Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002355.t1 | KEH36500.1 | 95.7 | 720 | 30 | 1 | 1 | 720 | 1 | 719 | 0.00E+00 | 1401 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002355.t1 | Q9SSE9 | 29.9 | 747 | 371 | 14 | 35 | 710 | 226 | 890 | 4.6e-84 | 313.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002355.t1 | A0A072V4C3 | 95.7 | 720 | 30 | 1 | 1 | 720 | 33 | 751 | 0.0e+00 | 1401.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene002355.t1 | TR | Jumonji |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002355.t1 | MTR_2g011630 | 95.694 | 720 | 30 | 1 | 1 | 720 | 33 | 751 | 0.0 | 1434 |
MS.gene002355.t1 | MTR_2g011630 | 95.694 | 720 | 30 | 1 | 1 | 720 | 1 | 719 | 0.0 | 1431 |
MS.gene002355.t1 | MTR_2g011630 | 94.587 | 702 | 37 | 1 | 19 | 720 | 263 | 963 | 0.0 | 1382 |
MS.gene002355.t1 | MTR_4g091520 | 63.082 | 558 | 179 | 7 | 181 | 714 | 725 | 1279 | 0.0 | 704 |
MS.gene002355.t1 | MTR_4g091520 | 56.471 | 170 | 72 | 2 | 31 | 200 | 333 | 500 | 8.95e-48 | 183 |
MS.gene002355.t1 | MTR_4g091520 | 60.128 | 469 | 160 | 7 | 181 | 625 | 725 | 1190 | 0.0 | 556 |
MS.gene002355.t1 | MTR_4g091520 | 56.471 | 170 | 72 | 2 | 31 | 200 | 333 | 500 | 9.81e-48 | 182 |
MS.gene002355.t1 | MTR_4g091520 | 60.128 | 469 | 160 | 7 | 181 | 625 | 690 | 1155 | 0.0 | 555 |
MS.gene002355.t1 | MTR_4g091520 | 56.471 | 170 | 72 | 2 | 31 | 200 | 333 | 500 | 8.24e-48 | 183 |
MS.gene002355.t1 | MTR_4g091520 | 60.128 | 469 | 160 | 7 | 181 | 625 | 655 | 1120 | 0.0 | 555 |
MS.gene002355.t1 | MTR_4g091520 | 56.471 | 170 | 72 | 2 | 31 | 200 | 333 | 500 | 6.47e-48 | 183 |
MS.gene002355.t1 | MTR_7g117445 | 36.351 | 740 | 396 | 15 | 31 | 714 | 207 | 927 | 1.77e-142 | 441 |
MS.gene002355.t1 | MTR_7g117445 | 36.735 | 735 | 390 | 17 | 36 | 714 | 212 | 927 | 3.04e-142 | 440 |
MS.gene002355.t1 | MTR_7g117445 | 36.351 | 740 | 396 | 15 | 31 | 714 | 207 | 927 | 3.85e-142 | 441 |
MS.gene002355.t1 | MTR_7g117445 | 35.556 | 675 | 360 | 17 | 36 | 654 | 212 | 867 | 5.62e-117 | 372 |
MS.gene002355.t1 | MTR_1g069565 | 35.050 | 699 | 387 | 15 | 45 | 716 | 226 | 884 | 1.46e-116 | 372 |
MS.gene002355.t1 | MTR_1g114150 | 34.519 | 675 | 367 | 15 | 45 | 703 | 425 | 1040 | 1.73e-116 | 375 |
MS.gene002355.t1 | MTR_4g132540 | 33.427 | 709 | 387 | 13 | 23 | 713 | 225 | 866 | 5.48e-115 | 367 |
MS.gene002355.t1 | MTR_1g083120 | 31.983 | 691 | 400 | 15 | 37 | 718 | 269 | 898 | 2.33e-111 | 359 |
MS.gene002355.t1 | MTR_1g083120 | 31.983 | 691 | 400 | 15 | 37 | 718 | 286 | 915 | 3.80e-111 | 358 |
MS.gene002355.t1 | MTR_1g114130 | 35.207 | 676 | 365 | 18 | 45 | 703 | 409 | 1028 | 5.14e-109 | 356 |
MS.gene002355.t1 | MTR_1g069565 | 32.407 | 756 | 387 | 18 | 45 | 716 | 226 | 941 | 2.44e-104 | 340 |
MS.gene002355.t1 | MTR_5g047620 | 35.503 | 676 | 374 | 22 | 45 | 703 | 157 | 787 | 2.05e-102 | 333 |
MS.gene002355.t1 | MTR_2g024270 | 32.097 | 701 | 365 | 15 | 21 | 710 | 216 | 816 | 3.53e-92 | 305 |
MS.gene002355.t1 | MTR_1g083120 | 31.200 | 625 | 360 | 15 | 37 | 652 | 269 | 832 | 1.77e-91 | 304 |
MS.gene002355.t1 | MTR_1g083120 | 31.200 | 625 | 360 | 15 | 37 | 652 | 269 | 832 | 2.05e-91 | 304 |
MS.gene002355.t1 | MTR_2g024140 | 30.659 | 698 | 367 | 13 | 21 | 710 | 96 | 684 | 5.51e-87 | 288 |
MS.gene002355.t1 | MTR_0020s0100 | 31.805 | 676 | 362 | 20 | 45 | 700 | 99 | 695 | 2.65e-82 | 276 |
MS.gene002355.t1 | MTR_1g114150 | 31.439 | 563 | 311 | 15 | 45 | 591 | 425 | 928 | 4.01e-72 | 253 |
MS.gene002355.t1 | MTR_1g008060 | 34.895 | 427 | 238 | 11 | 39 | 456 | 935 | 1330 | 9.05e-69 | 246 |
MS.gene002355.t1 | MTR_1g008060 | 53.289 | 152 | 71 | 0 | 564 | 715 | 1539 | 1690 | 1.81e-49 | 188 |
MS.gene002355.t1 | MTR_1g008060 | 34.895 | 427 | 238 | 11 | 39 | 456 | 944 | 1339 | 1.08e-68 | 246 |
MS.gene002355.t1 | MTR_1g008060 | 53.289 | 152 | 71 | 0 | 564 | 715 | 1548 | 1699 | 2.14e-49 | 188 |
MS.gene002355.t1 | MTR_1g114070 | 35.666 | 443 | 261 | 10 | 45 | 473 | 307 | 739 | 2.22e-61 | 223 |
MS.gene002355.t1 | MTR_1g114070 | 48.667 | 150 | 77 | 0 | 567 | 716 | 778 | 927 | 2.01e-41 | 163 |
MS.gene002355.t1 | MTR_5g065200 | 33.409 | 443 | 271 | 11 | 45 | 473 | 223 | 655 | 1.06e-57 | 211 |
MS.gene002355.t1 | MTR_5g065200 | 49.664 | 149 | 75 | 0 | 567 | 715 | 688 | 836 | 8.33e-42 | 164 |
MS.gene002355.t1 | MTR_2g024240 | 49.091 | 110 | 56 | 0 | 567 | 676 | 279 | 388 | 1.57e-28 | 119 |
MS.gene002355.t1 | MTR_2g024240 | 37.778 | 135 | 81 | 2 | 337 | 469 | 115 | 248 | 3.86e-18 | 87.8 |
MS.gene002355.t1 | MTR_8g465720 | 50.000 | 98 | 47 | 2 | 557 | 654 | 44 | 139 | 2.99e-24 | 100 |
MS.gene002355.t1 | MTR_8g465700 | 37.059 | 170 | 99 | 4 | 281 | 447 | 13 | 177 | 4.52e-22 | 97.4 |
MS.gene002355.t1 | MTR_8g062940 | 28.114 | 281 | 161 | 8 | 40 | 314 | 110 | 355 | 7.39e-21 | 95.5 |
MS.gene002355.t1 | MTR_0295s0020 | 38.938 | 113 | 66 | 2 | 363 | 473 | 48 | 159 | 1.99e-16 | 78.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002355.t1 | AT4G21430 | 38.571 | 700 | 355 | 13 | 23 | 716 | 287 | 917 | 9.31e-146 | 449 |
MS.gene002355.t1 | AT4G00990 | 35.632 | 696 | 409 | 11 | 39 | 713 | 154 | 831 | 2.59e-137 | 425 |
MS.gene002355.t1 | AT1G62310 | 35.598 | 677 | 353 | 13 | 35 | 700 | 279 | 883 | 6.55e-123 | 388 |
MS.gene002355.t1 | AT4G00990 | 34.961 | 635 | 374 | 11 | 39 | 652 | 154 | 770 | 2.66e-116 | 368 |
MS.gene002355.t1 | AT4G00990 | 34.851 | 637 | 376 | 11 | 39 | 654 | 154 | 772 | 3.89e-116 | 367 |
MS.gene002355.t1 | AT1G09060 | 31.004 | 687 | 402 | 18 | 37 | 718 | 292 | 911 | 1.05e-90 | 304 |
MS.gene002355.t1 | AT1G09060 | 31.004 | 687 | 402 | 18 | 37 | 718 | 292 | 911 | 1.05e-90 | 304 |
MS.gene002355.t1 | AT1G09060 | 31.004 | 687 | 402 | 18 | 37 | 718 | 278 | 897 | 1.27e-90 | 303 |
MS.gene002355.t1 | AT1G09060 | 31.004 | 687 | 402 | 18 | 37 | 718 | 278 | 897 | 1.27e-90 | 303 |
MS.gene002355.t1 | AT3G07610 | 33.962 | 530 | 292 | 9 | 193 | 710 | 429 | 912 | 3.12e-83 | 285 |
MS.gene002355.t1 | AT1G11950 | 34.820 | 471 | 284 | 10 | 36 | 501 | 264 | 716 | 1.10e-75 | 260 |
MS.gene002355.t1 | AT1G11950 | 56.250 | 80 | 35 | 0 | 565 | 644 | 722 | 801 | 1.02e-19 | 94.7 |
MS.gene002355.t1 | AT1G11950 | 34.820 | 471 | 284 | 10 | 36 | 501 | 264 | 716 | 2.12e-75 | 261 |
MS.gene002355.t1 | AT1G11950 | 53.020 | 149 | 70 | 0 | 565 | 713 | 722 | 870 | 4.30e-45 | 174 |
MS.gene002355.t1 | AT1G11950 | 34.820 | 471 | 284 | 10 | 36 | 501 | 264 | 716 | 2.12e-75 | 261 |
MS.gene002355.t1 | AT1G11950 | 53.020 | 149 | 70 | 0 | 565 | 713 | 722 | 870 | 4.30e-45 | 174 |
MS.gene002355.t1 | AT3G07610 | 48.684 | 152 | 78 | 0 | 559 | 710 | 739 | 890 | 1.72e-42 | 166 |
MS.gene002355.t1 | AT3G07610 | 34.247 | 292 | 170 | 7 | 193 | 473 | 429 | 709 | 1.93e-40 | 160 |
MS.gene002355.t1 | AT3G07610 | 34.457 | 267 | 156 | 6 | 193 | 448 | 429 | 687 | 8.11e-37 | 148 |
Find 114 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTATGAAGTTCCTGAAATTT+TGG | 0.135711 | 2.3:-72124491 | MS.gene002355:CDS |
TCTAGATCAGAGCATCTTTC+TGG | 0.167659 | 2.3:-72122299 | MS.gene002355:CDS |
GTGATTCCAGGTTAATATTA+TGG | 0.205887 | 2.3:-72122873 | MS.gene002355:intron |
CATTTCTTCGATCCAGCTTA+TGG | 0.211182 | 2.3:+72124543 | None:intergenic |
AGACTTACTTGAAGCTTGTT+TGG | 0.301685 | 2.3:-72124179 | MS.gene002355:CDS |
CCATATGTATACATTTCTTA+TGG | 0.304239 | 2.3:-72123629 | MS.gene002355:CDS |
TAGCAAGTTCAATCATGTTT+TGG | 0.316293 | 2.3:+72121540 | None:intergenic |
AAATGCTCTTGTCTTCTAAA+AGG | 0.325409 | 2.3:+72124701 | None:intergenic |
CATGAGACGCTGAAACTAAA+TGG | 0.343510 | 2.3:-72123809 | MS.gene002355:CDS |
GACCGAGTTACCTGACAAAA+TGG | 0.346517 | 2.3:-72124749 | MS.gene002355:CDS |
GAAACTGTTCTTTGAATAGT+TGG | 0.351565 | 2.3:+72123774 | None:intergenic |
GGCTCTTCATAGCATGGATA+TGG | 0.356860 | 2.3:-72121595 | MS.gene002355:CDS |
TTGCTCAGTGGGATGTCTTC+CGG | 0.358224 | 2.3:-72122505 | MS.gene002355:CDS |
AAGATGCTCTGATCTAGAAT+TGG | 0.360917 | 2.3:+72122304 | None:intergenic |
ATTTCTTCGATCCAGCTTAT+GGG | 0.369497 | 2.3:+72124544 | None:intergenic |
ATGAAAACAGGTGAAGAAAA+TGG | 0.371127 | 2.3:-72121616 | MS.gene002355:intron |
TTTGGTCTGTATGCTCCTTC+CGG | 0.375126 | 2.3:-72125203 | MS.gene002355:CDS |
CTGGATGTCCATACCAGATT+AGG | 0.389865 | 2.3:-72122101 | MS.gene002355:CDS |
GATATCAGACCTTACTTTCA+CGG | 0.390688 | 2.3:+72125360 | None:intergenic |
AACTGATACGTCAATGTTGC+TGG | 0.394642 | 2.3:-72124665 | MS.gene002355:CDS |
GAACAAGTTCCTCGACAAAC+TGG | 0.395372 | 2.3:+72125416 | None:intergenic |
ATGAGACTGAAGGAGGAGTT+TGG | 0.403179 | 2.3:-72122262 | MS.gene002355:intron |
CCATAAGAAATGTATACATA+TGG | 0.404527 | 2.3:+72123629 | None:intergenic |
AGACCTTAGAATTCCTAATC+TGG | 0.404706 | 2.3:+72122088 | None:intergenic |
TACTTGAAGCTTGTTTGGAT+TGG | 0.411244 | 2.3:-72124174 | MS.gene002355:CDS |
TGCAGAAGACGCGGAACAAA+AGG | 0.411789 | 2.3:-72122738 | MS.gene002355:CDS |
AGCAATGGAGAATGTGGTTC+TGG | 0.417766 | 2.3:-72122599 | MS.gene002355:CDS |
GATGGATCTCATCAGTCAAT+TGG | 0.423091 | 2.3:+72121788 | None:intergenic |
CAACGAGTATGACAGCAATA+AGG | 0.425480 | 2.3:-72122420 | MS.gene002355:intron |
GGAGAATTTATATGCTCAAA+GGG | 0.425573 | 2.3:+72124775 | None:intergenic |
CCTTCAGAGCTAGGTGGTTG+TGG | 0.433804 | 2.3:-72124598 | MS.gene002355:CDS |
CATAAGCTGGATCGAAGAAA+TGG | 0.436510 | 2.3:-72124542 | MS.gene002355:CDS |
TTGAGGTATTCTAAAAGCTT+CGG | 0.437209 | 2.3:+72122470 | None:intergenic |
TTGAAGCTTGTTTGGATTGG+TGG | 0.446072 | 2.3:-72124171 | MS.gene002355:CDS |
GCACAGAACTCTGTGTCAAA+GGG | 0.448957 | 2.3:-72122786 | MS.gene002355:CDS |
TGTTCTGTGCTTATCTTGAA+AGG | 0.451673 | 2.3:-72124228 | MS.gene002355:CDS |
AGAGCAGCAATACATGATAA+AGG | 0.454792 | 2.3:-72123653 | MS.gene002355:CDS |
AAAACTAAGTTGGGATCCTC+TGG | 0.461657 | 2.3:-72124254 | MS.gene002355:CDS |
TTGTAACAGGATTGTTTGGC+TGG | 0.465255 | 2.3:-72125262 | MS.gene002355:intron |
GTATTGTGTTCAAGTGGTAT+TGG | 0.466768 | 2.3:-72121845 | MS.gene002355:CDS |
ATACCAGATTAGGAATTCTA+AGG | 0.467888 | 2.3:-72122091 | MS.gene002355:intron |
CTGTTTCTAGCTCTGCATGC+TGG | 0.468543 | 2.3:+72125158 | None:intergenic |
AGATGCTCTGATCTAGAATT+GGG | 0.475458 | 2.3:+72122305 | None:intergenic |
TTGTCAGGTAACTCGGTCAA+TGG | 0.476790 | 2.3:+72124754 | None:intergenic |
CCTTCGCTTACAATACTCTC+TGG | 0.479033 | 2.3:+72122713 | None:intergenic |
CAGTGCTTTGATCTGTCTTG+TGG | 0.480515 | 2.3:+72122540 | None:intergenic |
ATAGACTGTAGGAACAGTTA+AGG | 0.484995 | 2.3:+72124833 | None:intergenic |
TTAGAATTCCTAATCTGGTA+TGG | 0.487915 | 2.3:+72122093 | None:intergenic |
CTTATTGCTGTCATACTCGT+TGG | 0.494275 | 2.3:+72122421 | None:intergenic |
TGTGGTTCTCTGGAAGCAGA+TGG | 0.496122 | 2.3:+72121770 | None:intergenic |
AAACTGTTCTTTGAATAGTT+GGG | 0.497020 | 2.3:+72123775 | None:intergenic |
AGCACAGAACTCTGTGTCAA+AGG | 0.497022 | 2.3:-72122787 | MS.gene002355:CDS |
TCATGCCCTCCTTCAGAGCT+AGG | 0.498248 | 2.3:-72124607 | MS.gene002355:CDS |
GTAAGATGTTCTGTAGAGAC+AGG | 0.499703 | 2.3:+72122833 | None:intergenic |
GTGGGATGTCTTCCGGAGAC+AGG | 0.500947 | 2.3:-72122498 | MS.gene002355:CDS |
TGAAGCTTGTTTGGATTGGT+GGG | 0.502278 | 2.3:-72124170 | MS.gene002355:CDS |
GAGAGCAATACTTTCAGCAA+TGG | 0.504341 | 2.3:-72122614 | MS.gene002355:CDS |
GAATACATGAATCCGAGGTT+CGG | 0.506022 | 2.3:-72123710 | MS.gene002355:CDS |
AATGTATTCTGTTGCTCAGT+GGG | 0.508686 | 2.3:-72122516 | MS.gene002355:CDS |
CACTCAAAATGAGGTTAAGA+AGG | 0.510187 | 2.3:-72125444 | None:intergenic |
CATAAGAAATGTATACATAT+GGG | 0.512294 | 2.3:+72123630 | None:intergenic |
GGTCTTTACACTGACTTGCT+CGG | 0.516495 | 2.3:+72125381 | None:intergenic |
CTTCTGTGAAGATTCAGAAT+AGG | 0.519354 | 2.3:+72124859 | None:intergenic |
GAAGCTATCATCATTCCTGC+TGG | 0.521605 | 2.3:-72122120 | MS.gene002355:CDS |
TCATACTTCGGAGCACGTCT+CGG | 0.522864 | 2.3:+72124278 | None:intergenic |
CTGGTACAAGCAGAGTTGAT+AGG | 0.525136 | 2.3:-72125243 | MS.gene002355:CDS |
TGGAGAATTTATATGCTCAA+AGG | 0.536643 | 2.3:+72124774 | None:intergenic |
ATTACTTCAGCAAAATGAGC+TGG | 0.538244 | 2.3:+72123752 | None:intergenic |
CCACAACCACCTAGCTCTGA+AGG | 0.546033 | 2.3:+72124598 | None:intergenic |
AGCACGTCTCGGACTACTAC+AGG | 0.549686 | 2.3:+72124289 | None:intergenic |
GCTTCGGTACATCCTGTCTC+CGG | 0.550177 | 2.3:+72122486 | None:intergenic |
GGATTCATGTATTCTTGAAG+TGG | 0.553713 | 2.3:+72123719 | None:intergenic |
GAAAATGGCTCTTCATAGCA+TGG | 0.555007 | 2.3:-72121601 | MS.gene002355:CDS |
TCAATGTTGCTGGATTCGAC+TGG | 0.558744 | 2.3:-72124655 | MS.gene002355:CDS |
TGGACGTTTGAGCAACATGT+TGG | 0.562317 | 2.3:-72122144 | MS.gene002355:CDS |
TAGAATACCTCAAAAGACAC+AGG | 0.568733 | 2.3:-72122460 | MS.gene002355:CDS |
ACTTTCAGCAATGGAGAATG+TGG | 0.568846 | 2.3:-72122605 | MS.gene002355:CDS |
GATCGAAGAAATGGAAGCTA+AGG | 0.571565 | 2.3:-72124533 | MS.gene002355:CDS |
ATCTGGTATGGACATCCAGC+AGG | 0.572299 | 2.3:+72122105 | None:intergenic |
CTTTGATCTGTCTTGTGGAA+AGG | 0.572886 | 2.3:+72122545 | None:intergenic |
CAATTGATGTCGAAAACTGT+AGG | 0.580782 | 2.3:+72124355 | None:intergenic |
ATTGACTCTCCTGTAAAAGT+CGG | 0.580898 | 2.3:+72122688 | None:intergenic |
ACATGTTGCTCAAACGTCCA+TGG | 0.584025 | 2.3:+72122147 | None:intergenic |
TACTCACAAAATGAGACTGA+AGG | 0.605524 | 2.3:-72122272 | MS.gene002355:CDS |
AGCTTGTTTGGATTGGTGGG+AGG | 0.607427 | 2.3:-72124167 | MS.gene002355:intron |
AGACGCTGAAACTAAATGGA+TGG | 0.607729 | 2.3:-72123805 | MS.gene002355:CDS |
AGCAAAAGTAGACAAGATTG+AGG | 0.607925 | 2.3:-72121746 | MS.gene002355:intron |
ACTGCATTGAGAAAATTGAC+TGG | 0.613125 | 2.3:-72124989 | MS.gene002355:intron |
TTAGCTGCAAATATGACAGA+GGG | 0.613711 | 2.3:-72123677 | MS.gene002355:CDS |
ACATCTTAAGCATAGACTGT+AGG | 0.615809 | 2.3:+72124822 | None:intergenic |
CTCTTATGACTCGTATGATG+CGG | 0.617432 | 2.3:-72123570 | MS.gene002355:intron |
CCAGAGAGTATTGTAAGCGA+AGG | 0.628849 | 2.3:-72122713 | MS.gene002355:CDS |
CCTGCAGTATTGTGTTCAAG+TGG | 0.641105 | 2.3:-72121851 | MS.gene002355:intron |
AACCACCTAGCTCTGAAGGA+GGG | 0.641948 | 2.3:+72124602 | None:intergenic |
TACTGAAAATGCAGAAGACG+CGG | 0.642017 | 2.3:-72122747 | MS.gene002355:CDS |
TTCAAGAATACATGAATCCG+AGG | 0.642282 | 2.3:-72123715 | MS.gene002355:CDS |
CAACCACCTAGCTCTGAAGG+AGG | 0.643011 | 2.3:+72124601 | None:intergenic |
TGCCCTCCTTCAGAGCTAGG+TGG | 0.645107 | 2.3:-72124604 | MS.gene002355:CDS |
TGTTGTCAGACATTAAGTCA+AGG | 0.648902 | 2.3:-72124802 | MS.gene002355:CDS |
CACAGAACTCTGTGTCAAAG+GGG | 0.648989 | 2.3:-72122785 | MS.gene002355:CDS |
GCTCTCTTAAATATCAACCT+CGG | 0.654056 | 2.3:-72123844 | MS.gene002355:CDS |
TCATTCCAGAAATCGAACCA+TGG | 0.660202 | 2.3:-72122164 | MS.gene002355:intron |
AGAATACCTCAAAAGACACA+GGG | 0.667044 | 2.3:-72122459 | MS.gene002355:CDS |
GAGAATTTATATGCTCAAAG+GGG | 0.668555 | 2.3:+72124776 | None:intergenic |
AAATGTATTCTGTTGCTCAG+TGG | 0.670307 | 2.3:-72122517 | MS.gene002355:CDS |
TTTAGCTGCAAATATGACAG+AGG | 0.672392 | 2.3:-72123678 | MS.gene002355:CDS |
CGTCTCGGACTACTACAGGA+TGG | 0.673684 | 2.3:+72124293 | None:intergenic |
AAATTCAGAAGACCGAACCT+CGG | 0.675191 | 2.3:+72123698 | None:intergenic |
AAGGCGTGTCCAGTTTGTCG+AGG | 0.678559 | 2.3:-72125425 | MS.gene002355:CDS |
TGTAGAGACAGGAATATCTG+TGG | 0.680529 | 2.3:+72122844 | None:intergenic |
ACAGAACTCTGTGTCAAAGG+GGG | 0.691218 | 2.3:-72122784 | MS.gene002355:CDS |
TCACAAAATGAGACTGAAGG+AGG | 0.693419 | 2.3:-72122269 | MS.gene002355:CDS |
TAAGCACAGAACAAGACCAG+AGG | 0.721315 | 2.3:+72124238 | None:intergenic |
TAGCTGCAAATATGACAGAG+GGG | 0.735019 | 2.3:-72123676 | MS.gene002355:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGAAAGTAAAAAAAAATTA+AGG | + | chr2.3:72123507-72123526 | None:intergenic | 10.0% |
!! | TATGTTCTTAATAATTATAA+TGG | - | chr2.3:72123023-72123042 | MS.gene002355:intron | 10.0% |
!! | AGTCAATCTATTTATATTAT+AGG | + | chr2.3:72124794-72124813 | None:intergenic | 15.0% |
!! | GTAAAAAAAAATTAAGGTTT+AGG | + | chr2.3:72123501-72123520 | None:intergenic | 15.0% |
!! | TTATATTATAGGAATATGAT+AGG | + | chr2.3:72124783-72124802 | None:intergenic | 15.0% |
!!! | ATTGCTAAAGTATATTATTT+TGG | - | chr2.3:72123069-72123088 | MS.gene002355:intron | 15.0% |
!!! | TCAAATTTTACATTTGTTTT+TGG | - | chr2.3:72123818-72123837 | MS.gene002355:CDS | 15.0% |
!! | AAATACTAATTATGTTAGCA+AGG | + | chr2.3:72122071-72122090 | None:intergenic | 20.0% |
!! | AAATGCATAAAATATGATCA+TGG | + | chr2.3:72123606-72123625 | None:intergenic | 20.0% |
!! | AAGTATGAAAAAACTAAGTT+GGG | - | chr2.3:72122721-72122740 | MS.gene002355:CDS | 20.0% |
!! | AATGCATAAAATATGATCAT+GGG | + | chr2.3:72123605-72123624 | None:intergenic | 20.0% |
!! | ATAATAGAATTGAACAAACA+AGG | + | chr2.3:72123002-72123021 | None:intergenic | 20.0% |
!! | ATTATCAATAGCAATAACTA+TGG | + | chr2.3:72122954-72122973 | None:intergenic | 20.0% |
!! | CATAAGAAATGTATACATAT+GGG | + | chr2.3:72123357-72123376 | None:intergenic | 20.0% |
!! | GTGTTATCTAAATCAAAATT+GGG | + | chr2.3:72125060-72125079 | None:intergenic | 20.0% |
!! | TATAAACCATAATATTAACC+TGG | + | chr2.3:72124120-72124139 | None:intergenic | 20.0% |
!! | TGTGTTATCTAAATCAAAAT+TGG | + | chr2.3:72125061-72125080 | None:intergenic | 20.0% |
!! | TTTCCTTATTATAACTTAAG+AGG | - | chr2.3:72123772-72123791 | MS.gene002355:CDS | 20.0% |
!!! | AACTTAGTTTTTTCATACTT+CGG | + | chr2.3:72122721-72122740 | None:intergenic | 20.0% |
!!! | ATACTTTAGCAATGTTTTTT+TGG | + | chr2.3:72123062-72123081 | None:intergenic | 20.0% |
!!! | ATATGATTTTATGTTTGACA+GGG | - | chr2.3:72121932-72121951 | MS.gene002355:intron | 20.0% |
!!! | ATTTTATCTTGTTTTGTAAC+AGG | - | chr2.3:72121709-72121728 | MS.gene002355:intron | 20.0% |
!!! | GATATTGCATTTTCATTATT+TGG | - | chr2.3:72121763-72121782 | MS.gene002355:CDS | 20.0% |
!!! | TAGTTATTGCTATTGATAAT+TGG | - | chr2.3:72122954-72122973 | MS.gene002355:intron | 20.0% |
!!! | TATATGATTTTATGTTTGAC+AGG | - | chr2.3:72121931-72121950 | MS.gene002355:intron | 20.0% |
!!! | TGATAGTTTTTTTTCTTTAG+CGG | - | chr2.3:72121669-72121688 | MS.gene002355:intron | 20.0% |
! | AAAAATATGTACAAGGAACA+GGG | + | chr2.3:72123722-72123741 | None:intergenic | 25.0% |
! | AAAATATGATCATGGGAATT+CGG | + | chr2.3:72123598-72123617 | None:intergenic | 25.0% |
! | AAACTGTTCTTTGAATAGTT+GGG | + | chr2.3:72123212-72123231 | None:intergenic | 25.0% |
! | AACAATAATATAAGATGCAG+CGG | + | chr2.3:72123799-72123818 | None:intergenic | 25.0% |
! | AATAGTGATTCCAAATACAA+CGG | - | chr2.3:72123541-72123560 | MS.gene002355:intron | 25.0% |
! | ATGATTCAACCATTGAATAA+TGG | + | chr2.3:72123992-72124011 | None:intergenic | 25.0% |
! | CCATAAGAAATGTATACATA+TGG | + | chr2.3:72123358-72123377 | None:intergenic | 25.0% |
! | CCATATGTATACATTTCTTA+TGG | - | chr2.3:72123355-72123374 | MS.gene002355:intron | 25.0% |
! | GAAGTATGAAAAAACTAAGT+TGG | - | chr2.3:72122720-72122739 | MS.gene002355:CDS | 25.0% |
! | TCAAGAACAGTTGAAATATT+TGG | + | chr2.3:72124984-72125003 | None:intergenic | 25.0% |
!! | GAGTTTTTATCCAAAATTTC+AGG | + | chr2.3:72122506-72122525 | None:intergenic | 25.0% |
!! | TATGATTTTATGTTTGACAG+GGG | - | chr2.3:72121933-72121952 | MS.gene002355:intron | 25.0% |
!! | TATTGATAATTGGAATGCAT+TGG | - | chr2.3:72122964-72122983 | MS.gene002355:intron | 25.0% |
!!! | TCGCTTATTTGTTTTATTAC+CGG | + | chr2.3:72121803-72121822 | None:intergenic | 25.0% |
!!! | TTATTTGTTTTATTACCGGA+AGG | + | chr2.3:72121799-72121818 | None:intergenic | 25.0% |
AAATGCTCTTGTCTTCTAAA+AGG | + | chr2.3:72122286-72122305 | None:intergenic | 30.0% | |
AATTATCTGACGAAGTACAA+TGG | + | chr2.3:72124053-72124072 | None:intergenic | 30.0% | |
ACAATAATATAAGATGCAGC+GGG | + | chr2.3:72123798-72123817 | None:intergenic | 30.0% | |
ACTCAAACAAGATCATGTTA+AGG | + | chr2.3:72124619-72124638 | None:intergenic | 30.0% | |
ACTTCGAAATTATACACTTC+TGG | - | chr2.3:72125010-72125029 | MS.gene002355:CDS | 30.0% | |
ATACCAGATTAGGAATTCTA+AGG | - | chr2.3:72124893-72124912 | MS.gene002355:intron | 30.0% | |
ATGAAAACAGGTGAAGAAAA+TGG | - | chr2.3:72125368-72125387 | MS.gene002355:intron | 30.0% | |
CAAAAATATGTACAAGGAAC+AGG | + | chr2.3:72123723-72123742 | None:intergenic | 30.0% | |
GAAAAACACATCTCAAATCA+AGG | + | chr2.3:72122421-72122440 | None:intergenic | 30.0% | |
GAAACAGAAGCGAAAAATAA+AGG | - | chr2.3:72121842-72121861 | MS.gene002355:CDS | 30.0% | |
GAAACTGTTCTTTGAATAGT+TGG | + | chr2.3:72123213-72123232 | None:intergenic | 30.0% | |
GAGAATTTATATGCTCAAAG+GGG | + | chr2.3:72122211-72122230 | None:intergenic | 30.0% | |
GATAGGTGATACAAATACAT+GGG | + | chr2.3:72124766-72124785 | None:intergenic | 30.0% | |
GCATTTATCTTGTGATAACT+CGG | - | chr2.3:72123620-72123639 | MS.gene002355:CDS | 30.0% | |
GGAGAATTTATATGCTCAAA+GGG | + | chr2.3:72122212-72122231 | None:intergenic | 30.0% | |
GTGATTCCAGGTTAATATTA+TGG | - | chr2.3:72124111-72124130 | MS.gene002355:intron | 30.0% | |
TCATAGAAGAAAGCAAGAAT+TGG | + | chr2.3:72125305-72125324 | None:intergenic | 30.0% | |
TGAACACTTTCAAAAACACT+GGG | - | chr2.3:72122661-72122680 | MS.gene002355:CDS | 30.0% | |
TGATAGGTGATACAAATACA+TGG | + | chr2.3:72124767-72124786 | None:intergenic | 30.0% | |
TGGAGAATTTATATGCTCAA+AGG | + | chr2.3:72122213-72122232 | None:intergenic | 30.0% | |
TTAGAATTCCTAATCTGGTA+TGG | + | chr2.3:72124894-72124913 | None:intergenic | 30.0% | |
TTGAACACTTTCAAAAACAC+TGG | - | chr2.3:72122660-72122679 | MS.gene002355:CDS | 30.0% | |
TTTCTTGAATATATCTGCTC+TGG | - | chr2.3:72123464-72123483 | MS.gene002355:intron | 30.0% | |
! | AACATTAGACAGCATTTTAC+TGG | - | chr2.3:72123118-72123137 | MS.gene002355:intron | 30.0% |
! | CTATGAAGTTCCTGAAATTT+TGG | - | chr2.3:72122493-72122512 | MS.gene002355:CDS | 30.0% |
! | CTGTTCCTTGTACATATTTT+TGG | - | chr2.3:72123721-72123740 | MS.gene002355:CDS | 30.0% |
! | GCATTTTCAGTAGTAATCTT+CGG | + | chr2.3:72124229-72124248 | None:intergenic | 30.0% |
! | TACAAATACATGGGTTATTG+TGG | + | chr2.3:72124757-72124776 | None:intergenic | 30.0% |
! | TATGTATGATTTGTGATTCC+AGG | - | chr2.3:72124099-72124118 | MS.gene002355:intron | 30.0% |
! | TGTTTTGTAACAGGATTGTT+TGG | - | chr2.3:72121718-72121737 | MS.gene002355:intron | 30.0% |
! | TTGAGGTATTCTAAAAGCTT+CGG | + | chr2.3:72124517-72124536 | None:intergenic | 30.0% |
! | TTTGTCTCTTTTTGTCAAAC+TGG | - | chr2.3:72123960-72123979 | MS.gene002355:intron | 30.0% |
!!! | AGCAATGTTTTTTTGGTTCA+TGG | + | chr2.3:72123055-72123074 | None:intergenic | 30.0% |
!!! | TTATTTTGGAACTCTTACTC+TGG | - | chr2.3:72123083-72123102 | MS.gene002355:intron | 30.0% |
!!! | TTTTGGTCTTATTAGTCATG+TGG | - | chr2.3:72123835-72123854 | MS.gene002355:CDS | 30.0% |
AAATGTATTCTGTTGCTCAG+TGG | - | chr2.3:72124467-72124486 | MS.gene002355:CDS | 35.0% | |
AACACTTTCAAAAACACTGG+GGG | - | chr2.3:72122663-72122682 | MS.gene002355:CDS | 35.0% | |
AATGTATTCTGTTGCTCAGT+GGG | - | chr2.3:72124468-72124487 | MS.gene002355:CDS | 35.0% | |
ACATCTTAAGCATAGACTGT+AGG | + | chr2.3:72122165-72122184 | None:intergenic | 35.0% | |
ACTGCATTGAGAAAATTGAC+TGG | - | chr2.3:72121995-72122014 | MS.gene002355:intron | 35.0% | |
AGAAGAAAGCAAGAATTGGA+AGG | + | chr2.3:72125301-72125320 | None:intergenic | 35.0% | |
AGAATACCTCAAAAGACACA+GGG | - | chr2.3:72124525-72124544 | MS.gene002355:CDS | 35.0% | |
AGACCTTAGAATTCCTAATC+TGG | + | chr2.3:72124899-72124918 | None:intergenic | 35.0% | |
AGAGCAGCAATACATGATAA+AGG | - | chr2.3:72123331-72123350 | MS.gene002355:intron | 35.0% | |
AGCAAAAGTAGACAAGATTG+AGG | - | chr2.3:72125238-72125257 | MS.gene002355:CDS | 35.0% | |
ATAGACTGTAGGAACAGTTA+AGG | + | chr2.3:72122154-72122173 | None:intergenic | 35.0% | |
ATCAACCTCGGAAAAATGAT+TGG | - | chr2.3:72123152-72123171 | MS.gene002355:intron | 35.0% | |
ATTACTTCAGCAAAATGAGC+TGG | + | chr2.3:72123235-72123254 | None:intergenic | 35.0% | |
ATTTCTTCGATCCAGCTTAT+GGG | + | chr2.3:72122443-72122462 | None:intergenic | 35.0% | |
CAATTGATGTCGAAAACTGT+AGG | + | chr2.3:72122632-72122651 | None:intergenic | 35.0% | |
CTTCTGTGAAGATTCAGAAT+AGG | + | chr2.3:72122128-72122147 | None:intergenic | 35.0% | |
GAACACTTTCAAAAACACTG+GGG | - | chr2.3:72122662-72122681 | MS.gene002355:CDS | 35.0% | |
GAAGTGTATTCCGTTGTATT+TGG | + | chr2.3:72123554-72123573 | None:intergenic | 35.0% | |
GATATCAGACCTTACTTTCA+CGG | + | chr2.3:72121627-72121646 | None:intergenic | 35.0% | |
GCTCTCTTAAATATCAACCT+CGG | - | chr2.3:72123140-72123159 | MS.gene002355:intron | 35.0% | |
GGATTCATGTATTCTTGAAG+TGG | + | chr2.3:72123268-72123287 | None:intergenic | 35.0% | |
GGGCCTCTTAAGTTATAATA+AGG | + | chr2.3:72123778-72123797 | None:intergenic | 35.0% | |
GTATTGTGTTCAAGTGGTAT+TGG | - | chr2.3:72125139-72125158 | MS.gene002355:intron | 35.0% | |
TACTCACAAAATGAGACTGA+AGG | - | chr2.3:72124712-72124731 | MS.gene002355:CDS | 35.0% | |
TAGAATACCTCAAAAGACAC+AGG | - | chr2.3:72124524-72124543 | MS.gene002355:CDS | 35.0% | |
TCTTGGAATGCTTCTTACTT+GGG | - | chr2.3:72123672-72123691 | MS.gene002355:CDS | 35.0% | |
TGTTCTGTGCTTATCTTGAA+AGG | - | chr2.3:72122756-72122775 | MS.gene002355:CDS | 35.0% | |
TGTTGTCAGACATTAAGTCA+AGG | - | chr2.3:72122182-72122201 | MS.gene002355:intron | 35.0% | |
TTAGCTGCAAATATGACAGA+GGG | - | chr2.3:72123307-72123326 | MS.gene002355:intron | 35.0% | |
TTCAAGAATACATGAATCCG+AGG | - | chr2.3:72123269-72123288 | MS.gene002355:intron | 35.0% | |
TTTAGCTGCAAATATGACAG+AGG | - | chr2.3:72123306-72123325 | MS.gene002355:intron | 35.0% | |
! | AAGATGCTCTGATCTAGAAT+TGG | + | chr2.3:72124683-72124702 | None:intergenic | 35.0% |
! | AGACTTACTTGAAGCTTGTT+TGG | - | chr2.3:72122805-72122824 | MS.gene002355:CDS | 35.0% |
! | AGATGCTCTGATCTAGAATT+GGG | + | chr2.3:72124682-72124701 | None:intergenic | 35.0% |
! | ATTGACTCTCCTGTAAAAGT+CGG | + | chr2.3:72124299-72124318 | None:intergenic | 35.0% |
! | GCTCATTTTGCTGAAGTAAT+TGG | - | chr2.3:72123235-72123254 | MS.gene002355:intron | 35.0% |
! | GGGTTTTCATCATATACAAG+TGG | + | chr2.3:72123702-72123721 | None:intergenic | 35.0% |
! | TAACTCGGTATCTCATCTTT+TGG | - | chr2.3:72123635-72123654 | MS.gene002355:CDS | 35.0% |
! | TACTTGAAGCTTGTTTGGAT+TGG | - | chr2.3:72122810-72122829 | MS.gene002355:CDS | 35.0% |
!! | TCTTGTCTACTTTTGCTTTG+TGG | + | chr2.3:72125235-72125254 | None:intergenic | 35.0% |
!! | TGGAATAAAAAGCATCCTCT+TGG | - | chr2.3:72123655-72123674 | MS.gene002355:CDS | 35.0% |
AAATTCAGAAGACCGAACCT+CGG | + | chr2.3:72123289-72123308 | None:intergenic | 40.0% | |
AACTGATACGTCAATGTTGC+TGG | - | chr2.3:72122319-72122338 | MS.gene002355:intron | 40.0% | |
ACTTTCAGCAATGGAGAATG+TGG | - | chr2.3:72124379-72124398 | MS.gene002355:CDS | 40.0% | |
AGACGCTGAAACTAAATGGA+TGG | - | chr2.3:72123179-72123198 | MS.gene002355:intron | 40.0% | |
CAACGAGTATGACAGCAATA+AGG | - | chr2.3:72124564-72124583 | MS.gene002355:CDS | 40.0% | |
CATAAGCTGGATCGAAGAAA+TGG | - | chr2.3:72122442-72122461 | MS.gene002355:CDS | 40.0% | |
CATGAGACGCTGAAACTAAA+TGG | - | chr2.3:72123175-72123194 | MS.gene002355:intron | 40.0% | |
CATTTCTTCGATCCAGCTTA+TGG | + | chr2.3:72122444-72122463 | None:intergenic | 40.0% | |
CTCTTATGACTCGTATGATG+CGG | - | chr2.3:72123414-72123433 | MS.gene002355:intron | 40.0% | |
CTCTTGGAATGCTTCTTACT+TGG | - | chr2.3:72123671-72123690 | MS.gene002355:CDS | 40.0% | |
CTTATTGCTGTCATACTCGT+TGG | + | chr2.3:72124566-72124585 | None:intergenic | 40.0% | |
CTTTGATCTGTCTTGTGGAA+AGG | + | chr2.3:72124442-72124461 | None:intergenic | 40.0% | |
GAAAATGGCTCTTCATAGCA+TGG | - | chr2.3:72125383-72125402 | MS.gene002355:CDS | 40.0% | |
GAATACATGAATCCGAGGTT+CGG | - | chr2.3:72123274-72123293 | MS.gene002355:intron | 40.0% | |
GAGAGCAATACTTTCAGCAA+TGG | - | chr2.3:72124370-72124389 | MS.gene002355:CDS | 40.0% | |
GATCGAAGAAATGGAAGCTA+AGG | - | chr2.3:72122451-72122470 | MS.gene002355:CDS | 40.0% | |
GATGGATCTCATCAGTCAAT+TGG | + | chr2.3:72125199-72125218 | None:intergenic | 40.0% | |
GCTCGCCAAAAATATGTACA+AGG | + | chr2.3:72123729-72123748 | None:intergenic | 40.0% | |
GTAAGATGTTCTGTAGAGAC+AGG | + | chr2.3:72124154-72124173 | None:intergenic | 40.0% | |
GTGTAAAGACCGTGAAAGTA+AGG | - | chr2.3:72121615-72121634 | MS.gene002355:intron | 40.0% | |
TACTGAAAATGCAGAAGACG+CGG | - | chr2.3:72124237-72124256 | MS.gene002355:CDS | 40.0% | |
TAGCTGCAAATATGACAGAG+GGG | - | chr2.3:72123308-72123327 | MS.gene002355:intron | 40.0% | |
TATCTGACGAAGTACAATGG+AGG | + | chr2.3:72124050-72124069 | None:intergenic | 40.0% | |
TCACAAAATGAGACTGAAGG+AGG | - | chr2.3:72124715-72124734 | MS.gene002355:CDS | 40.0% | |
TCATTCCAGAAATCGAACCA+TGG | - | chr2.3:72124820-72124839 | MS.gene002355:CDS | 40.0% | |
TCTTTCGTGCACATGAAAAC+AGG | - | chr2.3:72125356-72125375 | MS.gene002355:intron | 40.0% | |
TGGCGTGTACCATTATTCAA+TGG | - | chr2.3:72123980-72123999 | MS.gene002355:intron | 40.0% | |
TGTAGAGACAGGAATATCTG+TGG | + | chr2.3:72124143-72124162 | None:intergenic | 40.0% | |
TTGTAACAGGATTGTTTGGC+TGG | - | chr2.3:72121722-72121741 | MS.gene002355:intron | 40.0% | |
TTTCAAAAACACTGGGGGAA+AGG | - | chr2.3:72122668-72122687 | MS.gene002355:CDS | 40.0% | |
! | AAAACTAAGTTGGGATCCTC+TGG | - | chr2.3:72122730-72122749 | MS.gene002355:CDS | 40.0% |
! | ACTTTTGCTTTGTGGTTCTC+TGG | + | chr2.3:72125227-72125246 | None:intergenic | 40.0% |
! | ATGCAAGTGTCCATTTTGTC+AGG | + | chr2.3:72122248-72122267 | None:intergenic | 40.0% |
! | ATTCATCCCTGTGTCTTTTG+AGG | + | chr2.3:72124534-72124553 | None:intergenic | 40.0% |
! | GATGTGTTTTTCCCATAAGC+TGG | - | chr2.3:72122429-72122448 | MS.gene002355:CDS | 40.0% |
! | GTCCATTTTGTCAGGTAACT+CGG | + | chr2.3:72122240-72122259 | None:intergenic | 40.0% |
! | TCTAGATCAGAGCATCTTTC+TGG | - | chr2.3:72124685-72124704 | MS.gene002355:CDS | 40.0% |
! | TTGAAGCTTGTTTGGATTGG+TGG | - | chr2.3:72122813-72122832 | MS.gene002355:CDS | 40.0% |
!! | ATGGAGTACTGCTATTTGAC+AGG | + | chr2.3:72124026-72124045 | None:intergenic | 40.0% |
!! | CAAGTAAGAAGCATTCCAAG+AGG | + | chr2.3:72123673-72123692 | None:intergenic | 40.0% |
!! | TCATGCCAATCATTTTTCCG+AGG | + | chr2.3:72123160-72123179 | None:intergenic | 40.0% |
!! | TGAAGCTTGTTTGGATTGGT+GGG | - | chr2.3:72122814-72122833 | MS.gene002355:CDS | 40.0% |
!!! | CTGGATTCGACTGGTTTTAA+CGG | - | chr2.3:72122338-72122357 | MS.gene002355:intron | 40.0% |
AACGTCCATGGTTCGATTTC+TGG | + | chr2.3:72124828-72124847 | None:intergenic | 45.0% | |
ACAGAACTCTGTGTCAAAGG+GGG | - | chr2.3:72124200-72124219 | MS.gene002355:CDS | 45.0% | |
ACATGTTGCTCAAACGTCCA+TGG | + | chr2.3:72124840-72124859 | None:intergenic | 45.0% | |
AGCAATGGAGAATGTGGTTC+TGG | - | chr2.3:72124385-72124404 | MS.gene002355:CDS | 45.0% | |
AGCACAGAACTCTGTGTCAA+AGG | - | chr2.3:72124197-72124216 | MS.gene002355:CDS | 45.0% | |
ATGAGACTGAAGGAGGAGTT+TGG | - | chr2.3:72124722-72124741 | MS.gene002355:CDS | 45.0% | |
CACAGAACTCTGTGTCAAAG+GGG | - | chr2.3:72124199-72124218 | MS.gene002355:CDS | 45.0% | |
CAGTGCTTTGATCTGTCTTG+TGG | + | chr2.3:72124447-72124466 | None:intergenic | 45.0% | |
CCACTTGAACACAATACTGC+AGG | + | chr2.3:72125136-72125155 | None:intergenic | 45.0% | |
CCTGCAGTATTGTGTTCAAG+TGG | - | chr2.3:72125133-72125152 | MS.gene002355:intron | 45.0% | |
CCTTCGCTTACAATACTCTC+TGG | + | chr2.3:72124274-72124293 | None:intergenic | 45.0% | |
CTGGATGTCCATACCAGATT+AGG | - | chr2.3:72124883-72124902 | MS.gene002355:intron | 45.0% | |
GAACAAGTTCCTCGACAAAC+TGG | + | chr2.3:72121571-72121590 | None:intergenic | 45.0% | |
GAAGCTATCATCATTCCTGC+TGG | - | chr2.3:72124864-72124883 | MS.gene002355:CDS | 45.0% | |
GACCGAGTTACCTGACAAAA+TGG | - | chr2.3:72122235-72122254 | MS.gene002355:intron | 45.0% | |
GCACAGAACTCTGTGTCAAA+GGG | - | chr2.3:72124198-72124217 | MS.gene002355:CDS | 45.0% | |
GGCTCTTCATAGCATGGATA+TGG | - | chr2.3:72125389-72125408 | MS.gene002355:CDS | 45.0% | |
TAAGCACAGAACAAGACCAG+AGG | + | chr2.3:72122749-72122768 | None:intergenic | 45.0% | |
TCAATGTTGCTGGATTCGAC+TGG | - | chr2.3:72122329-72122348 | MS.gene002355:intron | 45.0% | |
TGGACGTTTGAGCAACATGT+TGG | - | chr2.3:72124840-72124859 | MS.gene002355:CDS | 45.0% | |
TTGTCAGGTAACTCGGTCAA+TGG | + | chr2.3:72122233-72122252 | None:intergenic | 45.0% | |
TTTGGTCTGTATGCTCCTTC+CGG | - | chr2.3:72121781-72121800 | MS.gene002355:CDS | 45.0% | |
! | CTGGTACAAGCAGAGTTGAT+AGG | - | chr2.3:72121741-72121760 | MS.gene002355:intron | 45.0% |
! | TTTGGAACTCTTACTCTGGC+AGG | - | chr2.3:72123087-72123106 | MS.gene002355:intron | 45.0% |
!! | CCAGAGAGTATTGTAAGCGA+AGG | - | chr2.3:72124271-72124290 | MS.gene002355:CDS | 45.0% |
!! | GGTCTTTACACTGACTTGCT+CGG | + | chr2.3:72121606-72121625 | None:intergenic | 45.0% |
ATCTGGTATGGACATCCAGC+AGG | + | chr2.3:72124882-72124901 | None:intergenic | 50.0% | |
GACGAAGTACAATGGAGGCA+TGG | + | chr2.3:72124045-72124064 | None:intergenic | 50.0% | |
TCATACTTCGGAGCACGTCT+CGG | + | chr2.3:72122709-72122728 | None:intergenic | 50.0% | |
TGCAGAAGACGCGGAACAAA+AGG | - | chr2.3:72124246-72124265 | MS.gene002355:CDS | 50.0% | |
TTGCTCAGTGGGATGTCTTC+CGG | - | chr2.3:72124479-72124498 | MS.gene002355:CDS | 50.0% | |
! | TGTGGTTCTCTGGAAGCAGA+TGG | + | chr2.3:72125217-72125236 | None:intergenic | 50.0% |
!! | AACCACCTAGCTCTGAAGGA+GGG | + | chr2.3:72122385-72122404 | None:intergenic | 50.0% |
!! | AGCTTGTTTGGATTGGTGGG+AGG | - | chr2.3:72122817-72122836 | MS.gene002355:CDS | 50.0% |
!! | CTGTTTCTAGCTCTGCATGC+TGG | + | chr2.3:72121829-72121848 | None:intergenic | 50.0% |
!! | GCGAAGGAACCGACTTTTAC+AGG | - | chr2.3:72124287-72124306 | MS.gene002355:CDS | 50.0% |
AAGGCGTGTCCAGTTTGTCG+AGG | - | chr2.3:72121559-72121578 | MS.gene002355:CDS | 55.0% | |
AGCACGTCTCGGACTACTAC+AGG | + | chr2.3:72122698-72122717 | None:intergenic | 55.0% | |
CCTTCAGAGCTAGGTGGTTG+TGG | - | chr2.3:72122386-72122405 | MS.gene002355:intron | 55.0% | |
CGTCTCGGACTACTACAGGA+TGG | + | chr2.3:72122694-72122713 | None:intergenic | 55.0% | |
GCTTCGGTACATCCTGTCTC+CGG | + | chr2.3:72124501-72124520 | None:intergenic | 55.0% | |
TCATGCCCTCCTTCAGAGCT+AGG | - | chr2.3:72122377-72122396 | MS.gene002355:intron | 55.0% | |
!! | CAACCACCTAGCTCTGAAGG+AGG | + | chr2.3:72122386-72122405 | None:intergenic | 55.0% |
!! | CCACAACCACCTAGCTCTGA+AGG | + | chr2.3:72122389-72122408 | None:intergenic | 55.0% |
GTGGGATGTCTTCCGGAGAC+AGG | - | chr2.3:72124486-72124505 | MS.gene002355:CDS | 60.0% | |
TGCCCTCCTTCAGAGCTAGG+TGG | - | chr2.3:72122380-72122399 | MS.gene002355:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 72121548 | 72125458 | 72121548 | ID=MS.gene002355 |
chr2.3 | mRNA | 72121548 | 72125458 | 72121548 | ID=MS.gene002355.t1;Parent=MS.gene002355 |
chr2.3 | exon | 72125375 | 72125458 | 72125375 | ID=MS.gene002355.t1.exon1;Parent=MS.gene002355.t1 |
chr2.3 | CDS | 72125375 | 72125458 | 72125375 | ID=cds.MS.gene002355.t1;Parent=MS.gene002355.t1 |
chr2.3 | exon | 72125143 | 72125275 | 72125143 | ID=MS.gene002355.t1.exon2;Parent=MS.gene002355.t1 |
chr2.3 | CDS | 72125143 | 72125275 | 72125143 | ID=cds.MS.gene002355.t1;Parent=MS.gene002355.t1 |
chr2.3 | exon | 72124990 | 72125053 | 72124990 | ID=MS.gene002355.t1.exon3;Parent=MS.gene002355.t1 |
chr2.3 | CDS | 72124990 | 72125053 | 72124990 | ID=cds.MS.gene002355.t1;Parent=MS.gene002355.t1 |
chr2.3 | exon | 72124168 | 72124897 | 72124168 | ID=MS.gene002355.t1.exon4;Parent=MS.gene002355.t1 |
chr2.3 | CDS | 72124168 | 72124897 | 72124168 | ID=cds.MS.gene002355.t1;Parent=MS.gene002355.t1 |
chr2.3 | exon | 72123571 | 72123897 | 72123571 | ID=MS.gene002355.t1.exon5;Parent=MS.gene002355.t1 |
chr2.3 | CDS | 72123571 | 72123897 | 72123571 | ID=cds.MS.gene002355.t1;Parent=MS.gene002355.t1 |
chr2.3 | exon | 72122421 | 72122885 | 72122421 | ID=MS.gene002355.t1.exon6;Parent=MS.gene002355.t1 |
chr2.3 | CDS | 72122421 | 72122885 | 72122421 | ID=cds.MS.gene002355.t1;Parent=MS.gene002355.t1 |
chr2.3 | exon | 72122263 | 72122335 | 72122263 | ID=MS.gene002355.t1.exon7;Parent=MS.gene002355.t1 |
chr2.3 | CDS | 72122263 | 72122335 | 72122263 | ID=cds.MS.gene002355.t1;Parent=MS.gene002355.t1 |
chr2.3 | exon | 72122092 | 72122177 | 72122092 | ID=MS.gene002355.t1.exon8;Parent=MS.gene002355.t1 |
chr2.3 | CDS | 72122092 | 72122177 | 72122092 | ID=cds.MS.gene002355.t1;Parent=MS.gene002355.t1 |
chr2.3 | exon | 72121747 | 72121866 | 72121747 | ID=MS.gene002355.t1.exon9;Parent=MS.gene002355.t1 |
chr2.3 | CDS | 72121747 | 72121866 | 72121747 | ID=cds.MS.gene002355.t1;Parent=MS.gene002355.t1 |
chr2.3 | exon | 72121548 | 72121628 | 72121548 | ID=MS.gene002355.t1.exon10;Parent=MS.gene002355.t1 |
chr2.3 | CDS | 72121548 | 72121628 | 72121548 | ID=cds.MS.gene002355.t1;Parent=MS.gene002355.t1 |
Gene Sequence |
Protein sequence |