AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene002434

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002434.t1 MTR_2g013370 91.697 277 19 2 1 276 1 274 6.50e-173 478
MS.gene002434.t1 MTR_4g089095 55.016 309 95 12 1 276 1 298 8.49e-85 256
MS.gene002434.t1 MTR_4g089095 54.962 262 78 10 44 276 14 264 2.47e-72 223
MS.gene002434.t1 MTR_2g096740 46.212 132 58 4 46 176 77 196 1.34e-28 111
MS.gene002434.t1 MTR_2g096740 46.212 132 58 4 46 176 62 181 1.34e-28 110
MS.gene002434.t1 MTR_3g091820 66.197 71 23 1 30 99 27 97 1.35e-28 111
MS.gene002434.t1 MTR_4g088580 63.415 82 29 1 48 128 57 138 1.44e-28 112
MS.gene002434.t1 MTR_8g479350 59.036 83 31 2 39 120 63 143 2.31e-28 111
MS.gene002434.t1 MTR_8g079060 58.750 80 27 3 44 121 27 102 7.50e-27 104
MS.gene002434.t1 MTR_7g024670 67.568 74 19 2 38 106 69 142 9.06e-27 107
MS.gene002434.t1 MTR_8g027295 58.108 74 30 1 28 100 6 79 1.37e-26 105
MS.gene002434.t1 MTR_2g093220 77.193 57 12 1 44 99 38 94 2.17e-26 105
MS.gene002434.t1 MTR_4g063780 55.682 88 33 2 45 127 74 160 2.49e-26 105
MS.gene002434.t1 MTR_2g014170 83.673 49 8 0 45 93 44 92 2.65e-26 105
MS.gene002434.t1 MTR_8g068210 60.870 69 26 1 40 107 26 94 2.84e-26 105
MS.gene002434.t1 MTR_4g022370 53.846 91 34 2 45 127 81 171 4.61e-26 105
MS.gene002434.t1 MTR_8g015840 60.811 74 22 1 20 93 1 67 5.15e-26 102
MS.gene002434.t1 MTR_1g077600 59.420 69 27 1 32 99 29 97 7.53e-26 103
MS.gene002434.t1 MTR_1g077600 59.420 69 27 1 32 99 29 97 7.58e-26 103
MS.gene002434.t1 MTR_4g461080 77.193 57 12 1 42 97 25 81 1.32e-25 102
MS.gene002434.t1 MTR_3g090430 74.138 58 14 1 45 101 50 107 1.94e-25 103
MS.gene002434.t1 MTR_7g059400 79.245 53 10 1 48 99 78 130 1.98e-25 103
MS.gene002434.t1 MTR_4g109980 80.000 50 10 0 44 93 38 87 4.62e-25 102
MS.gene002434.t1 MTR_2g059540 79.592 49 10 0 45 93 30 78 1.05e-24 98.6
MS.gene002434.t1 MTR_1g056810 56.627 83 35 1 47 128 13 95 1.11e-24 100
MS.gene002434.t1 MTR_3g435480 45.455 99 54 0 48 146 138 236 7.38e-24 100
MS.gene002434.t1 MTR_3g077750 46.789 109 41 4 1 93 1 108 3.57e-23 97.1
MS.gene002434.t1 MTR_5g031440 75.000 48 12 0 46 93 43 90 4.07e-23 97.1
MS.gene002434.t1 MTR_7g010950 74.074 54 13 1 46 98 135 188 1.04e-22 97.4
MS.gene002434.t1 MTR_6g027460 54.118 85 35 2 46 129 96 177 1.42e-22 95.9
MS.gene002434.t1 MTR_4g082060 66.102 59 19 1 46 103 122 180 1.53e-22 96.7
MS.gene002434.t1 MTR_2g014060 78.261 46 10 0 48 93 27 72 2.76e-22 94.7
MS.gene002434.t1 MTR_6g027450 67.857 56 17 1 46 100 89 144 2.85e-22 94.7
MS.gene002434.t1 MTR_2g016030 62.963 54 20 0 46 99 47 100 6.09e-22 90.1
MS.gene002434.t1 MTR_7g086780 67.857 56 17 1 46 100 99 154 6.75e-22 94.7
MS.gene002434.t1 MTR_6g012450 73.077 52 13 1 48 98 138 189 7.63e-22 95.1
MS.gene002434.t1 MTR_5g041420 58.209 67 27 1 33 98 125 191 1.91e-21 92.0
MS.gene002434.t1 MTR_8g044220 49.333 75 37 1 48 121 120 194 2.75e-21 93.2
MS.gene002434.t1 MTR_5g041380 34.014 147 70 3 48 194 129 248 5.35e-20 89.0
MS.gene002434.t1 MTR_5g041530 58.209 67 27 1 33 98 127 193 7.72e-20 88.6
MS.gene002434.t1 MTR_5g041400 69.231 52 15 1 48 98 121 172 9.93e-20 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002434.t1 AT1G28310 65.060 83 28 1 20 101 1 83 4.24e-29 112
MS.gene002434.t1 AT1G28310 65.060 83 28 1 20 101 25 107 8.31e-29 112
MS.gene002434.t1 AT1G51700 38.750 160 85 4 33 179 16 175 9.31e-28 106
MS.gene002434.t1 AT5G66940 60.274 73 27 1 42 112 28 100 1.12e-27 107
MS.gene002434.t1 AT5G60850 59.770 87 31 2 34 116 36 122 2.02e-27 108
MS.gene002434.t1 AT3G55370 66.667 66 21 1 45 109 75 140 2.89e-27 108
MS.gene002434.t1 AT5G60200 57.447 94 32 3 19 111 32 118 2.90e-27 106
MS.gene002434.t1 AT3G55370 66.667 66 21 1 45 109 75 140 3.19e-27 108
MS.gene002434.t1 AT3G55370 66.667 66 21 1 45 109 120 185 3.66e-27 108
MS.gene002434.t1 AT3G61850 75.439 57 13 1 44 99 60 116 2.18e-26 104
MS.gene002434.t1 AT3G61850 75.439 57 13 1 44 99 60 116 2.18e-26 104
MS.gene002434.t1 AT2G28510 77.193 57 12 1 44 99 46 102 2.58e-26 104
MS.gene002434.t1 AT3G61850 75.439 57 13 1 44 99 72 128 2.66e-26 105
MS.gene002434.t1 AT3G61850 75.439 57 13 1 44 99 60 116 3.52e-26 105
MS.gene002434.t1 AT3G50410 64.789 71 18 2 30 99 20 84 4.18e-26 103
MS.gene002434.t1 AT3G45610 44.538 119 53 3 21 133 22 133 4.22e-26 103
MS.gene002434.t1 AT3G61850 75.439 57 13 1 44 99 72 128 4.24e-26 105
MS.gene002434.t1 AT2G37590 61.429 70 24 2 35 101 76 145 1.07e-25 103
MS.gene002434.t1 AT4G24060 73.684 57 14 1 44 99 51 107 1.60e-25 103
MS.gene002434.t1 AT1G64620 57.692 78 31 1 16 93 21 96 3.56e-25 102
MS.gene002434.t1 AT2G28810 77.551 49 11 0 45 93 76 124 3.89e-25 102
MS.gene002434.t1 AT1G07640 70.690 58 15 1 46 101 21 78 4.14e-25 101
MS.gene002434.t1 AT3G21270 79.245 53 10 1 46 97 29 81 5.18e-25 99.4
MS.gene002434.t1 AT2G28810 77.551 49 11 0 45 93 93 141 5.38e-25 102
MS.gene002434.t1 AT1G07640 70.690 58 15 1 46 101 77 134 6.40e-25 102
MS.gene002434.t1 AT4G38000 50.617 81 35 1 45 125 40 115 6.51e-25 100
MS.gene002434.t1 AT4G21050 66.129 62 20 1 48 108 26 87 6.82e-25 99.0
MS.gene002434.t1 AT5G02460 73.214 56 14 1 45 99 94 149 7.19e-25 102
MS.gene002434.t1 AT1G07640 70.690 58 15 1 46 101 85 142 7.49e-25 101
MS.gene002434.t1 AT1G21340 55.128 78 31 2 25 101 20 94 2.19e-24 99.0
MS.gene002434.t1 AT5G65590 61.111 72 24 2 29 99 27 95 2.21e-24 100
MS.gene002434.t1 AT2G46590 74.000 50 13 0 44 93 66 115 4.76e-24 100
MS.gene002434.t1 AT2G46590 74.000 50 13 0 44 93 78 127 5.29e-24 100
MS.gene002434.t1 AT3G52440 68.966 58 17 1 48 104 27 84 1.41e-23 96.7
MS.gene002434.t1 AT3G52440 68.966 58 17 1 48 104 46 103 1.97e-23 96.7
MS.gene002434.t1 AT4G00940 67.241 58 18 1 44 100 66 123 7.18e-23 95.5
MS.gene002434.t1 AT4G00940 67.241 58 18 1 44 100 66 123 7.18e-23 95.5
MS.gene002434.t1 AT4G00940 67.241 58 18 1 44 100 66 123 7.18e-23 95.5
MS.gene002434.t1 AT3G47500 76.923 52 11 1 48 98 112 163 7.34e-23 97.8
MS.gene002434.t1 AT5G39660 53.947 76 35 0 48 123 140 215 1.18e-22 97.1
MS.gene002434.t1 AT5G39660 53.947 76 35 0 48 123 140 215 1.18e-22 97.1
MS.gene002434.t1 AT5G39660 53.947 76 35 0 48 123 140 215 1.18e-22 97.1
MS.gene002434.t1 AT5G62430 67.742 62 15 2 48 108 56 113 1.40e-22 95.1
MS.gene002434.t1 AT4G21040 64.286 56 20 0 48 103 27 82 1.55e-22 93.6
MS.gene002434.t1 AT1G47655 70.000 50 15 0 44 93 27 76 1.65e-22 92.8
MS.gene002434.t1 AT1G69570 72.222 54 14 1 46 98 132 185 2.12e-22 95.9
MS.gene002434.t1 AT5G62940 78.261 46 10 0 48 93 75 120 3.61e-22 95.1
MS.gene002434.t1 AT1G26790 73.077 52 13 1 48 98 113 164 5.59e-22 94.4
MS.gene002434.t1 AT4G21080 51.471 68 33 0 48 115 27 94 6.39e-22 92.0
MS.gene002434.t1 AT2G34140 68.519 54 16 1 46 98 58 111 6.96e-22 90.1
MS.gene002434.t1 AT1G29160 68.519 54 16 1 46 98 62 115 8.02e-22 90.1
MS.gene002434.t1 AT4G21030 49.275 69 34 1 48 115 23 91 4.80e-14 69.3

Find 62 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTACCACCTGATTGATATT+TGG 0.188590 2.4:+71123734 None:intergenic
TTGGGAGGATATTGATTCTT+TGG 0.256542 2.4:-71123448 MS.gene002434:CDS
TTTCTCATGGGAGGAGTCTT+TGG 0.293343 2.4:+71124125 None:intergenic
GTTGTTGTAGTAACAAAATT+TGG 0.316594 2.4:+71124040 None:intergenic
GGTGGTAACAATGAAGAATT+TGG 0.329209 2.4:-71123720 MS.gene002434:CDS
GTCATTTGAGGTGGTGGTGG+AGG 0.372781 2.4:+71123848 None:intergenic
TGGTGAAGAGTTTAAAATAA+TGG 0.381474 2.4:-71123586 MS.gene002434:CDS
TCTTGCAAGCTCTGCAGAAA+TGG 0.390626 2.4:+71123997 None:intergenic
AACAATGAAGAATTTGGTAT+TGG 0.395188 2.4:-71123714 MS.gene002434:CDS
TTTGATCTTGCAACAAGGTT+TGG 0.402739 2.4:+71124159 None:intergenic
ATTCTGCCTGTTGTCATTTG+AGG 0.406425 2.4:+71123836 None:intergenic
TCCATGCCACTACTTGTTGC+AGG 0.407180 2.4:+71123489 None:intergenic
AGAATGGGAATATAAAGCTT+TGG 0.413450 2.4:+71123649 None:intergenic
AAAGAGCTTGAGTTTGAGAA+TGG 0.415643 2.4:+71123633 None:intergenic
TCATCCAATGGATATAACTA+TGG 0.419434 2.4:-71123606 MS.gene002434:CDS
CAACTGATCTAAATGTTCCT+TGG 0.420889 2.4:-71123422 MS.gene002434:CDS
TTTCTAGTAGAGGTGTTGAT+TGG 0.423681 2.4:-71124184 MS.gene002434:CDS
AACTGATCTAAATGTTCCTT+GGG 0.432000 2.4:-71123421 MS.gene002434:CDS
ATGTTCCTGTTGGTGGTGTT+AGG 0.438700 2.4:-71123944 MS.gene002434:CDS
CTCAGGAATGTTCCTGTTGG+TGG 0.438781 2.4:-71123951 MS.gene002434:CDS
GGACTAAAGGTGGTACTCTC+AGG 0.447007 2.4:-71123968 MS.gene002434:CDS
GAGGTGATGCTAATAGAAGT+TGG 0.447374 2.4:+71123891 None:intergenic
TTCTTCCTAACACCACCAAC+AGG 0.450348 2.4:+71123939 None:intergenic
TTCACCATAGTTATATCCAT+TGG 0.450485 2.4:+71123602 None:intergenic
GCATGGATATGTCAAACTAT+TGG 0.455144 2.4:-71123473 MS.gene002434:CDS
ATTTGAGGTGGTGGTGGAGG+AGG 0.457027 2.4:+71123851 None:intergenic
ATGAGTACCAAATATCAATC+AGG 0.469976 2.4:-71123741 MS.gene002434:CDS
GTATTTGTAGAGTCACATCT+TGG 0.471158 2.4:+71124062 None:intergenic
GCAGAGCTTGCAAGAGACAT+TGG 0.471598 2.4:-71123989 MS.gene002434:CDS
GTTGTCATTTGAGGTGGTGG+TGG 0.475259 2.4:+71123845 None:intergenic
CCTGTTGTCATTTGAGGTGG+TGG 0.483435 2.4:+71123842 None:intergenic
CCACCACCTCAAATGACAAC+AGG 0.496169 2.4:-71123842 MS.gene002434:CDS
TATGTCAAACTATTGGAGTT+GGG 0.508899 2.4:-71123466 MS.gene002434:CDS
TGCAAGAGACATTGGACTAA+AGG 0.515682 2.4:-71123981 MS.gene002434:CDS
TTGGTACTCATTAGATTCTG+TGG 0.525493 2.4:+71123753 None:intergenic
AAGAGCTTGAGTTTGAGAAT+GGG 0.526214 2.4:+71123634 None:intergenic
ATATGTCAAACTATTGGAGT+TGG 0.531877 2.4:-71123467 MS.gene002434:CDS
ATGCCAAGCACTAGTGGTAG+TGG 0.534649 2.4:-71123537 MS.gene002434:CDS
GTGGCACTATTACACATCCA+TGG 0.536686 2.4:-71123518 MS.gene002434:CDS
CTGCCTGTTGTCATTTGAGG+TGG 0.547681 2.4:+71123839 None:intergenic
TCTAAGCAAGTTTCTAGTAG+AGG 0.557594 2.4:-71124194 MS.gene002434:CDS
AGAGATTCATGCATAGAAGA+AGG 0.563751 2.4:+71123801 None:intergenic
ACCTGCAACAAGTAGTGGCA+TGG 0.573077 2.4:-71123490 MS.gene002434:CDS
TTCTGTGGTGGCAACAAAGA+TGG 0.580745 2.4:+71123768 None:intergenic
GTGCCACTACCACTAGTGCT+TGG 0.582189 2.4:+71123534 None:intergenic
CTTGTTGCAGGTATCTCCCA+TGG 0.587087 2.4:+71123501 None:intergenic
GAGATACCTGCAACAAGTAG+TGG 0.600865 2.4:-71123495 MS.gene002434:CDS
ACTCTCAGGAATGTTCCTGT+TGG 0.606251 2.4:-71123954 MS.gene002434:CDS
TGAAGAGTTTAAAATAATGG+AGG 0.607082 2.4:-71123583 MS.gene002434:CDS
GTACTCATTAGATTCTGTGG+TGG 0.610936 2.4:+71123756 None:intergenic
AGTGCAATGCCAAGCACTAG+TGG 0.615832 2.4:-71123543 MS.gene002434:CDS
TTCATGCATAGAAGAAGGTG+TGG 0.623493 2.4:+71123806 None:intergenic
TGGCACTATTACACATCCAT+GGG 0.627148 2.4:-71123517 MS.gene002434:CDS
CAAGCTCTGCAGAAATGGCG+AGG 0.631289 2.4:+71124002 None:intergenic
AGCTCTTTAAGATCATCCAA+TGG 0.640870 2.4:-71123618 MS.gene002434:CDS
CTTGTTGCAAGATCAAAACA+TGG 0.647907 2.4:-71124153 MS.gene002434:CDS
AGTACCAAATATCAATCAGG+TGG 0.650496 2.4:-71123738 MS.gene002434:CDS
AAGAGACATTGGACTAAAGG+TGG 0.661565 2.4:-71123978 MS.gene002434:CDS
GTCAAACTATTGGAGTTGGG+AGG 0.665707 2.4:-71123463 MS.gene002434:CDS
GCAACAAAATCAGCAACTAG+AGG 0.669254 2.4:-71124096 MS.gene002434:CDS
TTGATATCAGAATCATCCCA+AGG 0.669368 2.4:+71123405 None:intergenic
TGTGGTGGCAACAAAGATGG+TGG 0.671597 2.4:+71123771 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AACAATGAAGAATTTGGTAT+TGG - chr2.4:71123890-71123909 MS.gene002434:CDS 25.0%
! GTTGTTGTAGTAACAAAATT+TGG + chr2.4:71123567-71123586 None:intergenic 25.0%
!! TGAAGAGTTTAAAATAATGG+AGG - chr2.4:71124021-71124040 MS.gene002434:CDS 25.0%
!! TGGTGAAGAGTTTAAAATAA+TGG - chr2.4:71124018-71124037 MS.gene002434:CDS 25.0%
!!! AATATAAAGCTTTGGTTTTG+AGG + chr2.4:71123950-71123969 None:intergenic 25.0%
AACTGATCTAAATGTTCCTT+GGG - chr2.4:71124183-71124202 MS.gene002434:CDS 30.0%
AGAATGGGAATATAAAGCTT+TGG + chr2.4:71123958-71123977 None:intergenic 30.0%
ATATGTCAAACTATTGGAGT+TGG - chr2.4:71124137-71124156 MS.gene002434:CDS 30.0%
ATGAGTACCAAATATCAATC+AGG - chr2.4:71123863-71123882 MS.gene002434:CDS 30.0%
TATGTCAAACTATTGGAGTT+GGG - chr2.4:71124138-71124157 MS.gene002434:CDS 30.0%
TCATCCAATGGATATAACTA+TGG - chr2.4:71123998-71124017 MS.gene002434:CDS 30.0%
TTCACCATAGTTATATCCAT+TGG + chr2.4:71124005-71124024 None:intergenic 30.0%
AAAGAGCTTGAGTTTGAGAA+TGG + chr2.4:71123974-71123993 None:intergenic 35.0%
AAGAGCTTGAGTTTGAGAAT+GGG + chr2.4:71123973-71123992 None:intergenic 35.0%
AGAGATTCATGCATAGAAGA+AGG + chr2.4:71123806-71123825 None:intergenic 35.0%
AGTACCAAATATCAATCAGG+TGG - chr2.4:71123866-71123885 MS.gene002434:CDS 35.0%
CAACTGATCTAAATGTTCCT+TGG - chr2.4:71124182-71124201 MS.gene002434:CDS 35.0%
CTTGTTGCAAGATCAAAACA+TGG - chr2.4:71123451-71123470 MS.gene002434:CDS 35.0%
GCATGGATATGTCAAACTAT+TGG - chr2.4:71124131-71124150 MS.gene002434:CDS 35.0%
GGTGGTAACAATGAAGAATT+TGG - chr2.4:71123884-71123903 MS.gene002434:CDS 35.0%
GTATTTGTAGAGTCACATCT+TGG + chr2.4:71123545-71123564 None:intergenic 35.0%
GTTACCACCTGATTGATATT+TGG + chr2.4:71123873-71123892 None:intergenic 35.0%
TTGATATCAGAATCATCCCA+AGG + chr2.4:71124202-71124221 None:intergenic 35.0%
TTGGTACTCATTAGATTCTG+TGG + chr2.4:71123854-71123873 None:intergenic 35.0%
TTTGATCTTGCAACAAGGTT+TGG + chr2.4:71123448-71123467 None:intergenic 35.0%
! GGTGCTAATAGTAGTTTTTG+AGG + chr2.4:71123735-71123754 None:intergenic 35.0%
!! AGCTCTTTAAGATCATCCAA+TGG - chr2.4:71123986-71124005 MS.gene002434:CDS 35.0%
!! TCTAAGCAAGTTTCTAGTAG+AGG - chr2.4:71123410-71123429 MS.gene002434:CDS 35.0%
!! TTGGGAGGATATTGATTCTT+TGG - chr2.4:71124156-71124175 MS.gene002434:CDS 35.0%
!! TTTCTAGTAGAGGTGTTGAT+TGG - chr2.4:71123420-71123439 MS.gene002434:CDS 35.0%
!!! AAGCTTTGGTTTTGAGGAAA+AGG + chr2.4:71123944-71123963 None:intergenic 35.0%
!!! CATGTTTTGATCTTGCAACA+AGG + chr2.4:71123453-71123472 None:intergenic 35.0%
!!! TGTTGCTGTTGTTTTCTCAT+GGG + chr2.4:71123494-71123513 None:intergenic 35.0%
!!! TTGTTGCTGTTGTTTTCTCA+TGG + chr2.4:71123495-71123514 None:intergenic 35.0%
AAGAGACATTGGACTAAAGG+TGG - chr2.4:71123626-71123645 MS.gene002434:CDS 40.0%
GAGGTGATGCTAATAGAAGT+TGG + chr2.4:71123716-71123735 None:intergenic 40.0%
GCAACAAAATCAGCAACTAG+AGG - chr2.4:71123508-71123527 MS.gene002434:CDS 40.0%
GTACTCATTAGATTCTGTGG+TGG + chr2.4:71123851-71123870 None:intergenic 40.0%
TGCAAGAGACATTGGACTAA+AGG - chr2.4:71123623-71123642 MS.gene002434:CDS 40.0%
TGGCACTATTACACATCCAT+GGG - chr2.4:71124087-71124106 MS.gene002434:CDS 40.0%
TTCATGCATAGAAGAAGGTG+TGG + chr2.4:71123801-71123820 None:intergenic 40.0%
! ATTCTGCCTGTTGTCATTTG+AGG + chr2.4:71123771-71123790 None:intergenic 40.0%
ACTCTCAGGAATGTTCCTGT+TGG - chr2.4:71123650-71123669 MS.gene002434:CDS 45.0%
GAGATACCTGCAACAAGTAG+TGG - chr2.4:71124109-71124128 MS.gene002434:CDS 45.0%
GTCAAACTATTGGAGTTGGG+AGG - chr2.4:71124141-71124160 MS.gene002434:CDS 45.0%
GTGGCACTATTACACATCCA+TGG - chr2.4:71124086-71124105 MS.gene002434:CDS 45.0%
TCTTGCAAGCTCTGCAGAAA+TGG + chr2.4:71123610-71123629 None:intergenic 45.0%
TTCTGTGGTGGCAACAAAGA+TGG + chr2.4:71123839-71123858 None:intergenic 45.0%
TTCTTCCTAACACCACCAAC+AGG + chr2.4:71123668-71123687 None:intergenic 45.0%
TTTCTCATGGGAGGAGTCTT+TGG + chr2.4:71123482-71123501 None:intergenic 45.0%
!! ATGTTCCTGTTGGTGGTGTT+AGG - chr2.4:71123660-71123679 MS.gene002434:CDS 45.0%
!!! TGCTGTTGTTTTCTCATGGG+AGG + chr2.4:71123491-71123510 None:intergenic 45.0%
ACCTGCAACAAGTAGTGGCA+TGG - chr2.4:71124114-71124133 MS.gene002434:CDS 50.0%
AGTGCAATGCCAAGCACTAG+TGG - chr2.4:71124061-71124080 MS.gene002434:CDS 50.0%
ATGCCAAGCACTAGTGGTAG+TGG - chr2.4:71124067-71124086 MS.gene002434:CDS 50.0%
CCACCACCTCAAATGACAAC+AGG - chr2.4:71123762-71123781 MS.gene002434:CDS 50.0%
CTCAGGAATGTTCCTGTTGG+TGG - chr2.4:71123653-71123672 MS.gene002434:CDS 50.0%
CTTGTTGCAGGTATCTCCCA+TGG + chr2.4:71124106-71124125 None:intergenic 50.0%
GCAGAGCTTGCAAGAGACAT+TGG - chr2.4:71123615-71123634 MS.gene002434:CDS 50.0%
GGACTAAAGGTGGTACTCTC+AGG - chr2.4:71123636-71123655 MS.gene002434:CDS 50.0%
TGTGGTGGCAACAAAGATGG+TGG + chr2.4:71123836-71123855 None:intergenic 50.0%
! CCTGTTGTCATTTGAGGTGG+TGG + chr2.4:71123765-71123784 None:intergenic 50.0%
! CTGCCTGTTGTCATTTGAGG+TGG + chr2.4:71123768-71123787 None:intergenic 50.0%
! GTTGTCATTTGAGGTGGTGG+TGG + chr2.4:71123762-71123781 None:intergenic 50.0%
! TCCATGCCACTACTTGTTGC+AGG + chr2.4:71124118-71124137 None:intergenic 50.0%
CAAGCTCTGCAGAAATGGCG+AGG + chr2.4:71123605-71123624 None:intergenic 55.0%
! GTGCCACTACCACTAGTGCT+TGG + chr2.4:71124073-71124092 None:intergenic 55.0%
!! ATTTGAGGTGGTGGTGGAGG+AGG + chr2.4:71123756-71123775 None:intergenic 55.0%
!! GTCATTTGAGGTGGTGGTGG+AGG + chr2.4:71123759-71123778 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 71123398 71124228 71123398 ID=MS.gene002434
chr2.4 mRNA 71123398 71124228 71123398 ID=MS.gene002434.t1;Parent=MS.gene002434
chr2.4 exon 71123398 71124228 71123398 ID=MS.gene002434.t1.exon1;Parent=MS.gene002434.t1
chr2.4 CDS 71123398 71124228 71123398 ID=cds.MS.gene002434.t1;Parent=MS.gene002434.t1
Gene Sequence

>MS.gene002434

ATGGGCTTGAGTTCTAAGCAAGTTTCTAGTAGAGGTGTTGATTGGAACCAAACCTTGTTGCAAGATCAAAACATGGAACTTCCAAAGACTCCTCCCATGAGAAAACAACAGCAACAAAATCAGCAACTAGAGGCAGTGAATTGTCCAAGATGTGACTCTACAAATACCAAATTTTGTTACTACAACAACTATAACAAGTCTCAACCTCGCCATTTCTGCAGAGCTTGCAAGAGACATTGGACTAAAGGTGGTACTCTCAGGAATGTTCCTGTTGGTGGTGTTAGGAAGAATAAGAGAGTCAAGATATCAACTTCTCCAACTTCTATTAGCATCACCTCAAAAACTACTATTAGCACCTCCTCCACCACCACCTCAAATGACAACAGGCAGAATAAAAAAACCACACCTTCTTCTATGCATGAATCTCTTATTCATCCACCATCTTTGTTGCCACCACAGAATCTAATGAGTACCAAATATCAATCAGGTGGTAACAATGAAGAATTTGGTATTGGTAATGACATGTTTCTGAGTTCATCTATGCCTTTTCCTCAAAACCAAAGCTTTATATTCCCATTCTCAAACTCAAGCTCTTTAAGATCATCCAATGGATATAACTATGGTGAAGAGTTTAAAATAATGGAGGAGTCAACTATTAACAACAGTGCAATGCCAAGCACTAGTGGTAGTGGCACTATTACACATCCATGGGAGATACCTGCAACAAGTAGTGGCATGGATATGTCAAACTATTGGAGTTGGGAGGATATTGATTCTTTGGTCTCAACTGATCTAAATGTTCCTTGGGATGATTCTGATATCAAACCTTGA
Protein sequence

>MS.gene002434.t1

MGLSSKQVSSRGVDWNQTLLQDQNMELPKTPPMRKQQQQNQQLEAVNCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGVRKNKRVKISTSPTSISITSKTTISTSSTTTSNDNRQNKKTTPSSMHESLIHPPSLLPPQNLMSTKYQSGGNNEEFGIGNDMFLSSSMPFPQNQSFIFPFSNSSSLRSSNGYNYGEEFKIMEESTINNSAMPSTSGSGTITHPWEIPATSSGMDMSNYWSWEDIDSLVSTDLNVPWDDSDIKP