Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002567.t1 | XP_003593769.1 | 96.3 | 216 | 8 | 0 | 1 | 216 | 1 | 216 | 1.20E-108 | 402.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002567.t1 | Q9S7Y1 | 47.1 | 136 | 64 | 4 | 56 | 184 | 164 | 298 | 2.4e-20 | 100.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002567.t1 | G7ILJ0 | 96.3 | 216 | 8 | 0 | 1 | 216 | 1 | 216 | 8.8e-109 | 402.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene002567.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002567.t1 | MTR_2g015890 | 96.296 | 216 | 8 | 0 | 1 | 216 | 1 | 216 | 1.36e-154 | 427 |
MS.gene002567.t1 | MTR_2g015890 | 81.250 | 256 | 8 | 1 | 1 | 216 | 1 | 256 | 1.30e-145 | 406 |
MS.gene002567.t1 | MTR_2g015890 | 93.220 | 118 | 8 | 0 | 99 | 216 | 1 | 118 | 2.84e-77 | 228 |
MS.gene002567.t1 | MTR_2g015890 | 69.620 | 158 | 8 | 1 | 99 | 216 | 1 | 158 | 1.21e-68 | 207 |
MS.gene002567.t1 | MTR_4g087920 | 56.354 | 181 | 72 | 3 | 11 | 184 | 19 | 199 | 4.96e-47 | 156 |
MS.gene002567.t1 | MTR_4g079760 | 49.367 | 158 | 76 | 2 | 19 | 173 | 21 | 177 | 6.83e-38 | 132 |
MS.gene002567.t1 | MTR_2g091190 | 50.000 | 150 | 70 | 2 | 29 | 175 | 23 | 170 | 1.64e-35 | 125 |
MS.gene002567.t1 | MTR_3g070970 | 43.284 | 134 | 60 | 3 | 67 | 184 | 73 | 206 | 3.01e-23 | 94.4 |
MS.gene002567.t1 | MTR_1g093750 | 49.153 | 118 | 53 | 1 | 63 | 173 | 154 | 271 | 6.08e-22 | 92.0 |
MS.gene002567.t1 | MTR_5g032375 | 36.508 | 126 | 66 | 3 | 56 | 168 | 34 | 158 | 7.41e-14 | 68.2 |
MS.gene002567.t1 | MTR_5g066080 | 39.535 | 129 | 51 | 2 | 67 | 168 | 37 | 165 | 3.04e-12 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002567.t1 | AT3G56770 | 47.458 | 118 | 56 | 3 | 62 | 174 | 40 | 156 | 2.37e-26 | 101 |
MS.gene002567.t1 | AT2G40200 | 45.600 | 125 | 59 | 2 | 69 | 184 | 65 | 189 | 4.25e-26 | 101 |
MS.gene002567.t1 | AT1G68810 | 47.059 | 136 | 64 | 4 | 56 | 184 | 164 | 298 | 2.18e-22 | 94.0 |
MS.gene002567.t1 | AT2G41130 | 36.686 | 169 | 96 | 3 | 17 | 174 | 11 | 179 | 3.35e-20 | 85.9 |
MS.gene002567.t1 | AT3G25710 | 41.791 | 134 | 72 | 3 | 56 | 184 | 122 | 254 | 3.04e-19 | 84.7 |
MS.gene002567.t1 | AT4G38070 | 32.710 | 107 | 68 | 2 | 66 | 172 | 91 | 193 | 4.73e-12 | 63.9 |
Find 37 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTACTAGCTGAGGTTATT+AGG | 0.226217 | 2.1:+69680206 | MS.gene002567:CDS |
ATCAACAAACTCATTGGTTT+TGG | 0.255474 | 2.1:+69678576 | MS.gene002567:CDS |
CTTAGATCAGTTAGAAGTTC+TGG | 0.280659 | 2.1:-69680370 | None:intergenic |
AAGTCCCCTCCAATAATTAA+TGG | 0.304566 | 2.1:+69678622 | MS.gene002567:CDS |
AATGCCACTTCATATAGATT+TGG | 0.335342 | 2.1:+69678520 | MS.gene002567:CDS |
TAGTGGCTCTGAAGAATCAT+AGG | 0.340919 | 2.1:+69678677 | MS.gene002567:CDS |
TGATGCTAACAAAACTTTAG+TGG | 0.343142 | 2.1:+69678660 | MS.gene002567:CDS |
AAGAGAAGAAACAGAATTAA+TGG | 0.350077 | 2.1:+69678712 | MS.gene002567:CDS |
TGATAAACTTCAACTACAAT+TGG | 0.375139 | 2.1:+69680402 | MS.gene002567:CDS |
AAAGTTGAACCATGTGAAAA+TGG | 0.387199 | 2.1:+69680304 | MS.gene002567:CDS |
TTCACTTCATCATCATCTGT+TGG | 0.414183 | 2.1:-69680283 | None:intergenic |
GTTTGTATCAACAAACTCAT+TGG | 0.426459 | 2.1:+69678570 | MS.gene002567:CDS |
TTCTCTCCATTAATTATTGG+AGG | 0.433494 | 2.1:-69678628 | None:intergenic |
CCAGGAACTGAGTTCTGTAC+TGG | 0.489161 | 2.1:+69680540 | MS.gene002567:intron |
ACTGAGTTCTGTACTGGAAA+GGG | 0.489265 | 2.1:+69680546 | MS.gene002567:CDS |
CTCTCCATTAATTATTGGAG+GGG | 0.498785 | 2.1:-69678626 | None:intergenic |
TATTATACCTTTGGAGAGGA+GGG | 0.509382 | 2.1:-69678763 | None:intergenic |
ATTCTAGCTCTGATATTTCG+AGG | 0.523502 | 2.1:+69678488 | MS.gene002567:CDS |
CAAATGAGACTTCAAGAGGT+GGG | 0.540083 | 2.1:+69678548 | MS.gene002567:CDS |
TCTCTCCATTAATTATTGGA+GGG | 0.544195 | 2.1:-69678627 | None:intergenic |
TTATTATACCTTTGGAGAGG+AGG | 0.544800 | 2.1:-69678764 | None:intergenic |
AACTGAGTTCTGTACTGGAA+AGG | 0.553572 | 2.1:+69680545 | MS.gene002567:CDS |
CAAAGCAACTTTACTAGCTG+AGG | 0.560860 | 2.1:+69680198 | MS.gene002567:CDS |
AGTGGCTCTGAAGAATCATA+GGG | 0.564496 | 2.1:+69678678 | MS.gene002567:CDS |
AATGCAGATGAAGCAAGTAA+AGG | 0.565648 | 2.1:+69680250 | MS.gene002567:CDS |
ACTTGTTCCCTCCTCTCCAA+AGG | 0.568287 | 2.1:+69678756 | MS.gene002567:CDS |
GGAAAGGGTTTCTACCTCGA+TGG | 0.569167 | 2.1:+69680561 | MS.gene002567:CDS |
AGCACCAAATCTATATGAAG+TGG | 0.573695 | 2.1:-69678524 | None:intergenic |
TCAAATGAGACTTCAAGAGG+TGG | 0.607431 | 2.1:+69678547 | MS.gene002567:CDS |
AGATTATTATACCTTTGGAG+AGG | 0.615783 | 2.1:-69678767 | None:intergenic |
ATCAACAAGAGCAAAACTCA+TGG | 0.629280 | 2.1:-69680648 | None:intergenic |
GTTGAACCATGTGAAAATGG+TGG | 0.637388 | 2.1:+69680307 | MS.gene002567:CDS |
TGCATCTGTTTGCAAAGACG+TGG | 0.639661 | 2.1:-69680601 | None:intergenic |
GAGAGGAGGGAACAAGTGCA+CGG | 0.657365 | 2.1:-69678750 | None:intergenic |
GCTTCAAATGAGACTTCAAG+AGG | 0.660687 | 2.1:+69678544 | MS.gene002567:CDS |
AGAATCATAGGGAAGCAGAG+AGG | 0.725124 | 2.1:+69678689 | MS.gene002567:CDS |
TCTTAACGAGTAATCCATCG+AGG | 0.765808 | 2.1:-69680575 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATAAATAAATAAGGT+AGG | + | chr2.1:69679949-69679968 | MS.gene002567:intron | 10.0% |
!! | CCTTAAAAAATAAATAAATA+AGG | + | chr2.1:69679945-69679964 | MS.gene002567:intron | 10.0% |
!!! | ATTTTTTAAGGATTATTAAA+TGG | - | chr2.1:69679936-69679955 | None:intergenic | 10.0% |
!!! | CCTTATTTATTTATTTTTTA+AGG | - | chr2.1:69679948-69679967 | None:intergenic | 10.0% |
!! | TATAAAAAATACGAAAAGAA+AGG | - | chr2.1:69678794-69678813 | None:intergenic | 15.0% |
!!! | ATTGTTATCTGATTTTAAAA+AGG | + | chr2.1:69678980-69678999 | MS.gene002567:intron | 15.0% |
!!! | TAGTATTAATTTATTTGTTG+TGG | + | chr2.1:69679854-69679873 | MS.gene002567:intron | 15.0% |
!! | AAACTGTAAAAAAGTTCAAT+TGG | - | chr2.1:69678934-69678953 | None:intergenic | 20.0% |
!! | ACTATAATGTAACATCATAT+TGG | + | chr2.1:69679599-69679618 | MS.gene002567:intron | 20.0% |
!! | CTGAAAAAATACATTTACTT+AGG | + | chr2.1:69679176-69679195 | MS.gene002567:intron | 20.0% |
!! | TATCTCTTTAAATATCTTTG+TGG | + | chr2.1:69678867-69678886 | MS.gene002567:intron | 20.0% |
!! | TATGTACATACTGTTATTAA+TGG | + | chr2.1:69680149-69680168 | MS.gene002567:intron | 20.0% |
!! | TTTAAGGATTATTAAATGGT+TGG | - | chr2.1:69679932-69679951 | None:intergenic | 20.0% |
!!! | ATTAATTTATTTGTTGTGGT+GGG | + | chr2.1:69679858-69679877 | MS.gene002567:intron | 20.0% |
!!! | TATTAATTTATTTGTTGTGG+TGG | + | chr2.1:69679857-69679876 | MS.gene002567:intron | 20.0% |
!!! | TTTTTCTCTCCATTAATTAT+TGG | - | chr2.1:69678634-69678653 | None:intergenic | 20.0% |
! | AAATGAAACAACCTTAGTTT+GGG | - | chr2.1:69679662-69679681 | None:intergenic | 25.0% |
! | AACAAATGATTCTTAGTTGT+GGG | + | chr2.1:69679708-69679727 | MS.gene002567:intron | 25.0% |
! | AAGAGAAGAAACAGAATTAA+TGG | + | chr2.1:69678712-69678731 | MS.gene002567:CDS | 25.0% |
! | AAGGAAGATTATTATACCTT+TGG | - | chr2.1:69678775-69678794 | None:intergenic | 25.0% |
! | ATTCCTAATTGCAACTTAAT+TGG | - | chr2.1:69679372-69679391 | None:intergenic | 25.0% |
! | ATTGAACAATGTCAACTTAT+TGG | + | chr2.1:69680505-69680524 | MS.gene002567:intron | 25.0% |
! | TAAATGAAACAACCTTAGTT+TGG | - | chr2.1:69679663-69679682 | None:intergenic | 25.0% |
! | TAACAAATGATTCTTAGTTG+TGG | + | chr2.1:69679707-69679726 | MS.gene002567:intron | 25.0% |
! | TGATAAACTTCAACTACAAT+TGG | + | chr2.1:69680402-69680421 | MS.gene002567:CDS | 25.0% |
!! | TTATAAACATGTTTTACCGA+TGG | + | chr2.1:69678904-69678923 | MS.gene002567:intron | 25.0% |
AAAGTTGAACCATGTGAAAA+TGG | + | chr2.1:69680304-69680323 | MS.gene002567:CDS | 30.0% | |
AACTTCAACTACAATTGGTA+AGG | + | chr2.1:69680407-69680426 | MS.gene002567:intron | 30.0% | |
AAGGGAAGAAATATCAACTT+TGG | + | chr2.1:69680426-69680445 | MS.gene002567:intron | 30.0% | |
AAGTTCAATTGGTAAACCAT+CGG | - | chr2.1:69678923-69678942 | None:intergenic | 30.0% | |
ACACAATGATCGAATATGAT+TGG | - | chr2.1:69678822-69678841 | None:intergenic | 30.0% | |
ACTTCAACTACAATTGGTAA+GGG | + | chr2.1:69680408-69680427 | MS.gene002567:intron | 30.0% | |
AGGGAAGAAATATCAACTTT+GGG | + | chr2.1:69680427-69680446 | MS.gene002567:intron | 30.0% | |
ATTGAAATTCATGCAGCATT+TGG | - | chr2.1:69679289-69679308 | None:intergenic | 30.0% | |
ATTGATGGAAATACAAGCTA+TGG | + | chr2.1:69679233-69679252 | MS.gene002567:intron | 30.0% | |
GTTTGTATCAACAAACTCAT+TGG | + | chr2.1:69678570-69678589 | MS.gene002567:CDS | 30.0% | |
TAACTTTATCTGACCAATGA+AGG | + | chr2.1:69679896-69679915 | MS.gene002567:intron | 30.0% | |
TATGCGTTAGGGTTTAATAT+CGG | + | chr2.1:69680023-69680042 | MS.gene002567:intron | 30.0% | |
TATTGGAAATAATGTTCACC+AGG | + | chr2.1:69680522-69680541 | MS.gene002567:intron | 30.0% | |
TCTCTCCATTAATTATTGGA+GGG | - | chr2.1:69678630-69678649 | None:intergenic | 30.0% | |
TGATGCTAACAAAACTTTAG+TGG | + | chr2.1:69678660-69678679 | MS.gene002567:CDS | 30.0% | |
TTCTCTCCATTAATTATTGG+AGG | - | chr2.1:69678631-69678650 | None:intergenic | 30.0% | |
TTGAAATTCATGCAGCATTT+GGG | - | chr2.1:69679288-69679307 | None:intergenic | 30.0% | |
TTGATGGAAATACAAGCTAT+GGG | + | chr2.1:69679234-69679253 | MS.gene002567:intron | 30.0% | |
! | AATGCCACTTCATATAGATT+TGG | + | chr2.1:69678520-69678539 | MS.gene002567:CDS | 30.0% |
! | ACACCAATTAAGTTGCAATT+AGG | + | chr2.1:69679366-69679385 | MS.gene002567:intron | 30.0% |
! | AGATTATTATACCTTTGGAG+AGG | - | chr2.1:69678770-69678789 | None:intergenic | 30.0% |
! | CCTTATATAGTTGACTTTAG+CGG | - | chr2.1:69679569-69679588 | None:intergenic | 30.0% |
! | TTGACTGGTCAAATGTATAT+GGG | + | chr2.1:69679541-69679560 | MS.gene002567:intron | 30.0% |
!! | CAGAAAGAATGATTTGTTGA+GGG | - | chr2.1:69679767-69679786 | None:intergenic | 30.0% |
!! | GTCATTTACGATGTTGATTT+CGG | + | chr2.1:69680103-69680122 | MS.gene002567:intron | 30.0% |
!! | TCAGAAAGAATGATTTGTTG+AGG | - | chr2.1:69679768-69679787 | None:intergenic | 30.0% |
!! | TCTGATTTTAAAAAGGCTAG+CGG | + | chr2.1:69678987-69679006 | MS.gene002567:intron | 30.0% |
!!! | ATCAACAAACTCATTGGTTT+TGG | + | chr2.1:69678576-69678595 | MS.gene002567:CDS | 30.0% |
AAGTCCCCTCCAATAATTAA+TGG | + | chr2.1:69678622-69678641 | MS.gene002567:CDS | 35.0% | |
AATGCAGATGAAGCAAGTAA+AGG | + | chr2.1:69680250-69680269 | MS.gene002567:CDS | 35.0% | |
ACAGAGACATTTGATATGCT+CGG | - | chr2.1:69679066-69679085 | None:intergenic | 35.0% | |
AGCACCAAATCTATATGAAG+TGG | - | chr2.1:69678527-69678546 | None:intergenic | 35.0% | |
AGCTGAAGTTTGAAGATTGA+TGG | + | chr2.1:69679218-69679237 | MS.gene002567:intron | 35.0% | |
ATCTGACCAATGAAGGAATT+AGG | + | chr2.1:69679903-69679922 | MS.gene002567:intron | 35.0% | |
CATATACATTTGACCAGTCA+AGG | - | chr2.1:69679542-69679561 | None:intergenic | 35.0% | |
CCGCTAAAGTCAACTATATA+AGG | + | chr2.1:69679566-69679585 | MS.gene002567:intron | 35.0% | |
CTCTCCATTAATTATTGGAG+GGG | - | chr2.1:69678629-69678648 | None:intergenic | 35.0% | |
CTGGTTTCAAATATGCGTTA+GGG | + | chr2.1:69680012-69680031 | MS.gene002567:intron | 35.0% | |
CTGTTATTAATGGTAGCTGA+TGG | + | chr2.1:69680159-69680178 | MS.gene002567:intron | 35.0% | |
CTTAGATCAGTTAGAAGTTC+TGG | - | chr2.1:69680373-69680392 | None:intergenic | 35.0% | |
CTTTAACTCTCAGAATGTGT+TGG | - | chr2.1:69679493-69679512 | None:intergenic | 35.0% | |
CTTTACTAGCTGAGGTTATT+AGG | + | chr2.1:69680206-69680225 | MS.gene002567:CDS | 35.0% | |
GCTGATGGTATTCTTATAGA+TGG | + | chr2.1:69680174-69680193 | MS.gene002567:intron | 35.0% | |
TATTAATAGCTGTCAACAGC+TGG | + | chr2.1:69679796-69679815 | MS.gene002567:intron | 35.0% | |
TGATGGAAATACAAGCTATG+GGG | + | chr2.1:69679235-69679254 | MS.gene002567:intron | 35.0% | |
TTAAATTAAGGGTCCTTGAC+TGG | + | chr2.1:69679526-69679545 | MS.gene002567:intron | 35.0% | |
TTCACTTCATCATCATCTGT+TGG | - | chr2.1:69680286-69680305 | None:intergenic | 35.0% | |
! | AAATATCAACTTTGGGAGAC+AGG | + | chr2.1:69680434-69680453 | MS.gene002567:intron | 35.0% |
! | AATATCAACTTTGGGAGACA+GGG | + | chr2.1:69680435-69680454 | MS.gene002567:intron | 35.0% |
! | AATGATCCACCATTTTCACA+TGG | - | chr2.1:69680316-69680335 | None:intergenic | 35.0% |
! | CTTGACTGGTCAAATGTATA+TGG | + | chr2.1:69679540-69679559 | MS.gene002567:intron | 35.0% |
! | TATTATACCTTTGGAGAGGA+GGG | - | chr2.1:69678766-69678785 | None:intergenic | 35.0% |
! | TCTGGTTTCAAATATGCGTT+AGG | + | chr2.1:69680011-69680030 | MS.gene002567:intron | 35.0% |
! | TTATTATACCTTTGGAGAGG+AGG | - | chr2.1:69678767-69678786 | None:intergenic | 35.0% |
!! | ATTCTAGCTCTGATATTTCG+AGG | + | chr2.1:69678488-69678507 | MS.gene002567:CDS | 35.0% |
!!! | TTGGTTTTGGATAGTGAGAA+AGG | + | chr2.1:69678589-69678608 | MS.gene002567:CDS | 35.0% |
AACTGAGTTCTGTACTGGAA+AGG | + | chr2.1:69680545-69680564 | MS.gene002567:CDS | 40.0% | |
ACATCACCAGCTGAATATTC+TGG | + | chr2.1:69679741-69679760 | MS.gene002567:intron | 40.0% | |
ACTGAGTTCTGTACTGGAAA+GGG | + | chr2.1:69680546-69680565 | MS.gene002567:CDS | 40.0% | |
CAAAGCAACTTTACTAGCTG+AGG | + | chr2.1:69680198-69680217 | MS.gene002567:CDS | 40.0% | |
CAAATGAGACTTCAAGAGGT+GGG | + | chr2.1:69678548-69678567 | MS.gene002567:CDS | 40.0% | |
CAGAGACATTTGATATGCTC+GGG | - | chr2.1:69679065-69679084 | None:intergenic | 40.0% | |
GCTTCAAATGAGACTTCAAG+AGG | + | chr2.1:69678544-69678563 | MS.gene002567:CDS | 40.0% | |
GTTGAACCATGTGAAAATGG+TGG | + | chr2.1:69680307-69680326 | MS.gene002567:CDS | 40.0% | |
TCAAATGAGACTTCAAGAGG+TGG | + | chr2.1:69678547-69678566 | MS.gene002567:CDS | 40.0% | |
TCATTCAAAGCGTAGGTCAT+AGG | - | chr2.1:69679983-69680002 | None:intergenic | 40.0% | |
TCTTAACGAGTAATCCATCG+AGG | - | chr2.1:69680578-69680597 | None:intergenic | 40.0% | |
TCTTCGATAGTCCCAAACTA+AGG | + | chr2.1:69679648-69679667 | MS.gene002567:intron | 40.0% | |
TGGTTGCCTAATTCCTTCAT+TGG | - | chr2.1:69679912-69679931 | None:intergenic | 40.0% | |
! | AGAATATTCAGCTGGTGATG+TGG | - | chr2.1:69679742-69679761 | None:intergenic | 40.0% |
! | CTTTGAATGAAAGGCGTATC+TGG | + | chr2.1:69679993-69680012 | MS.gene002567:intron | 40.0% |
! | TGACCTACGCTTTGAATGAA+AGG | + | chr2.1:69679984-69680003 | MS.gene002567:intron | 40.0% |
!! | ACAATAAGTGCTGAGAAGCA+AGG | + | chr2.1:69679018-69679037 | MS.gene002567:intron | 40.0% |
!! | AGTGGCTCTGAAGAATCATA+GGG | + | chr2.1:69678678-69678697 | MS.gene002567:CDS | 40.0% |
!! | TAGTGGCTCTGAAGAATCAT+AGG | + | chr2.1:69678677-69678696 | MS.gene002567:CDS | 40.0% |
ACGCCTTTCATTCAAAGCGT+AGG | - | chr2.1:69679990-69680009 | None:intergenic | 45.0% | |
AGAATCATAGGGAAGCAGAG+AGG | + | chr2.1:69678689-69678708 | MS.gene002567:CDS | 45.0% | |
TGCATCTGTTTGCAAAGACG+TGG | - | chr2.1:69680604-69680623 | None:intergenic | 45.0% | |
! | CTCTCAGAATGTGTTGGTGA+TGG | - | chr2.1:69679487-69679506 | None:intergenic | 45.0% |
!! | AAACATTATAATTAAATTAA+GGG | + | chr2.1:69679515-69679534 | MS.gene002567:intron | 5.0% |
!! | TAAACATTATAATTAAATTA+AGG | + | chr2.1:69679514-69679533 | MS.gene002567:intron | 5.0% |
ACTTGTTCCCTCCTCTCCAA+AGG | + | chr2.1:69678756-69678775 | MS.gene002567:CDS | 50.0% | |
CCAGGAACTGAGTTCTGTAC+TGG | + | chr2.1:69680540-69680559 | MS.gene002567:intron | 50.0% | |
CCAGTACAGAACTCAGTTCC+TGG | - | chr2.1:69680543-69680562 | None:intergenic | 50.0% | |
GGAAAGGGTTTCTACCTCGA+TGG | + | chr2.1:69680561-69680580 | MS.gene002567:CDS | 50.0% | |
TACAAGCTATGGGGCAGAAC+TGG | + | chr2.1:69679244-69679263 | MS.gene002567:intron | 50.0% | |
TGAGGGCCAGAATATTCAGC+TGG | - | chr2.1:69679750-69679769 | None:intergenic | 50.0% | |
GAGAGGAGGGAACAAGTGCA+CGG | - | chr2.1:69678753-69678772 | None:intergenic | 55.0% | |
! | CAGCTGGTGATGTGGAGTGT+GGG | - | chr2.1:69679734-69679753 | None:intergenic | 55.0% |
! | TCAGCTGGTGATGTGGAGTG+TGG | - | chr2.1:69679735-69679754 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 69678484 | 69680669 | 69678484 | ID=MS.gene002567 |
chr2.1 | mRNA | 69678484 | 69680669 | 69678484 | ID=MS.gene002567.t1;Parent=MS.gene002567 |
chr2.1 | exon | 69678484 | 69678777 | 69678484 | ID=MS.gene002567.t1.exon1;Parent=MS.gene002567.t1 |
chr2.1 | CDS | 69678484 | 69678777 | 69678484 | ID=cds.MS.gene002567.t1;Parent=MS.gene002567.t1 |
chr2.1 | exon | 69680193 | 69680423 | 69680193 | ID=MS.gene002567.t1.exon2;Parent=MS.gene002567.t1 |
chr2.1 | CDS | 69680193 | 69680423 | 69680193 | ID=cds.MS.gene002567.t1;Parent=MS.gene002567.t1 |
chr2.1 | exon | 69680544 | 69680669 | 69680544 | ID=MS.gene002567.t1.exon3;Parent=MS.gene002567.t1 |
chr2.1 | CDS | 69680544 | 69680669 | 69680544 | ID=cds.MS.gene002567.t1;Parent=MS.gene002567.t1 |
Gene Sequence |
Protein sequence |