Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002723.t1 | XP_003593904.2 | 80.5 | 133 | 23 | 2 | 1 | 130 | 1 | 133 | 6.20E-47 | 196.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002723.t1 | Q8LBM2 | 44.3 | 131 | 67 | 4 | 1 | 130 | 3 | 128 | 3.3e-17 | 89.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002723.t1 | G7IP70 | 80.5 | 133 | 23 | 2 | 1 | 130 | 1 | 133 | 4.4e-47 | 196.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene002723.t1 | TF | Tify |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002723.t1 | MTR_2g019190 | 92.537 | 134 | 5 | 3 | 1 | 130 | 1 | 133 | 7.41e-82 | 236 |
MS.gene002723.t1 | MTR_8g107300 | 72.180 | 133 | 16 | 6 | 1 | 129 | 1 | 116 | 6.99e-55 | 167 |
MS.gene002723.t1 | MTR_8g107300 | 78.261 | 92 | 9 | 2 | 38 | 129 | 1 | 81 | 2.63e-43 | 137 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002723.t1 | AT1G30135 | 44.275 | 131 | 67 | 4 | 1 | 130 | 3 | 128 | 7.68e-27 | 97.4 |
MS.gene002723.t1 | AT2G34600 | 41.481 | 135 | 67 | 7 | 1 | 131 | 20 | 146 | 2.55e-17 | 73.6 |
Find 26 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCTTACATGGGGTGATTT+TGG | 0.252416 | 2.1:-67833937 | None:intergenic |
TGCACTATTGTTGGTGTTGA+TGG | 0.316876 | 2.1:-67836646 | None:intergenic |
GATGATATGGAGATGCTTCT+TGG | 0.331037 | 2.1:-67836756 | None:intergenic |
TACTGATGTCACAGAGCTTC+AGG | 0.335972 | 2.1:+67834157 | MS.gene002723:CDS |
TGCCAGCATTAAGATGGATT+TGG | 0.344981 | 2.1:-67836575 | None:intergenic |
AATTGTTGTATGGAGGAAAA+AGG | 0.349461 | 2.1:-67833904 | None:intergenic |
CATCTTGCCATCGTAGAAAA+TGG | 0.392349 | 2.1:-67834129 | None:intergenic |
GTTGATGGTTCTGACCCTAT+TGG | 0.411337 | 2.1:-67836631 | None:intergenic |
TCTATTTGCCAGCATTAAGA+TGG | 0.436860 | 2.1:-67836581 | None:intergenic |
TTCATGGAAAGACCTGGTCC+AGG | 0.470860 | 2.1:-67836691 | None:intergenic |
TCTACAAAAGAGAAAGAATA+GGG | 0.475189 | 2.1:+67836732 | MS.gene002723:CDS |
TTCTACAAAAGAGAAAGAAT+AGG | 0.501770 | 2.1:+67836731 | MS.gene002723:CDS |
TGAGGAGATTGCACTATTGT+TGG | 0.504260 | 2.1:-67836655 | None:intergenic |
TGATTGCTAGAATTGTTGTA+TGG | 0.511394 | 2.1:-67833914 | None:intergenic |
GGCCAAATCCATCTTAATGC+TGG | 0.519970 | 2.1:+67836573 | MS.gene002723:intron |
CCATGAAAAGATCTTTGCAA+AGG | 0.529406 | 2.1:+67836707 | MS.gene002723:CDS |
CCTCATCAATTATATAGCCC+TGG | 0.530434 | 2.1:+67836673 | MS.gene002723:CDS |
TCAATAAAGGGTAGAAGAAG+AGG | 0.532802 | 2.1:+67834061 | MS.gene002723:intron |
GATGAGGAGGAATTGCAACT+TGG | 0.553645 | 2.1:+67833874 | None:intergenic |
AAAATACAGAAAAGATGAGG+AGG | 0.570322 | 2.1:+67833861 | None:intergenic |
CAATTATATAGCCCTGGACC+AGG | 0.570726 | 2.1:+67836679 | MS.gene002723:CDS |
AATGCTGGCAAATAGAATGA+AGG | 0.571363 | 2.1:+67836588 | MS.gene002723:CDS |
TCATGGAAAGACCTGGTCCA+GGG | 0.597585 | 2.1:-67836690 | None:intergenic |
TTGCTAGAATTGTTGTATGG+AGG | 0.628547 | 2.1:-67833911 | None:intergenic |
CCAGGGCTATATAATTGATG+AGG | 0.642818 | 2.1:-67836673 | None:intergenic |
CCATCGTAGAAAATGGTCAG+TGG | 0.671131 | 2.1:-67834122 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTATAAAATAGTATAAATT+TGG | - | chr2.1:67835942-67835961 | None:intergenic | 10.0% |
!! | TAAATTTATATCAAGTATTT+AGG | - | chr2.1:67835520-67835539 | None:intergenic | 10.0% |
!!! | ATAAATAAATATAGATTTTG+AGG | + | chr2.1:67835558-67835577 | MS.gene002723:intron | 10.0% |
!!! | TATTTTGAAATAATTTGAAA+TGG | - | chr2.1:67835042-67835061 | None:intergenic | 10.0% |
!!! | TTATTTTAACATTGATTTAA+CGG | + | chr2.1:67834813-67834832 | MS.gene002723:intron | 10.0% |
!! | AAAAAATTAACAAATTCATC+CGG | - | chr2.1:67835875-67835894 | None:intergenic | 15.0% |
!! | AAAAATACAAATTCATATCA+AGG | - | chr2.1:67835849-67835868 | None:intergenic | 15.0% |
!! | AAAATACAAATTCATATCAA+GGG | - | chr2.1:67835848-67835867 | None:intergenic | 15.0% |
!! | AAACCTTAAAAAGAAAATTA+AGG | + | chr2.1:67836113-67836132 | MS.gene002723:intron | 15.0% |
!! | ATTTAGTGTTATATTGTATT+GGG | - | chr2.1:67834406-67834425 | None:intergenic | 15.0% |
!! | TATTTAGTGTTATATTGTAT+TGG | - | chr2.1:67834407-67834426 | None:intergenic | 15.0% |
!!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr2.1:67834471-67834490 | None:intergenic | 15.0% |
!!! | ATATAAATTTAGTTTTCATG+AGG | + | chr2.1:67835529-67835548 | MS.gene002723:intron | 15.0% |
!!! | ATGAATTTGTATTTTTTTAC+CGG | + | chr2.1:67835853-67835872 | MS.gene002723:intron | 15.0% |
!!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr2.1:67834472-67834491 | None:intergenic | 15.0% |
!!! | TATCCTTAATTTTCTTTTTA+AGG | - | chr2.1:67836119-67836138 | None:intergenic | 15.0% |
!!! | TCATTTTTGTTAAAAAAGTT+TGG | + | chr2.1:67836265-67836284 | MS.gene002723:intron | 15.0% |
!!! | TTGTTAATTTGTTCAATAAA+GGG | + | chr2.1:67834049-67834068 | MS.gene002723:intron | 15.0% |
!!! | TTTGTTAATTTGTTCAATAA+AGG | + | chr2.1:67834048-67834067 | MS.gene002723:intron | 15.0% |
!! | AAAGTGGAATATATTGTATT+GGG | - | chr2.1:67834447-67834466 | None:intergenic | 20.0% |
!! | AAATGGATATTATTGTTGAA+AGG | - | chr2.1:67835025-67835044 | None:intergenic | 20.0% |
!! | AATTAACTGCTAGAAATATT+AGG | - | chr2.1:67836003-67836022 | None:intergenic | 20.0% |
!! | CTATAAAGTTTGAAAATTCT+TGG | - | chr2.1:67836379-67836398 | None:intergenic | 20.0% |
!!! | AAAACAAATTTTGCTTACAT+GGG | - | chr2.1:67833950-67833969 | None:intergenic | 20.0% |
!!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr2.1:67834470-67834489 | None:intergenic | 20.0% |
!!! | CATAAAAAGTCACAATTTTA+AGG | - | chr2.1:67834884-67834903 | None:intergenic | 20.0% |
!!! | TAATTGTTTTGGTTTTAGTT+TGG | + | chr2.1:67834646-67834665 | MS.gene002723:intron | 20.0% |
!!! | TGCGGAAAATAATTTTTAAA+AGG | + | chr2.1:67835636-67835655 | MS.gene002723:intron | 20.0% |
!!! | TTTTGATGGTTAGTTTAAAT+TGG | - | chr2.1:67835456-67835475 | None:intergenic | 20.0% |
! | ACCAAAACAATTAATTAAGC+TGG | - | chr2.1:67834639-67834658 | None:intergenic | 25.0% |
! | ACTCATAATATATAGGCAAA+AGG | - | chr2.1:67835128-67835147 | None:intergenic | 25.0% |
! | ATCATATCATCTTCAATCAT+AGG | - | chr2.1:67834236-67834255 | None:intergenic | 25.0% |
! | ATTGTTGAAAGGTTAAATCA+AGG | - | chr2.1:67835014-67835033 | None:intergenic | 25.0% |
! | CAGTATAAGGTCAATTATTT+CGG | + | chr2.1:67836461-67836480 | MS.gene002723:intron | 25.0% |
! | CCAAAACAATTAATTAAGCT+GGG | - | chr2.1:67834638-67834657 | None:intergenic | 25.0% |
! | CTATGAGACTCATAATATAT+AGG | - | chr2.1:67835135-67835154 | None:intergenic | 25.0% |
! | CTGGTTATCATATTCAATTA+TGG | + | chr2.1:67834594-67834613 | MS.gene002723:intron | 25.0% |
! | GAAAGTGGAATATATTGTAT+TGG | - | chr2.1:67834448-67834467 | None:intergenic | 25.0% |
! | TCAATTATTTCGGATAAGAA+AGG | + | chr2.1:67836471-67836490 | MS.gene002723:intron | 25.0% |
! | TCTACAAAAGAGAAAGAATA+GGG | + | chr2.1:67836732-67836751 | MS.gene002723:CDS | 25.0% |
! | TTCAATTATGGATCATAAGA+AGG | + | chr2.1:67834606-67834625 | MS.gene002723:intron | 25.0% |
! | TTCTACAAAAGAGAAAGAAT+AGG | + | chr2.1:67836731-67836750 | MS.gene002723:CDS | 25.0% |
! | TTGTTGAAAGGTTAAATCAA+GGG | - | chr2.1:67835013-67835032 | None:intergenic | 25.0% |
!! | AAACAAATTTTGCTTACATG+GGG | - | chr2.1:67833949-67833968 | None:intergenic | 25.0% |
!! | AAAGTGATAATGTTTGCATT+TGG | - | chr2.1:67834712-67834731 | None:intergenic | 25.0% |
!! | GAAAACAAATTTTGCTTACA+TGG | - | chr2.1:67833951-67833970 | None:intergenic | 25.0% |
!! | TTGAAATGAGTCAGTTATTT+TGG | - | chr2.1:67834360-67834379 | None:intergenic | 25.0% |
!! | TTTTGTAAAAGCAAGCTAAT+TGG | + | chr2.1:67836346-67836365 | MS.gene002723:intron | 25.0% |
!!! | AAATTTGGTGTGAATTTCAA+TGG | - | chr2.1:67835927-67835946 | None:intergenic | 25.0% |
!!! | ACTGGTCTTATTTAGAAATT+TGG | - | chr2.1:67835302-67835321 | None:intergenic | 25.0% |
!!! | AGGAGTAAATGACTTTTTTT+TGG | - | chr2.1:67835108-67835127 | None:intergenic | 25.0% |
!!! | AGTAAATGACTTTTTTTTGG+TGG | - | chr2.1:67835105-67835124 | None:intergenic | 25.0% |
!!! | ATGTGATTGTTGTTTTCTTT+GGG | + | chr2.1:67834010-67834029 | MS.gene002723:intron | 25.0% |
!!! | CATTGATTTAACGGATTTTT+CGG | + | chr2.1:67834822-67834841 | MS.gene002723:intron | 25.0% |
!!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr2.1:67834338-67834357 | None:intergenic | 25.0% |
!!! | TATGTGATTGTTGTTTTCTT+TGG | + | chr2.1:67834009-67834028 | MS.gene002723:intron | 25.0% |
!!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr2.1:67834359-67834378 | None:intergenic | 25.0% |
!!! | TTAGTTTAAATTGGTTTGAG+AGG | - | chr2.1:67835447-67835466 | None:intergenic | 25.0% |
AAATACACATATTGAGAGAG+AGG | + | chr2.1:67835231-67835250 | MS.gene002723:intron | 30.0% | |
AATTGTTGTATGGAGGAAAA+AGG | - | chr2.1:67833907-67833926 | None:intergenic | 30.0% | |
ACACAAACAACGTCATATTT+AGG | + | chr2.1:67835334-67835353 | MS.gene002723:intron | 30.0% | |
AGAAAATGGATCAGTTATTC+CGG | - | chr2.1:67834324-67834343 | None:intergenic | 30.0% | |
CTAAAGTAGGTCAATTATAC+CGG | + | chr2.1:67834506-67834525 | MS.gene002723:intron | 30.0% | |
CTTGTTAATCAGATTATCTG+CGG | + | chr2.1:67835618-67835637 | MS.gene002723:intron | 30.0% | |
TAAAGTAGGTCAATTATACC+GGG | + | chr2.1:67834507-67834526 | MS.gene002723:intron | 30.0% | |
TACCCATTGAACTATATTCA+CGG | + | chr2.1:67835775-67835794 | MS.gene002723:intron | 30.0% | |
TCTGTGTGAAAAACTAAAGT+AGG | + | chr2.1:67834493-67834512 | MS.gene002723:intron | 30.0% | |
TGAATATAGTTCAATGGGTA+GGG | - | chr2.1:67835775-67835794 | None:intergenic | 30.0% | |
TGATTGCTAGAATTGTTGTA+TGG | - | chr2.1:67833917-67833936 | None:intergenic | 30.0% | |
TGTATAAATAAAGGGGAAAG+TGG | - | chr2.1:67834463-67834482 | None:intergenic | 30.0% | |
TTCATGTGTTATGCAGTATA+AGG | + | chr2.1:67836448-67836467 | MS.gene002723:intron | 30.0% | |
! | CCCAGCTTAATTAATTGTTT+TGG | + | chr2.1:67834635-67834654 | MS.gene002723:intron | 30.0% |
!! | ATGTTAGCATTTGATTTGAG+TGG | + | chr2.1:67834210-67834229 | MS.gene002723:intron | 30.0% |
!! | TGACGTTGTTTGTGTTATTT+CGG | - | chr2.1:67835329-67835348 | None:intergenic | 30.0% |
!! | TTTGACTTTGATTTTGGTGT+TGG | - | chr2.1:67835485-67835504 | None:intergenic | 30.0% |
!!! | ATGACTTTTTTTTGGTGGAA+AGG | - | chr2.1:67835100-67835119 | None:intergenic | 30.0% |
!!! | TTTAACGGATTTTTCGGAAA+TGG | + | chr2.1:67834828-67834847 | MS.gene002723:intron | 30.0% |
!!! | TTTGATTTTGGTGTTGGTTT+TGG | - | chr2.1:67835479-67835498 | None:intergenic | 30.0% |
AAAAAGTGACGACACCAATA+GGG | + | chr2.1:67836617-67836636 | MS.gene002723:CDS | 35.0% | |
AATGCTGGCAAATAGAATGA+AGG | + | chr2.1:67836588-67836607 | MS.gene002723:CDS | 35.0% | |
ACAGAATGAGTAACTCAAAC+TGG | + | chr2.1:67834575-67834594 | MS.gene002723:intron | 35.0% | |
ATCAAGTATTTAGGCTGTTG+TGG | - | chr2.1:67835511-67835530 | None:intergenic | 35.0% | |
CAAACAACGTCATATTTAGG+CGG | + | chr2.1:67835337-67835356 | MS.gene002723:intron | 35.0% | |
CCATGAAAAGATCTTTGCAA+AGG | + | chr2.1:67836707-67836726 | MS.gene002723:CDS | 35.0% | |
CTCCGTGAATATAGTTCAAT+GGG | - | chr2.1:67835780-67835799 | None:intergenic | 35.0% | |
GAAAATGGATCAGTTATTCC+GGG | - | chr2.1:67834323-67834342 | None:intergenic | 35.0% | |
GTGAATATAGTTCAATGGGT+AGG | - | chr2.1:67835776-67835795 | None:intergenic | 35.0% | |
TCAAGTATTTAGGCTGTTGT+GGG | - | chr2.1:67835510-67835529 | None:intergenic | 35.0% | |
TCAATAAAGGGTAGAAGAAG+AGG | + | chr2.1:67834061-67834080 | MS.gene002723:intron | 35.0% | |
TCTATTTGCCAGCATTAAGA+TGG | - | chr2.1:67836584-67836603 | None:intergenic | 35.0% | |
TCTCCGTGAATATAGTTCAA+TGG | - | chr2.1:67835781-67835800 | None:intergenic | 35.0% | |
TTAAAAAAGTTTGGCGTGAG+TGG | + | chr2.1:67836274-67836293 | MS.gene002723:intron | 35.0% | |
TTGCTAGAATTGTTGTATGG+AGG | - | chr2.1:67833914-67833933 | None:intergenic | 35.0% | |
! | AGTTTGAGTTACTCATTCTG+TGG | - | chr2.1:67834576-67834595 | None:intergenic | 35.0% |
! | CCTTTGCAAAGATCTTTTCA+TGG | - | chr2.1:67836710-67836729 | None:intergenic | 35.0% |
!! | TTGTGTTATTTCGGTCTAAC+TGG | - | chr2.1:67835320-67835339 | None:intergenic | 35.0% |
AAGTATTTAGGCTGTTGTGG+GGG | - | chr2.1:67835508-67835527 | None:intergenic | 40.0% | |
ACCACTTACTATCTCTTTCG+TGG | - | chr2.1:67836146-67836165 | None:intergenic | 40.0% | |
AGGTTTCACTACCAACTTGT+CGG | - | chr2.1:67836099-67836118 | None:intergenic | 40.0% | |
AGTAAGTGGTAGGTTCCTAT+AGG | + | chr2.1:67836156-67836175 | MS.gene002723:intron | 40.0% | |
CAAGAGTCGAGTTTGAATCT+CGG | - | chr2.1:67835739-67835758 | None:intergenic | 40.0% | |
CAAGTATTTAGGCTGTTGTG+GGG | - | chr2.1:67835509-67835528 | None:intergenic | 40.0% | |
CATCTTGCCATCGTAGAAAA+TGG | - | chr2.1:67834132-67834151 | None:intergenic | 40.0% | |
CCAGGGCTATATAATTGATG+AGG | - | chr2.1:67836676-67836695 | None:intergenic | 40.0% | |
CCTCATCAATTATATAGCCC+TGG | + | chr2.1:67836673-67836692 | MS.gene002723:CDS | 40.0% | |
CGAAAGAGATAGTAAGTGGT+AGG | + | chr2.1:67836146-67836165 | MS.gene002723:intron | 40.0% | |
CTTAGCTTAAGTGCTATGCA+CGG | - | chr2.1:67836038-67836057 | None:intergenic | 40.0% | |
GAAAAAGTGACGACACCAAT+AGG | + | chr2.1:67836616-67836635 | MS.gene002723:CDS | 40.0% | |
GAACTATATTCACGGAGAGT+CGG | + | chr2.1:67835783-67835802 | MS.gene002723:intron | 40.0% | |
GATGATATGGAGATGCTTCT+TGG | - | chr2.1:67836759-67836778 | None:intergenic | 40.0% | |
GTCGCATACATGTCTTATCA+TGG | - | chr2.1:67834262-67834281 | None:intergenic | 40.0% | |
TCCACGAAAGAGATAGTAAG+TGG | + | chr2.1:67836142-67836161 | MS.gene002723:intron | 40.0% | |
TCGAGTTTGAATCTCGGATT+CGG | - | chr2.1:67835733-67835752 | None:intergenic | 40.0% | |
TGAGGAGATTGCACTATTGT+TGG | - | chr2.1:67836658-67836677 | None:intergenic | 40.0% | |
TGAGTTACTCATTCTGTGGT+AGG | - | chr2.1:67834572-67834591 | None:intergenic | 40.0% | |
! | GATCTTTTCATGGAAAGACC+TGG | - | chr2.1:67836700-67836719 | None:intergenic | 40.0% |
! | TGCCAGCATTAAGATGGATT+TGG | - | chr2.1:67836578-67836597 | None:intergenic | 40.0% |
! | TTGCTTACATGGGGTGATTT+TGG | - | chr2.1:67833940-67833959 | None:intergenic | 40.0% |
!! | TAAGGTCTTAAAGAGTGCTC+CGG | - | chr2.1:67834866-67834885 | None:intergenic | 40.0% |
!! | TGCACTATTGTTGGTGTTGA+TGG | - | chr2.1:67836649-67836668 | None:intergenic | 40.0% |
!! | TGGGGGTTTGACTTTGATTT+TGG | - | chr2.1:67835491-67835510 | None:intergenic | 40.0% |
!!! | GGTGTTGGTTTTGGTTTTGA+TGG | - | chr2.1:67835470-67835489 | None:intergenic | 40.0% |
AAGTGGTAGGTTCCTATAGG+TGG | + | chr2.1:67836159-67836178 | MS.gene002723:intron | 45.0% | |
AATAGTCGTTGCCGACAAGT+TGG | + | chr2.1:67836085-67836104 | MS.gene002723:intron | 45.0% | |
ACAACAACGCCACTCAAATG+AGG | + | chr2.1:67835417-67835436 | MS.gene002723:intron | 45.0% | |
ACTATATACTACCTCCGTCC+CGG | - | chr2.1:67834528-67834547 | None:intergenic | 45.0% | |
AGAGGTAGTCCTCATTTGAG+TGG | - | chr2.1:67835429-67835448 | None:intergenic | 45.0% | |
ATGGATCAGTTATTCCGGGA+CGG | - | chr2.1:67834319-67834338 | None:intergenic | 45.0% | |
CAATTATATAGCCCTGGACC+AGG | + | chr2.1:67836679-67836698 | MS.gene002723:CDS | 45.0% | |
CATGCTCATACACCACCTAT+AGG | - | chr2.1:67836174-67836193 | None:intergenic | 45.0% | |
CATTTGAGTGGCGTTGTTGT+TGG | - | chr2.1:67835417-67835436 | None:intergenic | 45.0% | |
CCATCGTAGAAAATGGTCAG+TGG | - | chr2.1:67834125-67834144 | None:intergenic | 45.0% | |
CGGATTCGGATTCACTTAAG+TGG | - | chr2.1:67835719-67835738 | None:intergenic | 45.0% | |
GGCCAAATCCATCTTAATGC+TGG | + | chr2.1:67836573-67836592 | MS.gene002723:intron | 45.0% | |
GTAGGTCAATTATACCGGGA+CGG | + | chr2.1:67834511-67834530 | MS.gene002723:intron | 45.0% | |
TACTGATGTCACAGAGCTTC+AGG | + | chr2.1:67834157-67834176 | MS.gene002723:CDS | 45.0% | |
TGTTAACGTGAATGTCGTGC+AGG | + | chr2.1:67836552-67836571 | MS.gene002723:intron | 45.0% | |
! | CCACTGACCATTTTCTACGA+TGG | + | chr2.1:67834122-67834141 | MS.gene002723:CDS | 45.0% |
!! | AAGGTCTTAAAGAGTGCTCC+GGG | - | chr2.1:67834865-67834884 | None:intergenic | 45.0% |
!! | AGGGTCTTGTTAACGAGTTC+CGG | - | chr2.1:67834994-67835013 | None:intergenic | 45.0% |
!! | GAGATTCCTTAAGAGTGCTC+CGG | + | chr2.1:67834972-67834991 | MS.gene002723:intron | 45.0% |
!! | GTTGATGGTTCTGACCCTAT+TGG | - | chr2.1:67836634-67836653 | None:intergenic | 45.0% |
!! | TGGCGTTGTTGTTGGTTTGT+TGG | - | chr2.1:67835409-67835428 | None:intergenic | 45.0% |
!!! | GGCTGTTGCTGATTTTGCAT+TGG | - | chr2.1:67834104-67834123 | None:intergenic | 45.0% |
!! | AAATTAAATTTAAAAATGAA+AGG | - | chr2.1:67833987-67834006 | None:intergenic | 5.0% |
AGTTATTACTCCCTCCGTCC+CGG | + | chr2.1:67834302-67834321 | MS.gene002723:intron | 50.0% | |
ATCAGTTATTCCGGGACGGA+GGG | - | chr2.1:67834315-67834334 | None:intergenic | 50.0% | |
TCATGGAAAGACCTGGTCCA+GGG | - | chr2.1:67836693-67836712 | None:intergenic | 50.0% | |
TTCATGGAAAGACCTGGTCC+AGG | - | chr2.1:67836694-67836713 | None:intergenic | 50.0% | |
!! | AGGTCTTAAAGAGTGCTCCG+GGG | - | chr2.1:67834864-67834883 | None:intergenic | 50.0% |
GATCAGTTATTCCGGGACGG+AGG | - | chr2.1:67834316-67834335 | None:intergenic | 55.0% | |
GGTCAATTATACCGGGACGG+AGG | + | chr2.1:67834514-67834533 | MS.gene002723:intron | 55.0% | |
! | CGAGTTCCGGAGCACTCTTA+AGG | - | chr2.1:67834981-67835000 | None:intergenic | 55.0% |
! | GAAATGGTAACGAGTGCCCC+CGG | + | chr2.1:67834844-67834863 | MS.gene002723:intron | 55.0% |
!! | GGTCTTAAAGAGTGCTCCGG+GGG | - | chr2.1:67834863-67834882 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 67833875 | 67836783 | 67833875 | ID=MS.gene002723 |
chr2.1 | mRNA | 67833875 | 67836783 | 67833875 | ID=MS.gene002723.t1;Parent=MS.gene002723 |
chr2.1 | exon | 67833875 | 67833951 | 67833875 | ID=MS.gene002723.t1.exon1;Parent=MS.gene002723.t1 |
chr2.1 | CDS | 67833875 | 67833951 | 67833875 | ID=cds.MS.gene002723.t1;Parent=MS.gene002723.t1 |
chr2.1 | exon | 67834070 | 67834178 | 67834070 | ID=MS.gene002723.t1.exon2;Parent=MS.gene002723.t1 |
chr2.1 | CDS | 67834070 | 67834178 | 67834070 | ID=cds.MS.gene002723.t1;Parent=MS.gene002723.t1 |
chr2.1 | exon | 67836574 | 67836783 | 67836574 | ID=MS.gene002723.t1.exon3;Parent=MS.gene002723.t1 |
chr2.1 | CDS | 67836574 | 67836783 | 67836574 | ID=cds.MS.gene002723.t1;Parent=MS.gene002723.t1 |
Gene Sequence |
Protein sequence |