCAGTGATTCCATCACCTGA+TGG 0.534239 7.3:-72715791 MS.gene001921:intron
GTGAGGAAGAGTCAGCCTAA+TGG 0.538342 7.3:-72715656 MS.gene001921:CDS
TTAACTGATTATTAGCCCTA+GGG 0.545795 7.3:+72716969 None:intergenic
TTTGATCTTAGTAGGATCCA+TGG 0.546590 7.3:+72718125 None:intergenic
GTCCTCTTTCCATCAGGTGA+TGG 0.553963 7.3:+72715782 None:intergenic
AGTTATATCTTCTCGAACGA+AGG 0.555948 7.3:-72716705 MS.gene001921:CDS
TTCTATAGAGCATATGAACT+GGG 0.555956 7.3:+72716130 None:intergenic
CACTTCAAAGAATGTGTGAA+AGG 0.558355 7.3:-72716059 MS.gene001921:CDS
GCTACCTCCTTCGATATGAC+AGG 0.559311 7.3:+72716008 None:intergenic
AGAGTATCTAGCATTGCAGC+TGG 0.559790 7.3:-72717223 MS.gene001921:CDS
ATATCTTCTCGAACGAAGGA+TGG 0.565148 7.3:-72716701 MS.gene001921:CDS
ATTTCCAACTATTGTGACAA+TGG 0.566424 7.3:-72716741 MS.gene001921:CDS
CTCCTTCGATATGACAGGAA+TGG 0.566896 7.3:+72716013 None:intergenic
AGCTCAAACCCAAACATTGG+AGG 0.568422 7.3:-72714228 MS.gene001921:CDS
GAAGTAATTGCGAAACCTGA+TGG 0.568742 7.3:+72714318 None:intergenic
GAATAGAAGGACTCAGATGA+AGG 0.569088 7.3:-72718091 MS.gene001921:intron
TTCCATCACCTGATGGAAAG+AGG 0.570470 7.3:-72715784 MS.gene001921:CDS
CAATGGTAATGATGTTCAAG+AGG 0.572359 7.3:-72715089 MS.gene001921:CDS
ACAAGCTCAAACCCAAACAT+TGG 0.579839 7.3:-72714231 MS.gene001921:CDS
AATGTTCCTTACCAACCTGC+TGG 0.579986 7.3:-72717145 MS.gene001921:CDS
GATCTGAGAATATAGCTATG+AGG 0.582816 7.3:-72717896 MS.gene001921:CDS
TGAAAATGCAATGCAAGAGC+TGG 0.585649 7.3:-72717083 MS.gene001921:CDS
CTATAAAACAATGTTCCCTA+GGG 0.588517 7.3:-72716984 MS.gene001921:CDS
ACAAAGGTTGCAGTTAGGCA+AGG 0.593066 7.3:-72718154 MS.gene001921:CDS
TGGAGGGAGAGGTAGCCAAA+TGG 0.596344 7.3:+72715610 None:intergenic
CATGCCTAATGGAAAATCCA+AGG 0.599227 7.3:-72716304 MS.gene001921:intron
GGCCATTCCTGTCATATCGA+AGG 0.599475 7.3:-72716015 MS.gene001921:CDS
ATACCAATAAGGAACTACAT+AGG 0.600755 7.3:+72714081 None:intergenic
GGTAGTAATTGAATGTATGA+AGG 0.601567 7.3:+72714339 None:intergenic
TACTTGGATTGAACATGTTG+AGG 0.602638 7.3:-72716166 MS.gene001921:CDS
CAAATTGTTTACAGTAACGT+AGG 0.603339 7.3:+72716433 None:intergenic
TAAACAATTTGAGAAAGGAT+GGG 0.603561 7.3:-72716421 MS.gene001921:CDS
AATTCTCTAATAGGAACAAG+TGG 0.613864 7.3:+72716462 None:intergenic
GATGAAGCTAACACAAAGGA+TGG 0.614176 7.3:-72715756 MS.gene001921:CDS
GTTAGGCAAGGAATTAGCCA+TGG 0.615783 7.3:-72718142 MS.gene001921:CDS
AAGAAATTGAACAGAGACTG+TGG 0.615867 7.3:+72715590 None:intergenic
GGATCTGATCAGCAGTGTGA+CGG 0.618661 7.3:+72718707 None:intergenic
TATTAGAGAGACCAGCAGGT+TGG 0.619511 7.3:+72717134 None:intergenic
CTTATGGAGCATCACAGTGA+AGG 0.621938 7.3:-72718775 MS.gene001921:CDS
CTTATGGAGCATCACAGTGA+AGG 0.621938 7.3:-72718817 MS.gene001921:CDS
GAGTAGTTTACCATCTAACA+TGG 0.623707 7.3:-72714172 MS.gene001921:CDS
AAATGCTCGACTCAGAGAAG+AGG 0.627653 7.3:-72717817 MS.gene001921:intron
ACACTGCTGATCAGATCCAA+AGG 0.630792 7.3:-72718702 MS.gene001921:CDS
GGACTCATCAGGTTCACTTG+TGG 0.637914 7.3:-72714403 MS.gene001921:CDS
AAACATTTCAACCAAAGTCG+AGG 0.640163 7.3:+72716889 None:intergenic
ACACGGAAATGCAGTTACCT+GGG 0.640174 7.3:+72715041 None:intergenic
CATTCCTGTCATATCGAAGG+AGG 0.654392 7.3:-72716012 MS.gene001921:intron
GAAGAGTCAGCCTAATGGTG+AGG 0.657075 7.3:-72715651 MS.gene001921:CDS
AATTGAACAGAGACTGTGGA+GGG 0.667558 7.3:+72715594 None:intergenic
GATACTACAAGAAAGTTGTG+TGG 0.680749 7.3:-72714424 MS.gene001921:CDS
AATGATAATAATATTCAAGG+AGG 0.684472 7.3:-72714282 MS.gene001921:CDS
CCTTTGTGTTAGCTTCATCG+TGG 0.684526 7.3:+72715760 None:intergenic
TGATTCATCAATAATGAGCG+AGG 0.688237 7.3:-72714367 MS.gene001921:CDS
AGAATGTCTTACCTTAAACA+CGG 0.688574 7.3:+72715024 None:intergenic
AAATTGAACAGAGACTGTGG+AGG 0.694732 7.3:+72715593 None:intergenic
CCACGATGAAGCTAACACAA+AGG 0.721269 7.3:-72715760 MS.gene001921:CDS
AACAACCGGAAGGAAGACGA+TGG 0.725479 7.3:+72716337 None:intergenic
TCACTGTCACACCTTCTACG+AGG 0.754008 7.3:-72717187 MS.gene001921:CDS
CTTTGAATGAGATTACTGTG+AGG 0.784055 7.3:-72715673 MS.gene001921:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CGTATAAATAAATAAATAAA+GGG + chr7.3:72714283-72714302 None:intergenic 10.0%
!! TCGTATAAATAAATAAATAA+AGG + chr7.3:72714284-72714303 None:intergenic 10.0%
!! TTAAAAAAAAAAAGTTTGTA+TGG - chr7.3:72715398-72715417 MS.gene001921:intron 10.0%
!! TTTATTCACAATATTAATAA+TGG + chr7.3:72717453-72717472 None:intergenic 10.0%
!!! ATTTTAGATTTATTTTTGTA+TGG - chr7.3:72716295-72716314 MS.gene001921:intron 10.0%
!!! GTGTTTTTAAAATTATATTA+GGG - chr7.3:72714850-72714869 MS.gene001921:intron 10.0%
!!! TAAAAGAATTTTAGAAATTA+AGG + chr7.3:72715554-72715573 None:intergenic 10.0%
!!! TGTGTTTTTAAAATTATATT+AGG - chr7.3:72714849-72714868 MS.gene001921:intron 10.0%
!!! TTAAATATAGTTTAAAATTG+CGG - chr7.3:72715474-72715493 MS.gene001921:intron 10.0%
!!! TTTAAAAACATTTTTTTTTC+TGG + chr7.3:72715324-72715343 None:intergenic 10.0%
!!! TTTTGAAAATATTTTTTGAA+GGG - chr7.3:72717516-72717535 MS.gene001921:intron 10.0%
!! AATCTAAAAAAACACTATAA+AGG + chr7.3:72716071-72716090 None:intergenic 15.0%
!! ATAAAAAAACAAATAAATGG+AGG + chr7.3:72717912-72717931 None:intergenic 15.0%
!! ATTTATGTGGTAAATTAAAA+TGG - chr7.3:72715637-72715656 MS.gene001921:CDS 15.0%
!! CAAAATGATAATAATATTCA+AGG - chr7.3:72718624-72718643 MS.gene001921:intron 15.0%
!! TCAAAAAATAGCAATAATAA+TGG + chr7.3:72717482-72717501 None:intergenic 15.0%
!! TTATTTATTCCCAATATTAA+TGG + chr7.3:72717427-72717446 None:intergenic 15.0%
!!! AGATTGTGAATTAATTTTAT+AGG - chr7.3:72715433-72715452 MS.gene001921:intron 15.0%
!!! ATGAAAATTTTCTGTTTTTA+TGG + chr7.3:72718388-72718407 None:intergenic 15.0%
!!! ATTTTAATTTATAGGTTACT+TGG - chr7.3:72716727-72716746 MS.gene001921:CDS 15.0%
!!! CTTGGTATATTTTAATTTAT+AGG - chr7.3:72716719-72716738 MS.gene001921:CDS 15.0%
!!! GTTTTGAAAATATTTTTTGA+AGG - chr7.3:72717515-72717534 MS.gene001921:intron 15.0%
!!! TAAAAACAGAAAATTTTCAT+CGG - chr7.3:72718388-72718407 MS.gene001921:intron 15.0%
!!! TATTATTGCTATTTTTTGAA+GGG - chr7.3:72717483-72717502 MS.gene001921:intron 15.0%
!!! TTATTATTGCTATTTTTTGA+AGG - chr7.3:72717482-72717501 MS.gene001921:intron 15.0%
!! AAATCTAAACTAACATTCTA+AGG + chr7.3:72715265-72715284 None:intergenic 20.0%
!! AATATTAATGGCTTAATCTA+AGG + chr7.3:72717415-72717434 None:intergenic 20.0%
!! AATGATAATAATATTCAAGG+AGG - chr7.3:72718627-72718646 MS.gene001921:intron 20.0%
!! ATATTAATGGCTTAATCTAA+GGG + chr7.3:72717414-72717433 None:intergenic 20.0%
!! CAATTAAAAGTTAATTACCT+TGG + chr7.3:72716625-72716644 None:intergenic 20.0%
!! TAGATTAAGCCATTAATATT+GGG - chr7.3:72717415-72717434 MS.gene001921:intron 20.0%
!! TATAGAAATGTTATCAATAG+TGG - chr7.3:72716795-72716814 MS.gene001921:intron 20.0%
!! TATTTATTTATACGACACTT+AGG - chr7.3:72714289-72714308 MS.gene001921:CDS 20.0%
!! TTAGATTAAGCCATTAATAT+TGG - chr7.3:72717414-72717433 MS.gene001921:intron 20.0%
!! TTTGTTAATCTGCAAATATA+GGG - chr7.3:72718435-72718454 MS.gene001921:intron 20.0%
!!! ACTATAAAATCTCATTTTGT+TGG - chr7.3:72716648-72716667 MS.gene001921:intron 20.0%
!!! AGATTTTGTAGTTTTCTTTT+TGG - chr7.3:72715279-72715298 MS.gene001921:intron 20.0%
!!! ATAGTTTTAAATTGTAGTTG+CGG - chr7.3:72716934-72716953 MS.gene001921:CDS 20.0%
!!! ATTTTGCTTTTATTGAAACT+TGG + chr7.3:72715367-72715386 None:intergenic 20.0%
!!! GATTTTGTAGTTTTCTTTTT+GGG - chr7.3:72715280-72715299 MS.gene001921:intron 20.0%
!!! TAAAACATGCACAATTTTAA+TGG - chr7.3:72715176-72715195 MS.gene001921:intron 20.0%
!!! TCACAATATAAATGTTTTAG+AGG - chr7.3:72716957-72716976 MS.gene001921:CDS 20.0%
!!! TGTTGTATTTTGTATTTATG+TGG - chr7.3:72715624-72715643 MS.gene001921:CDS 20.0%
!!! TTAGAAAAACTCTTTTTTGT+CGG + chr7.3:72718162-72718181 None:intergenic 20.0%
!!! TTTTGTTAATCTGCAAATAT+AGG - chr7.3:72718434-72718453 MS.gene001921:intron 20.0%
! AAATACAACACATGTAAACA+TGG + chr7.3:72715614-72715633 None:intergenic 25.0%
! AACCAAAATTTGATCTTAGT+AGG + chr7.3:72714795-72714814 None:intergenic 25.0%
! AGGAAGTAAAATTCTCTAAT+AGG + chr7.3:72716459-72716478 None:intergenic 25.0%
! GAAATACCTTAGAGTTAAAA+AGG - chr7.3:72717745-72717764 MS.gene001921:intron 25.0%
! TAAACAATTTGAGAAAGGAT+GGG - chr7.3:72716488-72716507 MS.gene001921:CDS 25.0%
! TAAGGATAATACAATAAGCA+AGG + chr7.3:72717677-72717696 None:intergenic 25.0%
! TACTGTAAACAATTTGAGAA+AGG - chr7.3:72716483-72716502 MS.gene001921:CDS 25.0%
! TTGTAGTTAAAATGTTGTTG+CGG - chr7.3:72715525-72715544 MS.gene001921:intron 25.0%
!! ACATAATTCTTTTGCATTAG+TGG + chr7.3:72715141-72715160 None:intergenic 25.0%
!! AGAAAATTTTCATCGGATTT+TGG - chr7.3:72718395-72718414 MS.gene001921:intron 25.0%
!! ATCCTACTAAGATCAAATTT+TGG - chr7.3:72714790-72714809 MS.gene001921:intron 25.0%
!! GAGTTCACAAATTTTAAATG+TGG + chr7.3:72718345-72718364 None:intergenic 25.0%
!! GCTGCAAATAACATTTTTAA+GGG + chr7.3:72715043-72715062 None:intergenic 25.0%
!! TGCTGCAAATAACATTTTTA+AGG + chr7.3:72715044-72715063 None:intergenic 25.0%
!!! AATTTTGGTTTCAGAATAGA+AGG - chr7.3:72714805-72714824 MS.gene001921:intron 25.0%
!!! ACATTGTTTTATAGGTTTCA+AGG + chr7.3:72715919-72715938 None:intergenic 25.0%
!!! AGAAAACCTTTTTAACTCTA+AGG + chr7.3:72717754-72717773 None:intergenic 25.0%
!!! CTATTTGTTTTTGACACTTT+TGG - chr7.3:72714491-72714510 MS.gene001921:intron 25.0%
!!! GTAAACATGGTTTTAAATTG+CGG + chr7.3:72715601-72715620 None:intergenic 25.0%
!!! GTGTTTGATTTTATCCATAA+AGG + chr7.3:72715875-72715894 None:intergenic 25.0%
!!! TAGATAGAGAGACTTATTTT+AGG + chr7.3:72718009-72718028 None:intergenic 25.0%
!!! TTTTATTGAAACTTGGTAGT+TGG + chr7.3:72715360-72715379 None:intergenic 25.0%
!!! TTTTTTTTCTGGTACAAAAG+AGG + chr7.3:72715313-72715332 None:intergenic 25.0%
AAATGGTATAAGGTCCTAAA+TGG + chr7.3:72718210-72718229 None:intergenic 30.0%
AAGAGAATATTGTGCATGTA+TGG + chr7.3:72715217-72715236 None:intergenic 30.0%
AAGGAAAAATCACTCATGTT+TGG - chr7.3:72715797-72715816 MS.gene001921:intron 30.0%
AAGGAATAAGAAGTTCTTAC+AGG + chr7.3:72716052-72716071 None:intergenic 30.0%
AATGTTGTGTTTACGAAGAT+TGG - chr7.3:72714569-72714588 MS.gene001921:intron 30.0%
AATTCTCTAATAGGAACAAG+TGG + chr7.3:72716450-72716469 None:intergenic 30.0%
AGAATGTCTTACCTTAAACA+CGG + chr7.3:72717888-72717907 None:intergenic 30.0%
ATGTTGTGTTTACGAAGATT+GGG - chr7.3:72714570-72714589 MS.gene001921:intron 30.0%
ATTCAATGTGCAAGAGAAAT+TGG + chr7.3:72716373-72716392 None:intergenic 30.0%
ATTTCCAACTATTGTGACAA+TGG - chr7.3:72716168-72716187 MS.gene001921:CDS 30.0%
CAAATTGTTTACAGTAACGT+AGG + chr7.3:72716479-72716498 None:intergenic 30.0%
CAATGTTATGATATACGGAT+GGG - chr7.3:72714316-72714335 MS.gene001921:CDS 30.0%
CATATCCTGATGAAAAACAA+AGG - chr7.3:72714739-72714758 MS.gene001921:intron 30.0%
CATTCTCTTCTATGAGTATA+CGG + chr7.3:72714984-72715003 None:intergenic 30.0%
CCAATAAGTCCATTAACAAT+TGG + chr7.3:72718771-72718790 None:intergenic 30.0%
CTATAAAACAATGTTCCCTA+GGG - chr7.3:72715925-72715944 MS.gene001921:intron 30.0%
CTCATTATTGATGAATCAAC+AGG + chr7.3:72718540-72718559 None:intergenic 30.0%
GACAGTTGCATTTCAAATTA+TGG - chr7.3:72718713-72718732 MS.gene001921:CDS 30.0%
GACTTTGGTTGAAATGTTTA+TGG - chr7.3:72716024-72716043 MS.gene001921:CDS 30.0%
GAGTTACTCTAAATGGTATA+AGG + chr7.3:72718220-72718239 None:intergenic 30.0%
GATAATACAATAAGCAAGGA+TGG + chr7.3:72717673-72717692 None:intergenic 30.0%
GATTTCACAATGATTCTTTG+TGG - chr7.3:72714915-72714934 MS.gene001921:intron 30.0%
GCATGCAATGTTATGATATA+CGG - chr7.3:72714311-72714330 MS.gene001921:CDS 30.0%
GGTAGTAATTGAATGTATGA+AGG + chr7.3:72718573-72718592 None:intergenic 30.0%
GTAAACAATTTGAGAAAGGA+TGG - chr7.3:72716487-72716506 MS.gene001921:CDS 30.0%
TACATTCAATTACTACCATC+AGG - chr7.3:72718576-72718595 MS.gene001921:intron 30.0%
TCTGTTAGAGTTACTCTAAA+TGG + chr7.3:72718227-72718246 None:intergenic 30.0%
TGGATAAAATCAAACACTGA+TGG - chr7.3:72715878-72715897 MS.gene001921:intron 30.0%
TTAACTGATTATTAGCCCTA+GGG + chr7.3:72715943-72715962 None:intergenic 30.0%
TTATGGTTTAAGTAGTCTAG+TGG + chr7.3:72718371-72718390 None:intergenic 30.0%
TTCTATAGAGCATATGAACT+GGG + chr7.3:72716782-72716801 None:intergenic 30.0%
TTGTAATGTAACCACAATTG+TGG - chr7.3:72716983-72717002 MS.gene001921:CDS 30.0%
TTTAACTGATTATTAGCCCT+AGG + chr7.3:72715944-72715963 None:intergenic 30.0%
TTTCTATAGAGCATATGAAC+TGG + chr7.3:72716783-72716802 None:intergenic 30.0%
TTTCTTCTGATACTCATAAG+AGG - chr7.3:72714162-72714181 MS.gene001921:CDS 30.0%
! ACAATGATTCTTTGTGGTTT+TGG - chr7.3:72714921-72714940 MS.gene001921:intron 30.0%
! ATATCTTCGTTCAGTTGATA+AGG + chr7.3:72717695-72717714 None:intergenic 30.0%
! ATTACCTTGGATTTTCCATT+AGG + chr7.3:72716612-72716631 None:intergenic 30.0%
! ATTTTCCATTAGGCATGTTT+TGG + chr7.3:72716602-72716621 None:intergenic 30.0%
! TCAAAGCAACTTTTATGTGT+TGG + chr7.3:72718803-72718822 None:intergenic 30.0%
! TGTTTCTTCTAAGAGACTTA+TGG - chr7.3:72714118-72714137 MS.gene001921:CDS 30.0%
!! CCAATTGTTAATGGACTTAT+TGG - chr7.3:72718768-72718787 MS.gene001921:CDS 30.0%
!! CTCATTCAAAGTTGATATTG+TGG + chr7.3:72717227-72717246 None:intergenic 30.0%
!! GATTGATTTTGTAGAACAAG+TGG - chr7.3:72716137-72716156 MS.gene001921:CDS 30.0%
!! TTTGTGTGTGTTTTAGACAT+GGG - chr7.3:72714874-72714893 MS.gene001921:intron 30.0%
AAACATTTCAACCAAAGTCG+AGG + chr7.3:72716023-72716042 None:intergenic 35.0%
AACAATGATCCTCCAATGTT+TGG + chr7.3:72718693-72718712 None:intergenic 35.0%
AAGAAATTGAACAGAGACTG+TGG + chr7.3:72717322-72717341 None:intergenic 35.0%
ACAACAATGTCATGACTCAT+AGG - chr7.3:72714540-72714559 MS.gene001921:intron 35.0%
ACAATGATCCTCCAATGTTT+GGG + chr7.3:72718692-72718711 None:intergenic 35.0%
ACAATTGTGGCTACATTTGT+CGG - chr7.3:72716996-72717015 MS.gene001921:CDS 35.0%
AGTTATATCTTCTCGAACGA+AGG - chr7.3:72716204-72716223 MS.gene001921:intron 35.0%
CAAGGAGGTAATAGTGATAA+TGG - chr7.3:72718642-72718661 MS.gene001921:intron 35.0%
CACTTCAAAGAATGTGTGAA+AGG - chr7.3:72716850-72716869 MS.gene001921:intron 35.0%
CCTATAAAACAATGTTCCCT+AGG - chr7.3:72715924-72715943 MS.gene001921:intron 35.0%
CTCGTTAAAAGAGTCCATTT+AGG - chr7.3:72718193-72718212 MS.gene001921:intron 35.0%
CTCTTGAACATCATTACCAT+TGG + chr7.3:72717822-72717841 None:intergenic 35.0%
CTTCGTAAACACAACATTCA+TGG + chr7.3:72714567-72714586 None:intergenic 35.0%
CTTGATCTAAGTGTGGTTAT+TGG - chr7.3:72717088-72717107 MS.gene001921:CDS 35.0%
CTTGCTTATCTTATGGATTC+AGG - chr7.3:72716873-72716892 MS.gene001921:intron 35.0%
CTTTGAATGAGATTACTGTG+AGG - chr7.3:72717236-72717255 MS.gene001921:intron 35.0%
GAAAAACAAAGGTTGCAGTT+AGG - chr7.3:72714750-72714769 MS.gene001921:intron 35.0%
GACGTTGCATAATATATGCA+GGG - chr7.3:72718287-72718306 MS.gene001921:intron 35.0%
GAGTAGTTTACCATCTAACA+TGG - chr7.3:72718737-72718756 MS.gene001921:CDS 35.0%
GAGTCTGTTCCAATTGTTAA+TGG - chr7.3:72718759-72718778 MS.gene001921:CDS 35.0%
GATACTACAAGAAAGTTGTG+TGG - chr7.3:72718485-72718504 MS.gene001921:intron 35.0%
GATCTGAGAATATAGCTATG+AGG - chr7.3:72715013-72715032 MS.gene001921:intron 35.0%
GCAATGTTATGATATACGGA+TGG - chr7.3:72714315-72714334 MS.gene001921:CDS 35.0%
TAACAATTAAGCCAAGCTCA+CGG + chr7.3:72718265-72718284 None:intergenic 35.0%
TAACTGCATTTCCGTGTTTA+AGG - chr7.3:72717874-72717893 MS.gene001921:CDS 35.0%
TAAGTGCATCTACTACCATT+TGG - chr7.3:72717284-72717303 MS.gene001921:intron 35.0%
TACAATATCAACCGCATCAA+GGG + chr7.3:72715510-72715529 None:intergenic 35.0%
TACTTGGATTGAACATGTTG+AGG - chr7.3:72716743-72716762 MS.gene001921:CDS 35.0%
TAGTCGAATGTACTTTCCAA+TGG - chr7.3:72717803-72717822 MS.gene001921:intron 35.0%
TATTATGAATGCCTCGACTT+TGG - chr7.3:72716009-72716028 MS.gene001921:intron 35.0%
TCAATTTCTTGAACGACGAA+AGG - chr7.3:72717332-72717351 MS.gene001921:intron 35.0%
TCTCACTTGTTCATGTTAAG+AGG + chr7.3:72717632-72717651 None:intergenic 35.0%
TCTTAGTGGTTCTTTGCAAT+TGG - chr7.3:72716231-72716250 MS.gene001921:intron 35.0%
TGAGCTTGGCTTAATTGTTA+GGG - chr7.3:72718265-72718284 MS.gene001921:intron 35.0%
TGATTCATCAATAATGAGCG+AGG - chr7.3:72718542-72718561 MS.gene001921:intron 35.0%
TGCAATTCAAAAAGACCTGA+TGG - chr7.3:72714595-72714614 MS.gene001921:intron 35.0%
TGGAAACTAATGAGCCTTTA+TGG - chr7.3:72715858-72715877 MS.gene001921:intron 35.0%
TGGCTTCTATAGAGTTCAAA+GGG - chr7.3:72714511-72714530 MS.gene001921:intron 35.0%
TTCATCCAAAACATGCCTAA+TGG - chr7.3:72716594-72716613 MS.gene001921:intron 35.0%
TTCATGTCTTGATCTAAGTG+TGG - chr7.3:72717081-72717100 MS.gene001921:CDS 35.0%
TTGGCTTCTATAGAGTTCAA+AGG - chr7.3:72714510-72714529 MS.gene001921:intron 35.0%
TTTGATCTTAGTAGGATCCA+TGG + chr7.3:72714787-72714806 None:intergenic 35.0%
TTTGCCATTGTCACAATAGT+TGG + chr7.3:72716175-72716194 None:intergenic 35.0%
! ATCAATAGTGGAGTTGCATT+TGG - chr7.3:72716807-72716826 MS.gene001921:intron 35.0%
! ATCGAAGCTTCTAGAAAATC+TGG - chr7.3:72715980-72715999 MS.gene001921:intron 35.0%
! CAATGGTAATGATGTTCAAG+AGG - chr7.3:72717820-72717839 MS.gene001921:CDS 35.0%
! GATTTTGTAGAACAAGTGGA+TGG - chr7.3:72716141-72716160 MS.gene001921:CDS 35.0%
! GGTATTTTACCGCAAGATAA+AGG - chr7.3:72717017-72717036 MS.gene001921:CDS 35.0%
! GTTAAGAGGTGTAATTCTGA+TGG + chr7.3:72717618-72717637 None:intergenic 35.0%
! TGAAAGGCTTGCTTATCTTA+TGG - chr7.3:72716866-72716885 MS.gene001921:intron 35.0%
! TTGCATTTGGAGCTGAAAAA+TGG - chr7.3:72716820-72716839 MS.gene001921:intron 35.0%
!! AAGCATTTTTCAGTCACTCT+TGG - chr7.3:72716701-72716720 MS.gene001921:CDS 35.0%
!! CATGTTTTGGATGAAACAAC+CGG + chr7.3:72716589-72716608 None:intergenic 35.0%
!! CCTAGGGAACATTGTTTTAT+AGG + chr7.3:72715927-72715946 None:intergenic 35.0%
!! CTTTGTGTGTGTTTTAGACA+TGG - chr7.3:72714873-72714892 MS.gene001921:intron 35.0%
!!! TGCAACCTTTGTTTTTCATC+AGG + chr7.3:72714747-72714766 None:intergenic 35.0%
AAATTGAACAGAGACTGTGG+AGG + chr7.3:72717319-72717338 None:intergenic 40.0%
AACAATTAAGCCAAGCTCAC+GGG + chr7.3:72718264-72718283 None:intergenic 40.0%
AATTGAACAGAGACTGTGGA+GGG + chr7.3:72717318-72717337 None:intergenic 40.0%
ACAAGCTCAAACCCAAACAT+TGG - chr7.3:72718678-72718697 MS.gene001921:intron 40.0%
AGAACACGCTTTCTCATGTT+TGG + chr7.3:72714450-72714469 None:intergenic 40.0%
AGTACATTCGCTAGTACATG+CGG + chr7.3:72718060-72718079 None:intergenic 40.0%
ATATCTTCTCGAACGAAGGA+TGG - chr7.3:72716208-72716227 MS.gene001921:intron 40.0%
ATGCATCAGCTAGTCATAGA+TGG - chr7.3:72717200-72717219 MS.gene001921:CDS 40.0%
ATGTATGTGTGGATTTGACC+GGG - chr7.3:72714350-72714369 MS.gene001921:CDS 40.0%
CATGCCTAATGGAAAATCCA+AGG - chr7.3:72716605-72716624 MS.gene001921:intron 40.0%
CATGTATGTGTGGATTTGAC+CGG - chr7.3:72714349-72714368 MS.gene001921:CDS 40.0%
CTACAATATCAACCGCATCA+AGG + chr7.3:72715511-72715530 None:intergenic 40.0%
GAAGCTTCGATGCGAATATT+CGG + chr7.3:72715971-72715990 None:intergenic 40.0%
GAAGTAATTGCGAAACCTGA+TGG + chr7.3:72718594-72718613 None:intergenic 40.0%
GAATAGAAGGACTCAGATGA+AGG - chr7.3:72714818-72714837 MS.gene001921:intron 40.0%
GACAAATGTAGCCACAATTG+TGG + chr7.3:72716997-72717016 None:intergenic 40.0%
GATGAAGCTAACACAAAGGA+TGG - chr7.3:72717153-72717172 MS.gene001921:CDS 40.0%
GGACGTTGCATAATATATGC+AGG - chr7.3:72718286-72718305 MS.gene001921:intron 40.0%
GGTTTAAGTAGTCTAGTGGT+TGG + chr7.3:72718367-72718386 None:intergenic 40.0%
GGTTTCGCAATTACTTCTGA+TGG - chr7.3:72718597-72718616 MS.gene001921:intron 40.0%
GTGAGCTTGGCTTAATTGTT+AGG - chr7.3:72718264-72718283 MS.gene001921:intron 40.0%
GTGTGTGAACCTTTATCTTG+CGG + chr7.3:72717029-72717048 None:intergenic 40.0%
GTTACAAAATGCCCTTGATG+CGG - chr7.3:72715496-72715515 MS.gene001921:intron 40.0%
TACGAGGAAACATGTATGTG+TGG - chr7.3:72714339-72714358 MS.gene001921:CDS 40.0%
TCATGTTTGGCATGTTTGCT+TGG + chr7.3:72714437-72714456 None:intergenic 40.0%
TGAAAATGCAATGCAAGAGC+TGG - chr7.3:72715826-72715845 MS.gene001921:intron 40.0%
TTGATGAACTTCCTCGTAGA+AGG + chr7.3:72715736-72715755 None:intergenic 40.0%
! ATTAGGGGACATGGCTTTTA+CGG - chr7.3:72714389-72714408 MS.gene001921:CDS 40.0%
! CATTTTGCTACGAAATTCCG+AGG - chr7.3:72716549-72716568 MS.gene001921:intron 40.0%
! TTTTACCACTCGTGGGATTA+GGG - chr7.3:72714373-72714392 MS.gene001921:CDS 40.0%
! TTTTGGATGAAACAACCGGA+AGG + chr7.3:72716585-72716604 None:intergenic 40.0%
!! ATTCTAAGGCATGCAAGTGT+CGG + chr7.3:72715251-72715270 None:intergenic 40.0%
AAATGCTCGACTCAGAGAAG+AGG - chr7.3:72715092-72715111 MS.gene001921:CDS 45.0%
AACACGGAAATGCAGTTACC+TGG + chr7.3:72717872-72717891 None:intergenic 45.0%
AATGTTCCTTACCAACCTGC+TGG - chr7.3:72715764-72715783 MS.gene001921:CDS 45.0%
ACAAAGGTTGCAGTTAGGCA+AGG - chr7.3:72714755-72714774 MS.gene001921:intron 45.0%
ACAATTAAGCCAAGCTCACG+GGG + chr7.3:72718263-72718282 None:intergenic 45.0%
ACACGGAAATGCAGTTACCT+GGG + chr7.3:72717871-72717890 None:intergenic 45.0%
ACACTGCTGATCAGATCCAA+AGG - chr7.3:72714207-72714226 MS.gene001921:CDS 45.0%
ACTCTTACGCTTCAAGCCTT+TGG + chr7.3:72714226-72714245 None:intergenic 45.0%
AGCTCAAACCCAAACATTGG+AGG - chr7.3:72718681-72718700 MS.gene001921:intron 45.0%
ATGATATACGGATGGGTACG+AGG - chr7.3:72714323-72714342 MS.gene001921:CDS 45.0%
ATGTGGAGAAGTGAGATGTC+CGG + chr7.3:72718328-72718347 None:intergenic 45.0%
CAGGAATGGGGGAAACAAAA+TGG + chr7.3:72717939-72717958 None:intergenic 45.0%
CATTCCTGTCATATCGAAGG+AGG - chr7.3:72716897-72716916 MS.gene001921:CDS 45.0%
CCACGATGAAGCTAACACAA+AGG - chr7.3:72717149-72717168 MS.gene001921:CDS 45.0%
CGACGAAAGGAAAAGATCTC+AGG - chr7.3:72717345-72717364 MS.gene001921:intron 45.0%
CTCCTTCGATATGACAGGAA+TGG + chr7.3:72716899-72716918 None:intergenic 45.0%
GAAAGTTGTGTGGACTCATC+AGG - chr7.3:72718495-72718514 MS.gene001921:intron 45.0%
GGAACAGACTCCATGTTAGA+TGG + chr7.3:72718750-72718769 None:intergenic 45.0%
GTTAGGCAAGGAATTAGCCA+TGG - chr7.3:72714767-72714786 MS.gene001921:intron 45.0%
TATTAGAGAGACCAGCAGGT+TGG + chr7.3:72715778-72715797 None:intergenic 45.0%
TCAGTGATTCCATCACCTGA+TGG - chr7.3:72717118-72717137 MS.gene001921:CDS 45.0%
TCCTTATTAGAGAGACCAGC+AGG + chr7.3:72715782-72715801 None:intergenic 45.0%
TTCCATCACCTGATGGAAAG+AGG - chr7.3:72717125-72717144 MS.gene001921:CDS 45.0%
TTTACCACTCGTGGGATTAG+GGG - chr7.3:72714374-72714393 MS.gene001921:CDS 45.0%
TTTGTTTCCCCCATTCCTGA+GGG - chr7.3:72717940-72717959 MS.gene001921:CDS 45.0%
! ACCTGCTGGTCTCTCTAATA+AGG - chr7.3:72715778-72715797 MS.gene001921:CDS 45.0%
! AGAGTATCTAGCATTGCAGC+TGG - chr7.3:72715686-72715705 MS.gene001921:CDS 45.0%
! CCTTTGTGTTAGCTTCATCG+TGG + chr7.3:72717152-72717171 None:intergenic 45.0%
! CTTATGGAGCATCACAGTGA+AGG - chr7.3:72714134-72714153 MS.gene001921:CDS 45.0%
! GTTTTACCACTCGTGGGATT+AGG - chr7.3:72714372-72714391 MS.gene001921:CDS 45.0%
!! GCAGGTTGGTAAGGAACATT+TGG + chr7.3:72715764-72715783 None:intergenic 45.0%
!! TTTTGTTTCCCCCATTCCTG+AGG - chr7.3:72717939-72717958 MS.gene001921:CDS 45.0%
!!! GCAAGAGCTGGTTTTGCTTA+TGG - chr7.3:72715838-72715857 MS.gene001921:intron 45.0%
!! TAAATAAAAAAACAAATAAA+TGG + chr7.3:72717915-72717934 None:intergenic 5.0%
!!! ACTTTTTTATTTTATTTTTT+AGG - chr7.3:72714700-72714719 MS.gene001921:intron 5.0%
!!! CTTTTTTATTTTATTTTTTA+GGG - chr7.3:72714701-72714720 MS.gene001921:intron 5.0%
AACAACCGGAAGGAAGACGA+TGG + chr7.3:72716575-72716594 None:intergenic 50.0%
AGCATTGCAGCTGGATACAC+TGG - chr7.3:72715695-72715714 MS.gene001921:CDS 50.0%
AGGGATCAGAGTTCGAATCC+CGG - chr7.3:72718306-72718325 MS.gene001921:intron 50.0%
ATAGCAAATGTTTCGCGCCC+AGG - chr7.3:72717851-72717870 MS.gene001921:CDS 50.0%
ATCCCACGAGTGGTAAAACC+CGG + chr7.3:72714371-72714390 None:intergenic 50.0%
ATCGTGGTCCTCTTTCCATC+AGG + chr7.3:72717136-72717155 None:intergenic 50.0%
CTACGTCACAGTTGAGCTGA+AGG + chr7.3:72717969-72717988 None:intergenic 50.0%
GAAGAGTCAGCCTAATGGTG+AGG - chr7.3:72717258-72717277 MS.gene001921:intron 50.0%
GCTACCTCCTTCGATATGAC+AGG + chr7.3:72716904-72716923 None:intergenic 50.0%
GGACTCATCAGGTTCACTTG+TGG - chr7.3:72718506-72718525 MS.gene001921:intron 50.0%
GGATCTGATCAGCAGTGTGA+CGG + chr7.3:72714205-72714224 None:intergenic 50.0%
GGCCATTCCTGTCATATCGA+AGG - chr7.3:72716894-72716913 MS.gene001921:CDS 50.0%
GTCCTCTTTCCATCAGGTGA+TGG + chr7.3:72717130-72717149 None:intergenic 50.0%
GTGAGGAAGAGTCAGCCTAA+TGG - chr7.3:72717253-72717272 MS.gene001921:intron 50.0%
TCACTGTCACACCTTCTACG+AGG - chr7.3:72715722-72715741 MS.gene001921:CDS 50.0%
TCAGCTCAACTGTGACGTAG+AGG - chr7.3:72717969-72717988 MS.gene001921:intron 50.0%
TGACAACAAGCTGCACCATC+AGG + chr7.3:72714613-72714632 None:intergenic 50.0%
TGTGGAGAAGTGAGATGTCC+GGG + chr7.3:72718327-72718346 None:intergenic 50.0%
! CGAACGAAGGATGGTCTTAG+TGG - chr7.3:72716217-72716236 MS.gene001921:intron 50.0%
AACAGAGACTGTGGAGGGAG+AGG + chr7.3:72717313-72717332 None:intergenic 55.0%
ACTCGTGGGATTAGGGGACA+TGG - chr7.3:72714380-72714399 MS.gene001921:CDS 55.0%
ATGTCCCCTAATCCCACGAG+TGG + chr7.3:72714381-72714400 None:intergenic 55.0%
GCACTTAGCGCCTCACCATT+AGG + chr7.3:72717271-72717290 None:intergenic 55.0%
TGAAGGACGCCCTCAGGAAT+GGG + chr7.3:72717952-72717971 None:intergenic 55.0%
TGGAGGGAGAGGTAGCCAAA+TGG + chr7.3:72717302-72717321 None:intergenic 55.0%
! GACCGGGTTTTACCACTCGT+GGG - chr7.3:72714366-72714385 MS.gene001921:CDS 55.0%
! TGACCGGGTTTTACCACTCG+TGG - chr7.3:72714365-72714384 MS.gene001921:CDS 55.0%
!! GAGAGACCAGCAGGTTGGTA+AGG + chr7.3:72715773-72715792 None:intergenic 55.0%
AAGGACGCCCTCAGGAATGG+GGG + chr7.3:72717950-72717969 None:intergenic 60.0%
CGAGGCCATCGTCTTCCTTC+CGG - chr7.3:72716567-72716586 MS.gene001921:intron 60.0%
CGGAAGGAAGACGATGGCCT+CGG + chr7.3:72716569-72716588 None:intergenic 60.0%
CTGAAGGACGCCCTCAGGAA+TGG + chr7.3:72717953-72717972 None:intergenic 60.0%
GAAGGACGCCCTCAGGAATG+GGG + chr7.3:72717951-72717970 None:intergenic 60.0%
TTGAGCTGAAGGACGCCCTC+AGG + chr7.3:72717958-72717977 None:intergenic 60.0%
TGTCGTCGACCCCGTGAGCT+TGG - chr7.3:72718251-72718270 MS.gene001921:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 72714095 72718836 72714095 ID=MS.gene001921
chr7.3 mRNA 72714095 72718836 72714095 ID=MS.gene001921.t1;Parent=MS.gene001921
chr7.3 exon 72718694 72718836 72718694 ID=MS.gene001921.t1.exon1;Parent=MS.gene001921.t1
chr7.3 CDS 72718694 72718836 72718694 ID=cds.MS.gene001921.t1;Parent=MS.gene001921.t1
chr7.3 exon 72718092 72718209 72718092 ID=MS.gene001921.t1.exon2;Parent=MS.gene001921.t1
chr7.3 CDS 72718092 72718209 72718092 ID=cds.MS.gene001921.t1;Parent=MS.gene001921.t1
chr7.3 exon 72717818 72717973 72717818 ID=MS.gene001921.t1.exon3;Parent=MS.gene001921.t1
chr7.3 CDS 72717818 72717973 72717818 ID=cds.MS.gene001921.t1;Parent=MS.gene001921.t1
chr7.3 exon 72716880 72717251 72716880 ID=MS.gene001921.t1.exon4;Parent=MS.gene001921.t1
chr7.3 CDS 72716880 72717251 72716880 ID=cds.MS.gene001921.t1;Parent=MS.gene001921.t1
chr7.3 exon 72716679 72716780 72716679 ID=MS.gene001921.t1.exon5;Parent=MS.gene001921.t1
chr7.3 CDS 72716679 72716780 72716679 ID=cds.MS.gene001921.t1;Parent=MS.gene001921.t1
chr7.3 exon 72716305 72716511 72716305 ID=MS.gene001921.t1.exon6;Parent=MS.gene001921.t1
chr7.3 CDS 72716305 72716511 72716305 ID=cds.MS.gene001921.t1;Parent=MS.gene001921.t1
chr7.3 exon 72716013 72716190 72716013 ID=MS.gene001921.t1.exon7;Parent=MS.gene001921.t1
chr7.3 CDS 72716013 72716190 72716013 ID=cds.MS.gene001921.t1;Parent=MS.gene001921.t1
chr7.3 exon 72715565 72715809 72715565 ID=MS.gene001921.t1.exon8;Parent=MS.gene001921.t1
chr7.3 CDS 72715565 72715809 72715565 ID=cds.MS.gene001921.t1;Parent=MS.gene001921.t1
chr7.3 exon 72715036 72715125 72715036 ID=MS.gene001921.t1.exon9;Parent=MS.gene001921.t1
chr7.3 CDS 72715036 72715125 72715036 ID=cds.MS.gene001921.t1;Parent=MS.gene001921.t1
chr7.3 exon 72714095 72714475 72714095 ID=MS.gene001921.t1.exon10;Parent=MS.gene001921.t1
chr7.3 CDS 72714095 72714475 72714095 ID=cds.MS.gene001921.t1;Parent=MS.gene001921.t1
Gene Sequence

>MS.gene001921

ATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTAAGAGACTTATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTGATACTCATAAGAGGAAGAAACGTCGTTGCAACCGTCACACTGCTGATCAGATCCAAAGGCTTGAAGCGTAAGAGTTCTATCTCTGTGTTAAAAATCTATTATTTTTGCACCCTTTATTTATTTATTTATACGACACTTAGGCATGCAATGTTATGATATACGGATGGGTACGAGGAAACATGTATGTGTGGATTTGACCGGGTTTTACCACTCGTGGGATTAGGGGACATGGCTTTTACGGTATTACAGACATAAAAGTTGCGCCAAGCAAACATGCCAAACATGAGAAAGCGTGTTCTGATAATCAACATGTTTTTATACTATTTGTTTTTGACACTTTTGGCTTCTATAGAGTTCAAAGGGTCATGCACAACAATGTCATGACTCATAGGTCCATGAATGTTGTGTTTACGAAGATTGGGTTTGCAATTCAAAAAGACCTGATGGTGCAGCTTGTTGTCAGTTTGCGTTCTATTAGTGTGTAATTAATCTATGATATAATAGTTTTTAATATATAATAGTTTATACGACTTTTTTATTTTATTTTTTAGGGTGTTTAAGACATGTTCATATCCTGATGAAAAACAAAGGTTGCAGTTAGGCAAGGAATTAGCCATGGATCCTACTAAGATCAAATTTTGGTTTCAGAATAGAAGGACTCAGATGAAGGTATTTATGTGTGTTTTTAAAATTATATTAGGGCTTTGTGTGTGTTTTAGACATGGGATTATCATATTTATTTGTGATTTCACAATGATTCTTTGTGGTTTTGGTTTGAACAAAACAGACACAACAAGAAAGAGATGATAACCGTATACTCATAGAAGAGAATGATAAAATAAGATCTGAGAATATAGCTATGAGGCAAGCCCTTAAAAATGTTATTTGCAGCACTTGTGATGAACAAAAGTTGAGAATTGAAAATGCTCGACTCAGAGAAGAGGTATGTAAATCATTAGTACAATATCCACTAATGCAAAAGAATTATGTGTATTCATTCTTAATTAAAACATGCACAATTTTAATGGTTAAATATGTTTAGTCCATACATGCACAATATTCTCTTTGATGACATATCCGACACTTGCATGCCTTAGAATGTTAGTTTAGATTTTGTAGTTTTCTTTTTGGGCTTCTGTCCTCTTTTGTACCAGAAAAAAAAATGTTTTTAAATCTTTTAATACTACCAACTACCAAGTTTCAATAAAAGCAAAATAAGTGCTAAAATTAAAAAAAAAAAGTTTGTATGGACTAAACTTTAAAGATTGTGAATTAATTTTATAGGACAACAAAAAAAAAAAAATTAAATATAGTTTAAAATTGCGGTTACAAAATGCCCTTGATGCGGTTGATATTGTAGTTAAAATGTTGTTGCGGAGACCTTAATTTCTAAAATTCTTTTATAATGCTTTTGCTTGTAGTGCACACCGCAATTTAAAACCATGTTTACATGTGTTGTATTTTGTATTTATGTGGTAAATTAAAATGGTGATTTGTGAACTTCTGTAGCTTGTTAGAGTATCTAGCATTGCAGCTGGATACACTGGAAAATCACTGTCACACCTTCTACGAGGAAGTTCATCAACATTACCAAATGTTCCTTACCAACCTGCTGGTCTCTCTAATAAGGAAAAATCACTCATGTTTGGCATTGCTGAAAATGCAATGCAAGAGCTGGTTTTGCTTATGGAAACTAATGAGCCTTTATGGATAAAATCAAACACTGATGGAAGAGATACTCTTAACCTTGAAACCTATAAAACAATGTTCCCTAGGGCTAATAATCAGTTAAAGAATCCGAATATTCGCATCGAAGCTTCTAGAAAATCTGGTGAAGTTATTATGAATGCCTCGACTTTGGTTGAAATGTTTATGGATCCTGTAAGAACTTCTTATTCCTTTATAGTGTTTTTTTAGATTTGAATTCACTAATTCAATTTAGTTAACTTAATTAAGCAAATTTAATGATTGATTTTGTAGAACAAGTGGATGGAGCTATTTCCAACTATTGTGACAATGGCAAAGACTATTGAAGTTATATCTTCTCGAACGAAGGATGGTCTTAGTGGTTCTTTGCAATTGGTATGATTAATTTTTTTTCGTCATTCGATTAGACTAACATTTATTTTAGATTTATTTTTGTATGGTGTTTCTACGTATACACGATGTCACTTAGATTCTAATTTTTCAACATGCATGCCAATTTCTCTTGCACATTGAATTAATTTTCATTCAATAATTTTTTTTAGATGTATGAAGAGTTGCAAGTGCTTTCACCACTTGTTCCTATTAGAGAATTTTACTTCCTACGTTACTGTAAACAATTTGAGAAAGGATGGGCAATAGTTGATGTTTCATATGAATTTCGTCATAACAAACATTTTGCTACGAAATTCCGAGGCCATCGTCTTCCTTCCGGTTGTTTCATCCAAAACATGCCTAATGGAAAATCCAAGGTAATTAACTTTTAATTGAACACTATAAAATCTCATTTTGTTGGACACAATTTATTATTACATTAATATATTTGAAGCATTTTTCAGTCACTCTTGGTATATTTTAATTTATAGGTTACTTGGATTGAACATGTTGAGGTTGAAGACAAAAACCCAGTTCATATGCTCTATAGAAATGTTATCAATAGTGGAGTTGCATTTGGAGCTGAAAAATGGCTCACTACACTTCAAAGAATGTGTGAAAGGCTTGCTTATCTTATGGATTCAGGCCATTCCTGTCATATCGAAGGAGGTAGCTATATAATTTATAGTTTTAAATTGTAGTTGCGGTCACAATATAAATGTTTTAGAGGTCTTTGTAATGTAACCACAATTGTGGCTACATTTGTCGGTATTTTACCGCAAGATAAAGGTTCACACACACATCACATGAATTTCGATCATATATTTAATTTTCATGTCTTGATCTAAGTGTGGTTATTGGAATTTTTTCAGTGATTCCATCACCTGATGGAAAGAGGACCACGATGAAGCTAACACAAAGGATGGTAACTAATTTCTGTGAAAGTATAAATGCATCAGCTAGTCATAGATGGACCACAATATCAACTTTGAATGAGATTACTGTGAGGAAGAGTCAGCCTAATGGTGAGGCGCTAAGTGCATCTACTACCATTTGGCTACCTCTCCCTCCACAGTCTCTGTTCAATTTCTTGAACGACGAAAGGAAAAGATCTCAGGTTTGTTAAATACTTTATCAATATACGCTATTATTCAAAATATACCCTTAGATTAAGCCATTAATATTGGGAATAAATAATGACCATTATTAATATTGTGAATAAATAATGACCATTATTATTGCTATTTTTTGAAGGGAGATTTTTTGTTTTGAAAATATTTTTTGAAGGGAGTTAGTAAGCGTGTTTTTTTTTTTTTTACATTAAATTAAACAAAAATAAATGTTTACTATATATATATTTTTTAGCCATCAGAATTACACCTCTTAACATGAACAAGTGAGAATTTATGAGTTCGAACTTCCATCCTTGCTTATTGTATTATCCTTATCAACTGAACGAAGATATAATATGATTAGTATTTATTTGATGTTATATGAAATACCTTAGAGTTAAAAAGGTTTTCTTATTAACATTATTTTTCAATGTTGTTGTTTAGTCGAATGTACTTTCCAATGGTAATGATGTTCAAGAGGTTGTTCATATAGCAAATGTTTCGCGCCCAGGTAACTGCATTTCCGTGTTTAAGGTAAGACATTCTTCCTCCATTTATTTGTTTTTTTATTTATCCATTTTGTTTCCCCCATTCCTGAGGGCGTCCTTCAGCTCAACTGTGACGTAGAGGTCACAAGTTCAGATCCTAAAATAAGTCTCTCTATCTAATAGTCTCTATATCTACAAAAGTAAGAACCGCATGTACTAGCGAATGTACTAGCGACCCATTTTCAATAGAAACAACTAAAAATAGCTTCTCATTTGAAATATTTTTGAGATTTTGTTTCAAGAGAAGCTCCGACAAAAAAGAGTTTTTCTAATATCGATCGATCTCGTTAAAAGAGTCCATTTAGGACCTTATACCATTTAGAGTAACTCTAACAGACAAATGTCGTCGACCCCGTGAGCTTGGCTTAATTGTTAGGGACGTTGCATAATATATGCAGGGATCAGAGTTCGAATCCCGGACATCTCACTTCTCCACATTTAAAATTTGTGAACTCCAACCACTAGACTACTTAAACCATAAAAACAGAAAATTTTCATCGGATTTTGGTTTTGTTTCTAATGTATTTTGTTAATCTGCAAATATAGGGTTTCAACACAAGTAACAACAACATGTTGATACTACAAGAAAGTTGTGTGGACTCATCAGGTTCACTTGTGGTGTCTTGTCCTGTTGATTCATCAATAATGAGCGAGGTAGATCCTTCATACATTCAATTACTACCATCAGGTTTCGCAATTACTTCTGATGGAAAGCAAAATGATAATAATATTCAAGGAGGTAATAGTGATAATGGTGATGTTGCATCAACAAGCTCAAACCCAAACATTGGAGGATCATTGTTGACAGTTGCATTTCAAATTATGGTGAGTAGTTTACCATCTAACATGGAGTCTGTTCCAATTGTTAATGGACTTATTGGTAAGACTGTCCAACACATAAAAGTTGCTTTGAATTGTCCTATGTAG
Protein sequence

>MS.gene001921.t1

MEHHSEGSVSSKRLMEHHSEGSVSSDTHKRKKRRCNRHTADQIQRLEAVFKTCSYPDEKQRLQLGKELAMDPTKIKFWFQNRRTQMKTQQERDDNRILIEENDKIRSENIAMRQALKNVICSTCDEQKLRIENARLREELVRVSSIAAGYTGKSLSHLLRGSSSTLPNVPYQPAGLSNKEKSLMFGIAENAMQELVLLMETNEPLWIKSNTDGRDTLNLETYKTMFPRANNQLKNPNIRIEASRKSGEVIMNASTLVEMFMDPNKWMELFPTIVTMAKTIEVISSRTKDGLSGSLQLMYEELQVLSPLVPIREFYFLRYCKQFEKGWAIVDVSYEFRHNKHFATKFRGHRLPSGCFIQNMPNGKSKVTWIEHVEVEDKNPVHMLYRNVINSGVAFGAEKWLTTLQRMCERLAYLMDSGHSCHIEGVIPSPDGKRTTMKLTQRMVTNFCESINASASHRWTTISTLNEITVRKSQPNGEALSASTTIWLPLPPQSLFNFLNDERKRSQSNVLSNGNDVQEVVHIANVSRPGNCISVFKGFNTSNNNMLILQESCVDSSGSLVVSCPVDSSIMSEVDPSYIQLLPSGFAITSDGKQNDNNIQGGNSDNGDVASTSSNPNIGGSLLTVAFQIMVSSLPSNMESVPIVNGLIGKTVQHIKVALNCPM