Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002567.t1 | XP_003593769.1 | 96.3 | 216 | 8 | 0 | 1 | 216 | 1 | 216 | 1.20E-108 | 402.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002567.t1 | Q9S7Y1 | 47.1 | 136 | 64 | 4 | 56 | 184 | 164 | 298 | 2.4e-20 | 100.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002567.t1 | G7ILJ0 | 96.3 | 216 | 8 | 0 | 1 | 216 | 1 | 216 | 8.8e-109 | 402.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene002567.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002567.t1 | MTR_2g015890 | 96.296 | 216 | 8 | 0 | 1 | 216 | 1 | 216 | 1.36e-154 | 427 |
| MS.gene002567.t1 | MTR_2g015890 | 81.250 | 256 | 8 | 1 | 1 | 216 | 1 | 256 | 1.30e-145 | 406 |
| MS.gene002567.t1 | MTR_2g015890 | 93.220 | 118 | 8 | 0 | 99 | 216 | 1 | 118 | 2.84e-77 | 228 |
| MS.gene002567.t1 | MTR_2g015890 | 69.620 | 158 | 8 | 1 | 99 | 216 | 1 | 158 | 1.21e-68 | 207 |
| MS.gene002567.t1 | MTR_4g087920 | 56.354 | 181 | 72 | 3 | 11 | 184 | 19 | 199 | 4.96e-47 | 156 |
| MS.gene002567.t1 | MTR_4g079760 | 49.367 | 158 | 76 | 2 | 19 | 173 | 21 | 177 | 6.83e-38 | 132 |
| MS.gene002567.t1 | MTR_2g091190 | 50.000 | 150 | 70 | 2 | 29 | 175 | 23 | 170 | 1.64e-35 | 125 |
| MS.gene002567.t1 | MTR_3g070970 | 43.284 | 134 | 60 | 3 | 67 | 184 | 73 | 206 | 3.01e-23 | 94.4 |
| MS.gene002567.t1 | MTR_1g093750 | 49.153 | 118 | 53 | 1 | 63 | 173 | 154 | 271 | 6.08e-22 | 92.0 |
| MS.gene002567.t1 | MTR_5g032375 | 36.508 | 126 | 66 | 3 | 56 | 168 | 34 | 158 | 7.41e-14 | 68.2 |
| MS.gene002567.t1 | MTR_5g066080 | 39.535 | 129 | 51 | 2 | 67 | 168 | 37 | 165 | 3.04e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002567.t1 | AT3G56770 | 47.458 | 118 | 56 | 3 | 62 | 174 | 40 | 156 | 2.37e-26 | 101 |
| MS.gene002567.t1 | AT2G40200 | 45.600 | 125 | 59 | 2 | 69 | 184 | 65 | 189 | 4.25e-26 | 101 |
| MS.gene002567.t1 | AT1G68810 | 47.059 | 136 | 64 | 4 | 56 | 184 | 164 | 298 | 2.18e-22 | 94.0 |
| MS.gene002567.t1 | AT2G41130 | 36.686 | 169 | 96 | 3 | 17 | 174 | 11 | 179 | 3.35e-20 | 85.9 |
| MS.gene002567.t1 | AT3G25710 | 41.791 | 134 | 72 | 3 | 56 | 184 | 122 | 254 | 3.04e-19 | 84.7 |
| MS.gene002567.t1 | AT4G38070 | 32.710 | 107 | 68 | 2 | 66 | 172 | 91 | 193 | 4.73e-12 | 63.9 |
Find 37 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTACTAGCTGAGGTTATT+AGG | 0.226217 | 2.1:+69680206 | MS.gene002567:CDS |
| ATCAACAAACTCATTGGTTT+TGG | 0.255474 | 2.1:+69678576 | MS.gene002567:CDS |
| CTTAGATCAGTTAGAAGTTC+TGG | 0.280659 | 2.1:-69680370 | None:intergenic |
| AAGTCCCCTCCAATAATTAA+TGG | 0.304566 | 2.1:+69678622 | MS.gene002567:CDS |
| AATGCCACTTCATATAGATT+TGG | 0.335342 | 2.1:+69678520 | MS.gene002567:CDS |
| TAGTGGCTCTGAAGAATCAT+AGG | 0.340919 | 2.1:+69678677 | MS.gene002567:CDS |
| TGATGCTAACAAAACTTTAG+TGG | 0.343142 | 2.1:+69678660 | MS.gene002567:CDS |
| AAGAGAAGAAACAGAATTAA+TGG | 0.350077 | 2.1:+69678712 | MS.gene002567:CDS |
| TGATAAACTTCAACTACAAT+TGG | 0.375139 | 2.1:+69680402 | MS.gene002567:CDS |
| AAAGTTGAACCATGTGAAAA+TGG | 0.387199 | 2.1:+69680304 | MS.gene002567:CDS |
| TTCACTTCATCATCATCTGT+TGG | 0.414183 | 2.1:-69680283 | None:intergenic |
| GTTTGTATCAACAAACTCAT+TGG | 0.426459 | 2.1:+69678570 | MS.gene002567:CDS |
| TTCTCTCCATTAATTATTGG+AGG | 0.433494 | 2.1:-69678628 | None:intergenic |
| CCAGGAACTGAGTTCTGTAC+TGG | 0.489161 | 2.1:+69680540 | MS.gene002567:intron |
| ACTGAGTTCTGTACTGGAAA+GGG | 0.489265 | 2.1:+69680546 | MS.gene002567:CDS |
| CTCTCCATTAATTATTGGAG+GGG | 0.498785 | 2.1:-69678626 | None:intergenic |
| TATTATACCTTTGGAGAGGA+GGG | 0.509382 | 2.1:-69678763 | None:intergenic |
| ATTCTAGCTCTGATATTTCG+AGG | 0.523502 | 2.1:+69678488 | MS.gene002567:CDS |
| CAAATGAGACTTCAAGAGGT+GGG | 0.540083 | 2.1:+69678548 | MS.gene002567:CDS |
| TCTCTCCATTAATTATTGGA+GGG | 0.544195 | 2.1:-69678627 | None:intergenic |
| TTATTATACCTTTGGAGAGG+AGG | 0.544800 | 2.1:-69678764 | None:intergenic |
| AACTGAGTTCTGTACTGGAA+AGG | 0.553572 | 2.1:+69680545 | MS.gene002567:CDS |
| CAAAGCAACTTTACTAGCTG+AGG | 0.560860 | 2.1:+69680198 | MS.gene002567:CDS |
| AGTGGCTCTGAAGAATCATA+GGG | 0.564496 | 2.1:+69678678 | MS.gene002567:CDS |
| AATGCAGATGAAGCAAGTAA+AGG | 0.565648 | 2.1:+69680250 | MS.gene002567:CDS |
| ACTTGTTCCCTCCTCTCCAA+AGG | 0.568287 | 2.1:+69678756 | MS.gene002567:CDS |
| GGAAAGGGTTTCTACCTCGA+TGG | 0.569167 | 2.1:+69680561 | MS.gene002567:CDS |
| AGCACCAAATCTATATGAAG+TGG | 0.573695 | 2.1:-69678524 | None:intergenic |
| TCAAATGAGACTTCAAGAGG+TGG | 0.607431 | 2.1:+69678547 | MS.gene002567:CDS |
| AGATTATTATACCTTTGGAG+AGG | 0.615783 | 2.1:-69678767 | None:intergenic |
| ATCAACAAGAGCAAAACTCA+TGG | 0.629280 | 2.1:-69680648 | None:intergenic |
| GTTGAACCATGTGAAAATGG+TGG | 0.637388 | 2.1:+69680307 | MS.gene002567:CDS |
| TGCATCTGTTTGCAAAGACG+TGG | 0.639661 | 2.1:-69680601 | None:intergenic |
| GAGAGGAGGGAACAAGTGCA+CGG | 0.657365 | 2.1:-69678750 | None:intergenic |
| GCTTCAAATGAGACTTCAAG+AGG | 0.660687 | 2.1:+69678544 | MS.gene002567:CDS |
| AGAATCATAGGGAAGCAGAG+AGG | 0.725124 | 2.1:+69678689 | MS.gene002567:CDS |
| TCTTAACGAGTAATCCATCG+AGG | 0.765808 | 2.1:-69680575 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAATAAATAAGGT+AGG | + | chr2.1:69679949-69679968 | MS.gene002567:intron | 10.0% |
| !! | CCTTAAAAAATAAATAAATA+AGG | + | chr2.1:69679945-69679964 | MS.gene002567:intron | 10.0% |
| !!! | ATTTTTTAAGGATTATTAAA+TGG | - | chr2.1:69679936-69679955 | None:intergenic | 10.0% |
| !!! | CCTTATTTATTTATTTTTTA+AGG | - | chr2.1:69679948-69679967 | None:intergenic | 10.0% |
| !! | TATAAAAAATACGAAAAGAA+AGG | - | chr2.1:69678794-69678813 | None:intergenic | 15.0% |
| !!! | ATTGTTATCTGATTTTAAAA+AGG | + | chr2.1:69678980-69678999 | MS.gene002567:intron | 15.0% |
| !!! | TAGTATTAATTTATTTGTTG+TGG | + | chr2.1:69679854-69679873 | MS.gene002567:intron | 15.0% |
| !! | AAACTGTAAAAAAGTTCAAT+TGG | - | chr2.1:69678934-69678953 | None:intergenic | 20.0% |
| !! | ACTATAATGTAACATCATAT+TGG | + | chr2.1:69679599-69679618 | MS.gene002567:intron | 20.0% |
| !! | CTGAAAAAATACATTTACTT+AGG | + | chr2.1:69679176-69679195 | MS.gene002567:intron | 20.0% |
| !! | TATCTCTTTAAATATCTTTG+TGG | + | chr2.1:69678867-69678886 | MS.gene002567:intron | 20.0% |
| !! | TATGTACATACTGTTATTAA+TGG | + | chr2.1:69680149-69680168 | MS.gene002567:intron | 20.0% |
| !! | TTTAAGGATTATTAAATGGT+TGG | - | chr2.1:69679932-69679951 | None:intergenic | 20.0% |
| !!! | ATTAATTTATTTGTTGTGGT+GGG | + | chr2.1:69679858-69679877 | MS.gene002567:intron | 20.0% |
| !!! | TATTAATTTATTTGTTGTGG+TGG | + | chr2.1:69679857-69679876 | MS.gene002567:intron | 20.0% |
| !!! | TTTTTCTCTCCATTAATTAT+TGG | - | chr2.1:69678634-69678653 | None:intergenic | 20.0% |
| ! | AAATGAAACAACCTTAGTTT+GGG | - | chr2.1:69679662-69679681 | None:intergenic | 25.0% |
| ! | AACAAATGATTCTTAGTTGT+GGG | + | chr2.1:69679708-69679727 | MS.gene002567:intron | 25.0% |
| ! | AAGAGAAGAAACAGAATTAA+TGG | + | chr2.1:69678712-69678731 | MS.gene002567:CDS | 25.0% |
| ! | AAGGAAGATTATTATACCTT+TGG | - | chr2.1:69678775-69678794 | None:intergenic | 25.0% |
| ! | ATTCCTAATTGCAACTTAAT+TGG | - | chr2.1:69679372-69679391 | None:intergenic | 25.0% |
| ! | ATTGAACAATGTCAACTTAT+TGG | + | chr2.1:69680505-69680524 | MS.gene002567:intron | 25.0% |
| ! | TAAATGAAACAACCTTAGTT+TGG | - | chr2.1:69679663-69679682 | None:intergenic | 25.0% |
| ! | TAACAAATGATTCTTAGTTG+TGG | + | chr2.1:69679707-69679726 | MS.gene002567:intron | 25.0% |
| ! | TGATAAACTTCAACTACAAT+TGG | + | chr2.1:69680402-69680421 | MS.gene002567:CDS | 25.0% |
| !! | TTATAAACATGTTTTACCGA+TGG | + | chr2.1:69678904-69678923 | MS.gene002567:intron | 25.0% |
| AAAGTTGAACCATGTGAAAA+TGG | + | chr2.1:69680304-69680323 | MS.gene002567:CDS | 30.0% | |
| AACTTCAACTACAATTGGTA+AGG | + | chr2.1:69680407-69680426 | MS.gene002567:intron | 30.0% | |
| AAGGGAAGAAATATCAACTT+TGG | + | chr2.1:69680426-69680445 | MS.gene002567:intron | 30.0% | |
| AAGTTCAATTGGTAAACCAT+CGG | - | chr2.1:69678923-69678942 | None:intergenic | 30.0% | |
| ACACAATGATCGAATATGAT+TGG | - | chr2.1:69678822-69678841 | None:intergenic | 30.0% | |
| ACTTCAACTACAATTGGTAA+GGG | + | chr2.1:69680408-69680427 | MS.gene002567:intron | 30.0% | |
| AGGGAAGAAATATCAACTTT+GGG | + | chr2.1:69680427-69680446 | MS.gene002567:intron | 30.0% | |
| ATTGAAATTCATGCAGCATT+TGG | - | chr2.1:69679289-69679308 | None:intergenic | 30.0% | |
| ATTGATGGAAATACAAGCTA+TGG | + | chr2.1:69679233-69679252 | MS.gene002567:intron | 30.0% | |
| GTTTGTATCAACAAACTCAT+TGG | + | chr2.1:69678570-69678589 | MS.gene002567:CDS | 30.0% | |
| TAACTTTATCTGACCAATGA+AGG | + | chr2.1:69679896-69679915 | MS.gene002567:intron | 30.0% | |
| TATGCGTTAGGGTTTAATAT+CGG | + | chr2.1:69680023-69680042 | MS.gene002567:intron | 30.0% | |
| TATTGGAAATAATGTTCACC+AGG | + | chr2.1:69680522-69680541 | MS.gene002567:intron | 30.0% | |
| TCTCTCCATTAATTATTGGA+GGG | - | chr2.1:69678630-69678649 | None:intergenic | 30.0% | |
| TGATGCTAACAAAACTTTAG+TGG | + | chr2.1:69678660-69678679 | MS.gene002567:CDS | 30.0% | |
| TTCTCTCCATTAATTATTGG+AGG | - | chr2.1:69678631-69678650 | None:intergenic | 30.0% | |
| TTGAAATTCATGCAGCATTT+GGG | - | chr2.1:69679288-69679307 | None:intergenic | 30.0% | |
| TTGATGGAAATACAAGCTAT+GGG | + | chr2.1:69679234-69679253 | MS.gene002567:intron | 30.0% | |
| ! | AATGCCACTTCATATAGATT+TGG | + | chr2.1:69678520-69678539 | MS.gene002567:CDS | 30.0% |
| ! | ACACCAATTAAGTTGCAATT+AGG | + | chr2.1:69679366-69679385 | MS.gene002567:intron | 30.0% |
| ! | AGATTATTATACCTTTGGAG+AGG | - | chr2.1:69678770-69678789 | None:intergenic | 30.0% |
| ! | CCTTATATAGTTGACTTTAG+CGG | - | chr2.1:69679569-69679588 | None:intergenic | 30.0% |
| ! | TTGACTGGTCAAATGTATAT+GGG | + | chr2.1:69679541-69679560 | MS.gene002567:intron | 30.0% |
| !! | CAGAAAGAATGATTTGTTGA+GGG | - | chr2.1:69679767-69679786 | None:intergenic | 30.0% |
| !! | GTCATTTACGATGTTGATTT+CGG | + | chr2.1:69680103-69680122 | MS.gene002567:intron | 30.0% |
| !! | TCAGAAAGAATGATTTGTTG+AGG | - | chr2.1:69679768-69679787 | None:intergenic | 30.0% |
| !! | TCTGATTTTAAAAAGGCTAG+CGG | + | chr2.1:69678987-69679006 | MS.gene002567:intron | 30.0% |
| !!! | ATCAACAAACTCATTGGTTT+TGG | + | chr2.1:69678576-69678595 | MS.gene002567:CDS | 30.0% |
| AAGTCCCCTCCAATAATTAA+TGG | + | chr2.1:69678622-69678641 | MS.gene002567:CDS | 35.0% | |
| AATGCAGATGAAGCAAGTAA+AGG | + | chr2.1:69680250-69680269 | MS.gene002567:CDS | 35.0% | |
| ACAGAGACATTTGATATGCT+CGG | - | chr2.1:69679066-69679085 | None:intergenic | 35.0% | |
| AGCACCAAATCTATATGAAG+TGG | - | chr2.1:69678527-69678546 | None:intergenic | 35.0% | |
| AGCTGAAGTTTGAAGATTGA+TGG | + | chr2.1:69679218-69679237 | MS.gene002567:intron | 35.0% | |
| ATCTGACCAATGAAGGAATT+AGG | + | chr2.1:69679903-69679922 | MS.gene002567:intron | 35.0% | |
| CATATACATTTGACCAGTCA+AGG | - | chr2.1:69679542-69679561 | None:intergenic | 35.0% | |
| CCGCTAAAGTCAACTATATA+AGG | + | chr2.1:69679566-69679585 | MS.gene002567:intron | 35.0% | |
| CTCTCCATTAATTATTGGAG+GGG | - | chr2.1:69678629-69678648 | None:intergenic | 35.0% | |
| CTGGTTTCAAATATGCGTTA+GGG | + | chr2.1:69680012-69680031 | MS.gene002567:intron | 35.0% | |
| CTGTTATTAATGGTAGCTGA+TGG | + | chr2.1:69680159-69680178 | MS.gene002567:intron | 35.0% | |
| CTTAGATCAGTTAGAAGTTC+TGG | - | chr2.1:69680373-69680392 | None:intergenic | 35.0% | |
| CTTTAACTCTCAGAATGTGT+TGG | - | chr2.1:69679493-69679512 | None:intergenic | 35.0% | |
| CTTTACTAGCTGAGGTTATT+AGG | + | chr2.1:69680206-69680225 | MS.gene002567:CDS | 35.0% | |
| GCTGATGGTATTCTTATAGA+TGG | + | chr2.1:69680174-69680193 | MS.gene002567:intron | 35.0% | |
| TATTAATAGCTGTCAACAGC+TGG | + | chr2.1:69679796-69679815 | MS.gene002567:intron | 35.0% | |
| TGATGGAAATACAAGCTATG+GGG | + | chr2.1:69679235-69679254 | MS.gene002567:intron | 35.0% | |
| TTAAATTAAGGGTCCTTGAC+TGG | + | chr2.1:69679526-69679545 | MS.gene002567:intron | 35.0% | |
| TTCACTTCATCATCATCTGT+TGG | - | chr2.1:69680286-69680305 | None:intergenic | 35.0% | |
| ! | AAATATCAACTTTGGGAGAC+AGG | + | chr2.1:69680434-69680453 | MS.gene002567:intron | 35.0% |
| ! | AATATCAACTTTGGGAGACA+GGG | + | chr2.1:69680435-69680454 | MS.gene002567:intron | 35.0% |
| ! | AATGATCCACCATTTTCACA+TGG | - | chr2.1:69680316-69680335 | None:intergenic | 35.0% |
| ! | CTTGACTGGTCAAATGTATA+TGG | + | chr2.1:69679540-69679559 | MS.gene002567:intron | 35.0% |
| ! | TATTATACCTTTGGAGAGGA+GGG | - | chr2.1:69678766-69678785 | None:intergenic | 35.0% |
| ! | TCTGGTTTCAAATATGCGTT+AGG | + | chr2.1:69680011-69680030 | MS.gene002567:intron | 35.0% |
| ! | TTATTATACCTTTGGAGAGG+AGG | - | chr2.1:69678767-69678786 | None:intergenic | 35.0% |
| !! | ATTCTAGCTCTGATATTTCG+AGG | + | chr2.1:69678488-69678507 | MS.gene002567:CDS | 35.0% |
| !!! | TTGGTTTTGGATAGTGAGAA+AGG | + | chr2.1:69678589-69678608 | MS.gene002567:CDS | 35.0% |
| AACTGAGTTCTGTACTGGAA+AGG | + | chr2.1:69680545-69680564 | MS.gene002567:CDS | 40.0% | |
| ACATCACCAGCTGAATATTC+TGG | + | chr2.1:69679741-69679760 | MS.gene002567:intron | 40.0% | |
| ACTGAGTTCTGTACTGGAAA+GGG | + | chr2.1:69680546-69680565 | MS.gene002567:CDS | 40.0% | |
| CAAAGCAACTTTACTAGCTG+AGG | + | chr2.1:69680198-69680217 | MS.gene002567:CDS | 40.0% | |
| CAAATGAGACTTCAAGAGGT+GGG | + | chr2.1:69678548-69678567 | MS.gene002567:CDS | 40.0% | |
| CAGAGACATTTGATATGCTC+GGG | - | chr2.1:69679065-69679084 | None:intergenic | 40.0% | |
| GCTTCAAATGAGACTTCAAG+AGG | + | chr2.1:69678544-69678563 | MS.gene002567:CDS | 40.0% | |
| GTTGAACCATGTGAAAATGG+TGG | + | chr2.1:69680307-69680326 | MS.gene002567:CDS | 40.0% | |
| TCAAATGAGACTTCAAGAGG+TGG | + | chr2.1:69678547-69678566 | MS.gene002567:CDS | 40.0% | |
| TCATTCAAAGCGTAGGTCAT+AGG | - | chr2.1:69679983-69680002 | None:intergenic | 40.0% | |
| TCTTAACGAGTAATCCATCG+AGG | - | chr2.1:69680578-69680597 | None:intergenic | 40.0% | |
| TCTTCGATAGTCCCAAACTA+AGG | + | chr2.1:69679648-69679667 | MS.gene002567:intron | 40.0% | |
| TGGTTGCCTAATTCCTTCAT+TGG | - | chr2.1:69679912-69679931 | None:intergenic | 40.0% | |
| ! | AGAATATTCAGCTGGTGATG+TGG | - | chr2.1:69679742-69679761 | None:intergenic | 40.0% |
| ! | CTTTGAATGAAAGGCGTATC+TGG | + | chr2.1:69679993-69680012 | MS.gene002567:intron | 40.0% |
| ! | TGACCTACGCTTTGAATGAA+AGG | + | chr2.1:69679984-69680003 | MS.gene002567:intron | 40.0% |
| !! | ACAATAAGTGCTGAGAAGCA+AGG | + | chr2.1:69679018-69679037 | MS.gene002567:intron | 40.0% |
| !! | AGTGGCTCTGAAGAATCATA+GGG | + | chr2.1:69678678-69678697 | MS.gene002567:CDS | 40.0% |
| !! | TAGTGGCTCTGAAGAATCAT+AGG | + | chr2.1:69678677-69678696 | MS.gene002567:CDS | 40.0% |
| ACGCCTTTCATTCAAAGCGT+AGG | - | chr2.1:69679990-69680009 | None:intergenic | 45.0% | |
| AGAATCATAGGGAAGCAGAG+AGG | + | chr2.1:69678689-69678708 | MS.gene002567:CDS | 45.0% | |
| TGCATCTGTTTGCAAAGACG+TGG | - | chr2.1:69680604-69680623 | None:intergenic | 45.0% | |
| ! | CTCTCAGAATGTGTTGGTGA+TGG | - | chr2.1:69679487-69679506 | None:intergenic | 45.0% |
| !! | AAACATTATAATTAAATTAA+GGG | + | chr2.1:69679515-69679534 | MS.gene002567:intron | 5.0% |
| !! | TAAACATTATAATTAAATTA+AGG | + | chr2.1:69679514-69679533 | MS.gene002567:intron | 5.0% |
| ACTTGTTCCCTCCTCTCCAA+AGG | + | chr2.1:69678756-69678775 | MS.gene002567:CDS | 50.0% | |
| CCAGGAACTGAGTTCTGTAC+TGG | + | chr2.1:69680540-69680559 | MS.gene002567:intron | 50.0% | |
| CCAGTACAGAACTCAGTTCC+TGG | - | chr2.1:69680543-69680562 | None:intergenic | 50.0% | |
| GGAAAGGGTTTCTACCTCGA+TGG | + | chr2.1:69680561-69680580 | MS.gene002567:CDS | 50.0% | |
| TACAAGCTATGGGGCAGAAC+TGG | + | chr2.1:69679244-69679263 | MS.gene002567:intron | 50.0% | |
| TGAGGGCCAGAATATTCAGC+TGG | - | chr2.1:69679750-69679769 | None:intergenic | 50.0% | |
| GAGAGGAGGGAACAAGTGCA+CGG | - | chr2.1:69678753-69678772 | None:intergenic | 55.0% | |
| ! | CAGCTGGTGATGTGGAGTGT+GGG | - | chr2.1:69679734-69679753 | None:intergenic | 55.0% |
| ! | TCAGCTGGTGATGTGGAGTG+TGG | - | chr2.1:69679735-69679754 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 69678484 | 69680669 | 69678484 | ID=MS.gene002567 |
| chr2.1 | mRNA | 69678484 | 69680669 | 69678484 | ID=MS.gene002567.t1;Parent=MS.gene002567 |
| chr2.1 | exon | 69678484 | 69678777 | 69678484 | ID=MS.gene002567.t1.exon1;Parent=MS.gene002567.t1 |
| chr2.1 | CDS | 69678484 | 69678777 | 69678484 | ID=cds.MS.gene002567.t1;Parent=MS.gene002567.t1 |
| chr2.1 | exon | 69680193 | 69680423 | 69680193 | ID=MS.gene002567.t1.exon2;Parent=MS.gene002567.t1 |
| chr2.1 | CDS | 69680193 | 69680423 | 69680193 | ID=cds.MS.gene002567.t1;Parent=MS.gene002567.t1 |
| chr2.1 | exon | 69680544 | 69680669 | 69680544 | ID=MS.gene002567.t1.exon3;Parent=MS.gene002567.t1 |
| chr2.1 | CDS | 69680544 | 69680669 | 69680544 | ID=cds.MS.gene002567.t1;Parent=MS.gene002567.t1 |
| Gene Sequence |
| Protein sequence |