Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002588.t1 | XP_024631505.1 | 84.3 | 381 | 53 | 1 | 1 | 381 | 1 | 374 | 3.40E-162 | 581.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002588.t1 | Q700D9 | 61.4 | 83 | 32 | 0 | 76 | 158 | 3 | 85 | 2.9e-21 | 104.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002588.t1 | A0A072V3K0 | 84.3 | 381 | 53 | 1 | 1 | 381 | 1 | 374 | 2.4e-162 | 581.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene002588.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002588.t1 | MTR_2g016220 | 86.719 | 384 | 38 | 3 | 1 | 381 | 1 | 374 | 0.0 | 667 |
MS.gene002588.t1 | MTR_2g016220 | 85.825 | 388 | 38 | 4 | 1 | 381 | 1 | 378 | 0.0 | 661 |
MS.gene002588.t1 | MTR_2g016220 | 86.508 | 378 | 38 | 3 | 1 | 375 | 1 | 368 | 0.0 | 656 |
MS.gene002588.t1 | MTR_8g086410 | 44.811 | 424 | 147 | 11 | 25 | 381 | 25 | 428 | 1.90e-92 | 284 |
MS.gene002588.t1 | MTR_8g086410 | 44.811 | 424 | 147 | 11 | 25 | 381 | 23 | 426 | 2.06e-92 | 284 |
MS.gene002588.t1 | MTR_8g086410 | 44.084 | 431 | 147 | 12 | 25 | 381 | 25 | 435 | 1.53e-89 | 276 |
MS.gene002588.t1 | MTR_2g084230 | 53.107 | 177 | 67 | 5 | 34 | 197 | 35 | 208 | 6.17e-46 | 160 |
MS.gene002588.t1 | MTR_2g084230 | 53.107 | 177 | 67 | 5 | 34 | 197 | 35 | 208 | 2.43e-45 | 160 |
MS.gene002588.t1 | MTR_7g069660 | 62.385 | 109 | 41 | 0 | 52 | 160 | 27 | 135 | 4.74e-36 | 135 |
MS.gene002588.t1 | MTR_0223s0040 | 63.095 | 84 | 26 | 1 | 84 | 167 | 6 | 84 | 1.63e-29 | 115 |
MS.gene002588.t1 | MTR_2g023580 | 72.464 | 69 | 19 | 0 | 88 | 156 | 47 | 115 | 4.60e-29 | 113 |
MS.gene002588.t1 | MTR_1g112370 | 64.198 | 81 | 25 | 2 | 78 | 158 | 7 | 83 | 4.52e-28 | 112 |
MS.gene002588.t1 | MTR_3g450310 | 55.405 | 74 | 33 | 0 | 79 | 152 | 2 | 75 | 1.01e-22 | 95.5 |
MS.gene002588.t1 | MTR_1g021520 | 57.500 | 80 | 29 | 2 | 88 | 164 | 120 | 197 | 1.76e-19 | 88.2 |
MS.gene002588.t1 | MTR_1g080330 | 56.579 | 76 | 32 | 1 | 77 | 152 | 157 | 231 | 2.47e-19 | 87.4 |
MS.gene002588.t1 | MTR_1g080330 | 56.579 | 76 | 32 | 1 | 77 | 152 | 157 | 231 | 3.67e-19 | 88.6 |
MS.gene002588.t1 | MTR_7g098250 | 67.857 | 56 | 18 | 0 | 97 | 152 | 263 | 318 | 3.85e-19 | 89.4 |
MS.gene002588.t1 | MTR_6g071625 | 65.517 | 58 | 20 | 0 | 95 | 152 | 201 | 258 | 5.02e-19 | 87.8 |
MS.gene002588.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 97 | 152 | 219 | 274 | 5.81e-19 | 86.7 |
MS.gene002588.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 97 | 152 | 219 | 274 | 1.16e-18 | 86.3 |
MS.gene002588.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 97 | 152 | 219 | 274 | 1.42e-18 | 87.4 |
MS.gene002588.t1 | MTR_7g115530 | 66.071 | 56 | 19 | 0 | 97 | 152 | 219 | 274 | 2.02e-18 | 85.9 |
MS.gene002588.t1 | MTR_8g066310 | 50.602 | 83 | 32 | 1 | 95 | 177 | 172 | 245 | 2.44e-18 | 85.9 |
MS.gene002588.t1 | MTR_5g029470 | 58.571 | 70 | 28 | 1 | 95 | 163 | 218 | 287 | 2.67e-18 | 86.3 |
MS.gene002588.t1 | MTR_3g064840 | 65.517 | 58 | 20 | 0 | 95 | 152 | 273 | 330 | 4.59e-18 | 85.9 |
MS.gene002588.t1 | MTR_7g115530 | 64.286 | 56 | 20 | 0 | 97 | 152 | 219 | 274 | 4.33e-17 | 80.9 |
MS.gene002588.t1 | MTR_7g115530 | 67.308 | 52 | 17 | 0 | 97 | 148 | 219 | 270 | 5.30e-17 | 80.9 |
MS.gene002588.t1 | MTR_7g093030 | 54.839 | 62 | 28 | 0 | 92 | 153 | 208 | 269 | 1.41e-16 | 79.7 |
MS.gene002588.t1 | MTR_7g093030 | 54.839 | 62 | 28 | 0 | 92 | 153 | 208 | 269 | 2.86e-16 | 80.1 |
MS.gene002588.t1 | MTR_6g032990 | 60.377 | 53 | 21 | 0 | 97 | 149 | 43 | 95 | 4.90e-16 | 79.3 |
MS.gene002588.t1 | MTR_5g027440 | 49.315 | 73 | 37 | 0 | 77 | 149 | 6 | 78 | 6.66e-16 | 77.8 |
MS.gene002588.t1 | MTR_1g053835 | 51.250 | 80 | 35 | 2 | 73 | 152 | 239 | 314 | 7.39e-16 | 79.0 |
MS.gene002588.t1 | MTR_5g041350 | 50.769 | 65 | 30 | 1 | 90 | 152 | 7 | 71 | 9.57e-16 | 78.2 |
MS.gene002588.t1 | MTR_2g086450 | 57.143 | 56 | 24 | 0 | 97 | 152 | 46 | 101 | 1.16e-15 | 78.2 |
MS.gene002588.t1 | MTR_2g027860 | 65.455 | 55 | 19 | 0 | 98 | 152 | 51 | 105 | 2.36e-15 | 76.6 |
MS.gene002588.t1 | MTR_7g088070 | 61.818 | 55 | 21 | 0 | 98 | 152 | 52 | 106 | 3.18e-15 | 75.5 |
MS.gene002588.t1 | MTR_7g088070 | 61.818 | 55 | 21 | 0 | 98 | 152 | 52 | 106 | 3.29e-15 | 75.5 |
MS.gene002588.t1 | MTR_1g053830 | 54.545 | 55 | 25 | 0 | 98 | 152 | 20 | 74 | 4.40e-15 | 70.9 |
MS.gene002588.t1 | MTR_1g090670 | 57.143 | 56 | 24 | 0 | 97 | 152 | 45 | 100 | 1.56e-14 | 73.9 |
MS.gene002588.t1 | MTR_2g027800 | 57.143 | 56 | 24 | 0 | 97 | 152 | 40 | 95 | 1.98e-14 | 73.9 |
MS.gene002588.t1 | MTR_2g027800 | 58.491 | 53 | 22 | 0 | 97 | 149 | 40 | 92 | 3.36e-14 | 72.8 |
MS.gene002588.t1 | MTR_6g444980 | 55.357 | 56 | 25 | 0 | 97 | 152 | 36 | 91 | 3.56e-14 | 73.6 |
MS.gene002588.t1 | MTR_6g444980 | 55.357 | 56 | 25 | 0 | 97 | 152 | 36 | 91 | 3.87e-14 | 73.2 |
MS.gene002588.t1 | MTR_1g053800 | 60.377 | 53 | 21 | 0 | 98 | 150 | 179 | 231 | 4.70e-14 | 72.8 |
MS.gene002588.t1 | MTR_4g021790 | 39.796 | 98 | 54 | 3 | 52 | 149 | 128 | 220 | 5.63e-14 | 72.0 |
MS.gene002588.t1 | MTR_4g081710 | 53.571 | 56 | 26 | 0 | 97 | 152 | 18 | 73 | 7.01e-14 | 72.4 |
MS.gene002588.t1 | MTR_7g068600 | 59.322 | 59 | 21 | 1 | 98 | 153 | 15 | 73 | 7.54e-14 | 70.9 |
MS.gene002588.t1 | MTR_4g021855 | 45.946 | 74 | 34 | 2 | 76 | 149 | 153 | 220 | 1.28e-12 | 68.2 |
MS.gene002588.t1 | MTR_7g093010 | 56.604 | 53 | 23 | 0 | 98 | 150 | 215 | 267 | 1.14e-11 | 65.9 |
MS.gene002588.t1 | MTR_2g450070 | 52.727 | 55 | 25 | 1 | 95 | 149 | 212 | 265 | 3.58e-11 | 65.1 |
MS.gene002588.t1 | MTR_2g450070 | 52.727 | 55 | 25 | 1 | 95 | 149 | 212 | 265 | 3.72e-11 | 65.1 |
MS.gene002588.t1 | MTR_4g121020 | 54.545 | 55 | 24 | 1 | 95 | 149 | 110 | 163 | 6.39e-11 | 64.3 |
MS.gene002588.t1 | MTR_4g121020 | 54.545 | 55 | 24 | 1 | 95 | 149 | 214 | 267 | 6.64e-11 | 64.3 |
MS.gene002588.t1 | MTR_4g121020 | 54.545 | 55 | 24 | 1 | 95 | 149 | 214 | 267 | 6.75e-11 | 64.3 |
MS.gene002588.t1 | MTR_1g032570 | 33.898 | 118 | 49 | 3 | 60 | 149 | 67 | 183 | 7.88e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002588.t1 | AT2G38300 | 68.750 | 80 | 25 | 0 | 82 | 161 | 40 | 119 | 7.82e-33 | 126 |
MS.gene002588.t1 | AT2G40260 | 77.333 | 75 | 17 | 0 | 81 | 155 | 67 | 141 | 8.21e-31 | 122 |
MS.gene002588.t1 | AT4G04605 | 62.353 | 85 | 32 | 0 | 88 | 172 | 6 | 90 | 4.21e-29 | 112 |
MS.gene002588.t1 | AT2G42660 | 51.240 | 121 | 33 | 1 | 34 | 154 | 14 | 108 | 6.37e-29 | 113 |
MS.gene002588.t1 | AT1G14600 | 61.446 | 83 | 32 | 0 | 76 | 158 | 3 | 85 | 1.60e-28 | 112 |
MS.gene002588.t1 | AT2G02060 | 61.728 | 81 | 27 | 1 | 73 | 149 | 2 | 82 | 3.86e-26 | 105 |
MS.gene002588.t1 | AT2G02060 | 61.728 | 81 | 27 | 1 | 73 | 149 | 2 | 82 | 3.86e-26 | 105 |
MS.gene002588.t1 | AT4G04580 | 50.617 | 81 | 40 | 0 | 88 | 168 | 6 | 86 | 3.31e-20 | 87.0 |
MS.gene002588.t1 | AT5G42630 | 63.492 | 63 | 23 | 0 | 95 | 157 | 104 | 166 | 1.82e-19 | 86.7 |
MS.gene002588.t1 | AT4G04555 | 56.944 | 72 | 30 | 1 | 85 | 155 | 2 | 73 | 1.96e-19 | 83.2 |
MS.gene002588.t1 | AT5G42630 | 63.492 | 63 | 23 | 0 | 95 | 157 | 104 | 166 | 1.97e-19 | 87.8 |
MS.gene002588.t1 | AT1G32240 | 65.517 | 58 | 20 | 0 | 95 | 152 | 212 | 269 | 3.13e-18 | 85.5 |
MS.gene002588.t1 | AT4G17695 | 57.534 | 73 | 26 | 1 | 95 | 162 | 163 | 235 | 3.30e-18 | 85.1 |
MS.gene002588.t1 | AT1G32240 | 65.517 | 58 | 20 | 0 | 95 | 152 | 212 | 269 | 3.95e-18 | 85.5 |
MS.gene002588.t1 | AT5G16560 | 65.517 | 58 | 20 | 0 | 95 | 152 | 218 | 275 | 4.17e-18 | 85.5 |
MS.gene002588.t1 | AT4G28610 | 65.455 | 55 | 19 | 0 | 98 | 152 | 227 | 281 | 1.68e-17 | 84.0 |
MS.gene002588.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 98 | 152 | 240 | 294 | 2.65e-17 | 82.4 |
MS.gene002588.t1 | AT5G29000 | 65.455 | 55 | 19 | 0 | 98 | 152 | 190 | 244 | 2.70e-17 | 82.8 |
MS.gene002588.t1 | AT5G29000 | 65.455 | 55 | 19 | 0 | 98 | 152 | 190 | 244 | 2.70e-17 | 82.8 |
MS.gene002588.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 98 | 152 | 200 | 254 | 3.12e-17 | 83.2 |
MS.gene002588.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 98 | 152 | 200 | 254 | 3.12e-17 | 83.2 |
MS.gene002588.t1 | AT5G29000 | 60.656 | 61 | 24 | 0 | 92 | 152 | 227 | 287 | 3.30e-17 | 82.0 |
MS.gene002588.t1 | AT3G04450 | 61.818 | 55 | 21 | 0 | 98 | 152 | 240 | 294 | 3.44e-17 | 83.2 |
MS.gene002588.t1 | AT5G29000 | 60.656 | 61 | 24 | 0 | 92 | 152 | 227 | 287 | 3.88e-17 | 82.8 |
MS.gene002588.t1 | AT3G13040 | 67.273 | 55 | 18 | 0 | 98 | 152 | 243 | 297 | 2.44e-16 | 80.5 |
MS.gene002588.t1 | AT3G13040 | 67.273 | 55 | 18 | 0 | 98 | 152 | 243 | 297 | 2.44e-16 | 80.5 |
MS.gene002588.t1 | AT3G13040 | 67.273 | 55 | 18 | 0 | 98 | 152 | 243 | 297 | 2.44e-16 | 80.5 |
MS.gene002588.t1 | AT5G45580 | 56.897 | 58 | 25 | 0 | 92 | 149 | 3 | 60 | 3.15e-16 | 78.6 |
MS.gene002588.t1 | AT5G45580 | 56.897 | 58 | 25 | 0 | 92 | 149 | 19 | 76 | 4.23e-16 | 78.2 |
MS.gene002588.t1 | AT2G01060 | 65.455 | 55 | 19 | 0 | 98 | 152 | 17 | 71 | 1.20e-15 | 77.0 |
MS.gene002588.t1 | AT3G12730 | 38.739 | 111 | 59 | 3 | 97 | 203 | 24 | 129 | 1.31e-15 | 75.9 |
MS.gene002588.t1 | AT1G79430 | 40.777 | 103 | 51 | 3 | 97 | 197 | 35 | 129 | 1.47e-15 | 77.8 |
MS.gene002588.t1 | AT2G06020 | 32.609 | 184 | 109 | 6 | 51 | 220 | 39 | 221 | 1.99e-15 | 76.6 |
MS.gene002588.t1 | AT3G04030 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 2.20e-15 | 77.4 |
MS.gene002588.t1 | AT3G04030 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 2.54e-15 | 77.4 |
MS.gene002588.t1 | AT2G20400 | 63.636 | 55 | 20 | 0 | 98 | 152 | 233 | 287 | 4.89e-15 | 76.3 |
MS.gene002588.t1 | AT2G20400 | 63.636 | 55 | 20 | 0 | 98 | 152 | 233 | 287 | 5.01e-15 | 76.3 |
MS.gene002588.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 6.81e-15 | 75.9 |
MS.gene002588.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 6.81e-15 | 75.9 |
MS.gene002588.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 7.82e-15 | 75.9 |
MS.gene002588.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 7.82e-15 | 75.9 |
MS.gene002588.t1 | AT5G18240 | 53.571 | 56 | 26 | 0 | 97 | 152 | 46 | 101 | 7.82e-15 | 75.9 |
MS.gene002588.t1 | AT4G13640 | 56.604 | 53 | 23 | 0 | 97 | 149 | 38 | 90 | 1.39e-14 | 73.9 |
MS.gene002588.t1 | AT4G13640 | 56.604 | 53 | 23 | 0 | 97 | 149 | 38 | 90 | 1.44e-14 | 73.9 |
MS.gene002588.t1 | AT3G24120 | 56.604 | 53 | 23 | 0 | 97 | 149 | 42 | 94 | 1.62e-14 | 73.9 |
MS.gene002588.t1 | AT3G24120 | 56.604 | 53 | 23 | 0 | 97 | 149 | 42 | 94 | 1.64e-14 | 73.9 |
MS.gene002588.t1 | AT5G06800 | 56.364 | 55 | 24 | 0 | 98 | 152 | 194 | 248 | 2.97e-14 | 72.8 |
MS.gene002588.t1 | AT1G69580 | 51.667 | 60 | 29 | 0 | 97 | 156 | 35 | 94 | 5.80e-14 | 72.8 |
MS.gene002588.t1 | AT1G69580 | 51.667 | 60 | 29 | 0 | 97 | 156 | 35 | 94 | 6.35e-14 | 72.8 |
MS.gene002588.t1 | AT5G06800 | 50.769 | 65 | 31 | 1 | 98 | 161 | 194 | 258 | 7.35e-14 | 72.8 |
MS.gene002588.t1 | AT5G06800 | 56.364 | 55 | 24 | 0 | 98 | 152 | 194 | 248 | 9.26e-14 | 72.4 |
MS.gene002588.t1 | AT3G04030 | 51.786 | 56 | 26 | 1 | 97 | 152 | 46 | 100 | 6.31e-13 | 70.1 |
MS.gene002588.t1 | AT3G62670 | 53.333 | 60 | 24 | 1 | 94 | 149 | 209 | 268 | 2.10e-12 | 68.6 |
MS.gene002588.t1 | AT5G59570 | 55.357 | 56 | 24 | 1 | 94 | 149 | 139 | 193 | 8.36e-12 | 65.9 |
MS.gene002588.t1 | AT5G59570 | 55.357 | 56 | 24 | 1 | 94 | 149 | 139 | 193 | 8.36e-12 | 65.9 |
MS.gene002588.t1 | AT3G46640 | 54.545 | 55 | 24 | 1 | 95 | 149 | 143 | 196 | 4.53e-11 | 63.9 |
MS.gene002588.t1 | AT3G46640 | 54.545 | 55 | 24 | 1 | 95 | 149 | 143 | 196 | 4.53e-11 | 63.9 |
MS.gene002588.t1 | AT4G37180 | 51.667 | 60 | 29 | 0 | 90 | 149 | 204 | 263 | 4.64e-11 | 63.9 |
MS.gene002588.t1 | AT1G25550 | 38.596 | 114 | 57 | 2 | 98 | 211 | 211 | 311 | 4.71e-11 | 63.9 |
MS.gene002588.t1 | AT3G16857 | 39.796 | 98 | 55 | 2 | 55 | 149 | 123 | 219 | 4.85e-11 | 64.7 |
MS.gene002588.t1 | AT4G37180 | 51.667 | 60 | 29 | 0 | 90 | 149 | 211 | 270 | 5.39e-11 | 63.9 |
MS.gene002588.t1 | AT3G46640 | 54.545 | 55 | 24 | 1 | 95 | 149 | 143 | 196 | 5.53e-11 | 63.5 |
MS.gene002588.t1 | AT3G16857 | 39.796 | 98 | 55 | 2 | 55 | 149 | 193 | 289 | 7.18e-11 | 64.3 |
MS.gene002588.t1 | AT3G16857 | 39.796 | 98 | 55 | 2 | 55 | 149 | 193 | 289 | 8.09e-11 | 64.3 |
Find 68 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCAAGTATTGTTGCTTCA+TGG | 0.216171 | 2.1:-69446377 | None:intergenic |
GGAAGAGTTGCAAGGTTCTT+TGG | 0.287029 | 2.1:-69449673 | None:intergenic |
AGCAAGAAACTTGACGAGTT+TGG | 0.326402 | 2.1:+69447108 | MS.gene002588:CDS |
CTTGTGTTGACCTCTGTGTT+TGG | 0.327855 | 2.1:-69448678 | None:intergenic |
CTCAAACCTAGTTGCAAATC+AGG | 0.328852 | 2.1:-69449884 | None:intergenic |
ATGATCAATCTTACCATCAT+TGG | 0.345938 | 2.1:-69449921 | None:intergenic |
TTCCATTCAACTTTCTCAAT+AGG | 0.352795 | 2.1:-69449603 | None:intergenic |
AGAAGGAAGGGCATGGCTGC+AGG | 0.377318 | 2.1:-69448819 | None:intergenic |
GATGAAAGTAATACTTCATC+TGG | 0.379913 | 2.1:+69446300 | MS.gene002588:CDS |
TCATGTCAAGTCTCACTTGC+AGG | 0.383436 | 2.1:+69446742 | MS.gene002588:CDS |
AATGTTACCTTGATCCGAAA+TGG | 0.391625 | 2.1:-69449723 | None:intergenic |
TAGCTTAGTGCTAATTTCCT+TGG | 0.409360 | 2.1:-69449954 | None:intergenic |
TGAAGCCCCATTTCGGATCA+AGG | 0.411464 | 2.1:+69449716 | MS.gene002588:CDS |
ATGTTACCTTGATCCGAAAT+GGG | 0.413170 | 2.1:-69449722 | None:intergenic |
TCTGTGAATAATTACGTGAT+AGG | 0.420426 | 2.1:-69448843 | None:intergenic |
CCAATGTAACTTCTAAAACT+TGG | 0.423539 | 2.1:+69449574 | MS.gene002588:CDS |
CCACCTTAACCTAGGCATCT+TGG | 0.426029 | 2.1:-69446517 | None:intergenic |
CATTAGCTGAAGCACCAACT+TGG | 0.437054 | 2.1:-69446696 | None:intergenic |
CATGAACAATATTCATCAAC+CGG | 0.438171 | 2.1:+69449533 | MS.gene002588:CDS |
AGAAATTGGGTTGGTGTCAC+GGG | 0.446810 | 2.1:-69449480 | None:intergenic |
GATCCAAGATGCCTAGGTTA+AGG | 0.450407 | 2.1:+69446514 | MS.gene002588:CDS |
TTCTTACCTGATTTGCAACT+AGG | 0.452743 | 2.1:+69449878 | MS.gene002588:CDS |
CAACACATCATTATGATTCA+AGG | 0.454970 | 2.1:+69448872 | MS.gene002588:CDS |
ATATTGTTCATGATTTCAAA+TGG | 0.455511 | 2.1:-69449522 | None:intergenic |
AAGAAATTGGGTTGGTGTCA+CGG | 0.469951 | 2.1:-69449481 | None:intergenic |
CATGCTGTTGATAGACTTGG+TGG | 0.470120 | 2.1:+69446567 | MS.gene002588:CDS |
TACTTTCATCAACAAGCTGC+AGG | 0.473446 | 2.1:-69446287 | None:intergenic |
TTCATCAACCGGAATTCAAA+AGG | 0.482722 | 2.1:+69449544 | MS.gene002588:CDS |
CTAGGTTTGAGTCACACATA+TGG | 0.486414 | 2.1:+69449896 | MS.gene002588:CDS |
CAACATTTCAAGATGGGTAA+TGG | 0.492659 | 2.1:+69448733 | MS.gene002588:CDS |
AATGAGAAGGAAAATATTGA+AGG | 0.500567 | 2.1:+69446432 | MS.gene002588:CDS |
TTGCATGCTGTTGATAGACT+TGG | 0.505073 | 2.1:+69446564 | MS.gene002588:CDS |
GGGCATGGCTGCAGGAGAGT+TGG | 0.508149 | 2.1:-69448811 | None:intergenic |
CACACATATGGAACCAATGA+TGG | 0.515353 | 2.1:+69449908 | MS.gene002588:CDS |
AACCTATTGAGAAAGTTGAA+TGG | 0.520109 | 2.1:+69449601 | MS.gene002588:CDS |
TCTAAGTCAACATTTCAAGA+TGG | 0.523487 | 2.1:+69448726 | MS.gene002588:CDS |
CTAAGTCAACATTTCAAGAT+GGG | 0.525690 | 2.1:+69448727 | MS.gene002588:CDS |
TTCTCTTCAAGAAATTGGGT+TGG | 0.528659 | 2.1:-69449489 | None:intergenic |
GAAGGAAATAATGAAAGAAG+AGG | 0.529416 | 2.1:+69446471 | MS.gene002588:CDS |
ATGTTAGATCCAAGATGCCT+AGG | 0.541984 | 2.1:+69446508 | MS.gene002588:CDS |
ATTAGCTGAAGCACCAACTT+GGG | 0.542418 | 2.1:-69446695 | None:intergenic |
GCTACAAACATGTCAGAAGA+AGG | 0.543883 | 2.1:+69446228 | None:intergenic |
CTGTGAATAATTACGTGATA+GGG | 0.547778 | 2.1:-69448842 | None:intergenic |
AAAATGTAGCAATAAACTTG+TGG | 0.560518 | 2.1:-69449694 | None:intergenic |
GGTAATTGTAGATCAAGAGA+AGG | 0.560724 | 2.1:+69446453 | MS.gene002588:CDS |
GAATGAGAATGAGAATGAGA+AGG | 0.569100 | 2.1:+69446419 | MS.gene002588:CDS |
TGCAGGAGCAACACCCAAGT+TGG | 0.569639 | 2.1:+69446682 | MS.gene002588:intron |
CAGAGGTCAACACAAGAAGT+AGG | 0.571568 | 2.1:+69448685 | MS.gene002588:CDS |
AAATAATGAAAGAAGAGGCA+AGG | 0.577829 | 2.1:+69446476 | MS.gene002588:CDS |
CCAAGATGCCTAGGTTAAGG+TGG | 0.584488 | 2.1:+69446517 | MS.gene002588:CDS |
TGATCTCTAGGCACCAACAT+TGG | 0.600420 | 2.1:+69449427 | MS.gene002588:intron |
AAACTTGTGGAAGAGTTGCA+AGG | 0.606173 | 2.1:-69449681 | None:intergenic |
CATTTCAAGATGGGTAATGG+TGG | 0.608538 | 2.1:+69448736 | MS.gene002588:CDS |
TGATCATTGCAGAGAGACCA+AGG | 0.608794 | 2.1:+69449937 | MS.gene002588:CDS |
TAACAATTATATTCAGAGTG+AGG | 0.608803 | 2.1:+69446263 | MS.gene002588:CDS |
ATAATTACGTGATAGGGAGA+AGG | 0.608918 | 2.1:-69448836 | None:intergenic |
TGTTACCTTGATCCGAAATG+GGG | 0.609773 | 2.1:-69449721 | None:intergenic |
GATGATTGAAGTGCCAATGT+TGG | 0.609822 | 2.1:-69449440 | None:intergenic |
AAACTTGACGAGTTTGGACA+AGG | 0.614003 | 2.1:+69447114 | MS.gene002588:CDS |
TACGTGATAGGGAGAAGGAA+GGG | 0.624905 | 2.1:-69448831 | None:intergenic |
TTACGTGATAGGGAGAAGGA+AGG | 0.629192 | 2.1:-69448832 | None:intergenic |
TCAGGAGTCCACCTTAACCT+AGG | 0.637415 | 2.1:-69446525 | None:intergenic |
CCATGAAGCAACAATACTTG+AGG | 0.647167 | 2.1:+69446377 | MS.gene002588:CDS |
GATAGGGAGAAGGAAGGGCA+TGG | 0.649948 | 2.1:-69448826 | None:intergenic |
GTCACGGGTGCAAATCTGAA+AGG | 0.667252 | 2.1:-69449465 | None:intergenic |
CTTCAGCTAATGAATGTGAG+AGG | 0.670692 | 2.1:+69446707 | MS.gene002588:CDS |
AGGAGAGTTGGATAATACTG+AGG | 0.696332 | 2.1:-69448799 | None:intergenic |
CAGTACTATGCCAAACACAG+AGG | 0.729891 | 2.1:+69448668 | MS.gene002588:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATAGTGAAAATTAATATT+TGG | + | chr2.1:69446648-69446667 | MS.gene002588:intron | 10.0% |
!! | ATTAATACAATTAAAATACA+TGG | - | chr2.1:69449037-69449056 | None:intergenic | 10.0% |
!! | TGATTAATATAGTTTAATTA+AGG | - | chr2.1:69448930-69448949 | None:intergenic | 10.0% |
!!! | AGTTTTAATATTTACTTTAT+GGG | + | chr2.1:69447461-69447480 | MS.gene002588:intron | 10.0% |
!!! | CTAAATTTAAAGTTTTAAAA+TGG | - | chr2.1:69449329-69449348 | None:intergenic | 10.0% |
!!! | TTTATTACAATTTTTGTATT+TGG | + | chr2.1:69448582-69448601 | MS.gene002588:intron | 10.0% |
!! | AAGTAAATATTAAAACTCAA+TGG | - | chr2.1:69447458-69447477 | None:intergenic | 15.0% |
!! | TTGTAATAAATACATTTCAT+AGG | - | chr2.1:69448572-69448591 | None:intergenic | 15.0% |
!!! | AAATTGTTATCAAAATTTTG+CGG | + | chr2.1:69447194-69447213 | MS.gene002588:intron | 15.0% |
!!! | AATTTTGATAACAATTTTTG+AGG | - | chr2.1:69447191-69447210 | None:intergenic | 15.0% |
!!! | ATAATCATTAGATTATTTTG+TGG | - | chr2.1:69447063-69447082 | None:intergenic | 15.0% |
!!! | CAATTTTGTATTCATTTTTT+TGG | - | chr2.1:69447150-69447169 | None:intergenic | 15.0% |
!!! | GAGTTTTAATATTTACTTTA+TGG | + | chr2.1:69447460-69447479 | MS.gene002588:intron | 15.0% |
!!! | GATGTATAGTTTTATTTTTT+TGG | - | chr2.1:69448431-69448450 | None:intergenic | 15.0% |
!!! | TAATCATTAGATTATTTTGT+GGG | - | chr2.1:69447062-69447081 | None:intergenic | 15.0% |
!!! | TATAGTTTTATTTTTTTGGT+TGG | - | chr2.1:69448427-69448446 | None:intergenic | 15.0% |
!!! | TTTCTCATTTTATATATTGA+TGG | - | chr2.1:69447851-69447870 | None:intergenic | 15.0% |
!! | AATTTCTTGAAGAGAAAAAT+TGG | + | chr2.1:69449496-69449515 | MS.gene002588:CDS | 20.0% |
!! | ATATTCGAAAGAAATTCTAA+AGG | - | chr2.1:69447784-69447803 | None:intergenic | 20.0% |
!! | ATATTGTTCATGATTTCAAA+TGG | - | chr2.1:69449525-69449544 | None:intergenic | 20.0% |
!! | CAAAACAACAATATCTAAAA+AGG | + | chr2.1:69448506-69448525 | MS.gene002588:intron | 20.0% |
!! | GTAAAAAAAGAAATGAAAGT+TGG | + | chr2.1:69449239-69449258 | MS.gene002588:intron | 20.0% |
!! | TCTTAAACTTCAATTTATTG+TGG | - | chr2.1:69446770-69446789 | None:intergenic | 20.0% |
!! | TTATATGAGAAACTCTTATT+TGG | - | chr2.1:69448025-69448044 | None:intergenic | 20.0% |
!!! | AATGCAAAATTGCTTATTTT+GGG | - | chr2.1:69447525-69447544 | None:intergenic | 20.0% |
!!! | AATTTTTCTCTTCAAGAAAT+TGG | - | chr2.1:69449497-69449516 | None:intergenic | 20.0% |
!!! | AGTGTAATAAATTTTGCTTA+TGG | - | chr2.1:69447030-69447049 | None:intergenic | 20.0% |
!!! | ATTTTTCTCTTCAAGAAATT+GGG | - | chr2.1:69449496-69449515 | None:intergenic | 20.0% |
!!! | TGAAGATTTTTTTATCTCAA+CGG | - | chr2.1:69446976-69446995 | None:intergenic | 20.0% |
!!! | TGTAGTTTTTTTTTTCTTCT+TGG | + | chr2.1:69447723-69447742 | MS.gene002588:intron | 20.0% |
!!! | TTTGTATTCATTTTTTTGGA+TGG | - | chr2.1:69447146-69447165 | None:intergenic | 20.0% |
! | AAAATGTAGCAATAAACTTG+TGG | - | chr2.1:69449697-69449716 | None:intergenic | 25.0% |
! | AACAAAATCTAAGAAGGAAA+TGG | + | chr2.1:69447303-69447322 | MS.gene002588:intron | 25.0% |
! | AATGAGAAGGAAAATATTGA+AGG | + | chr2.1:69446432-69446451 | MS.gene002588:CDS | 25.0% |
! | AATTTCATTTAGTAGATGGT+AGG | - | chr2.1:69449012-69449031 | None:intergenic | 25.0% |
! | AGCATTTAGACACAAAATTT+AGG | + | chr2.1:69447887-69447906 | MS.gene002588:intron | 25.0% |
! | ATATTAGTATTCAGTTCAAG+TGG | + | chr2.1:69446846-69446865 | MS.gene002588:intron | 25.0% |
! | ATTAAAAAATGGGAGTAAAG+CGG | + | chr2.1:69447816-69447835 | MS.gene002588:intron | 25.0% |
! | ATTAAGGAAAACAAGATGAA+AGG | - | chr2.1:69448914-69448933 | None:intergenic | 25.0% |
! | GGTTAATTTCATTTAGTAGA+TGG | - | chr2.1:69449016-69449035 | None:intergenic | 25.0% |
! | TAACAATTATATTCAGAGTG+AGG | + | chr2.1:69446263-69446282 | MS.gene002588:CDS | 25.0% |
! | TATTTGATGTCTTGTATCAA+AGG | - | chr2.1:69448232-69448251 | None:intergenic | 25.0% |
! | TGAACTGAATACTAATATTG+AGG | - | chr2.1:69446844-69446863 | None:intergenic | 25.0% |
! | TGTTAAGTAGAAAACTATAC+AGG | - | chr2.1:69448628-69448647 | None:intergenic | 25.0% |
!! | CAAAATAAGCAATTTTGCAT+TGG | + | chr2.1:69447524-69447543 | MS.gene002588:intron | 25.0% |
!! | CAATGCAAAATTGCTTATTT+TGG | - | chr2.1:69447526-69447545 | None:intergenic | 25.0% |
!! | TCTACTATACCATTTTGTTA+CGG | + | chr2.1:69448136-69448155 | MS.gene002588:intron | 25.0% |
!! | TTCAAAGATTTTGTGGAAAA+AGG | - | chr2.1:69447430-69447449 | None:intergenic | 25.0% |
!!! | ATGCGTTTTGTTTGTTTTTT+GGG | - | chr2.1:69448079-69448098 | None:intergenic | 25.0% |
!!! | CCTTCTTAGATTTTGTTTTT+GGG | - | chr2.1:69447300-69447319 | None:intergenic | 25.0% |
!!! | CTTCTTAGATTTTGTTTTTG+GGG | - | chr2.1:69447299-69447318 | None:intergenic | 25.0% |
!!! | TATGCGTTTTGTTTGTTTTT+TGG | - | chr2.1:69448080-69448099 | None:intergenic | 25.0% |
!!! | TCCTTCTTAGATTTTGTTTT+TGG | - | chr2.1:69447301-69447320 | None:intergenic | 25.0% |
!!! | TTGTTTTGTTATGTTGACTT+TGG | - | chr2.1:69448494-69448513 | None:intergenic | 25.0% |
!!! | TTTTTTTTCTTCTTGGTCAA+GGG | + | chr2.1:69447730-69447749 | MS.gene002588:intron | 25.0% |
!!! | TTTTTTTTTCTTCTTGGTCA+AGG | + | chr2.1:69447729-69447748 | MS.gene002588:intron | 25.0% |
AAAAAAGAATGATGAAGCTC+AGG | - | chr2.1:69446546-69446565 | None:intergenic | 30.0% | |
AAAACTATACAGGCTAACAA+TGG | - | chr2.1:69448618-69448637 | None:intergenic | 30.0% | |
AAACTATACAGGCTAACAAT+GGG | - | chr2.1:69448617-69448636 | None:intergenic | 30.0% | |
AAATAATGAAAGAAGAGGCA+AGG | + | chr2.1:69446476-69446495 | MS.gene002588:CDS | 30.0% | |
AACCTATTGAGAAAGTTGAA+TGG | + | chr2.1:69449601-69449620 | MS.gene002588:CDS | 30.0% | |
AAGTGATGAAGGAAGAATTT+AGG | + | chr2.1:69447371-69447390 | MS.gene002588:intron | 30.0% | |
ACTTACACCTAAAACTTATC+TGG | - | chr2.1:69447335-69447354 | None:intergenic | 30.0% | |
AGGACGATGAAATAAAACAT+TGG | - | chr2.1:69448552-69448571 | None:intergenic | 30.0% | |
AGTGATGAAGGAAGAATTTA+GGG | + | chr2.1:69447372-69447391 | MS.gene002588:intron | 30.0% | |
ATGATCAATCTTACCATCAT+TGG | - | chr2.1:69449924-69449943 | None:intergenic | 30.0% | |
CAACACATCATTATGATTCA+AGG | + | chr2.1:69448872-69448891 | MS.gene002588:CDS | 30.0% | |
CATGAACAATATTCATCAAC+CGG | + | chr2.1:69449533-69449552 | MS.gene002588:CDS | 30.0% | |
CCCAAAAACAAAATCTAAGA+AGG | + | chr2.1:69447297-69447316 | MS.gene002588:intron | 30.0% | |
CTAAGTCAACATTTCAAGAT+GGG | + | chr2.1:69448727-69448746 | MS.gene002588:CDS | 30.0% | |
CTGTGAATAATTACGTGATA+GGG | - | chr2.1:69448845-69448864 | None:intergenic | 30.0% | |
GAAGGAAATAATGAAAGAAG+AGG | + | chr2.1:69446471-69446490 | MS.gene002588:CDS | 30.0% | |
GATGAAAGTAATACTTCATC+TGG | + | chr2.1:69446300-69446319 | MS.gene002588:CDS | 30.0% | |
GGGAAACAAAAACAAAATGA+AGG | - | chr2.1:69448389-69448408 | None:intergenic | 30.0% | |
TCATTTCTCCAGAAATTAGA+GGG | + | chr2.1:69446948-69446967 | MS.gene002588:intron | 30.0% | |
TCTAAGTCAACATTTCAAGA+TGG | + | chr2.1:69448726-69448745 | MS.gene002588:CDS | 30.0% | |
TCTGTGAATAATTACGTGAT+AGG | - | chr2.1:69448846-69448865 | None:intergenic | 30.0% | |
TTATATTGTGTCTCTTGTCT+TGG | - | chr2.1:69448052-69448071 | None:intergenic | 30.0% | |
TTCCATTCAACTTTCTCAAT+AGG | - | chr2.1:69449606-69449625 | None:intergenic | 30.0% | |
! | CTACTATACCATTTTGTTAC+GGG | + | chr2.1:69448137-69448156 | MS.gene002588:intron | 30.0% |
! | GGTCATATTCAAAGATTTTG+TGG | - | chr2.1:69447437-69447456 | None:intergenic | 30.0% |
! | GTAGATACCAGATAAGTTTT+AGG | + | chr2.1:69447325-69447344 | MS.gene002588:intron | 30.0% |
! | TGTTATCAAAATTTTGCGGA+AGG | + | chr2.1:69447198-69447217 | MS.gene002588:intron | 30.0% |
!! | CCAATGTAACTTCTAAAACT+TGG | + | chr2.1:69449574-69449593 | MS.gene002588:CDS | 30.0% |
!!! | CCAAGTTTTAGAAGTTACAT+TGG | - | chr2.1:69449577-69449596 | None:intergenic | 30.0% |
!!! | GTTATGTTGACTTTGGTTTT+AGG | - | chr2.1:69448487-69448506 | None:intergenic | 30.0% |
!!! | TTGTTTTTGGGGAAAGATTT+TGG | - | chr2.1:69447288-69447307 | None:intergenic | 30.0% |
AAACAAGATGAAAGGAATGC+AGG | - | chr2.1:69448906-69448925 | None:intergenic | 35.0% | |
AAGTGAAATCTTGAAGGAGA+AGG | - | chr2.1:69448255-69448274 | None:intergenic | 35.0% | |
AATGTTACCTTGATCCGAAA+TGG | - | chr2.1:69449726-69449745 | None:intergenic | 35.0% | |
ATAATTACGTGATAGGGAGA+AGG | - | chr2.1:69448839-69448858 | None:intergenic | 35.0% | |
ATGTTACCTTGATCCGAAAT+GGG | - | chr2.1:69449725-69449744 | None:intergenic | 35.0% | |
CAACATTTCAAGATGGGTAA+TGG | + | chr2.1:69448733-69448752 | MS.gene002588:CDS | 35.0% | |
CATGAATCACATCTAAGAGA+TGG | + | chr2.1:69448105-69448124 | MS.gene002588:intron | 35.0% | |
CATGTTAACTTATGCCCTAA+GGG | + | chr2.1:69447485-69447504 | MS.gene002588:intron | 35.0% | |
CTCATTTCTCCAGAAATTAG+AGG | + | chr2.1:69446947-69446966 | MS.gene002588:intron | 35.0% | |
CTGTTTCAACAAAGTGATGA+AGG | + | chr2.1:69447360-69447379 | MS.gene002588:intron | 35.0% | |
CTTCATCACTTTGTTGAAAC+AGG | - | chr2.1:69447362-69447381 | None:intergenic | 35.0% | |
GAATGAGAATGAGAATGAGA+AGG | + | chr2.1:69446419-69446438 | MS.gene002588:CDS | 35.0% | |
GAGAGAGATTAATTGCAAGA+AGG | - | chr2.1:69449397-69449416 | None:intergenic | 35.0% | |
GGTAATTGTAGATCAAGAGA+AGG | + | chr2.1:69446453-69446472 | MS.gene002588:CDS | 35.0% | |
GTGATTAAACCTCTTGTTCA+TGG | + | chr2.1:69447672-69447691 | MS.gene002588:intron | 35.0% | |
GTTGGAAAGCTAAAGAGAAA+GGG | - | chr2.1:69448409-69448428 | None:intergenic | 35.0% | |
TAGCTTAGTGCTAATTTCCT+TGG | - | chr2.1:69449957-69449976 | None:intergenic | 35.0% | |
TCATGTTAACTTATGCCCTA+AGG | + | chr2.1:69447484-69447503 | MS.gene002588:intron | 35.0% | |
TCCTGCAAAATTGCAACAAA+AGG | + | chr2.1:69448449-69448468 | MS.gene002588:intron | 35.0% | |
TGAGCAAAGTGAAATCTTGA+AGG | - | chr2.1:69448261-69448280 | None:intergenic | 35.0% | |
TGTGAATACCCGTAACAAAA+TGG | - | chr2.1:69448148-69448167 | None:intergenic | 35.0% | |
TTAAACCTCTTGTTCATGGT+TGG | + | chr2.1:69447676-69447695 | MS.gene002588:intron | 35.0% | |
TTCATCAACCGGAATTCAAA+AGG | + | chr2.1:69449544-69449563 | MS.gene002588:CDS | 35.0% | |
TTCTCTTCAAGAAATTGGGT+TGG | - | chr2.1:69449492-69449511 | None:intergenic | 35.0% | |
TTTCGGATCAAGGTAACATT+AGG | + | chr2.1:69449726-69449745 | MS.gene002588:intron | 35.0% | |
TTTGGCAGAAAGAAAAGAGA+TGG | - | chr2.1:69447270-69447289 | None:intergenic | 35.0% | |
! | AATTTAGGGTTAGCATCACT+AGG | + | chr2.1:69447386-69447405 | MS.gene002588:intron | 35.0% |
! | ACCTTTTGTTGCAATTTTGC+AGG | - | chr2.1:69448453-69448472 | None:intergenic | 35.0% |
! | TTCTTACCTGATTTGCAACT+AGG | + | chr2.1:69449878-69449897 | MS.gene002588:CDS | 35.0% |
!!! | TACATTTTGAAGCCCCATTT+CGG | + | chr2.1:69449709-69449728 | MS.gene002588:CDS | 35.0% |
AAACTTGACGAGTTTGGACA+AGG | + | chr2.1:69447114-69447133 | MS.gene002588:CDS | 40.0% | |
AAACTTGTGGAAGAGTTGCA+AGG | - | chr2.1:69449684-69449703 | None:intergenic | 40.0% | |
AAGACCAACACCTCACATTT+AGG | - | chr2.1:69447998-69448017 | None:intergenic | 40.0% | |
AGCAAGAAACTTGACGAGTT+TGG | + | chr2.1:69447108-69447127 | MS.gene002588:CDS | 40.0% | |
AGGAGAGTTGGATAATACTG+AGG | - | chr2.1:69448802-69448821 | None:intergenic | 40.0% | |
ATGTTAGATCCAAGATGCCT+AGG | + | chr2.1:69446508-69446527 | MS.gene002588:CDS | 40.0% | |
CACACATATGGAACCAATGA+TGG | + | chr2.1:69449908-69449927 | MS.gene002588:CDS | 40.0% | |
CCATGAAGCAACAATACTTG+AGG | + | chr2.1:69446377-69446396 | MS.gene002588:CDS | 40.0% | |
CTAGGTTTGAGTCACACATA+TGG | + | chr2.1:69449896-69449915 | MS.gene002588:CDS | 40.0% | |
CTCAAACCTAGTTGCAAATC+AGG | - | chr2.1:69449887-69449906 | None:intergenic | 40.0% | |
CTTCAGCTAATGAATGTGAG+AGG | + | chr2.1:69446707-69446726 | MS.gene002588:CDS | 40.0% | |
GCGTATTTGTCTGTGAATAG+TGG | + | chr2.1:69449074-69449093 | MS.gene002588:intron | 40.0% | |
GGTTGGAAAGCTAAAGAGAA+AGG | - | chr2.1:69448410-69448429 | None:intergenic | 40.0% | |
TACTTTCATCAACAAGCTGC+AGG | - | chr2.1:69446290-69446309 | None:intergenic | 40.0% | |
TGAAGGTTCATGATGTCATC+CGG | - | chr2.1:69448372-69448391 | None:intergenic | 40.0% | |
TGTTACCTTGATCCGAAATG+GGG | - | chr2.1:69449724-69449743 | None:intergenic | 40.0% | |
TTCCTTAACATGTGCCCTTA+GGG | - | chr2.1:69447502-69447521 | None:intergenic | 40.0% | |
TTTCACTTTGCTCAAGCTCT+CGG | + | chr2.1:69448267-69448286 | MS.gene002588:intron | 40.0% | |
! | ATTAGCTGAAGCACCAACTT+GGG | - | chr2.1:69446698-69446717 | None:intergenic | 40.0% |
! | ATTTGGTTCAACTCTGATGC+AGG | + | chr2.1:69446665-69446684 | MS.gene002588:intron | 40.0% |
! | CATTTCAAGATGGGTAATGG+TGG | + | chr2.1:69448736-69448755 | MS.gene002588:CDS | 40.0% |
! | CCTCAAGTATTGTTGCTTCA+TGG | - | chr2.1:69446380-69446399 | None:intergenic | 40.0% |
! | GATGATTGAAGTGCCAATGT+TGG | - | chr2.1:69449443-69449462 | None:intergenic | 40.0% |
! | GCAAGTAGCCTTTTGAATTC+CGG | - | chr2.1:69449555-69449574 | None:intergenic | 40.0% |
! | TTGCATGCTGTTGATAGACT+TGG | + | chr2.1:69446564-69446583 | MS.gene002588:CDS | 40.0% |
!! | AAGAAATTGGGTTGGTGTCA+CGG | - | chr2.1:69449484-69449503 | None:intergenic | 40.0% |
!!! | GTGGCATATTTTGGTGGATT+TGG | + | chr2.1:69447698-69447717 | MS.gene002588:intron | 40.0% |
!!! | TCATGGTTGGTGGCATATTT+TGG | + | chr2.1:69447689-69447708 | MS.gene002588:intron | 40.0% |
AACCTCTTGTTCATGGTTGG+TGG | + | chr2.1:69447679-69447698 | MS.gene002588:intron | 45.0% | |
CAACGGTACCCTCTAATTTC+TGG | - | chr2.1:69446959-69446978 | None:intergenic | 45.0% | |
CAGAGGTCAACACAAGAAGT+AGG | + | chr2.1:69448685-69448704 | MS.gene002588:CDS | 45.0% | |
CAGTACTATGCCAAACACAG+AGG | + | chr2.1:69448668-69448687 | MS.gene002588:intron | 45.0% | |
GATCCAAGATGCCTAGGTTA+AGG | + | chr2.1:69446514-69446533 | MS.gene002588:CDS | 45.0% | |
GGAAGAGTTGCAAGGTTCTT+TGG | - | chr2.1:69449676-69449695 | None:intergenic | 45.0% | |
GTTCCTTAACATGTGCCCTT+AGG | - | chr2.1:69447633-69447614 | None:intergenic | 45.0% | |
TACGTGATAGGGAGAAGGAA+GGG | - | chr2.1:69448834-69448853 | None:intergenic | 45.0% | |
TCATGTCAAGTCTCACTTGC+AGG | + | chr2.1:69446742-69446761 | MS.gene002588:CDS | 45.0% | |
TCCTTAACATGTGCCCTTGA+GGG | + | chr2.1:69447616-69447635 | MS.gene002588:intron | 45.0% | |
TCTCTCTCTCTCTGATCTCT+AGG | + | chr2.1:69449415-69449434 | MS.gene002588:intron | 45.0% | |
TGAGTGTGTGCCTAAATGTG+AGG | + | chr2.1:69447985-69448004 | MS.gene002588:intron | 45.0% | |
TGATCATTGCAGAGAGACCA+AGG | + | chr2.1:69449937-69449956 | MS.gene002588:CDS | 45.0% | |
TGATCTCTAGGCACCAACAT+TGG | + | chr2.1:69449427-69449446 | MS.gene002588:intron | 45.0% | |
TGTGCCTAAATGTGAGGTGT+TGG | + | chr2.1:69447991-69448010 | MS.gene002588:intron | 45.0% | |
TTACGTGATAGGGAGAAGGA+AGG | - | chr2.1:69448835-69448854 | None:intergenic | 45.0% | |
TTCCTTAACATGTGCCCTTG+AGG | + | chr2.1:69447615-69447634 | MS.gene002588:intron | 45.0% | |
! | AATGCTAACTTGTGCCCTCA+AGG | - | chr2.1:69447633-69447652 | None:intergenic | 45.0% |
! | ATGCTAACTTGTGCCCTCAA+GGG | - | chr2.1:69447632-69447651 | None:intergenic | 45.0% |
! | CATGCTGTTGATAGACTTGG+TGG | + | chr2.1:69446567-69446586 | MS.gene002588:CDS | 45.0% |
! | CATTAGCTGAAGCACCAACT+TGG | - | chr2.1:69446699-69446718 | None:intergenic | 45.0% |
! | CTTGTGTTGACCTCTGTGTT+TGG | - | chr2.1:69448681-69448700 | None:intergenic | 45.0% |
!! | AGAAATTGGGTTGGTGTCAC+GGG | - | chr2.1:69449483-69449502 | None:intergenic | 45.0% |
!!! | TGGTTGGTGGCATATTTTGG+TGG | + | chr2.1:69447692-69447711 | MS.gene002588:intron | 45.0% |
!! | AAAAGAAATAAATTAAAAAA+TGG | + | chr2.1:69447805-69447824 | MS.gene002588:intron | 5.0% |
!! | AAAGAAATAAATTAAAAAAT+GGG | + | chr2.1:69447806-69447825 | MS.gene002588:intron | 5.0% |
AGGTTCATGATGTCATCCGG+AGG | - | chr2.1:69448369-69448388 | None:intergenic | 50.0% | |
CCAAGATGCCTAGGTTAAGG+TGG | + | chr2.1:69446517-69446536 | MS.gene002588:CDS | 50.0% | |
CCACCTTAACCTAGGCATCT+TGG | - | chr2.1:69446520-69446539 | None:intergenic | 50.0% | |
GTCACGGGTGCAAATCTGAA+AGG | - | chr2.1:69449468-69449487 | None:intergenic | 50.0% | |
TCAGGAGTCCACCTTAACCT+AGG | - | chr2.1:69446528-69446547 | None:intergenic | 50.0% | |
TGAAGCCCCATTTCGGATCA+AGG | + | chr2.1:69449716-69449735 | MS.gene002588:CDS | 50.0% | |
TGCCACCAACCATGAACAAG+AGG | - | chr2.1:69447684-69447703 | None:intergenic | 50.0% | |
TTTGCTCAAGCTCTCGGAGA+AGG | + | chr2.1:69448273-69448292 | MS.gene002588:intron | 50.0% | |
! | TGCCCTAAGGGCACATGTTA+AGG | + | chr2.1:69447497-69447516 | MS.gene002588:intron | 50.0% |
GATAGGGAGAAGGAAGGGCA+TGG | - | chr2.1:69448829-69448848 | None:intergenic | 55.0% | |
TGATGTCATCCGGAGGAGAG+TGG | - | chr2.1:69448362-69448381 | None:intergenic | 55.0% | |
TGCAGGAGCAACACCCAAGT+TGG | + | chr2.1:69446682-69446701 | MS.gene002588:intron | 55.0% | |
! | GCCCTCAAGGGCACATGTTA+AGG | - | chr2.1:69447620-69447639 | None:intergenic | 55.0% |
CTTCGTCCACCACTCTCCTC+CGG | + | chr2.1:69448350-69448369 | MS.gene002588:intron | 60.0% | |
TGTCATCCGGAGGAGAGTGG+TGG | - | chr2.1:69448359-69448378 | None:intergenic | 60.0% | |
! | AGAAGGAAGGGCATGGCTGC+AGG | - | chr2.1:69448822-69448841 | None:intergenic | 60.0% |
GGGCATGGCTGCAGGAGAGT+TGG | - | chr2.1:69448814-69448833 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 69446237 | 69449988 | 69446237 | ID=MS.gene002588 |
chr2.1 | mRNA | 69446237 | 69449988 | 69446237 | ID=MS.gene002588.t1;Parent=MS.gene002588 |
chr2.1 | exon | 69446237 | 69446597 | 69446237 | ID=MS.gene002588.t1.exon1;Parent=MS.gene002588.t1 |
chr2.1 | CDS | 69446237 | 69446597 | 69446237 | ID=cds.MS.gene002588.t1;Parent=MS.gene002588.t1 |
chr2.1 | exon | 69446687 | 69446763 | 69446687 | ID=MS.gene002588.t1.exon2;Parent=MS.gene002588.t1 |
chr2.1 | CDS | 69446687 | 69446763 | 69446687 | ID=cds.MS.gene002588.t1;Parent=MS.gene002588.t1 |
chr2.1 | exon | 69447099 | 69447135 | 69447099 | ID=MS.gene002588.t1.exon3;Parent=MS.gene002588.t1 |
chr2.1 | CDS | 69447099 | 69447135 | 69447099 | ID=cds.MS.gene002588.t1;Parent=MS.gene002588.t1 |
chr2.1 | exon | 69448671 | 69448893 | 69448671 | ID=MS.gene002588.t1.exon4;Parent=MS.gene002588.t1 |
chr2.1 | CDS | 69448671 | 69448893 | 69448671 | ID=cds.MS.gene002588.t1;Parent=MS.gene002588.t1 |
chr2.1 | exon | 69449437 | 69449737 | 69449437 | ID=MS.gene002588.t1.exon5;Parent=MS.gene002588.t1 |
chr2.1 | CDS | 69449437 | 69449737 | 69449437 | ID=cds.MS.gene002588.t1;Parent=MS.gene002588.t1 |
chr2.1 | exon | 69449842 | 69449988 | 69449842 | ID=MS.gene002588.t1.exon6;Parent=MS.gene002588.t1 |
chr2.1 | CDS | 69449842 | 69449988 | 69449842 | ID=cds.MS.gene002588.t1;Parent=MS.gene002588.t1 |
Gene Sequence |
Protein sequence |