Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002044.t1 | AFK39989.1 | 99 | 102 | 1 | 0 | 1 | 102 | 1 | 102 | 2.80E-42 | 181.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002044.t1 | Q2V3L3 | 81.9 | 94 | 17 | 0 | 10 | 103 | 12 | 105 | 1.9e-31 | 136.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002044.t1 | B7FLN9 | 99.0 | 102 | 1 | 0 | 1 | 102 | 1 | 102 | 2.0e-42 | 181.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene002044.t1 | TF | C2H2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002044.t1 | AT4G06634 | 80.189 | 106 | 21 | 0 | 10 | 115 | 12 | 117 | 5.64e-49 | 161 |
MS.gene002044.t1 | AT4G06634 | 72.642 | 106 | 18 | 1 | 10 | 115 | 12 | 106 | 6.37e-39 | 135 |
MS.gene002044.t1 | AT4G06634 | 74.324 | 74 | 19 | 0 | 42 | 115 | 6 | 79 | 3.64e-23 | 92.8 |
Find 41 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAAGGCTCCCGCTGTTAAA+TGG | 0.155162 | 2.3:-75826548 | MS.gene002044:CDS |
TCAGTAGTTGGCTCGGGTTC+TGG | 0.253968 | 2.3:+75825009 | None:intergenic |
CCTTTCCACACCCCTCATAA+TGG | 0.376204 | 2.3:+75824884 | None:intergenic |
AGGTAATGAAACTGTTTCTT+CGG | 0.385827 | 2.3:-75824864 | MS.gene002044:CDS |
GCAGTTTGTTTGCCATTATG+AGG | 0.386353 | 2.3:-75824896 | MS.gene002044:CDS |
ATGCTGTTAAGATGGGTAAC+AGG | 0.398286 | 2.3:-75826359 | MS.gene002044:intron |
GGTTCTGGCTCAGGAGCTAA+TGG | 0.412849 | 2.3:+75825024 | None:intergenic |
CAAGCACAGAAATGCATGTT+AGG | 0.413543 | 2.3:-75824828 | MS.gene002044:CDS |
GTTGGCTCGGGTTCTGGCTC+AGG | 0.414498 | 2.3:+75825015 | None:intergenic |
GGGAGCCTTGGACGTGAGAA+AGG | 0.426315 | 2.3:+75826560 | None:intergenic |
CCATTTAACAGCGGGAGCCT+TGG | 0.434294 | 2.3:+75826548 | None:intergenic |
CAAGGCTCCCGCTGTTAAAT+GGG | 0.434337 | 2.3:-75826547 | MS.gene002044:CDS |
TTATAGATGCTGGTGCTTTG+AGG | 0.456478 | 2.3:-75824945 | MS.gene002044:CDS |
CAGTTTGTTTGCCATTATGA+GGG | 0.471982 | 2.3:-75824895 | MS.gene002044:CDS |
CATAAATGCCTTGAAAGAAA+AGG | 0.473578 | 2.3:-75825055 | MS.gene002044:CDS |
CCACAAGACGTTGTTGCCAC+TGG | 0.487699 | 2.3:-75826392 | MS.gene002044:CDS |
CTTTGTAGCTATGAAGGCTG+TGG | 0.501431 | 2.3:-75824976 | MS.gene002044:CDS |
GGAAGTGTATGCTGTTAAGA+TGG | 0.510117 | 2.3:-75826367 | MS.gene002044:CDS |
AAGTACTTCAGTAGTTGGCT+CGG | 0.511218 | 2.3:+75825002 | None:intergenic |
AGGAAGCATTCCCACATCCA+TGG | 0.515275 | 2.3:-75824925 | MS.gene002044:CDS |
ACTGCCTCTCTCCATGGATG+TGG | 0.516577 | 2.3:+75824914 | None:intergenic |
GGAGCCTTGGACGTGAGAAA+GGG | 0.516870 | 2.3:+75826561 | None:intergenic |
AGTACTTCAGTAGTTGGCTC+GGG | 0.526508 | 2.3:+75825003 | None:intergenic |
CTGTTAAATGGGTCAAACAA+TGG | 0.559100 | 2.3:-75826536 | MS.gene002044:intron |
GTTTGCCATTATGAGGGGTG+TGG | 0.559433 | 2.3:-75824889 | MS.gene002044:CDS |
CAAGACGTTGTTGCCACTGG+TGG | 0.559549 | 2.3:-75826389 | MS.gene002044:CDS |
CCATTATGAGGGGTGTGGAA+AGG | 0.561192 | 2.3:-75824884 | MS.gene002044:CDS |
GGAAAGACATTTATAGATGC+TGG | 0.570125 | 2.3:-75824955 | MS.gene002044:CDS |
TGTTTGACCCATTTAACAGC+GGG | 0.574962 | 2.3:+75826540 | None:intergenic |
AAACAAACTGCCTCTCTCCA+TGG | 0.576594 | 2.3:+75824908 | None:intergenic |
ACGCCCCTTTCTCACGTCCA+AGG | 0.578019 | 2.3:-75826565 | MS.gene002044:CDS |
GAAGTGTATGCTGTTAAGAT+GGG | 0.578315 | 2.3:-75826366 | MS.gene002044:CDS |
CTGCCTCTCTCCATGGATGT+GGG | 0.586666 | 2.3:+75824915 | None:intergenic |
AGTTTGTTTGCCATTATGAG+GGG | 0.589676 | 2.3:-75824894 | MS.gene002044:CDS |
GAGCCTTGGACGTGAGAAAG+GGG | 0.615789 | 2.3:+75826562 | None:intergenic |
GGCGTCTCTCAAAGAGAGAG+TGG | 0.633941 | 2.3:+75826583 | None:intergenic |
AAGACGTTGTTGCCACTGGT+GGG | 0.637791 | 2.3:-75826388 | MS.gene002044:CDS |
CAGCATACACTTCCCACCAG+TGG | 0.655133 | 2.3:+75826376 | None:intergenic |
CCAGTGGCAACAACGTCTTG+TGG | 0.655732 | 2.3:+75826392 | None:intergenic |
ATTCCCACATCCATGGAGAG+AGG | 0.655979 | 2.3:-75824918 | MS.gene002044:CDS |
TTGTTTGACCCATTTAACAG+CGG | 0.696885 | 2.3:+75826539 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAAAAAAAAATGCAAAT+GGG | + | chr2.3:75825487-75825506 | None:intergenic | 10.0% |
!! | AATGTTATCTAATATTGTTA+AGG | + | chr2.3:75825410-75825429 | None:intergenic | 15.0% |
!! | AATTTACGAAAAAAAAGTAA+AGG | - | chr2.3:75825768-75825787 | MS.gene002044:intron | 15.0% |
!! | CATTAAAAAAAAAATGCAAA+TGG | + | chr2.3:75825488-75825507 | None:intergenic | 15.0% |
!! | AAAAATGTTACTAGTTAGAT+TGG | - | chr2.3:75825508-75825527 | MS.gene002044:intron | 20.0% |
!! | AAACTTTAACAGAAAAATTG+AGG | + | chr2.3:75824952-75824971 | None:intergenic | 20.0% |
!! | AACATTACAAATAACCTAAA+GGG | + | chr2.3:75825169-75825188 | None:intergenic | 20.0% |
!! | CATACAATATAATAATTGCT+TGG | + | chr2.3:75826283-75826302 | None:intergenic | 20.0% |
!!! | ATTATGAACAGATTTTTTTG+GGG | + | chr2.3:75825986-75826005 | None:intergenic | 20.0% |
!!! | CATTATGAACAGATTTTTTT+GGG | + | chr2.3:75825987-75826006 | None:intergenic | 20.0% |
!!! | TTTGTAATGTTGATTTATCA+TGG | - | chr2.3:75825178-75825197 | MS.gene002044:intron | 20.0% |
!!! | TTTTTCTGTTAAAGTTTGTT+TGG | - | chr2.3:75824955-75824974 | MS.gene002044:CDS | 20.0% |
! | AGATTGTTATGAAAGATAAC+TGG | + | chr2.3:75826148-75826167 | None:intergenic | 25.0% |
! | ATAACCTAAAGGGAAAATTA+TGG | + | chr2.3:75825159-75825178 | None:intergenic | 25.0% |
! | ATCATAGCAATGTTATTATC+AGG | - | chr2.3:75825004-75825023 | MS.gene002044:CDS | 25.0% |
! | ATTAAGAACATGATCTACAT+AGG | + | chr2.3:75825285-75825304 | None:intergenic | 25.0% |
! | ATTATGGGTGCTTAATTTAT+TGG | + | chr2.3:75825143-75825162 | None:intergenic | 25.0% |
! | CAACATTACAAATAACCTAA+AGG | + | chr2.3:75825170-75825189 | None:intergenic | 25.0% |
! | CAATTCATACTTGTAAAGTT+AGG | + | chr2.3:75825328-75825347 | None:intergenic | 25.0% |
! | CTAACTTTACAAGTATGAAT+TGG | - | chr2.3:75825326-75825345 | MS.gene002044:intron | 25.0% |
! | CTTGAAAATTCATATGCAAA+AGG | - | chr2.3:75825732-75825751 | MS.gene002044:intron | 25.0% |
! | CTTGAAAATTCATATGCAAA+CGG | + | chr2.3:75825751-75825732 | None:intergenic | 25.0% |
! | GATGTTTCATAAAAACTCTA+CGG | - | chr2.3:75825366-75825385 | MS.gene002044:intron | 25.0% |
! | TAACCTAAAGGGAAAATTAT+GGG | + | chr2.3:75825158-75825177 | None:intergenic | 25.0% |
! | TAATGTCTAATCAGAAAGAT+AGG | + | chr2.3:75825230-75825249 | None:intergenic | 25.0% |
! | TATGAATGAATTAATACTGC+TGG | - | chr2.3:75825849-75825868 | MS.gene002044:intron | 25.0% |
! | TCATAGCAATGTTATTATCA+GGG | - | chr2.3:75825005-75825024 | MS.gene002044:CDS | 25.0% |
!! | TATCTGAAATTAAGAGATCA+CGG | - | chr2.3:75825801-75825820 | MS.gene002044:intron | 25.0% |
!! | TATTTGAGATAGTTATGTCA+GGG | + | chr2.3:75825954-75825973 | None:intergenic | 25.0% |
!! | TTCTTTTTCCTTTTCTTTCA+AGG | + | chr2.3:75826378-75826397 | None:intergenic | 25.0% |
!!! | AAATTGAGTTGATGAAGAAA+AGG | + | chr2.3:75824919-75824938 | None:intergenic | 25.0% |
!!! | AATTGAGTTGATGAAGAAAA+GGG | + | chr2.3:75824918-75824937 | None:intergenic | 25.0% |
!!! | ATGGTTTTATTGATGCAAAA+AGG | - | chr2.3:75826188-75826207 | MS.gene002044:intron | 25.0% |
!!! | ATTTTCAAGCTTCAAATCTA+TGG | - | chr2.3:75825631-75825650 | MS.gene002044:intron | 25.0% |
!!! | GCATTATGAACAGATTTTTT+TGG | + | chr2.3:75825988-75826007 | None:intergenic | 25.0% |
!!! | TTATGAACAGATTTTTTTGG+GGG | + | chr2.3:75825985-75826004 | None:intergenic | 25.0% |
AAGATAACTGGAAAGCAAAT+TGG | + | chr2.3:75826136-75826155 | None:intergenic | 30.0% | |
AGCTCAATTGACAGTAAAAA+AGG | + | chr2.3:75825094-75825113 | None:intergenic | 30.0% | |
CATAAATGCCTTGAAAGAAA+AGG | - | chr2.3:75826367-75826386 | MS.gene002044:CDS | 30.0% | |
CATATGCAAAAGGATCAAAA+GGG | - | chr2.3:75825742-75825761 | MS.gene002044:intron | 30.0% | |
TAAGATTCATGTGCAAACAT+GGG | + | chr2.3:75825703-75825722 | None:intergenic | 30.0% | |
TCATATGCAAAAGGATCAAA+AGG | - | chr2.3:75825741-75825760 | MS.gene002044:intron | 30.0% | |
TCATGTTCTTAATCAAACGA+TGG | - | chr2.3:75825292-75825311 | MS.gene002044:intron | 30.0% | |
! | AGGTAATGAAACTGTTTCTT+CGG | - | chr2.3:75826558-75826577 | MS.gene002044:CDS | 30.0% |
! | ATCTGAAATTAAGAGATCAC+GGG | - | chr2.3:75825802-75825821 | MS.gene002044:intron | 30.0% |
! | CAAACTCATGTATTTCTGAA+TGG | - | chr2.3:75826169-75826188 | MS.gene002044:intron | 30.0% |
! | CTTTTTCTTTGTAGCTATGA+AGG | - | chr2.3:75826440-75826459 | MS.gene002044:intron | 30.0% |
! | GTATTTGAGATAGTTATGTC+AGG | + | chr2.3:75825955-75825974 | None:intergenic | 30.0% |
!! | AGAAAAAGTACTTCAGTAGT+TGG | + | chr2.3:75826428-75826447 | None:intergenic | 30.0% |
!! | ATTGAGTTGATGAAGAAAAG+GGG | + | chr2.3:75824917-75824936 | None:intergenic | 30.0% |
!! | CTTTTCTTTCAAGGCATTTA+TGG | + | chr2.3:75826369-75826388 | None:intergenic | 30.0% |
!!! | CTGTGTTTTGTTTTCTTTAG+AGG | - | chr2.3:75826340-75826359 | MS.gene002044:intron | 30.0% |
AAAAATGCAAATGGGCCAAA+AGG | + | chr2.3:75825479-75825498 | None:intergenic | 35.0% | |
AAAATGCAAATGGGCCAAAA+GGG | + | chr2.3:75825478-75825497 | None:intergenic | 35.0% | |
AGTTGAATGTTAAGCAAGCT+TGG | - | chr2.3:75826250-75826269 | MS.gene002044:intron | 35.0% | |
ATTCATATGCAAACGGATCA+AGG | + | chr2.3:75825613-75825632 | None:intergenic | 35.0% | |
CTAAGATTCATGTGCAAACA+TGG | + | chr2.3:75825704-75825723 | None:intergenic | 35.0% | |
CTGTTAAATGGGTCAAACAA+TGG | - | chr2.3:75824886-75824905 | MS.gene002044:CDS | 35.0% | |
GAAGTGTATGCTGTTAAGAT+GGG | - | chr2.3:75825056-75825075 | MS.gene002044:CDS | 35.0% | |
GGAAAGACATTTATAGATGC+TGG | - | chr2.3:75826467-75826486 | MS.gene002044:intron | 35.0% | |
GTAATGCTTCATTTCTACGT+TGG | - | chr2.3:75826065-75826084 | MS.gene002044:intron | 35.0% | |
GTTCTCAGTCTTCAAATCTA+TGG | - | chr2.3:75825670-75825689 | MS.gene002044:intron | 35.0% | |
TTCATATGCAAACGGATCAA+GGG | + | chr2.3:75825612-75825631 | None:intergenic | 35.0% | |
TTGTTTGACCCATTTAACAG+CGG | + | chr2.3:75824886-75824905 | None:intergenic | 35.0% | |
! | AGTTTGTTTGCCATTATGAG+GGG | - | chr2.3:75826528-75826547 | MS.gene002044:intron | 35.0% |
! | CAGTTTGTTTGCCATTATGA+GGG | - | chr2.3:75826527-75826546 | MS.gene002044:intron | 35.0% |
!!! | TGGTTTTTTCTCCTTCATTC+CGG | - | chr2.3:75825528-75825547 | MS.gene002044:intron | 35.0% |
AAGGTTGTACTAGTACGACA+TGG | + | chr2.3:75825908-75825927 | None:intergenic | 40.0% | |
AAGTACTTCAGTAGTTGGCT+CGG | + | chr2.3:75826423-75826442 | None:intergenic | 40.0% | |
ATGCTGTTAAGATGGGTAAC+AGG | - | chr2.3:75825063-75825082 | MS.gene002044:CDS | 40.0% | |
CAAGCACAGAAATGCATGTT+AGG | - | chr2.3:75826594-75826613 | MS.gene002044:CDS | 40.0% | |
CTACGGCAAAATTACACTTC+TGG | - | chr2.3:75825383-75825402 | MS.gene002044:intron | 40.0% | |
CTGTTCATGTGTGCTATGAA+AGG | + | chr2.3:75825927-75825946 | None:intergenic | 40.0% | |
TCATATGCAAACGGATCAAG+GGG | + | chr2.3:75825611-75825630 | None:intergenic | 40.0% | |
TCATTCATACATGCAGCGTT+AGG | + | chr2.3:75825838-75825857 | None:intergenic | 40.0% | |
TCTAGTCTACCCTACTAAGT+GGG | - | chr2.3:75826014-75826033 | MS.gene002044:intron | 40.0% | |
TGTTTGACCCATTTAACAGC+GGG | + | chr2.3:75824885-75824904 | None:intergenic | 40.0% | |
TTATAGATGCTGGTGCTTTG+AGG | - | chr2.3:75826477-75826496 | MS.gene002044:intron | 40.0% | |
TTCTAGTCTACCCTACTAAG+TGG | - | chr2.3:75826013-75826032 | MS.gene002044:intron | 40.0% | |
TTTGAAGACTGAGAACTCAC+AGG | + | chr2.3:75825666-75825685 | None:intergenic | 40.0% | |
! | AAGCCTTATCCCACTTAGTA+GGG | + | chr2.3:75826026-75826045 | None:intergenic | 40.0% |
! | GCACCCATAATTTTCCCTTT+AGG | - | chr2.3:75825152-75825171 | MS.gene002044:intron | 40.0% |
! | GCAGTTTGTTTGCCATTATG+AGG | - | chr2.3:75826526-75826545 | MS.gene002044:intron | 40.0% |
! | GGAAGTGTATGCTGTTAAGA+TGG | - | chr2.3:75825055-75825074 | MS.gene002044:CDS | 40.0% |
AAACAAACTGCCTCTCTCCA+TGG | + | chr2.3:75826517-75826536 | None:intergenic | 45.0% | |
ATCCTGCTGCTCAAACAAGA+TGG | - | chr2.3:75825576-75825595 | MS.gene002044:intron | 45.0% | |
CATATGCAAACGGATCAAGG+GGG | + | chr2.3:75825610-75825629 | None:intergenic | 45.0% | |
CTACCCTACTAAGTGGGATA+AGG | - | chr2.3:75826020-75826039 | MS.gene002044:intron | 45.0% | |
CTACTAAGTGGGATAAGGCT+TGG | - | chr2.3:75826025-75826044 | MS.gene002044:intron | 45.0% | |
CTTTGTAGCTATGAAGGCTG+TGG | - | chr2.3:75826446-75826465 | MS.gene002044:intron | 45.0% | |
GCCAAAAGGGCTAAATTGAC+GGG | + | chr2.3:75825465-75825484 | None:intergenic | 45.0% | |
GGCCAAAAGGGCTAAATTGA+CGG | + | chr2.3:75825466-75825485 | None:intergenic | 45.0% | |
TCATGTGCAAACATGGGTGA+AGG | + | chr2.3:75825697-75825716 | None:intergenic | 45.0% | |
TCCTGCTGCTCAAACAAGAT+GGG | - | chr2.3:75825577-75825596 | MS.gene002044:intron | 45.0% | |
! | AGTACTTCAGTAGTTGGCTC+GGG | + | chr2.3:75826422-75826441 | None:intergenic | 45.0% |
! | ATAAGGCTTGGTTGTGTTGG+TGG | - | chr2.3:75826037-75826056 | MS.gene002044:intron | 45.0% |
! | CAAGCCTTATCCCACTTAGT+AGG | + | chr2.3:75826027-75826046 | None:intergenic | 45.0% |
! | TCCCGTCAATTTAGCCCTTT+TGG | - | chr2.3:75825461-75825480 | MS.gene002044:intron | 45.0% |
! | TTTGAGGTCCTGGTTCAAAC+CGG | + | chr2.3:75825550-75825569 | None:intergenic | 45.0% |
AAGACGTTGTTGCCACTGGT+GGG | - | chr2.3:75825034-75825053 | MS.gene002044:CDS | 50.0% | |
ATTCCCACATCCATGGAGAG+AGG | - | chr2.3:75826504-75826523 | MS.gene002044:intron | 50.0% | |
CAAGGCTCCCGCTGTTAAAT+GGG | - | chr2.3:75824875-75824894 | MS.gene002044:CDS | 50.0% | |
CCTGGTTCAAACCGGAATGA+AGG | + | chr2.3:75825542-75825561 | None:intergenic | 50.0% | |
CCTTTCCACACCCCTCATAA+TGG | + | chr2.3:75826541-75826560 | None:intergenic | 50.0% | |
CTTGTTTGAGCAGCAGGATG+AGG | + | chr2.3:75825575-75825594 | None:intergenic | 50.0% | |
GTTTGCCATTATGAGGGGTG+TGG | - | chr2.3:75826533-75826552 | MS.gene002044:intron | 50.0% | |
! | CCATTATGAGGGGTGTGGAA+AGG | - | chr2.3:75826538-75826557 | MS.gene002044:CDS | 50.0% |
! | CCTTCATTCCGGTTTGAACC+AGG | - | chr2.3:75825539-75825558 | MS.gene002044:intron | 50.0% |
! | GGGATAAGGCTTGGTTGTGT+TGG | - | chr2.3:75826034-75826053 | MS.gene002044:intron | 50.0% |
!! | AGGAAGCATTCCCACATCCA+TGG | - | chr2.3:75826497-75826516 | MS.gene002044:intron | 50.0% |
ACTGCCTCTCTCCATGGATG+TGG | + | chr2.3:75826511-75826530 | None:intergenic | 55.0% | |
CAAGACGTTGTTGCCACTGG+TGG | - | chr2.3:75825033-75825052 | MS.gene002044:CDS | 55.0% | |
CAGCATACACTTCCCACCAG+TGG | + | chr2.3:75825049-75825068 | None:intergenic | 55.0% | |
CCAAGGCTCCCGCTGTTAAA+TGG | - | chr2.3:75824874-75824893 | MS.gene002044:CDS | 55.0% | |
CCACAAGACGTTGTTGCCAC+TGG | - | chr2.3:75825030-75825049 | MS.gene002044:CDS | 55.0% | |
CCAGTGGCAACAACGTCTTG+TGG | + | chr2.3:75825033-75825052 | None:intergenic | 55.0% | |
CCATTTAACAGCGGGAGCCT+TGG | + | chr2.3:75824877-75824896 | None:intergenic | 55.0% | |
CTGCCTCTCTCCATGGATGT+GGG | + | chr2.3:75826510-75826529 | None:intergenic | 55.0% | |
GAGCCTTGGACGTGAGAAAG+GGG | + | chr2.3:75824863-75824882 | None:intergenic | 55.0% | |
GCAGCAGGATGAGGAGTTTG+AGG | + | chr2.3:75825566-75825585 | None:intergenic | 55.0% | |
GGAGCCTTGGACGTGAGAAA+GGG | + | chr2.3:75824864-75824883 | None:intergenic | 55.0% | |
GGCGTCTCTCAAAGAGAGAG+TGG | + | chr2.3:75824842-75824861 | None:intergenic | 55.0% | |
! | GCCCATCTTGTTTGAGCAGC+AGG | + | chr2.3:75825581-75825600 | None:intergenic | 55.0% |
! | GGATGAGGAGTTTGAGGTCC+TGG | + | chr2.3:75825560-75825579 | None:intergenic | 55.0% |
!! | GGTTCTGGCTCAGGAGCTAA+TGG | + | chr2.3:75826401-75826420 | None:intergenic | 55.0% |
!! | TCAGTAGTTGGCTCGGGTTC+TGG | + | chr2.3:75826416-75826435 | None:intergenic | 55.0% |
ACGCCCCTTTCTCACGTCCA+AGG | - | chr2.3:75824857-75824876 | MS.gene002044:CDS | 60.0% | |
GGGAGCCTTGGACGTGAGAA+AGG | + | chr2.3:75824865-75824884 | None:intergenic | 60.0% | |
!! | GTTGGCTCGGGTTCTGGCTC+AGG | + | chr2.3:75826410-75826429 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 75824822 | 75826622 | 75824822 | ID=MS.gene002044 |
chr2.3 | mRNA | 75824822 | 75826622 | 75824822 | ID=MS.gene002044.t1;Parent=MS.gene002044 |
chr2.3 | exon | 75826537 | 75826622 | 75826537 | ID=MS.gene002044.t1.exon1;Parent=MS.gene002044.t1 |
chr2.3 | CDS | 75826537 | 75826622 | 75826537 | ID=cds.MS.gene002044.t1;Parent=MS.gene002044.t1 |
chr2.3 | exon | 75826360 | 75826418 | 75826360 | ID=MS.gene002044.t1.exon2;Parent=MS.gene002044.t1 |
chr2.3 | CDS | 75826360 | 75826418 | 75826360 | ID=cds.MS.gene002044.t1;Parent=MS.gene002044.t1 |
chr2.3 | exon | 75824822 | 75825084 | 75824822 | ID=MS.gene002044.t1.exon3;Parent=MS.gene002044.t1 |
chr2.3 | CDS | 75824822 | 75825084 | 75824822 | ID=cds.MS.gene002044.t1;Parent=MS.gene002044.t1 |
Gene Sequence |
Protein sequence |