Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002004.t1 | ABE91851.1 | 98.7 | 626 | 8 | 0 | 1 | 626 | 66 | 691 | 0.00E+00 | 1272.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002004.t1 | Q9SY66 | 80.1 | 622 | 124 | 0 | 1 | 622 | 53 | 674 | 3.4e-309 | 1061.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002004.t1 | Q1SKU8 | 98.7 | 626 | 8 | 0 | 1 | 626 | 66 | 691 | 0.0e+00 | 1272.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene002004.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002004.t1 | MTR_4g035820 | 42.517 | 294 | 158 | 5 | 1 | 291 | 80 | 365 | 1.43e-64 | 225 |
MS.gene002004.t1 | MTR_4g035820 | 45.361 | 97 | 53 | 0 | 378 | 474 | 325 | 421 | 2.47e-20 | 95.9 |
MS.gene002004.t1 | MTR_3g450850 | 42.373 | 236 | 129 | 2 | 1 | 230 | 52 | 286 | 1.56e-61 | 208 |
MS.gene002004.t1 | MTR_3g012160 | 49.462 | 93 | 47 | 0 | 139 | 231 | 1 | 93 | 1.98e-28 | 109 |
MS.gene002004.t1 | MTR_6g051425 | 29.151 | 271 | 185 | 4 | 4 | 271 | 25 | 291 | 6.87e-28 | 115 |
MS.gene002004.t1 | MTR_6g014355 | 39.344 | 122 | 72 | 1 | 63 | 182 | 5 | 126 | 2.52e-21 | 94.0 |
MS.gene002004.t1 | MTR_1g070355 | 27.778 | 234 | 158 | 7 | 2 | 232 | 80 | 305 | 6.54e-20 | 94.0 |
MS.gene002004.t1 | MTR_6g022080 | 33.333 | 129 | 79 | 4 | 7 | 133 | 96 | 219 | 1.26e-14 | 74.7 |
MS.gene002004.t1 | MTR_0402s0040 | 32.353 | 170 | 105 | 6 | 2 | 169 | 32 | 193 | 1.34e-13 | 73.9 |
MS.gene002004.t1 | MTR_7g446520 | 24.231 | 260 | 174 | 4 | 2 | 260 | 94 | 331 | 1.38e-12 | 69.7 |
MS.gene002004.t1 | MTR_5g076070 | 24.255 | 235 | 161 | 8 | 2 | 230 | 59 | 282 | 5.69e-12 | 67.4 |
MS.gene002004.t1 | MTR_0853s0010 | 29.710 | 138 | 81 | 4 | 2 | 133 | 31 | 158 | 4.54e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002004.t1 | AT1G10240 | 80.064 | 622 | 124 | 0 | 1 | 622 | 53 | 674 | 0.0 | 1092 |
MS.gene002004.t1 | AT1G10240 | 80.064 | 622 | 124 | 0 | 1 | 622 | 53 | 674 | 0.0 | 1092 |
MS.gene002004.t1 | AT5G28530 | 42.097 | 620 | 342 | 6 | 1 | 608 | 60 | 674 | 1.09e-171 | 505 |
MS.gene002004.t1 | AT5G28530 | 42.097 | 620 | 338 | 6 | 1 | 608 | 60 | 670 | 3.55e-171 | 503 |
MS.gene002004.t1 | AT5G28530 | 42.097 | 620 | 338 | 6 | 1 | 608 | 60 | 670 | 3.55e-171 | 503 |
MS.gene002004.t1 | AT5G28530 | 38.361 | 610 | 316 | 8 | 1 | 608 | 60 | 611 | 1.35e-136 | 413 |
MS.gene002004.t1 | AT5G28530 | 38.361 | 610 | 312 | 8 | 1 | 608 | 60 | 607 | 1.44e-136 | 412 |
MS.gene002004.t1 | AT4G38180 | 30.732 | 615 | 397 | 13 | 2 | 597 | 79 | 683 | 9.03e-81 | 271 |
MS.gene002004.t1 | AT4G15090 | 29.316 | 614 | 397 | 14 | 2 | 596 | 57 | 652 | 1.03e-75 | 258 |
MS.gene002004.t1 | AT4G15090 | 29.316 | 614 | 397 | 14 | 2 | 596 | 57 | 652 | 1.03e-75 | 258 |
MS.gene002004.t1 | AT4G15090 | 29.316 | 614 | 397 | 14 | 2 | 596 | 57 | 652 | 1.03e-75 | 258 |
MS.gene002004.t1 | AT4G15090 | 29.316 | 614 | 397 | 14 | 2 | 596 | 57 | 652 | 1.03e-75 | 258 |
MS.gene002004.t1 | AT4G15090 | 29.316 | 614 | 397 | 14 | 2 | 596 | 57 | 652 | 1.03e-75 | 258 |
MS.gene002004.t1 | AT1G76320 | 26.634 | 612 | 405 | 14 | 2 | 596 | 3 | 587 | 9.42e-62 | 217 |
MS.gene002004.t1 | AT1G76320 | 26.634 | 612 | 405 | 14 | 2 | 596 | 3 | 587 | 2.74e-61 | 217 |
MS.gene002004.t1 | AT1G76320 | 26.634 | 612 | 405 | 14 | 2 | 596 | 3 | 587 | 3.31e-61 | 217 |
MS.gene002004.t1 | AT1G76320 | 26.634 | 612 | 405 | 14 | 2 | 596 | 3 | 587 | 3.31e-61 | 217 |
MS.gene002004.t1 | AT3G22170 | 25.127 | 589 | 354 | 17 | 2 | 552 | 76 | 615 | 2.13e-55 | 202 |
MS.gene002004.t1 | AT3G22170 | 25.127 | 589 | 354 | 17 | 2 | 552 | 76 | 615 | 2.13e-55 | 202 |
MS.gene002004.t1 | AT2G27110 | 25.884 | 622 | 401 | 17 | 2 | 609 | 55 | 630 | 2.13e-52 | 193 |
MS.gene002004.t1 | AT2G27110 | 25.884 | 622 | 401 | 17 | 2 | 609 | 55 | 630 | 2.13e-52 | 193 |
MS.gene002004.t1 | AT3G06250 | 26.445 | 571 | 335 | 16 | 2 | 552 | 196 | 701 | 4.41e-50 | 186 |
MS.gene002004.t1 | AT3G06250 | 26.445 | 571 | 335 | 16 | 2 | 552 | 196 | 701 | 4.41e-50 | 186 |
MS.gene002004.t1 | AT3G06250 | 26.445 | 571 | 335 | 16 | 2 | 552 | 196 | 701 | 4.41e-50 | 186 |
MS.gene002004.t1 | AT1G52520 | 26.289 | 582 | 361 | 18 | 2 | 552 | 91 | 635 | 7.09e-49 | 182 |
MS.gene002004.t1 | AT5G18960 | 26.620 | 571 | 337 | 18 | 2 | 552 | 217 | 725 | 2.86e-48 | 181 |
MS.gene002004.t1 | AT5G18960 | 26.620 | 571 | 337 | 18 | 2 | 552 | 217 | 725 | 2.86e-48 | 181 |
MS.gene002004.t1 | AT4G19990 | 25.920 | 598 | 357 | 15 | 2 | 567 | 27 | 570 | 1.33e-47 | 179 |
MS.gene002004.t1 | AT4G19990 | 25.920 | 598 | 357 | 15 | 2 | 567 | 27 | 570 | 1.33e-47 | 179 |
MS.gene002004.t1 | AT4G19990 | 25.920 | 598 | 357 | 15 | 2 | 567 | 27 | 570 | 1.78e-47 | 178 |
MS.gene002004.t1 | AT4G19990 | 25.920 | 598 | 357 | 15 | 2 | 567 | 41 | 584 | 2.43e-47 | 178 |
MS.gene002004.t1 | AT4G19990 | 26.087 | 598 | 356 | 15 | 2 | 567 | 27 | 570 | 3.06e-47 | 178 |
MS.gene002004.t1 | AT4G19990 | 26.087 | 598 | 356 | 15 | 2 | 567 | 27 | 570 | 3.06e-47 | 178 |
MS.gene002004.t1 | AT2G27110 | 27.802 | 464 | 295 | 11 | 158 | 609 | 50 | 485 | 5.08e-47 | 176 |
MS.gene002004.t1 | AT1G80010 | 26.962 | 586 | 365 | 17 | 2 | 552 | 101 | 658 | 2.18e-45 | 172 |
MS.gene002004.t1 | AT4G38170 | 27.493 | 371 | 257 | 5 | 189 | 552 | 31 | 396 | 5.87e-43 | 162 |
MS.gene002004.t1 | AT4G19990 | 25.906 | 552 | 334 | 13 | 43 | 567 | 10 | 513 | 6.40e-43 | 164 |
MS.gene002004.t1 | AT2G32250 | 21.403 | 556 | 383 | 11 | 2 | 552 | 44 | 550 | 3.39e-42 | 163 |
MS.gene002004.t1 | AT2G32250 | 21.569 | 561 | 376 | 12 | 2 | 552 | 3 | 509 | 5.18e-42 | 162 |
MS.gene002004.t1 | AT2G32250 | 22.202 | 563 | 370 | 13 | 2 | 552 | 3 | 509 | 5.28e-42 | 162 |
MS.gene002004.t1 | AT2G32250 | 21.569 | 561 | 376 | 12 | 2 | 552 | 44 | 550 | 6.46e-42 | 162 |
MS.gene002004.t1 | AT2G32250 | 21.569 | 561 | 376 | 12 | 2 | 552 | 44 | 550 | 6.46e-42 | 162 |
MS.gene002004.t1 | AT2G32250 | 21.569 | 561 | 376 | 12 | 2 | 552 | 44 | 550 | 6.46e-42 | 162 |
MS.gene002004.t1 | AT2G32250 | 22.359 | 568 | 363 | 14 | 2 | 552 | 44 | 550 | 6.70e-42 | 162 |
MS.gene002004.t1 | AT2G32250 | 22.359 | 568 | 363 | 14 | 2 | 552 | 44 | 550 | 6.70e-42 | 162 |
Find 128 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTATTGATTAACAACCTTTA+TGG | 0.138871 | 2.3:-76255970 | None:intergenic |
AGGGAGATGGTCTGTTCTTT+TGG | 0.145904 | 2.3:+76256772 | MS.gene002004:CDS |
ATAAGCAAAACCACTGAATT+TGG | 0.147239 | 2.3:+76255387 | MS.gene002004:CDS |
CCTTCTTGGTAGGCTTTCTT+AGG | 0.189142 | 2.3:+76256517 | MS.gene002004:intron |
TTGACATGCCGCTGGGGATA+TGG | 0.190733 | 2.3:+76255865 | MS.gene002004:CDS |
TTAGAGATGAAACCATATTT+TGG | 0.193583 | 2.3:-76257679 | None:intergenic |
GTGTACTCAAATTTAAAATT+AGG | 0.227389 | 2.3:-76255726 | None:intergenic |
TCTTGGTTCAATGCTGTTCT+AGG | 0.230975 | 2.3:+76256670 | MS.gene002004:CDS |
CCACCATAATCATGAACTTT+TGG | 0.234641 | 2.3:+76255443 | MS.gene002004:CDS |
GTTCCAAAAGTTCATGATTA+TGG | 0.235757 | 2.3:-76255446 | None:intergenic |
TATGGAATGCCCTGCTTCTT+TGG | 0.236061 | 2.3:+76255903 | MS.gene002004:CDS |
AGTTAAGCTATTCCAAAATA+TGG | 0.247042 | 2.3:+76257667 | MS.gene002004:CDS |
CTTAGTTTGGGTTGATGATT+TGG | 0.272442 | 2.3:-76255313 | None:intergenic |
CTGGCACATTGTAATGAAAT+TGG | 0.282052 | 2.3:-76257785 | None:intergenic |
ATCCTTATGTTTGCCAAAAC+AGG | 0.285583 | 2.3:+76255528 | MS.gene002004:CDS |
ATGAACAGAAATCCCTGTTT+TGG | 0.290771 | 2.3:-76255541 | None:intergenic |
AAATCTAGGGTTTCTTCTTC+TGG | 0.296205 | 2.3:-76255669 | None:intergenic |
TATTTCGTTGAGGCTTAGTT+TGG | 0.297452 | 2.3:-76255326 | None:intergenic |
TGCACATTCTTAACAAATCT+AGG | 0.298629 | 2.3:-76255683 | None:intergenic |
AAGAATGTGCAGAAATATTA+AGG | 0.303262 | 2.3:+76255695 | MS.gene002004:CDS |
AAACCAGTGACGCGCCATTC+TGG | 0.316021 | 2.3:-76255414 | None:intergenic |
TTGGAATAGCTTAACTCTTT+CGG | 0.327991 | 2.3:-76257660 | None:intergenic |
TAGTCATTCCCGCAAGAAAA+TGG | 0.334474 | 2.3:-76256867 | None:intergenic |
TAGCACACAGCCAAAGAAGC+AGG | 0.342849 | 2.3:-76255913 | None:intergenic |
TCATCAAATGATGAGACTTA+TGG | 0.350578 | 2.3:+76255560 | MS.gene002004:CDS |
AAGGAGGTCGCAGAGTTTAC+TGG | 0.359371 | 2.3:+76257447 | MS.gene002004:CDS |
CAAAACATGCTTTCTGCATA+TGG | 0.375824 | 2.3:+76256626 | MS.gene002004:CDS |
ATATAGCTCGCGCTCACTTT+GGG | 0.386287 | 2.3:+76256825 | MS.gene002004:CDS |
AGAAAATGGCTTCTTAGATA+TGG | 0.389745 | 2.3:-76256853 | None:intergenic |
GGAAGGAATCGAACTTGGTT+TGG | 0.392049 | 2.3:-76255468 | None:intergenic |
TATATAGCTCGCGCTCACTT+TGG | 0.393538 | 2.3:+76256824 | MS.gene002004:CDS |
TGTAGCAGCGTGCGATTCCA+TGG | 0.394182 | 2.3:-76257312 | None:intergenic |
ATCTTCCAGATGTGGTTGTC+AGG | 0.399237 | 2.3:+76255353 | MS.gene002004:CDS |
GCTTGCTCACTTTGTTGAAC+AGG | 0.402511 | 2.3:+76256951 | MS.gene002004:CDS |
CTTGCGGGAATGACTACAAC+TGG | 0.403842 | 2.3:+76256874 | MS.gene002004:CDS |
CACCGAAGATATCATACAAT+TGG | 0.404756 | 2.3:-76255803 | None:intergenic |
GTCTAAAGAACGATTAGATA+TGG | 0.411264 | 2.3:+76257718 | MS.gene002004:CDS |
TAAGCAAAACCACTGAATTT+GGG | 0.413718 | 2.3:+76255388 | MS.gene002004:CDS |
AATAGAGAAGCCGCAGGTCT+TGG | 0.423335 | 2.3:-76255202 | None:intergenic |
CCTCCAGAATGGCGCGTCAC+TGG | 0.424652 | 2.3:+76255411 | MS.gene002004:CDS |
TGGGTTGGGATAAATAATTA+TGG | 0.425124 | 2.3:+76255885 | MS.gene002004:CDS |
CACTGCATTTGACATGCCGC+TGG | 0.431194 | 2.3:+76255857 | MS.gene002004:CDS |
ATAAGCCTGACAACCACATC+TGG | 0.432847 | 2.3:-76255358 | None:intergenic |
CTTGAGAAGTGCGTCGAACC+TGG | 0.435619 | 2.3:+76255585 | MS.gene002004:CDS |
CCAGAGATACTTCTACCATT+AGG | 0.440893 | 2.3:+76257804 | MS.gene002004:CDS |
TCTCTGAGAGTTCTTTCAAC+AGG | 0.443737 | 2.3:+76257539 | MS.gene002004:CDS |
CCTAATGGTAGAAGTATCTC+TGG | 0.445108 | 2.3:-76257804 | None:intergenic |
ATTTCGTTGAGGCTTAGTTT+GGG | 0.449059 | 2.3:-76255325 | None:intergenic |
CGGATGGGAAGATATGCATC+TGG | 0.452008 | 2.3:-76257578 | None:intergenic |
CAAAATGTTAGCCTCAAAAC+AGG | 0.452685 | 2.3:+76257284 | MS.gene002004:CDS |
TGCCGCTGGGGATATGGGTT+GGG | 0.453477 | 2.3:+76255871 | MS.gene002004:CDS |
TGACATGCCGCTGGGGATAT+GGG | 0.454706 | 2.3:+76255866 | MS.gene002004:CDS |
TAGGTGAACGCTACAATGAC+TGG | 0.457850 | 2.3:+76256689 | MS.gene002004:CDS |
GTTTGGGTTGATGATTTGGC+AGG | 0.459466 | 2.3:-76255309 | None:intergenic |
TAAACGGTTGTTTGCATCAA+GGG | 0.461284 | 2.3:-76255748 | None:intergenic |
TACTTTGTTTGTCACCGTGC+TGG | 0.469337 | 2.3:+76255279 | MS.gene002004:CDS |
TAAATTAACAATGTGTCGAT+TGG | 0.471898 | 2.3:-76256803 | None:intergenic |
TCAGTAAAAGGCAAATATCC+AGG | 0.474275 | 2.3:-76255603 | None:intergenic |
ATCCAATTGTATGATATCTT+CGG | 0.477575 | 2.3:+76255801 | MS.gene002004:CDS |
TTGACGACTTTGAACTAGGC+TGG | 0.486705 | 2.3:+76256749 | MS.gene002004:CDS |
TGAAGCTTCGAAAAGGCAAA+AGG | 0.488243 | 2.3:-76257344 | None:intergenic |
GCACATTCTTAACAAATCTA+GGG | 0.488962 | 2.3:-76255682 | None:intergenic |
AAATTCCAGAAAATTCAAAC+TGG | 0.489969 | 2.3:-76257505 | None:intergenic |
GTAGCAGCGTGCGATTCCAT+GGG | 0.490853 | 2.3:-76257311 | None:intergenic |
CAGTCATCATAGATTCCTAA+TGG | 0.491526 | 2.3:-76257819 | None:intergenic |
ACTCTTTCGGCATGATCGCT+AGG | 0.495476 | 2.3:-76257647 | None:intergenic |
CTGAATTTGGGCCTCCAGAA+TGG | 0.496915 | 2.3:+76255400 | MS.gene002004:CDS |
ATCTAATCGTTCTTTAGACT+TGG | 0.498595 | 2.3:-76257714 | None:intergenic |
TCAGTTGACGACTTTGAACT+AGG | 0.498779 | 2.3:+76256745 | MS.gene002004:CDS |
ACTGCATTTGACATGCCGCT+GGG | 0.500632 | 2.3:+76255858 | MS.gene002004:CDS |
ATGCAGGAAGGAATCGAACT+TGG | 0.504851 | 2.3:-76255473 | None:intergenic |
ATTAACAACCTTTATGGCCC+AGG | 0.508147 | 2.3:-76255964 | None:intergenic |
GCTTCAAGAACAACTTGTGT+TGG | 0.510259 | 2.3:+76257361 | MS.gene002004:CDS |
ATGCCGCTGGGGATATGGGT+TGG | 0.515095 | 2.3:+76255870 | MS.gene002004:CDS |
TTGTTCTTGAAGCTTCGAAA+AGG | 0.515435 | 2.3:-76257351 | None:intergenic |
TAGTAGCAAAGTTTCCGTCT+TGG | 0.523045 | 2.3:+76256653 | MS.gene002004:CDS |
ACCGTTTAGAAAATATTGCC+TGG | 0.526747 | 2.3:+76255763 | MS.gene002004:CDS |
CAATTAACGCCTTCATTCAA+CGG | 0.534336 | 2.3:+76256908 | MS.gene002004:CDS |
CTAAACGGTTGTTTGCATCA+AGG | 0.535769 | 2.3:-76255749 | None:intergenic |
ACTGATACGACGCCATCGGA+TGG | 0.541479 | 2.3:-76257594 | None:intergenic |
CTGATACGACGCCATCGGAT+GGG | 0.543366 | 2.3:-76257593 | None:intergenic |
TCTGATATAGTTCTGTATGC+AGG | 0.547078 | 2.3:-76255489 | None:intergenic |
TACTGCAAGATGAAACTGTC+CGG | 0.547112 | 2.3:+76255934 | MS.gene002004:CDS |
TCCTTATGTTTGCCAAAACA+GGG | 0.551056 | 2.3:+76255529 | MS.gene002004:CDS |
GAGACAGAAGAATGGAAACT+TGG | 0.557670 | 2.3:-76257748 | None:intergenic |
TGAACTAGGCTGGAGGGAGA+TGG | 0.559599 | 2.3:+76256759 | MS.gene002004:CDS |
TGATCAGTTAATATAGTCTG+TGG | 0.559623 | 2.3:-76256559 | None:intergenic |
ATCATACAATTGGATGGATG+AGG | 0.563319 | 2.3:-76255793 | None:intergenic |
CAGCTTATAATTCCTTCATG+AGG | 0.566205 | 2.3:-76257473 | None:intergenic |
AGACATCACACAAAAGTTGA+AGG | 0.566338 | 2.3:+76257428 | MS.gene002004:CDS |
TGGCAGGAGTGTTGCCAGCA+CGG | 0.567905 | 2.3:-76255293 | None:intergenic |
CCAAAAGTTCATGATTATGG+TGG | 0.568510 | 2.3:-76255443 | None:intergenic |
GAAGATATCATACAATTGGA+TGG | 0.569457 | 2.3:-76255799 | None:intergenic |
AGCTTATAATTCCTTCATGA+GGG | 0.573229 | 2.3:-76257472 | None:intergenic |
TTCTGGAGGCCCAAATTCAG+TGG | 0.573388 | 2.3:-76255397 | None:intergenic |
TCTTATGCGAGACAGAAGAA+TGG | 0.582203 | 2.3:-76257756 | None:intergenic |
CGACTTTGAACTAGGCTGGA+GGG | 0.582819 | 2.3:+76256753 | MS.gene002004:CDS |
AATAGAAAATCTTCCAGATG+TGG | 0.584217 | 2.3:+76255345 | MS.gene002004:CDS |
GGAAAAGACGGTGTTGGCAA+AGG | 0.584524 | 2.3:+76255243 | MS.gene002004:CDS |
ACTTAGAAACCGTTGAATGA+AGG | 0.586482 | 2.3:-76256917 | None:intergenic |
AAGTTCATGATTATGGTGGT+TGG | 0.589394 | 2.3:-76255439 | None:intergenic |
ATGCATATCTTCCCATCCGA+TGG | 0.597365 | 2.3:+76257582 | MS.gene002004:CDS |
AGCACACAGCCAAAGAAGCA+GGG | 0.598142 | 2.3:-76255912 | None:intergenic |
GTTTACTGGTCCCCTCATGA+AGG | 0.604499 | 2.3:+76257461 | MS.gene002004:CDS |
GATGGATGAGGCATACGACC+AGG | 0.609900 | 2.3:-76255781 | None:intergenic |
TAGCAGCGTGCGATTCCATG+GGG | 0.615908 | 2.3:-76257310 | None:intergenic |
CCAGTGACGCGCCATTCTGG+AGG | 0.616513 | 2.3:-76255411 | None:intergenic |
TGATATCTTCGGTGATGCTG+TGG | 0.618259 | 2.3:+76255812 | MS.gene002004:CDS |
ACCGAAGGAAAAGACGGTGT+TGG | 0.619616 | 2.3:+76255237 | MS.gene002004:CDS |
GCACACTGATACGACGCCAT+CGG | 0.621865 | 2.3:-76257598 | None:intergenic |
TTATGGCCCAGGAAAATGAC+CGG | 0.623189 | 2.3:-76255953 | None:intergenic |
CTGCATTTGACATGCCGCTG+GGG | 0.625737 | 2.3:+76255859 | MS.gene002004:CDS |
GGATGGGAAGATATGCATCT+GGG | 0.625859 | 2.3:-76257577 | None:intergenic |
ATTAGACGTCATCGTACCGA+AGG | 0.626176 | 2.3:+76255222 | MS.gene002004:CDS |
TCATAAGCAGCATCGTGAGT+GGG | 0.627606 | 2.3:-76255162 | None:intergenic |
GGTTTCTAAGTGCACAGACA+CGG | 0.627911 | 2.3:+76256929 | MS.gene002004:CDS |
GTCATAAGCAGCATCGTGAG+TGG | 0.636238 | 2.3:-76255163 | None:intergenic |
TCGAAAAGGCAAAAGGAGTG+AGG | 0.638942 | 2.3:-76257337 | None:intergenic |
GCTTATAATTCCTTCATGAG+GGG | 0.641658 | 2.3:-76257471 | None:intergenic |
ACGTCTAATAGAGAAGCCGC+AGG | 0.646866 | 2.3:-76255208 | None:intergenic |
ACGACTTTGAACTAGGCTGG+AGG | 0.648729 | 2.3:+76256752 | MS.gene002004:CDS |
TGAACGCTACAATGACTGGA+AGG | 0.649833 | 2.3:+76256693 | MS.gene002004:CDS |
ATATAGTTCTGTATGCAGGA+AGG | 0.660408 | 2.3:-76255485 | None:intergenic |
AGAACAGCATTGAACCAAGA+CGG | 0.662125 | 2.3:-76256667 | None:intergenic |
CATCGTACCGAAGGAAAAGA+CGG | 0.676411 | 2.3:+76255231 | MS.gene002004:CDS |
ATCCCAACCCATATCCCCAG+CGG | 0.701870 | 2.3:-76255873 | None:intergenic |
CATCACACAAAAGTTGAAGG+AGG | 0.714854 | 2.3:+76257431 | MS.gene002004:CDS |
AGCAGCGTGCGATTCCATGG+GGG | 0.727593 | 2.3:-76257309 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATTCCAATTTTATAAAA+TGG | + | chr2.3:76256239-76256258 | MS.gene002004:intron | 10.0% |
!! | AAAATTGGAATAAAAAGAAA+TGG | - | chr2.3:76256233-76256252 | None:intergenic | 15.0% |
!! | AAATTGGAATAAAAAGAAAT+GGG | - | chr2.3:76256232-76256251 | None:intergenic | 15.0% |
!!! | ATGTTTTGATTTTTTTACAT+TGG | + | chr2.3:76256995-76257014 | MS.gene002004:intron | 15.0% |
!!! | ATTCTTTTCTGAAATAATAC+TGG | + | chr2.3:76256049-76256068 | MS.gene002004:intron | 20.0% |
!!! | GTGTACTCAAATTTAAAATT+AGG | - | chr2.3:76255729-76255748 | None:intergenic | 20.0% |
!!! | TTATTGATTAACAACCTTTA+TGG | - | chr2.3:76255973-76255992 | None:intergenic | 20.0% |
! | AAAAAAAACAAACTAGCACA+AGG | - | chr2.3:76256209-76256228 | None:intergenic | 25.0% |
! | AAATTCCAGAAAATTCAAAC+TGG | - | chr2.3:76257508-76257527 | None:intergenic | 25.0% |
! | AAATTTATGAACATTCCACA+AGG | - | chr2.3:76256314-76256333 | None:intergenic | 25.0% |
! | AACCAGTGTAAATTAAAGAA+TGG | - | chr2.3:76256487-76256506 | None:intergenic | 25.0% |
! | AAGAATGTGCAGAAATATTA+AGG | + | chr2.3:76255695-76255714 | MS.gene002004:CDS | 25.0% |
! | AATTTATGAACATTCCACAA+GGG | - | chr2.3:76256313-76256332 | None:intergenic | 25.0% |
! | AGTTAAGCTATTCCAAAATA+TGG | + | chr2.3:76257667-76257686 | MS.gene002004:CDS | 25.0% |
! | ATCCAATTGTATGATATCTT+CGG | + | chr2.3:76255801-76255820 | MS.gene002004:CDS | 25.0% |
! | ATTTAGTATCTCCAAAAAGT+AGG | - | chr2.3:76257161-76257180 | None:intergenic | 25.0% |
! | TATTTCAGAAAAGAATCCAA+GGG | - | chr2.3:76256045-76256064 | None:intergenic | 25.0% |
! | TTATTAGCGTCTATATCATT+TGG | + | chr2.3:76255994-76256013 | MS.gene002004:intron | 25.0% |
! | TTATTTCAGAAAAGAATCCA+AGG | - | chr2.3:76256046-76256065 | None:intergenic | 25.0% |
!! | AACCATTCTTTAATTTACAC+TGG | + | chr2.3:76256482-76256501 | MS.gene002004:intron | 25.0% |
!! | ATATTTGCCTTTTACTGAAA+AGG | + | chr2.3:76255608-76255627 | MS.gene002004:CDS | 25.0% |
!! | CCAATTTTATAAAATGGTGA+AGG | + | chr2.3:76256245-76256264 | MS.gene002004:intron | 25.0% |
!! | CCTTCACCATTTTATAAAAT+TGG | - | chr2.3:76256248-76256267 | None:intergenic | 25.0% |
!! | GATCTAATTTTCTAAATGAC+TGG | - | chr2.3:76255650-76255669 | None:intergenic | 25.0% |
!! | TAAATTAACAATGTGTCGAT+TGG | - | chr2.3:76256806-76256825 | None:intergenic | 25.0% |
!! | TTAGAGATGAAACCATATTT+TGG | - | chr2.3:76257682-76257701 | None:intergenic | 25.0% |
!!! | AATTTTCTGGAATTTTGTGT+AGG | + | chr2.3:76257513-76257532 | MS.gene002004:CDS | 25.0% |
!!! | CTTTCTTAGGTTTTATGAAT+GGG | + | chr2.3:76256530-76256549 | MS.gene002004:CDS | 25.0% |
!!! | GTTGATTTTAAAGATCAAAC+TGG | + | chr2.3:76257233-76257252 | MS.gene002004:CDS | 25.0% |
!!! | TTTTGAAGAATCTTAGAAGA+AGG | - | chr2.3:76257623-76257642 | None:intergenic | 25.0% |
!!! | TTTTGATTCAAATTGTGTTG+TGG | + | chr2.3:76256018-76256037 | MS.gene002004:intron | 25.0% |
AATAGAAAATCTTCCAGATG+TGG | + | chr2.3:76255345-76255364 | MS.gene002004:CDS | 30.0% | |
AGAAAATGGCTTCTTAGATA+TGG | - | chr2.3:76256856-76256875 | None:intergenic | 30.0% | |
AGCTTATAATTCCTTCATGA+GGG | - | chr2.3:76257475-76257494 | None:intergenic | 30.0% | |
ATAAAAAAACTGCACTGTCT+TGG | + | chr2.3:76256124-76256143 | MS.gene002004:intron | 30.0% | |
ATAAGCAAAACCACTGAATT+TGG | + | chr2.3:76255387-76255406 | MS.gene002004:CDS | 30.0% | |
ATCTAATCGTTCTTTAGACT+TGG | - | chr2.3:76257717-76257736 | None:intergenic | 30.0% | |
ATTTCAGAAAAGAATCCAAG+GGG | - | chr2.3:76256044-76256063 | None:intergenic | 30.0% | |
CAATGATCATTCACATTTCA+TGG | + | chr2.3:76257023-76257042 | MS.gene002004:intron | 30.0% | |
CCAAAATTCACAGAAAGATA+AGG | - | chr2.3:76257184-76257203 | None:intergenic | 30.0% | |
GAAGATATCATACAATTGGA+TGG | - | chr2.3:76255802-76255821 | None:intergenic | 30.0% | |
GATTTGTATTAACCTCCATT+TGG | - | chr2.3:76256155-76256174 | None:intergenic | 30.0% | |
GCACATTCTTAACAAATCTA+GGG | - | chr2.3:76255685-76255704 | None:intergenic | 30.0% | |
GGAAAAAAAAAACTAGCACA+AGG | - | chr2.3:76256348-76256367 | None:intergenic | 30.0% | |
GTCTAAAGAACGATTAGATA+TGG | + | chr2.3:76257718-76257737 | MS.gene002004:CDS | 30.0% | |
GTTCCAAAAGTTCATGATTA+TGG | - | chr2.3:76255449-76255468 | None:intergenic | 30.0% | |
TAAGCAAAACCACTGAATTT+GGG | + | chr2.3:76255388-76255407 | MS.gene002004:CDS | 30.0% | |
TATCAGATGCTGACAAAAAT+CGG | + | chr2.3:76255505-76255524 | MS.gene002004:CDS | 30.0% | |
TCATCAAATGATGAGACTTA+TGG | + | chr2.3:76255560-76255579 | MS.gene002004:CDS | 30.0% | |
TGATCAGTTAATATAGTCTG+TGG | - | chr2.3:76256562-76256581 | None:intergenic | 30.0% | |
TGCACATTCTTAACAAATCT+AGG | - | chr2.3:76255686-76255705 | None:intergenic | 30.0% | |
TTGGAATAGCTTAACTCTTT+CGG | - | chr2.3:76257663-76257682 | None:intergenic | 30.0% | |
! | ACCAGGCAATATTTTCTAAA+CGG | - | chr2.3:76255767-76255786 | None:intergenic | 30.0% |
! | CCTTATCTTTCTGTGAATTT+TGG | + | chr2.3:76257181-76257200 | MS.gene002004:intron | 30.0% |
! | GAAGATTTTCTATTTCGTTG+AGG | - | chr2.3:76255339-76255358 | None:intergenic | 30.0% |
! | TGGGTTGGGATAAATAATTA+TGG | + | chr2.3:76255885-76255904 | MS.gene002004:CDS | 30.0% |
! | TTTTTATTCACCTTCTTGGT+AGG | + | chr2.3:76256507-76256526 | MS.gene002004:intron | 30.0% |
!! | GCTTTCTTAGGTTTTATGAA+TGG | + | chr2.3:76256529-76256548 | MS.gene002004:CDS | 30.0% |
!! | GTGAACTTTATCCTACTTTT+TGG | + | chr2.3:76257147-76257166 | MS.gene002004:intron | 30.0% |
!! | TTTCTGAAATAATACTGGTG+TGG | + | chr2.3:76256054-76256073 | MS.gene002004:intron | 30.0% |
!!! | CTTTTATTTTTACTCCCTTG+TGG | + | chr2.3:76256296-76256315 | MS.gene002004:intron | 30.0% |
!!! | GGTTTTTTTATTCACCTTCT+TGG | + | chr2.3:76256503-76256522 | MS.gene002004:intron | 30.0% |
AAGTTCATGATTATGGTGGT+TGG | - | chr2.3:76255442-76255461 | None:intergenic | 35.0% | |
ACAAATCAAAGCCTACACTT+TGG | + | chr2.3:76256168-76256187 | MS.gene002004:intron | 35.0% | |
ACCGTTTAGAAAATATTGCC+TGG | + | chr2.3:76255763-76255782 | MS.gene002004:CDS | 35.0% | |
ACTGTCTTGGATATACCAAA+TGG | + | chr2.3:76256137-76256156 | MS.gene002004:intron | 35.0% | |
ACTTAGAAACCGTTGAATGA+AGG | - | chr2.3:76256920-76256939 | None:intergenic | 35.0% | |
AGACATCACACAAAAGTTGA+AGG | + | chr2.3:76257428-76257447 | MS.gene002004:CDS | 35.0% | |
ATCATACAATTGGATGGATG+AGG | - | chr2.3:76255796-76255815 | None:intergenic | 35.0% | |
ATCCTTATGTTTGCCAAAAC+AGG | + | chr2.3:76255528-76255547 | MS.gene002004:CDS | 35.0% | |
ATTTCGTTGAGGCTTAGTTT+GGG | - | chr2.3:76255328-76255347 | None:intergenic | 35.0% | |
CAAAACATGCTTTCTGCATA+TGG | + | chr2.3:76256626-76256645 | MS.gene002004:CDS | 35.0% | |
CAATTAACGCCTTCATTCAA+CGG | + | chr2.3:76256908-76256927 | MS.gene002004:CDS | 35.0% | |
CACCGAAGATATCATACAAT+TGG | - | chr2.3:76255806-76255825 | None:intergenic | 35.0% | |
CAGCTTATAATTCCTTCATG+AGG | - | chr2.3:76257476-76257495 | None:intergenic | 35.0% | |
CCAAAAGTTCATGATTATGG+TGG | - | chr2.3:76255446-76255465 | None:intergenic | 35.0% | |
CTGGCACATTGTAATGAAAT+TGG | - | chr2.3:76257788-76257807 | None:intergenic | 35.0% | |
GCTTATAATTCCTTCATGAG+GGG | - | chr2.3:76257474-76257493 | None:intergenic | 35.0% | |
TAAACGGTTGTTTGCATCAA+GGG | - | chr2.3:76255751-76255770 | None:intergenic | 35.0% | |
TATTTCGTTGAGGCTTAGTT+TGG | - | chr2.3:76255329-76255348 | None:intergenic | 35.0% | |
TCAGTAAAAGGCAAATATCC+AGG | - | chr2.3:76255606-76255625 | None:intergenic | 35.0% | |
TCCTTATGTTTGCCAAAACA+GGG | + | chr2.3:76255529-76255548 | MS.gene002004:CDS | 35.0% | |
TGCATACATTTCCAAAGTGT+AGG | - | chr2.3:76256182-76256201 | None:intergenic | 35.0% | |
TTGTTCTTGAAGCTTCGAAA+AGG | - | chr2.3:76257354-76257373 | None:intergenic | 35.0% | |
! | AAATCTAGGGTTTCTTCTTC+TGG | - | chr2.3:76255672-76255691 | None:intergenic | 35.0% |
! | ATATAGTTCTGTATGCAGGA+AGG | - | chr2.3:76255488-76255507 | None:intergenic | 35.0% |
! | ATGAACAGAAATCCCTGTTT+TGG | - | chr2.3:76255544-76255563 | None:intergenic | 35.0% |
! | CAAAATGTTAGCCTCAAAAC+AGG | + | chr2.3:76257284-76257303 | MS.gene002004:CDS | 35.0% |
! | CCACCATAATCATGAACTTT+TGG | + | chr2.3:76255443-76255462 | MS.gene002004:CDS | 35.0% |
! | CTTACGTCCTTTTCAGTAAA+AGG | - | chr2.3:76255618-76255637 | None:intergenic | 35.0% |
! | CTTTTACTGAAAAGGACGTA+AGG | + | chr2.3:76255616-76255635 | MS.gene002004:CDS | 35.0% |
! | TCTGATATAGTTCTGTATGC+AGG | - | chr2.3:76255492-76255511 | None:intergenic | 35.0% |
! | TGTCACCAGTTTGAATTTTC+TGG | + | chr2.3:76257500-76257519 | MS.gene002004:CDS | 35.0% |
!! | CTTAGGTTTTATGAATGGGA+AGG | + | chr2.3:76256534-76256553 | MS.gene002004:CDS | 35.0% |
!! | CTTAGTTTGGGTTGATGATT+TGG | - | chr2.3:76255316-76255335 | None:intergenic | 35.0% |
!! | TCTAAGAAGCCATTTTCTTG+CGG | + | chr2.3:76256858-76256877 | MS.gene002004:CDS | 35.0% |
!!! | CTGTTTTGAGGCTAACATTT+TGG | - | chr2.3:76257286-76257305 | None:intergenic | 35.0% |
!!! | GCATCTTTTTCAGTTGAAGA+TGG | + | chr2.3:76257395-76257414 | MS.gene002004:CDS | 35.0% |
ATTAACAACCTTTATGGCCC+AGG | - | chr2.3:76255967-76255986 | None:intergenic | 40.0% | |
CATCACACAAAAGTTGAAGG+AGG | + | chr2.3:76257431-76257450 | MS.gene002004:CDS | 40.0% | |
CCAGAGATACTTCTACCATT+AGG | + | chr2.3:76257804-76257823 | MS.gene002004:CDS | 40.0% | |
CTAAACGGTTGTTTGCATCA+AGG | - | chr2.3:76255752-76255771 | None:intergenic | 40.0% | |
GAGACAGAAGAATGGAAACT+TGG | - | chr2.3:76257751-76257770 | None:intergenic | 40.0% | |
GCTTCAAGAACAACTTGTGT+TGG | + | chr2.3:76257361-76257380 | MS.gene002004:CDS | 40.0% | |
GTCTTGGATATACCAAATGG+AGG | + | chr2.3:76256140-76256159 | MS.gene002004:intron | 40.0% | |
TACTGCAAGATGAAACTGTC+CGG | + | chr2.3:76255934-76255953 | MS.gene002004:CDS | 40.0% | |
TAGTAGCAAAGTTTCCGTCT+TGG | + | chr2.3:76256653-76256672 | MS.gene002004:CDS | 40.0% | |
TAGTCATTCCCGCAAGAAAA+TGG | - | chr2.3:76256870-76256889 | None:intergenic | 40.0% | |
TCAGTTGACGACTTTGAACT+AGG | + | chr2.3:76256745-76256764 | MS.gene002004:CDS | 40.0% | |
TCTTATGCGAGACAGAAGAA+TGG | - | chr2.3:76257759-76257778 | None:intergenic | 40.0% | |
TCTTGGTTCAATGCTGTTCT+AGG | + | chr2.3:76256670-76256689 | MS.gene002004:CDS | 40.0% | |
TGAAGCTTCGAAAAGGCAAA+AGG | - | chr2.3:76257347-76257366 | None:intergenic | 40.0% | |
! | AGAACAGCATTGAACCAAGA+CGG | - | chr2.3:76256670-76256689 | None:intergenic | 40.0% |
! | TCTCTGAGAGTTCTTTCAAC+AGG | + | chr2.3:76257539-76257558 | MS.gene002004:CDS | 40.0% |
!! | ATTTTGGAGATTCTGCTGCA+TGG | - | chr2.3:76257270-76257289 | None:intergenic | 40.0% |
!! | CCTAATGGTAGAAGTATCTC+TGG | - | chr2.3:76257807-76257826 | None:intergenic | 40.0% |
!! | CTAAGAAGCCATTTTCTTGC+GGG | + | chr2.3:76256859-76256878 | MS.gene002004:CDS | 40.0% |
!!! | TCCCTGTTTTGGCAAACATA+AGG | - | chr2.3:76255533-76255552 | None:intergenic | 40.0% |
ATAAGCCTGACAACCACATC+TGG | - | chr2.3:76255361-76255380 | None:intergenic | 45.0% | |
ATATAGCTCGCGCTCACTTT+GGG | + | chr2.3:76256825-76256844 | MS.gene002004:CDS | 45.0% | |
ATCTTCCAGATGTGGTTGTC+AGG | + | chr2.3:76255353-76255372 | MS.gene002004:CDS | 45.0% | |
ATGCAGGAAGGAATCGAACT+TGG | - | chr2.3:76255476-76255495 | None:intergenic | 45.0% | |
ATGCATATCTTCCCATCCGA+TGG | + | chr2.3:76257582-76257601 | MS.gene002004:CDS | 45.0% | |
ATTAGACGTCATCGTACCGA+AGG | + | chr2.3:76255222-76255241 | MS.gene002004:CDS | 45.0% | |
CATCGTACCGAAGGAAAAGA+CGG | + | chr2.3:76255231-76255250 | MS.gene002004:CDS | 45.0% | |
CCTAAGAAAGCCTACCAAGA+AGG | - | chr2.3:76256520-76256539 | None:intergenic | 45.0% | |
CCTTCTTGGTAGGCTTTCTT+AGG | + | chr2.3:76256517-76256536 | MS.gene002004:intron | 45.0% | |
GCTTGCTCACTTTGTTGAAC+AGG | + | chr2.3:76256951-76256970 | MS.gene002004:CDS | 45.0% | |
GGAAGGAATCGAACTTGGTT+TGG | - | chr2.3:76255471-76255490 | None:intergenic | 45.0% | |
GGATGGGAAGATATGCATCT+GGG | - | chr2.3:76257580-76257599 | None:intergenic | 45.0% | |
GGTTTCTAAGTGCACAGACA+CGG | + | chr2.3:76256929-76256948 | MS.gene002004:CDS | 45.0% | |
TAGGTGAACGCTACAATGAC+TGG | + | chr2.3:76256689-76256708 | MS.gene002004:CDS | 45.0% | |
TATATAGCTCGCGCTCACTT+TGG | + | chr2.3:76256824-76256843 | MS.gene002004:CDS | 45.0% | |
TATGGAATGCCCTGCTTCTT+TGG | + | chr2.3:76255903-76255922 | MS.gene002004:CDS | 45.0% | |
TCATAAGCAGCATCGTGAGT+GGG | - | chr2.3:76255165-76255184 | None:intergenic | 45.0% | |
TCGAAAAGGCAAAAGGAGTG+AGG | - | chr2.3:76257340-76257359 | None:intergenic | 45.0% | |
TGAACGCTACAATGACTGGA+AGG | + | chr2.3:76256693-76256712 | MS.gene002004:CDS | 45.0% | |
TGATATCTTCGGTGATGCTG+TGG | + | chr2.3:76255812-76255831 | MS.gene002004:CDS | 45.0% | |
TTATGGCCCAGGAAAATGAC+CGG | - | chr2.3:76255956-76255975 | None:intergenic | 45.0% | |
TTGACGACTTTGAACTAGGC+TGG | + | chr2.3:76256749-76256768 | MS.gene002004:CDS | 45.0% | |
! | ACTCATTTTGCCAAGACCTG+CGG | + | chr2.3:76255192-76255211 | MS.gene002004:CDS | 45.0% |
! | AGGGAGATGGTCTGTTCTTT+TGG | + | chr2.3:76256772-76256791 | MS.gene002004:CDS | 45.0% |
! | GGGAGATGGTCTGTTCTTTT+GGG | + | chr2.3:76256773-76256792 | MS.gene002004:CDS | 45.0% |
! | TACTTTGTTTGTCACCGTGC+TGG | + | chr2.3:76255279-76255298 | MS.gene002004:CDS | 45.0% |
! | TTTGGTTCGCTTTGCACAAC+AGG | + | chr2.3:76257199-76257218 | MS.gene002004:intron | 45.0% |
!! | AAACTGTCCGGTCATTTTCC+TGG | + | chr2.3:76255946-76255965 | MS.gene002004:CDS | 45.0% |
!! | AACTGTCCGGTCATTTTCCT+GGG | + | chr2.3:76255947-76255966 | MS.gene002004:CDS | 45.0% |
!! | GTCATTTTCCTGGGCCATAA+AGG | + | chr2.3:76255956-76255975 | MS.gene002004:CDS | 45.0% |
!! | GTTTGGGTTGATGATTTGGC+AGG | - | chr2.3:76255312-76255331 | None:intergenic | 45.0% |
AAGGAGGTCGCAGAGTTTAC+TGG | + | chr2.3:76257447-76257466 | MS.gene002004:CDS | 50.0% | |
AATAGAGAAGCCGCAGGTCT+TGG | - | chr2.3:76255205-76255224 | None:intergenic | 50.0% | |
ACCGAAGGAAAAGACGGTGT+TGG | + | chr2.3:76255237-76255256 | MS.gene002004:CDS | 50.0% | |
ACGACTTTGAACTAGGCTGG+AGG | + | chr2.3:76256752-76256771 | MS.gene002004:CDS | 50.0% | |
ACGTCTAATAGAGAAGCCGC+AGG | - | chr2.3:76255211-76255230 | None:intergenic | 50.0% | |
ACTCTTTCGGCATGATCGCT+AGG | - | chr2.3:76257650-76257669 | None:intergenic | 50.0% | |
ACTGCATTTGACATGCCGCT+GGG | + | chr2.3:76255858-76255877 | MS.gene002004:CDS | 50.0% | |
AGCACACAGCCAAAGAAGCA+GGG | - | chr2.3:76255915-76255934 | None:intergenic | 50.0% | |
CAAATTGTGTTGTGGCCCCT+TGG | + | chr2.3:76256026-76256045 | MS.gene002004:intron | 50.0% | |
CGACTTTGAACTAGGCTGGA+GGG | + | chr2.3:76256753-76256772 | MS.gene002004:CDS | 50.0% | |
CGGATGGGAAGATATGCATC+TGG | - | chr2.3:76257581-76257600 | None:intergenic | 50.0% | |
CTGAATTTGGGCCTCCAGAA+TGG | + | chr2.3:76255400-76255419 | MS.gene002004:CDS | 50.0% | |
CTTGCGGGAATGACTACAAC+TGG | + | chr2.3:76256874-76256893 | MS.gene002004:CDS | 50.0% | |
GTCATAAGCAGCATCGTGAG+TGG | - | chr2.3:76255166-76255185 | None:intergenic | 50.0% | |
GTTTACTGGTCCCCTCATGA+AGG | + | chr2.3:76257461-76257480 | MS.gene002004:CDS | 50.0% | |
TAGCACACAGCCAAAGAAGC+AGG | - | chr2.3:76255916-76255935 | None:intergenic | 50.0% | |
! | GCCAACACCGTCTTTTCCTT+CGG | - | chr2.3:76255241-76255260 | None:intergenic | 50.0% |
! | TTCTGGAGGCCCAAATTCAG+TGG | - | chr2.3:76255400-76255419 | None:intergenic | 50.0% |
!! | GGAAAAGACGGTGTTGGCAA+AGG | + | chr2.3:76255243-76255262 | MS.gene002004:CDS | 50.0% |
!! | TGGTGAAGGTACTTCAGCTG+TGG | + | chr2.3:76256396-76256415 | MS.gene002004:intron | 50.0% |
AAACCAGTGACGCGCCATTC+TGG | - | chr2.3:76255417-76255436 | None:intergenic | 55.0% | |
ACTGATACGACGCCATCGGA+TGG | - | chr2.3:76257597-76257616 | None:intergenic | 55.0% | |
ATCCCAACCCATATCCCCAG+CGG | - | chr2.3:76255876-76255895 | None:intergenic | 55.0% | |
CACTGCATTTGACATGCCGC+TGG | + | chr2.3:76255857-76255876 | MS.gene002004:CDS | 55.0% | |
CTGATACGACGCCATCGGAT+GGG | - | chr2.3:76257596-76257615 | None:intergenic | 55.0% | |
CTGCATTTGACATGCCGCTG+GGG | + | chr2.3:76255859-76255878 | MS.gene002004:CDS | 55.0% | |
GATGGATGAGGCATACGACC+AGG | - | chr2.3:76255784-76255803 | None:intergenic | 55.0% | |
GCACACTGATACGACGCCAT+CGG | - | chr2.3:76257601-76257620 | None:intergenic | 55.0% | |
GTAGCAGCGTGCGATTCCAT+GGG | - | chr2.3:76257314-76257333 | None:intergenic | 55.0% | |
TAGCAGCGTGCGATTCCATG+GGG | - | chr2.3:76257313-76257332 | None:intergenic | 55.0% | |
TGAACTAGGCTGGAGGGAGA+TGG | + | chr2.3:76256759-76256778 | MS.gene002004:CDS | 55.0% | |
TGACATGCCGCTGGGGATAT+GGG | + | chr2.3:76255866-76255885 | MS.gene002004:CDS | 55.0% | |
TGTAGCAGCGTGCGATTCCA+TGG | - | chr2.3:76257315-76257334 | None:intergenic | 55.0% | |
TTGACATGCCGCTGGGGATA+TGG | + | chr2.3:76255865-76255884 | MS.gene002004:CDS | 55.0% | |
! | CTTGAGAAGTGCGTCGAACC+TGG | + | chr2.3:76255585-76255604 | MS.gene002004:CDS | 55.0% |
! | TGGTGAAGGTACGTCAGCTG+TGG | + | chr2.3:76256259-76256278 | MS.gene002004:intron | 55.0% |
AGCAGCGTGCGATTCCATGG+GGG | - | chr2.3:76257312-76257331 | None:intergenic | 60.0% | |
ATGCCGCTGGGGATATGGGT+TGG | + | chr2.3:76255870-76255889 | MS.gene002004:CDS | 60.0% | |
CCTCAAAACAGGAGCCCCCA+TGG | + | chr2.3:76257295-76257314 | MS.gene002004:CDS | 60.0% | |
TGCCGCTGGGGATATGGGTT+GGG | + | chr2.3:76255871-76255890 | MS.gene002004:CDS | 60.0% | |
! | CCATGGGGGCTCCTGTTTTG+AGG | - | chr2.3:76257298-76257317 | None:intergenic | 60.0% |
!! | TGGCAGGAGTGTTGCCAGCA+CGG | - | chr2.3:76255296-76255315 | None:intergenic | 60.0% |
CCAGTGACGCGCCATTCTGG+AGG | - | chr2.3:76255414-76255433 | None:intergenic | 65.0% | |
CCTCCAGAATGGCGCGTCAC+TGG | + | chr2.3:76255411-76255430 | MS.gene002004:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 76255156 | 76257835 | 76255156 | ID=MS.gene002004 |
chr2.3 | mRNA | 76255156 | 76257835 | 76255156 | ID=MS.gene002004.t1;Parent=MS.gene002004 |
chr2.3 | exon | 76255156 | 76255977 | 76255156 | ID=MS.gene002004.t1.exon1;Parent=MS.gene002004.t1 |
chr2.3 | CDS | 76255156 | 76255977 | 76255156 | ID=cds.MS.gene002004.t1;Parent=MS.gene002004.t1 |
chr2.3 | exon | 76256529 | 76256972 | 76256529 | ID=MS.gene002004.t1.exon2;Parent=MS.gene002004.t1 |
chr2.3 | CDS | 76256529 | 76256972 | 76256529 | ID=cds.MS.gene002004.t1;Parent=MS.gene002004.t1 |
chr2.3 | exon | 76257221 | 76257835 | 76257221 | ID=MS.gene002004.t1.exon3;Parent=MS.gene002004.t1 |
chr2.3 | CDS | 76257221 | 76257835 | 76257221 | ID=cds.MS.gene002004.t1;Parent=MS.gene002004.t1 |
Gene Sequence |
Protein sequence |