AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene002965

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002965.t1 MTR_2g023580 91.189 227 19 1 12 238 13 238 2.48e-154 428
MS.gene002965.t1 MTR_7g069660 82.609 69 12 0 42 110 59 127 8.39e-35 127
MS.gene002965.t1 MTR_1g112370 79.412 68 14 0 45 112 13 80 5.24e-34 125
MS.gene002965.t1 MTR_2g084230 66.265 83 28 0 42 124 85 167 3.03e-33 122
MS.gene002965.t1 MTR_0223s0040 78.788 66 14 0 45 110 9 74 3.62e-33 121
MS.gene002965.t1 MTR_2g084230 66.265 83 28 0 42 124 85 167 5.57e-33 123
MS.gene002965.t1 MTR_8g086410 80.000 65 13 0 46 110 101 165 5.20e-32 121
MS.gene002965.t1 MTR_8g086410 80.000 65 13 0 46 110 103 167 5.45e-32 121
MS.gene002965.t1 MTR_8g086410 72.222 72 13 1 46 110 103 174 2.02e-29 114
MS.gene002965.t1 MTR_2g016220 72.464 69 19 0 46 114 81 149 2.77e-29 113
MS.gene002965.t1 MTR_2g016220 72.464 69 19 0 46 114 81 149 3.24e-29 113
MS.gene002965.t1 MTR_2g016220 68.493 73 19 1 46 114 81 153 3.98e-27 107
MS.gene002965.t1 MTR_3g450310 55.714 70 31 0 46 115 11 80 4.35e-23 93.2
MS.gene002965.t1 MTR_1g021520 65.672 67 22 1 45 110 116 182 1.15e-21 91.3
MS.gene002965.t1 MTR_7g098250 43.243 111 57 2 28 132 231 341 4.31e-21 91.7
MS.gene002965.t1 MTR_6g071625 57.143 70 30 0 53 122 201 270 7.94e-21 90.1
MS.gene002965.t1 MTR_8g066310 67.241 58 19 0 53 110 172 229 1.29e-20 89.4
MS.gene002965.t1 MTR_7g115530 57.971 69 27 1 55 121 219 287 2.21e-20 87.8
MS.gene002965.t1 MTR_5g029470 58.333 72 29 1 48 118 212 283 2.87e-20 89.0
MS.gene002965.t1 MTR_1g080330 64.286 56 20 0 55 110 176 231 5.83e-20 86.7
MS.gene002965.t1 MTR_7g115530 57.971 69 27 1 55 121 219 287 5.87e-20 87.0
MS.gene002965.t1 MTR_1g080330 64.286 56 20 0 55 110 176 231 6.78e-20 87.8
MS.gene002965.t1 MTR_3g064840 64.062 64 22 1 48 110 267 330 8.06e-20 87.8
MS.gene002965.t1 MTR_7g115530 57.971 69 27 1 55 121 219 287 8.12e-20 87.8
MS.gene002965.t1 MTR_7g115530 64.286 56 20 0 55 110 219 274 1.91e-19 86.3
MS.gene002965.t1 MTR_7g115530 65.385 52 18 0 55 106 219 270 2.99e-18 82.0
MS.gene002965.t1 MTR_7g115530 68.000 50 16 0 55 104 219 268 4.18e-18 81.3
MS.gene002965.t1 MTR_7g088070 46.154 104 53 2 46 149 42 142 4.50e-18 81.3
MS.gene002965.t1 MTR_6g032990 64.151 53 19 0 55 107 43 95 5.29e-18 82.4
MS.gene002965.t1 MTR_7g093030 60.656 61 24 0 50 110 208 268 5.81e-18 81.3
MS.gene002965.t1 MTR_7g093030 60.656 61 24 0 50 110 208 268 1.17e-17 81.3
MS.gene002965.t1 MTR_5g027440 62.069 58 22 0 50 107 21 78 1.18e-17 80.1
MS.gene002965.t1 MTR_1g090670 63.158 57 21 0 55 111 45 101 1.39e-17 80.1
MS.gene002965.t1 MTR_2g027800 63.158 57 21 0 55 111 40 96 1.97e-17 80.1
MS.gene002965.t1 MTR_7g088070 45.283 106 55 2 46 149 42 146 2.07e-17 79.3
MS.gene002965.t1 MTR_2g086450 62.264 53 20 0 55 107 46 98 3.66e-17 80.1
MS.gene002965.t1 MTR_5g041350 53.333 60 28 0 55 114 16 75 5.83e-17 79.0
MS.gene002965.t1 MTR_2g027800 64.151 53 19 0 55 107 40 92 7.83e-17 78.2
MS.gene002965.t1 MTR_1g053830 50.746 67 33 0 44 110 8 74 9.38e-17 73.6
MS.gene002965.t1 MTR_1g053835 59.091 66 25 1 56 121 260 323 1.10e-16 79.0
MS.gene002965.t1 MTR_2g027860 65.455 55 19 0 56 110 51 105 2.66e-16 77.0
MS.gene002965.t1 MTR_6g444980 45.556 90 42 2 55 138 36 124 3.08e-16 77.4
MS.gene002965.t1 MTR_6g444980 45.556 90 42 2 55 138 36 124 3.41e-16 77.0
MS.gene002965.t1 MTR_4g081710 50.000 64 31 1 55 118 18 80 2.67e-15 74.3
MS.gene002965.t1 MTR_4g086835 50.000 68 34 0 40 107 260 327 1.67e-14 72.4
MS.gene002965.t1 MTR_1g053800 58.491 53 22 0 56 108 179 231 6.89e-14 70.1
MS.gene002965.t1 MTR_7g068600 61.818 55 18 1 56 107 15 69 2.32e-13 67.8
MS.gene002965.t1 MTR_4g086835 50.000 68 33 1 40 107 260 326 4.06e-13 68.2
MS.gene002965.t1 MTR_4g113140 57.692 52 22 0 56 107 237 288 9.80e-13 67.4
MS.gene002965.t1 MTR_2g450070 54.545 55 24 1 53 107 212 265 1.90e-12 66.6
MS.gene002965.t1 MTR_2g450070 54.545 55 24 1 53 107 212 265 1.92e-12 66.6
MS.gene002965.t1 MTR_7g093010 35.556 135 64 4 14 132 171 298 2.91e-12 65.5
MS.gene002965.t1 MTR_4g064730 47.126 87 42 4 22 107 100 183 1.07e-11 63.9
MS.gene002965.t1 MTR_1g093080 51.923 52 25 0 56 107 213 264 5.90e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002965.t1 AT2G38300 56.667 120 48 2 30 145 30 149 1.01e-34 127
MS.gene002965.t1 AT4G04605 53.636 110 46 2 41 149 1 106 5.40e-34 122
MS.gene002965.t1 AT2G02060 83.871 62 10 0 46 107 21 82 9.08e-33 120
MS.gene002965.t1 AT2G02060 83.871 62 10 0 46 107 21 82 9.08e-33 120
MS.gene002965.t1 AT2G42660 46.809 141 70 2 46 185 42 178 3.07e-31 115
MS.gene002965.t1 AT2G40260 63.529 85 31 0 33 117 61 145 4.31e-31 118
MS.gene002965.t1 AT1G14600 79.032 62 13 0 46 107 15 76 1.73e-29 111
MS.gene002965.t1 AT4G04555 57.534 73 31 0 41 113 1 73 3.67e-25 95.9
MS.gene002965.t1 AT4G04580 48.864 88 42 1 41 128 1 85 4.53e-24 94.7
MS.gene002965.t1 AT4G17695 50.526 95 40 1 16 110 133 220 6.29e-23 95.1
MS.gene002965.t1 AT5G42630 68.966 58 18 0 53 110 104 161 5.52e-22 90.9
MS.gene002965.t1 AT5G42630 68.966 58 18 0 53 110 104 161 5.96e-22 91.7
MS.gene002965.t1 AT1G32240 58.333 72 29 1 48 118 206 277 3.81e-20 88.6
MS.gene002965.t1 AT1G32240 64.062 64 22 1 48 110 206 269 3.98e-20 88.2
MS.gene002965.t1 AT5G16560 64.062 64 22 1 48 110 212 275 5.40e-20 88.2
MS.gene002965.t1 AT4G28610 65.455 55 19 0 56 110 227 281 9.93e-19 84.7
MS.gene002965.t1 AT5G29000 65.455 55 19 0 56 110 190 244 1.07e-18 84.3
MS.gene002965.t1 AT5G29000 65.455 55 19 0 56 110 190 244 1.07e-18 84.3
MS.gene002965.t1 AT5G29000 65.455 55 19 0 56 110 233 287 1.09e-18 83.6
MS.gene002965.t1 AT5G29000 65.455 55 19 0 56 110 233 287 1.37e-18 84.3
MS.gene002965.t1 AT3G04450 61.818 55 21 0 56 110 240 294 2.11e-18 82.8
MS.gene002965.t1 AT3G04450 42.105 95 54 1 56 149 200 294 2.13e-18 83.6
MS.gene002965.t1 AT3G04450 42.105 95 54 1 56 149 200 294 2.13e-18 83.6
MS.gene002965.t1 AT3G04450 42.105 95 54 1 56 149 240 334 2.55e-18 83.6
MS.gene002965.t1 AT5G45580 58.730 63 26 0 50 112 3 65 3.46e-18 81.3
MS.gene002965.t1 AT5G45580 58.730 63 26 0 50 112 19 81 3.61e-18 81.6
MS.gene002965.t1 AT3G13040 49.383 81 41 0 56 136 243 323 1.18e-17 81.6
MS.gene002965.t1 AT3G13040 49.383 81 41 0 56 136 243 323 1.18e-17 81.6
MS.gene002965.t1 AT3G13040 49.383 81 41 0 56 136 243 323 1.18e-17 81.6
MS.gene002965.t1 AT2G20400 63.636 55 20 0 56 110 233 287 2.93e-17 80.5
MS.gene002965.t1 AT2G20400 63.636 55 20 0 56 110 233 287 3.22e-17 80.1
MS.gene002965.t1 AT3G04030 60.377 53 21 0 55 107 46 98 3.56e-17 80.1
MS.gene002965.t1 AT5G18240 62.264 53 20 0 55 107 46 98 3.96e-17 80.1
MS.gene002965.t1 AT5G18240 62.264 53 20 0 55 107 46 98 3.96e-17 80.1
MS.gene002965.t1 AT3G04030 60.377 53 21 0 55 107 46 98 4.16e-17 79.7
MS.gene002965.t1 AT5G18240 62.264 53 20 0 55 107 46 98 4.75e-17 79.7
MS.gene002965.t1 AT5G18240 62.264 53 20 0 55 107 46 98 4.75e-17 79.7
MS.gene002965.t1 AT5G18240 62.264 53 20 0 55 107 46 98 4.76e-17 79.7
MS.gene002965.t1 AT3G12730 59.649 57 23 0 55 111 24 80 8.41e-17 77.0
MS.gene002965.t1 AT2G01060 65.455 55 19 0 56 110 17 71 1.16e-16 77.4
MS.gene002965.t1 AT2G06020 52.542 59 28 0 49 107 81 139 1.86e-16 77.0
MS.gene002965.t1 AT5G06800 49.398 83 39 2 28 110 169 248 3.06e-16 76.3
MS.gene002965.t1 AT5G06800 42.727 110 55 3 28 132 169 275 3.86e-16 77.0
MS.gene002965.t1 AT4G13640 56.140 57 25 0 55 111 38 94 4.27e-16 76.3
MS.gene002965.t1 AT3G24120 56.140 57 25 0 55 111 42 98 4.68e-16 75.9
MS.gene002965.t1 AT4G13640 56.140 57 25 0 55 111 38 94 4.72e-16 75.9
MS.gene002965.t1 AT3G24120 56.140 57 25 0 55 111 42 98 4.82e-16 75.9
MS.gene002965.t1 AT1G79430 57.895 57 24 0 55 111 35 91 5.85e-16 76.3
MS.gene002965.t1 AT5G06800 49.398 83 39 2 28 110 169 248 1.56e-15 75.1
MS.gene002965.t1 AT1G69580 58.491 53 22 0 55 107 35 87 5.32e-15 73.6
MS.gene002965.t1 AT1G69580 58.491 53 22 0 55 107 35 87 5.36e-15 73.6
MS.gene002965.t1 AT3G04030 58.491 53 21 1 55 107 46 97 1.41e-14 72.4
MS.gene002965.t1 AT3G62670 35.849 106 56 3 52 145 209 314 9.74e-14 70.1
MS.gene002965.t1 AT2G03500 57.692 52 22 0 56 107 235 286 1.10e-12 67.0
MS.gene002965.t1 AT5G59570 55.357 56 24 1 52 107 139 193 1.71e-12 65.9
MS.gene002965.t1 AT5G59570 55.357 56 24 1 52 107 139 193 1.71e-12 65.9
MS.gene002965.t1 AT5G44190 46.269 67 35 1 53 119 146 211 1.85e-12 66.2
MS.gene002965.t1 AT1G25550 55.769 52 23 0 56 107 211 262 2.27e-12 65.9
MS.gene002965.t1 AT5G44190 46.269 67 35 1 53 119 146 211 2.55e-12 65.9
MS.gene002965.t1 AT4G37180 50.847 59 29 0 49 107 205 263 3.17e-12 65.5
MS.gene002965.t1 AT4G37180 50.847 59 29 0 49 107 212 270 4.15e-12 65.5
MS.gene002965.t1 AT3G46640 54.545 55 24 1 53 107 143 196 8.49e-12 64.3
MS.gene002965.t1 AT3G46640 54.545 55 24 1 53 107 143 196 8.49e-12 64.3
MS.gene002965.t1 AT2G40970 37.500 96 55 2 53 144 104 198 1.02e-11 63.2
MS.gene002965.t1 AT3G46640 54.545 55 24 1 53 107 143 196 1.31e-11 63.5
MS.gene002965.t1 AT1G25550 51.923 52 25 0 56 107 211 262 5.75e-11 61.6
MS.gene002965.t1 AT1G68670 53.846 52 24 0 56 107 217 268 6.09e-11 62.0
MS.gene002965.t1 AT4G37180 49.123 57 29 0 49 105 205 261 9.10e-11 60.8

Find 57 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTCCAGGGATGCTTAT+TGG 0.219949 2.4:-63811894 MS.gene002965:intron
GAATCTTTGTTGGTCGCTTT+TGG 0.263083 2.4:+63809624 None:intergenic
GTTTGGAGAATTACATTCTT+TGG 0.267769 2.4:+63812056 None:intergenic
CACACTTACATCCTCTTTGA+TGG 0.313928 2.4:-63811802 MS.gene002965:CDS
AATCAATTGTGATCTGTAAT+GGG 0.330104 2.4:-63811840 MS.gene002965:CDS
ATCCTCTTTGATGGTATTCT+CGG 0.352821 2.4:-63811793 MS.gene002965:CDS
GGACCTCCTGAGCTTGTTGA+TGG 0.365393 2.4:+63809550 None:intergenic
TTATATCTTCGAATCTTTGT+TGG 0.384293 2.4:+63809614 None:intergenic
CAATCAATTGTGATCTGTAA+TGG 0.385263 2.4:-63811841 MS.gene002965:CDS
ATTCACTCTCTCTCCTCTCC+TGG 0.393108 2.4:+63809591 None:intergenic
ATGAATTGTAAAACTAACTT+TGG 0.405423 2.4:+63813852 None:intergenic
TCATGTCAAAAGCCACCTTC+AGG 0.411764 2.4:-63813805 MS.gene002965:intron
TTTACAATTCATGAATATCA+AGG 0.423774 2.4:-63813841 MS.gene002965:CDS
TATTGGCTAGAGTCTTTCAA+TGG 0.428858 2.4:-63811877 MS.gene002965:CDS
CAATGTTATTGCAGATGTAC+AGG 0.430914 2.4:-63813606 MS.gene002965:intron
GACCTCCTGAGCTTGTTGAT+GGG 0.440748 2.4:+63809551 None:intergenic
CAAAGTTGCCTCGGCTTCGT+TGG 0.452111 2.4:-63814165 MS.gene002965:CDS
GTGCATGCAGTTCAAAGGCT+TGG 0.455826 2.4:-63814118 MS.gene002965:CDS
AAACAAGAGCAGATGATTGA+AGG 0.472078 2.4:-63813577 MS.gene002965:intron
ACAAAGCAACGGTGAAGATC+TGG 0.473150 2.4:+63814139 None:intergenic
TTCTCCTACTAGCGGAGTTG+TGG 0.487718 2.4:-63814299 MS.gene002965:CDS
AGAGAGACATCATTTGTGTC+TGG 0.491055 2.4:+63809529 None:intergenic
GGCAACTTTGATCGAACATA+AGG 0.496488 2.4:+63814178 None:intergenic
CTGTCCCCATCAACAAGCTC+AGG 0.503401 2.4:-63809556 MS.gene002965:CDS
CCAAGCTACTATCTGAATCA+TGG 0.514407 2.4:-63812079 MS.gene002965:CDS
ATGTTCGATCAAAGTTGCCT+CGG 0.517554 2.4:-63814174 MS.gene002965:CDS
TTTACCAGCTGCAAAGAGAA+AGG 0.520218 2.4:-63812152 MS.gene002965:intron
TTACAATTCATGAATATCAA+GGG 0.527486 2.4:-63813840 MS.gene002965:CDS
GCTTTGTGCATGCAGTTCAA+AGG 0.532535 2.4:-63814123 MS.gene002965:CDS
ACCTCCTGAGCTTGTTGATG+GGG 0.534570 2.4:+63809552 None:intergenic
CGCACATCAGAAGGTTGTGA+AGG 0.540162 2.4:+63814268 None:intergenic
ATTTACGTACTTGAACAGTC+TGG 0.542233 2.4:+63811767 None:intergenic
CATGCAGTTCAAAGGCTTGG+AGG 0.546546 2.4:-63814115 MS.gene002965:CDS
GAGTCTTTCAATGGAACTCA+AGG 0.550479 2.4:-63811868 MS.gene002965:CDS
GCTTGGAACAAGGGCTGAGG+AGG 0.553779 2.4:+63812096 None:intergenic
CCATGATTCAGATAGTAGCT+TGG 0.557206 2.4:+63812079 None:intergenic
GTGTCCACAACTCCGCTAGT+AGG 0.568408 2.4:+63814295 None:intergenic
TCTTCTTCTTCTCCTACTAG+CGG 0.575646 2.4:-63814307 MS.gene002965:CDS
TACAATTCATGAATATCAAG+GGG 0.575681 2.4:-63813839 MS.gene002965:CDS
TGAAAAGTTCGCACATCAGA+AGG 0.579697 2.4:+63814259 None:intergenic
CTCTTTGATGGTATTCTCGG+AGG 0.601250 2.4:-63811790 MS.gene002965:CDS
CAGATAGTAGCTTGGAACAA+GGG 0.609739 2.4:+63812087 None:intergenic
TCAGATAGTAGCTTGGAACA+AGG 0.613357 2.4:+63812086 None:intergenic
GTAGCTTGGAACAAGGGCTG+AGG 0.617170 2.4:+63812093 None:intergenic
TCCCCATCAACAAGCTCAGG+AGG 0.619846 2.4:-63809553 MS.gene002965:CDS
TTCGAAGATATAACCAGGAG+AGG 0.626534 2.4:-63809604 MS.gene002965:CDS
GAACTGCATGCACAAAGCAA+CGG 0.628677 2.4:+63814128 None:intergenic
TCTGGTGTCCAACGAAGCCG+AGG 0.632658 2.4:+63814157 None:intergenic
CGAACATAAGGTCTCACCAC+AGG 0.634731 2.4:+63814190 None:intergenic
GCACATCAGAAGGTTGTGAA+GGG 0.634756 2.4:+63814269 None:intergenic
AGCTGCAAAGAGAAAGGACA+TGG 0.645199 2.4:-63812146 MS.gene002965:CDS
CTCCGAGAATACCATCAAAG+AGG 0.653875 2.4:+63811791 None:intergenic
GATGAGTCTAAAAGCACCTG+TGG 0.662178 2.4:-63814206 MS.gene002965:CDS
AAAGATTCGAAGATATAACC+AGG 0.674187 2.4:-63809609 MS.gene002965:CDS
AGAGAAAGAGTACCTGAAGG+TGG 0.689810 2.4:+63813793 None:intergenic
ATCAATTGTGATCTGTAATG+GGG 0.697885 2.4:-63811839 MS.gene002965:CDS
TCTGATGAGAATCTAAACGA+CGG 0.728967 2.4:+63814236 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGGAAAAAAAAAAAAAATT+TGG + chr2.4:63810189-63810208 None:intergenic 10.0%
!!! AAGTAGAATTTTTTATTATA+GGG - chr2.4:63810698-63810717 MS.gene002965:intron 10.0%
!!! GAAATAAATTTTAATCAATA+AGG + chr2.4:63814062-63814081 None:intergenic 10.0%
!!! TAAATGTATATTTTTTTAAC+AGG + chr2.4:63811496-63811515 None:intergenic 10.0%
!! AAATAAAGGACTATTTAAAT+AGG + chr2.4:63812580-63812599 None:intergenic 15.0%
!! AATATTGAATAAAAGAACTA+GGG + chr2.4:63809756-63809775 None:intergenic 15.0%
!! AGGATAATATTAGTAAAATA+AGG - chr2.4:63813768-63813787 MS.gene002965:intron 15.0%
!! ATAAAAAGTTGTTTGAAAAA+TGG + chr2.4:63813315-63813334 None:intergenic 15.0%
!! GAACAATAAAAAAAAAAGTT+TGG + chr2.4:63811793-63811812 None:intergenic 15.0%
!! TAAAAAAACGAACATAAATA+AGG + chr2.4:63810141-63810160 None:intergenic 15.0%
!! TAATATTGAATAAAAGAACT+AGG + chr2.4:63809757-63809776 None:intergenic 15.0%
!! TATTTATATAAACTACTTTG+AGG - chr2.4:63812190-63812209 MS.gene002965:intron 15.0%
!!! ATGATTTTTTTAATAGTAGA+TGG + chr2.4:63809877-63809896 None:intergenic 15.0%
!!! CAAACTTTTATAAAAACTTA+CGG + chr2.4:63810792-63810811 None:intergenic 15.0%
!!! CATTGAAATTTCAAAATTTT+AGG + chr2.4:63810208-63810227 None:intergenic 15.0%
!!! GAAGTAGAATTTTTTATTAT+AGG - chr2.4:63810697-63810716 MS.gene002965:intron 15.0%
!!! GATTAAAAAGTATTTTATGT+TGG - chr2.4:63813708-63813727 MS.gene002965:intron 15.0%
!!! GGGATAATATATATTTTTTT+AGG - chr2.4:63812131-63812150 MS.gene002965:CDS 15.0%
!!! TAAGGGAAAATATATTTTAT+TGG + chr2.4:63814044-63814063 None:intergenic 15.0%
!!! TATTAATCAAACATTTTTAG+TGG + chr2.4:63810078-63810097 None:intergenic 15.0%
!!! TTATGTTGGATTTTAATTTT+GGG - chr2.4:63813722-63813741 MS.gene002965:intron 15.0%
!!! TTTATGTTGGATTTTAATTT+TGG - chr2.4:63813721-63813740 MS.gene002965:intron 15.0%
!! AATACATTAGACATATTGTT+TGG - chr2.4:63810383-63810402 MS.gene002965:intron 20.0%
!! AATAGAACAAAACAAGAAAT+AGG - chr2.4:63810472-63810491 MS.gene002965:intron 20.0%
!! ATAAGAGCAAATATGTTAAA+CGG + chr2.4:63814016-63814035 None:intergenic 20.0%
!! ATGAATTGTAAAACTAACTT+TGG + chr2.4:63809980-63809999 None:intergenic 20.0%
!! CAAAAAAAAAAGCTTACAAA+AGG + chr2.4:63812379-63812398 None:intergenic 20.0%
!! CTAGTGATAATTAATATGTA+TGG + chr2.4:63812961-63812980 None:intergenic 20.0%
!! GGTATTACTAATATTAATTG+TGG - chr2.4:63810273-63810292 MS.gene002965:intron 20.0%
!! GTTATTAAATGATTGAATGT+TGG + chr2.4:63812839-63812858 None:intergenic 20.0%
!! TAAAGTGAAATAGACATTTA+CGG + chr2.4:63812546-63812565 None:intergenic 20.0%
!! TAAATGTCTATTTCACTTTA+AGG - chr2.4:63812546-63812565 MS.gene002965:intron 20.0%
!! TCTAAATAGTGAAATTTGAT+TGG - chr2.4:63810976-63810995 MS.gene002965:intron 20.0%
!! TTAACATATTTGCTCTTATT+TGG - chr2.4:63814017-63814036 MS.gene002965:intron 20.0%
!! TTACAATTCATGAATATCAA+GGG - chr2.4:63809989-63810008 MS.gene002965:intron 20.0%
!! TTTACAATTCATGAATATCA+AGG - chr2.4:63809988-63810007 MS.gene002965:intron 20.0%
!!! ACAAAATGATGTATTTTTCT+AGG + chr2.4:63810581-63810600 None:intergenic 20.0%
!!! ACTTATTTAAGTTAATAGCT+CGG + chr2.4:63812727-63812746 None:intergenic 20.0%
!!! CAAACTTACAAAAATTTTGT+AGG + chr2.4:63812342-63812361 None:intergenic 20.0%
!!! CATTTTCCTATAAATTATGA+TGG - chr2.4:63811275-63811294 MS.gene002965:intron 20.0%
!!! CTTTACAATGCATATAATTT+TGG - chr2.4:63811899-63811918 MS.gene002965:intron 20.0%
!!! CTTTTGTAAGCTTTTTTTTT+TGG - chr2.4:63812377-63812396 MS.gene002965:intron 20.0%
!!! TGACTTGAAAACATTATTTT+TGG - chr2.4:63809913-63809932 MS.gene002965:intron 20.0%
!!! TTATTGGCTAACATTAATTT+CGG + chr2.4:63811109-63811128 None:intergenic 20.0%
!!! TTTTGAATTGATTTTGTCTT+CGG - chr2.4:63812897-63812916 MS.gene002965:intron 20.0%
! AAAATGCTAGATATCAAGAA+TGG + chr2.4:63811261-63811280 None:intergenic 25.0%
! AAACATGTAAATAGACTTTC+AGG + chr2.4:63812430-63812449 None:intergenic 25.0%
! AATCAATTGTGATCTGTAAT+GGG - chr2.4:63811989-63812008 MS.gene002965:intron 25.0%
! AATGTTAGCCAATAAAATCT+CGG - chr2.4:63811114-63811133 MS.gene002965:intron 25.0%
! AGTAATATTTGATGTCACTA+GGG + chr2.4:63813985-63814004 None:intergenic 25.0%
! ATATGTATGCTTGTATTACA+GGG - chr2.4:63809948-63809967 MS.gene002965:intron 25.0%
! ATTGAGGTCTATAATTTCTT+TGG + chr2.4:63810661-63810680 None:intergenic 25.0%
! ATTTCTCTCTTAATTATTCC+AGG - chr2.4:63811923-63811942 MS.gene002965:intron 25.0%
! CAAAAATTCCAAAAAGAACA+TGG - chr2.4:63813466-63813485 MS.gene002965:intron 25.0%
! CATAGTATTAGTATGTAGAA+AGG + chr2.4:63812109-63812128 None:intergenic 25.0%
! CATATTCAAAAAACTGTTTC+AGG + chr2.4:63811303-63811322 None:intergenic 25.0%
! CATTATGATATGTGATTCAA+TGG - chr2.4:63811544-63811563 MS.gene002965:intron 25.0%
! CTACATACTAATACTATGTT+GGG - chr2.4:63812111-63812130 MS.gene002965:CDS 25.0%
! GACTATTTAAATAGGCTTTA+AGG + chr2.4:63812572-63812591 None:intergenic 25.0%
! TAAATGACAACAGATAGATA+GGG + chr2.4:63811360-63811379 None:intergenic 25.0%
! TACAATTCATGAATATCAAG+GGG - chr2.4:63809990-63810009 MS.gene002965:intron 25.0%
! TAGTAATATTTGATGTCACT+AGG + chr2.4:63813986-63814005 None:intergenic 25.0%
! TATATGTATGCTTGTATTAC+AGG - chr2.4:63809947-63809966 MS.gene002965:intron 25.0%
! TATTAGTAAAATAAGGAGTG+TGG - chr2.4:63813775-63813794 MS.gene002965:intron 25.0%
! TCAAGTAACAACTCAAATAA+AGG + chr2.4:63812594-63812613 None:intergenic 25.0%
! TCAAGTCAAATTAACAACAA+AGG + chr2.4:63809901-63809920 None:intergenic 25.0%
! TCTACATACTAATACTATGT+TGG - chr2.4:63812110-63812129 MS.gene002965:CDS 25.0%
! TCTTTGTAAATGGAAGAAAT+AGG - chr2.4:63810351-63810370 MS.gene002965:intron 25.0%
! TGTGTATGAAATATTGAGTA+AGG + chr2.4:63813344-63813363 None:intergenic 25.0%
! TTATATCTTCGAATCTTTGT+TGG + chr2.4:63814218-63814237 None:intergenic 25.0%
! TTGAATCACATATCATAATG+TGG + chr2.4:63811544-63811563 None:intergenic 25.0%
! TTGAGGTCTATAATTTCTTT+GGG + chr2.4:63810660-63810679 None:intergenic 25.0%
! TTTCTCTCTTAATTATTCCA+GGG - chr2.4:63811924-63811943 MS.gene002965:intron 25.0%
!! AAATGATTGAATGTTGGTTA+AGG + chr2.4:63812833-63812852 None:intergenic 25.0%
!! AATCAGACTTTTAAATAGAC+TGG + chr2.4:63812404-63812423 None:intergenic 25.0%
!! AATGATTGAATGTTGGTTAA+GGG + chr2.4:63812832-63812851 None:intergenic 25.0%
!! ATACTTTATCAAGTCTTATC+CGG - chr2.4:63811416-63811435 MS.gene002965:intron 25.0%
!! CTTATTTAAGTTAATAGCTC+GGG + chr2.4:63812726-63812745 None:intergenic 25.0%
!! TATGTTCCTCAAACAATTTT+TGG - chr2.4:63811319-63811338 MS.gene002965:intron 25.0%
!! TATTGGCTAACATTAATTTC+GGG + chr2.4:63811108-63811127 None:intergenic 25.0%
!! TTACAAAAATTTTGTAGGTC+AGG + chr2.4:63812337-63812356 None:intergenic 25.0%
!!! AAGTTGTTTTTGAAGAATGA+TGG + chr2.4:63813386-63813405 None:intergenic 25.0%
!!! AGTTTTAAAAAAGTGTTCTG+AGG + chr2.4:63810738-63810757 None:intergenic 25.0%
!!! ATTTTTCTAGGAACAAAATC+TGG + chr2.4:63810569-63810588 None:intergenic 25.0%
!!! GATATTATTTTGGTTTGGTT+CGG - chr2.4:63813916-63813935 MS.gene002965:intron 25.0%
!!! TACCACGTTTATTTTTATTG+AGG + chr2.4:63810677-63810696 None:intergenic 25.0%
!!! TTCCTCTCTTCTTTTATTTA+CGG - chr2.4:63811810-63811829 MS.gene002965:CDS 25.0%
AAAGATTCGAAGATATAACC+AGG - chr2.4:63814220-63814239 MS.gene002965:CDS 30.0%
AAATAATATCCGACCTTGTT+TGG + chr2.4:63813906-63813925 None:intergenic 30.0%
AAATAGACATTTACGGTGAT+AGG + chr2.4:63812539-63812558 None:intergenic 30.0%
AAATGCATGTTATCATGTCA+CGG - chr2.4:63810313-63810332 MS.gene002965:intron 30.0%
ATCAATTGTGATCTGTAATG+GGG - chr2.4:63811990-63812009 MS.gene002965:intron 30.0%
ATTGATGAATGATGCATGTA+TGG + chr2.4:63813441-63813460 None:intergenic 30.0%
CAATCAATTGTGATCTGTAA+TGG - chr2.4:63811988-63812007 MS.gene002965:intron 30.0%
CAGGAACCATCATAATTTAT+AGG + chr2.4:63811284-63811303 None:intergenic 30.0%
CATATTGTTTGGTACAATAG+AGG - chr2.4:63810394-63810413 MS.gene002965:intron 30.0%
CATGTATGCATCTTTGTAAA+TGG - chr2.4:63810341-63810360 MS.gene002965:intron 30.0%
CTAAATGACAACAGATAGAT+AGG + chr2.4:63811361-63811380 None:intergenic 30.0%
GACCTCAATAAAAATAAACG+TGG - chr2.4:63810672-63810691 MS.gene002965:intron 30.0%
GTAATATTTGATGTCACTAG+GGG + chr2.4:63813984-63814003 None:intergenic 30.0%
GTTTGGAGAATTACATTCTT+TGG + chr2.4:63811776-63811795 None:intergenic 30.0%
TATGTATGCTTGTATTACAG+GGG - chr2.4:63809949-63809968 MS.gene002965:intron 30.0%
TGACCTTACATTCATTTGAT+GGG - chr2.4:63814105-63814124 MS.gene002965:intron 30.0%
TGATAGAAAGAAGTGGAATT+CGG + chr2.4:63812218-63812237 None:intergenic 30.0%
TGATGAATTCAAGAATGACA+TGG + chr2.4:63811231-63811250 None:intergenic 30.0%
TTGACCTTACATTCATTTGA+TGG - chr2.4:63814104-63814123 MS.gene002965:intron 30.0%
TTGTTGGTCAACAAAATTGT+AGG + chr2.4:63812284-63812303 None:intergenic 30.0%
! AAAAAAGTGTGTTTGTGTGT+TGG + chr2.4:63812241-63812260 None:intergenic 30.0%
! AACAAGGTCGGATATTATTT+TGG - chr2.4:63813906-63813925 MS.gene002965:intron 30.0%
! ACCTTGCCTTATTAATAAAC+AGG - chr2.4:63812766-63812785 MS.gene002965:intron 30.0%
! CAATTTTGTTGACCAACAAT+AGG - chr2.4:63812285-63812304 MS.gene002965:intron 30.0%
!! AATGATGGATGAATGAATCT+TGG + chr2.4:63813371-63813390 None:intergenic 30.0%
!! AGTTTGTGTATTTGCTGTAT+TGG - chr2.4:63810806-63810825 MS.gene002965:intron 30.0%
!! GTTTGTGTATTTGCTGTATT+GGG - chr2.4:63810807-63810826 MS.gene002965:intron 30.0%
!! TTTCTCTTTTTGCTATGTGA+CGG - chr2.4:63811385-63811404 MS.gene002965:intron 30.0%
AAACAAGAGCAGATGATTGA+AGG - chr2.4:63810252-63810271 MS.gene002965:intron 35.0%
AAAGCATACGAAGCTTGATA+CGG + chr2.4:63812689-63812708 None:intergenic 35.0%
AACATAAGTTTGTGTGAGGT+AGG - chr2.4:63813748-63813767 MS.gene002965:intron 35.0%
AAGCAAATCTTATCAGCACA+AGG + chr2.4:63811446-63811465 None:intergenic 35.0%
AAGTCGCCAAAAATTGTTTG+AGG + chr2.4:63811328-63811347 None:intergenic 35.0%
AATGATGCATGTATGGATCA+TGG + chr2.4:63813434-63813453 None:intergenic 35.0%
ACAACAGATAGATAGGGAAT+AGG + chr2.4:63811354-63811373 None:intergenic 35.0%
ACCTCACACAAACTTATGTT+AGG + chr2.4:63813748-63813767 None:intergenic 35.0%
AGAAACCGAACCAAACTAAT+CGG - chr2.4:63813148-63813167 MS.gene002965:intron 35.0%
ATTATTCCAGGGATGCTTAT+TGG - chr2.4:63811935-63811954 MS.gene002965:intron 35.0%
ATTTACGTACTTGAACAGTC+TGG + chr2.4:63812065-63812084 None:intergenic 35.0%
CAATCAAAACCGATCTAGTT+TGG + chr2.4:63813860-63813879 None:intergenic 35.0%
CAATGTTATTGCAGATGTAC+AGG - chr2.4:63810223-63810242 MS.gene002965:intron 35.0%
CACCGTAAATAAAAGAAGAG+AGG + chr2.4:63811815-63811834 None:intergenic 35.0%
CCTTAAAGTCTATTTCACGA+AGG - chr2.4:63812509-63812528 MS.gene002965:intron 35.0%
CCTTCGTGAAATAGACTTTA+AGG + chr2.4:63812512-63812531 None:intergenic 35.0%
GACCTTACATTCATTTGATG+GGG - chr2.4:63814106-63814125 MS.gene002965:intron 35.0%
GCCTGTTTATTAATAAGGCA+AGG + chr2.4:63812770-63812789 None:intergenic 35.0%
GGCTTGCCTGTTTATTAATA+AGG + chr2.4:63812775-63812794 None:intergenic 35.0%
TAATGTGTGTTGTGTTAGTG+TGG - chr2.4:63813000-63813019 MS.gene002965:intron 35.0%
TCTGATGAGAATCTAAACGA+CGG + chr2.4:63809596-63809615 None:intergenic 35.0%
TGAACCAAACCAAACTAGAT+CGG - chr2.4:63813848-63813867 MS.gene002965:CDS 35.0%
TGTTGAATGTGTGACATCTA+GGG - chr2.4:63813023-63813042 MS.gene002965:intron 35.0%
! AAAACCGATCTAGTTTGGTT+TGG + chr2.4:63813855-63813874 None:intergenic 35.0%
! AAAATTTTGTAGGTCAGGCT+CGG + chr2.4:63812332-63812351 None:intergenic 35.0%
! ACTTTTCTCTATCTTGGTCA+CGG + chr2.4:63810530-63810549 None:intergenic 35.0%
! ATAAGGAGTGTGGTTATCAT+CGG - chr2.4:63813785-63813804 MS.gene002965:intron 35.0%
! ATCCTCTTTGATGGTATTCT+CGG - chr2.4:63812036-63812055 MS.gene002965:intron 35.0%
! CACGTTTTCCATGTTCTTTT+TGG + chr2.4:63813477-63813496 None:intergenic 35.0%
! TATTGGCTAGAGTCTTTCAA+TGG - chr2.4:63811952-63811971 MS.gene002965:intron 35.0%
! TGATGATGAGAGAAAGTGAA+TGG - chr2.4:63813686-63813705 MS.gene002965:intron 35.0%
!! ATCTAGTTTGGTTTGGTTCA+TGG + chr2.4:63813848-63813867 None:intergenic 35.0%
!! CAAACTAGATCGGTTTTGAT+TGG - chr2.4:63813858-63813877 MS.gene002965:CDS 35.0%
!! CTCTCTTCTTTTATTTACGG+TGG - chr2.4:63811813-63811832 MS.gene002965:CDS 35.0%
!! TAAGGTAATTAGCTTGCAAG+AGG + chr2.4:63810123-63810142 None:intergenic 35.0%
!! TGAATTGATTTTGTCTTCGG+AGG - chr2.4:63812900-63812919 MS.gene002965:intron 35.0%
!! TTATCATCGGATTGGTTCAT+CGG - chr2.4:63813798-63813817 MS.gene002965:intron 35.0%
!!! GACGTTACTTTTCTCTATCT+TGG + chr2.4:63810536-63810555 None:intergenic 35.0%
!!! GGTCGGATATTATTTTGGTT+TGG - chr2.4:63813911-63813930 MS.gene002965:intron 35.0%
!!! TAGATCGGTTTTGATTGGTT+CGG - chr2.4:63813863-63813882 MS.gene002965:CDS 35.0%
!!! TATTTTGGTTTGGTTCGGTT+TGG - chr2.4:63813921-63813940 MS.gene002965:intron 35.0%
AGAGAGACATCATTTGTGTC+TGG + chr2.4:63814303-63814322 None:intergenic 40.0%
ATGTTCGATCAAAGTTGCCT+CGG - chr2.4:63809655-63809674 MS.gene002965:intron 40.0%
CAAACCGATGAAGAGTTCAT+CGG + chr2.4:63813097-63813116 None:intergenic 40.0%
CACACTTACATCCTCTTTGA+TGG - chr2.4:63812027-63812046 MS.gene002965:intron 40.0%
CAGATAGTAGCTTGGAACAA+GGG + chr2.4:63811745-63811764 None:intergenic 40.0%
CCAAGCTACTATCTGAATCA+TGG - chr2.4:63811750-63811769 MS.gene002965:intron 40.0%
CCATGATTCAGATAGTAGCT+TGG + chr2.4:63811753-63811772 None:intergenic 40.0%
GAAAGGAGAGACTAATTGAG+AGG + chr2.4:63812092-63812111 None:intergenic 40.0%
GACCCCATCAAATGAATGTA+AGG + chr2.4:63814111-63814130 None:intergenic 40.0%
GAGTCTTTCAATGGAACTCA+AGG - chr2.4:63811961-63811980 MS.gene002965:intron 40.0%
GCCTAACATAAGTTTGTGTG+AGG - chr2.4:63813744-63813763 MS.gene002965:intron 40.0%
GGCAACTTTGATCGAACATA+AGG + chr2.4:63809654-63809673 None:intergenic 40.0%
GTGTTGAATGTGTGACATCT+AGG - chr2.4:63813022-63813041 MS.gene002965:intron 40.0%
GTTGAATGTGTGACATCTAG+GGG - chr2.4:63813024-63813043 MS.gene002965:intron 40.0%
GTTTCAAACCGAACCAAACA+AGG - chr2.4:63813890-63813909 MS.gene002965:intron 40.0%
TAAGAGATGAACGATCTCAG+CGG - chr2.4:63813583-63813602 MS.gene002965:CDS 40.0%
TAGGTGTACGTAAGCATAAC+TGG - chr2.4:63810491-63810510 MS.gene002965:intron 40.0%
TCAGATAGTAGCTTGGAACA+AGG + chr2.4:63811746-63811765 None:intergenic 40.0%
TCTTCTTCTTCTCCTACTAG+CGG - chr2.4:63809522-63809541 MS.gene002965:CDS 40.0%
TGAAAAGTTCGCACATCAGA+AGG + chr2.4:63809573-63809592 None:intergenic 40.0%
TTCGAAGATATAACCAGGAG+AGG - chr2.4:63814225-63814244 MS.gene002965:CDS 40.0%
TTTACCAGCTGCAAAGAGAA+AGG - chr2.4:63811677-63811696 MS.gene002965:intron 40.0%
! ATATCCGACCTTGTTTGGTT+CGG + chr2.4:63813901-63813920 None:intergenic 40.0%
! ATTGAATGTTGGTTAAGGGC+GGG + chr2.4:63812828-63812847 None:intergenic 40.0%
! GAACAATGAGTTGACAGCTA+GGG - chr2.4:63813620-63813639 MS.gene002965:intron 40.0%
! GATTGAATGTTGGTTAAGGG+CGG + chr2.4:63812829-63812848 None:intergenic 40.0%
! GTGGCTTTTGACATGAGATA+TGG + chr2.4:63810020-63810039 None:intergenic 40.0%
! TGAACAATGAGTTGACAGCT+AGG - chr2.4:63813619-63813638 MS.gene002965:intron 40.0%
!! AACTCTTCATCGGTTTGGAT+TGG - chr2.4:63813100-63813119 MS.gene002965:intron 40.0%
!! CCAAACCGATTAGTTTGGTT+CGG + chr2.4:63813156-63813175 None:intergenic 40.0%
!! CCAAACTAATCGGTTTGGTT+CGG - chr2.4:63813158-63813177 MS.gene002965:intron 40.0%
!! GAATCTTTGTTGGTCGCTTT+TGG + chr2.4:63814208-63814227 None:intergenic 40.0%
!! GTGTTGGTGATAGAAAGAAG+TGG + chr2.4:63812225-63812244 None:intergenic 40.0%
!! TGAAGAGAAAGAGTACCTGA+AGG + chr2.4:63810042-63810061 None:intergenic 40.0%
!! TTCATCGGTTTGGATTGGTT+CGG - chr2.4:63813105-63813124 MS.gene002965:intron 40.0%
!! TTTGGTTCGGTTTGGACTTT+CGG - chr2.4:63813929-63813948 MS.gene002965:intron 40.0%
AACTCATTGTTCATCGCCAC+CGG + chr2.4:63813612-63813631 None:intergenic 45.0%
ACAAAGCAACGGTGAAGATC+TGG + chr2.4:63809693-63809712 None:intergenic 45.0%
AGCTGCAAAGAGAAAGGACA+TGG - chr2.4:63811683-63811702 MS.gene002965:intron 45.0%
ATGTCCTTTCTCTTTGCAGC+TGG + chr2.4:63811684-63811703 None:intergenic 45.0%
CAAACCGAACCAAACAAGGT+CGG - chr2.4:63813894-63813913 MS.gene002965:intron 45.0%
CCGAACCAAACTAATCGGTT+TGG - chr2.4:63813153-63813172 MS.gene002965:intron 45.0%
CGAACCGATGAACTCTTCAT+CGG - chr2.4:63813090-63813109 MS.gene002965:intron 45.0%
CTCCGAGAATACCATCAAAG+AGG + chr2.4:63812041-63812060 None:intergenic 45.0%
CTTATCAGCACAAGGTGTAC+CGG + chr2.4:63811438-63811457 None:intergenic 45.0%
CTTGCAAGAGGTGGAAAGAA+TGG + chr2.4:63810111-63810130 None:intergenic 45.0%
GAACTGCATGCACAAAGCAA+CGG + chr2.4:63809704-63809723 None:intergenic 45.0%
GAGTGTGGTTATCATCGGAT+TGG - chr2.4:63813790-63813809 MS.gene002965:intron 45.0%
GCACATCAGAAGGTTGTGAA+GGG + chr2.4:63809563-63809582 None:intergenic 45.0%
GCTTTGTGCATGCAGTTCAA+AGG - chr2.4:63809706-63809725 MS.gene002965:intron 45.0%
TACGGGCCTATAAGTGTCTA+CGG + chr2.4:63812796-63812815 None:intergenic 45.0%
TCATGTCAAAAGCCACCTTC+AGG - chr2.4:63810024-63810043 MS.gene002965:intron 45.0%
! CCGAACCAAACCGATTAGTT+TGG + chr2.4:63813161-63813180 None:intergenic 45.0%
! CGATGAACTCTTCATCGGTT+TGG - chr2.4:63813095-63813114 MS.gene002965:intron 45.0%
! CGATGAAGAGTTCATCGGTT+CGG + chr2.4:63813092-63813111 None:intergenic 45.0%
! CTCTTTGATGGTATTCTCGG+AGG - chr2.4:63812039-63812058 MS.gene002965:intron 45.0%
! GGTGCTTTTAGACTCATCTC+TGG + chr2.4:63809621-63809640 None:intergenic 45.0%
! TCATTCCGTTTTGCTCCTCA+GGG - chr2.4:63814180-63814199 MS.gene002965:CDS 45.0%
! TGTGACATCTAGGGGTGTAA+CGG - chr2.4:63813032-63813051 MS.gene002965:intron 45.0%
! TTCATTCCGTTTTGCTCCTC+AGG - chr2.4:63814179-63814198 MS.gene002965:CDS 45.0%
!! AGAGAAAGAGTACCTGAAGG+TGG + chr2.4:63810039-63810058 None:intergenic 45.0%
!! CTAATCGGTTTGGTTCGGTT+TGG - chr2.4:63813163-63813182 MS.gene002965:intron 45.0%
!! GATGAGTCTAAAAGCACCTG+TGG - chr2.4:63809623-63809642 MS.gene002965:CDS 45.0%
!! GGATTGGTTCATCGGTTTCA+CGG - chr2.4:63813806-63813825 MS.gene002965:CDS 45.0%
!! GGTAATTAGCTTGCAAGAGG+TGG + chr2.4:63810120-63810139 None:intergenic 45.0%
!! TGGTTCGGTTTGGATTGGTT+CGG - chr2.4:63813173-63813192 MS.gene002965:intron 45.0%
!! TGTAACGGTTCGGTTTGGAT+TGG - chr2.4:63813047-63813066 MS.gene002965:intron 45.0%
!! TTTGGATTGGTTCGGTTGCT+CGG - chr2.4:63813181-63813200 MS.gene002965:intron 45.0%
!!! CGGTTTTGATTGGTTCGGAT+CGG - chr2.4:63813868-63813887 MS.gene002965:intron 45.0%
!! AGAAATTTAAATTAAAAAAT+AGG + chr2.4:63809791-63809810 None:intergenic 5.0%
!! TAAATAAAATTAAAATCTAA+TGG - chr2.4:63811194-63811213 MS.gene002965:intron 5.0%
!!! AAATAAATTTTAATCAATAA+GGG + chr2.4:63814061-63814080 None:intergenic 5.0%
AAGGGCGGGAATAGGTCATA+CGG + chr2.4:63812814-63812833 None:intergenic 50.0%
AGGCTCGGACCTATCAAAGT+CGG + chr2.4:63812317-63812336 None:intergenic 50.0%
AGGTCAGACCCGACTTTGAT+AGG - chr2.4:63812305-63812324 MS.gene002965:intron 50.0%
AGTCGGGTCTGACCTATTGT+TGG + chr2.4:63812300-63812319 None:intergenic 50.0%
ATTCACTCTCTCTCCTCTCC+TGG + chr2.4:63814241-63814260 None:intergenic 50.0%
CAATAAAATCTCGGCCTGCC+CGG - chr2.4:63811123-63811142 MS.gene002965:intron 50.0%
CATGCAGTTCAAAGGCTTGG+AGG - chr2.4:63809714-63809733 MS.gene002965:intron 50.0%
CGAACATAAGGTCTCACCAC+AGG + chr2.4:63809642-63809661 None:intergenic 50.0%
CGCACATCAGAAGGTTGTGA+AGG + chr2.4:63809564-63809583 None:intergenic 50.0%
CTCTAGCCAATAAGCATCCC+TGG + chr2.4:63811944-63811963 None:intergenic 50.0%
GGCAAGCCGTAGACACTTAT+AGG - chr2.4:63812787-63812806 MS.gene002965:intron 50.0%
GTGCATGCAGTTCAAAGGCT+TGG - chr2.4:63809711-63809730 MS.gene002965:intron 50.0%
TTCTCCTACTAGCGGAGTTG+TGG - chr2.4:63809530-63809549 MS.gene002965:CDS 50.0%
! CACTAGGGGTGTAAGTGGTT+TGG + chr2.4:63813970-63813989 None:intergenic 50.0%
! CATCTAGGGGTGTAACGGTT+CGG - chr2.4:63813037-63813056 MS.gene002965:intron 50.0%
! CATTCCGTTTTGCTCCTCAG+GGG - chr2.4:63814181-63814200 MS.gene002965:CDS 50.0%
! GATGTCACTAGGGGTGTAAG+TGG + chr2.4:63813975-63813994 None:intergenic 50.0%
! TGTTGGTTAAGGGCGGGAAT+AGG + chr2.4:63812822-63812841 None:intergenic 50.0%
!! ACCTCCTGAGCTTGTTGATG+GGG + chr2.4:63814280-63814299 None:intergenic 50.0%
!! CGGTTTGGTTCGGTTTGGAT+TGG - chr2.4:63813168-63813187 MS.gene002965:intron 50.0%
!! GACCTCCTGAGCTTGTTGAT+GGG + chr2.4:63814281-63814300 None:intergenic 50.0%
ACCCACCACCCCATGATTTC+CGG + chr2.4:63811145-63811164 None:intergenic 55.0%
AGGGCGGGAATAGGTCATAC+GGG + chr2.4:63812813-63812832 None:intergenic 55.0%
CAAAGTTGCCTCGGCTTCGT+TGG - chr2.4:63809664-63809683 MS.gene002965:intron 55.0%
CTGTCCCCATCAACAAGCTC+AGG - chr2.4:63814273-63814292 MS.gene002965:CDS 55.0%
GGCTCGGACCTATCAAAGTC+GGG + chr2.4:63812316-63812335 None:intergenic 55.0%
GTAGCTTGGAACAAGGGCTG+AGG + chr2.4:63811739-63811758 None:intergenic 55.0%
GTGTCCACAACTCCGCTAGT+AGG + chr2.4:63809537-63809556 None:intergenic 55.0%
TCCCCATCAACAAGCTCAGG+AGG - chr2.4:63814276-63814295 MS.gene002965:CDS 55.0%
TGAACGATCTCAGCGGTGAC+CGG - chr2.4:63813590-63813609 MS.gene002965:CDS 55.0%
TGGTCCCCTGAGGAGCAAAA+CGG + chr2.4:63814188-63814207 None:intergenic 55.0%
! CGGGCAGGCCGAGATTTTAT+TGG + chr2.4:63811125-63811144 None:intergenic 55.0%
!! AGGGGTGTAACGGTTCGGTT+TGG - chr2.4:63813042-63813061 MS.gene002965:intron 55.0%
!! GGACCTCCTGAGCTTGTTGA+TGG + chr2.4:63814282-63814301 None:intergenic 55.0%
CCCACCACCCCATGATTTCC+GGG + chr2.4:63811144-63811163 None:intergenic 60.0%
CCCGGAAATCATGGGGTGGT+GGG - chr2.4:63811141-63811160 MS.gene002965:intron 60.0%
GCTTGGAACAAGGGCTGAGG+AGG + chr2.4:63811736-63811755 None:intergenic 60.0%
TCGGCCTGCCCGGAAATCAT+GGG - chr2.4:63811133-63811152 MS.gene002965:intron 60.0%
TCTGGTGTCCAACGAAGCCG+AGG + chr2.4:63809675-63809694 None:intergenic 60.0%
!!! TGGTCGCTTTTGGTCCCCTG+AGG + chr2.4:63814198-63814217 None:intergenic 60.0%
ACGATCTCAGCGGTGACCGG+TGG - chr2.4:63813593-63813612 MS.gene002965:CDS 65.0%
CCACCCCATGATTTCCGGGC+AGG + chr2.4:63811140-63811159 None:intergenic 65.0%
CCTGCCCGGAAATCATGGGG+TGG - chr2.4:63811137-63811156 MS.gene002965:intron 65.0%
CGGCCTGCCCGGAAATCATG+GGG - chr2.4:63811134-63811153 MS.gene002965:intron 65.0%
CTCGGCCTGCCCGGAAATCA+TGG - chr2.4:63811132-63811151 MS.gene002965:intron 65.0%
GCCCGGAAATCATGGGGTGG+TGG - chr2.4:63811140-63811159 MS.gene002965:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 63809510 63814341 63809510 ID=MS.gene002965
chr2.4 mRNA 63809510 63814341 63809510 ID=MS.gene002965.t1;Parent=MS.gene002965
chr2.4 exon 63814107 63814341 63814107 ID=MS.gene002965.t1.exon1;Parent=MS.gene002965.t1
chr2.4 CDS 63814107 63814341 63814107 ID=cds.MS.gene002965.t1;Parent=MS.gene002965.t1
chr2.4 exon 63813806 63813882 63813806 ID=MS.gene002965.t1.exon2;Parent=MS.gene002965.t1
chr2.4 CDS 63813806 63813882 63813806 ID=cds.MS.gene002965.t1;Parent=MS.gene002965.t1
chr2.4 exon 63813578 63813614 63813578 ID=MS.gene002965.t1.exon3;Parent=MS.gene002965.t1
chr2.4 CDS 63813578 63813614 63813578 ID=cds.MS.gene002965.t1;Parent=MS.gene002965.t1
chr2.4 exon 63812070 63812166 63812070 ID=MS.gene002965.t1.exon4;Parent=MS.gene002965.t1
chr2.4 CDS 63812070 63812166 63812070 ID=cds.MS.gene002965.t1;Parent=MS.gene002965.t1
chr2.4 exon 63811777 63811906 63811777 ID=MS.gene002965.t1.exon5;Parent=MS.gene002965.t1
chr2.4 CDS 63811777 63811906 63811777 ID=cds.MS.gene002965.t1;Parent=MS.gene002965.t1
chr2.4 exon 63809510 63809650 63809510 ID=MS.gene002965.t1.exon6;Parent=MS.gene002965.t1
chr2.4 CDS 63809510 63809650 63809510 ID=cds.MS.gene002965.t1;Parent=MS.gene002965.t1
Gene Sequence

>MS.gene002965

ATGTCTTCATCTTCTTCTTCTTCTCCTACTAGCGGAGTTGTGGACACTAACCCTTCACAACCTTCTGATGTGCGAACTTTTCACCGTCGTTTAGATTCTCATCAGACTCCAGAGATGAGTCTAAAAGCACCTGTGGTGAGACCTTATGTTCGATCAAAGTTGCCTCGGCTTCGTTGGACACCAGATCTTCACCGTTGCTTTGTGCATGCAGTTCAAAGGCTTGGAGGAGAAGAGAGTAAGCTACCCTAGTTCTTTTATTCAATATTATATACTTAGATCCTATTTTTTAATTTAAATTTCTCTATATATATATAATAATCACAAGTGATTGATCATGTCTTAAAAAAATCTTGACTTTCAATTGCCATCTACTATTAAAAAAATCATTCCTTTGTTGTTAATTTGACTTGAAAACATTATTTTTGGTTTTAATAATTTATATGTATGCTTGTATTACAGGGGCTACACCAAAGTTAGTTTTACAATTCATGAATATCAAGGGGCTTACCATATCTCATGTCAAAAGCCACCTTCAGGTACTCTTTCTCTTCATCTAAATAATTAACCACTAAAAATGTTTGATTAATAAAAAAAAAAACCATTCTTTCCACCTCTTGCAAGCTAATTACCTTATTTATGTTCGTTTTTTTAAATAAATAAAAATAATAATTTTGTACCAAATTTTTTTTTTTTTTCCTAAAATTTTGAAATTTCAATGTTATTGCAGATGTACAGGAGCATGAAACAAGAGCAGATGATTGAAGGTATTACTAATATTAATTGTGGTGTAGTACTGTTTAATTAAATGCATGTTATCATGTCACGGAAACACATGTATGCATCTTTGTAAATGGAAGAAATAGGTTGATGAAGAATACATTAGACATATTGTTTGGTACAATAGAGGAAATTTTAGATCTGTGAATACATCTATATTTAGTGACACATTATGCGAAGAAAATAATAGAACAAAACAAGAAATAGGTGTACGTAAGCATAACTGGTTGATTCTTTATTCCGTGACCAAGATAGAGAAAAGTAACGTCAAATATTCTTCCAGATTTTGTTCCTAGAAAAATACATCATTTTGTGTTGTACTGCTACTCTACTTTCGTCATATCAGAGTTGTCTCACGCTGAAATTTTTTCCCAAAGAAATTATAGACCTCAATAAAAATAAACGTGGTAGAAGTAGAATTTTTTATTATAGGGAAAAGTTAGAGTGTCCTCAGAACACTTTTTTAAAACTTTAGATGATATGTTTCAAAAAAAAATTTAAACCGTAAGTTTTTATAAAAGTTTGTGTATTTGCTGTATTGGGAATTGAAATATTTGACTTTATTAAAGAATAATTAATTGAAATACTTTGTGTATTTTAACTTTGATGAATATGTTATTTTTATGTAGATATTCAGTTTCATACTTTAGATAAGTCAAGATATTATTTTCTAAAATGTTTACAAAATATCTAAATAGTGAAATTTGATTGGATGTTTGTATAAAATTATTTTACACTATTAGTATTTACAAATTAAAATTTACATATATAAATTAGAGCAATGCTATTTATCAAGAAAGATTTTATCAAGAAATTGTCCCGAAATTAATGTTAGCCAATAAAATCTCGGCCTGCCCGGAAATCATGGGGTGGTGGGTGTTATGTATTTTTTTTTATGAAACTTTAATAAATAAAATTAAAATCTAATGGTAATTATTCTGCCATGTCATTCTTGAATTCATCAAGAAAATCCATTCTTGATATCTAGCATTTTCCTATAAATTATGATGGTTCCTGAAACAGTTTTTTGAATATGTTCCTCAAACAATTTTTGGCGACTTAATCCTATTCCCTATCTATCTGTTGTCATTTAGATTGTTTCTCTTTTTGCTATGTGACGGTTATAATTATACTTTATCAAGTCTTATCCGGTACACCTTGTGCTGATAAGATTTGCTTCAGTTGTTTAACATATTTCTCTTTTTGCCTGTTAAAAAAATATACATTTAGTGCTTGAAACATCTTTACAAATATCCACATTATGATATGTGATTCAATGGATGTAAAATAATTACAATGACAGTCTAACACTGCATGCATACAAATTAAATTCATAATTTATCTTATAACATCAGAATTGTAATAGAGTAATTTGATATAAATTTACATATTTACCAGCTGCAAAGAGAAAGGACATGGCAGCTGATTTATCAGTTTCAGCAATCTCCTCCTCAGCCCTTGTTCCAAGCTACTATCTGAATCATGGCCAAAGAATGTAATTCTCCAAACTTTTTTTTTTATTGTTCCTCTCTTCTTTTATTTACGGTGGCTATAATTCTTTGAACTTTATATTTTGCATTATAATTTCAGAATTTTATCATGCTCTTCTCTTCTTTACAATGCATATAATTTTGGAATTTCTCTCTTAATTATTCCAGGGATGCTTATTGGCTAGAGTCTTTCAATGGAACTCAAGGTAATCAATCAATTGTGATCTGTAATGGGGATGAGCAGAAGATGCACACTTACATCCTCTTTGATGGTATTCTCGGAGGCCAGACTGTTCAAGTACGTAAATCATTCCTCTCAATTAGTCTCTCCTTTCTACATACTAATACTATGTTGGGATAATATATATTTTTTTAGGAGTTTTTTAGTGCTTGTTTACTTTGTTGATATAAAATATTTATATAAACTACTTTGAGGATCCGAATTCCACTTCTTTCTATCACCAACACACAAACACACTTTTTTTTTTTTGAAAATCGTTGTATCCTACAATTTTGTTGACCAACAATAGGTCAGACCCGACTTTGATAGGTCCGAGCCTGACCTACAAAATTTTTGTAAGTTTGAGTATGACTTATGACCTTTTGTAAGCTTTTTTTTTTGGTCCAGTCTATTTAAAAGTCTGATTAAACCTGAAAGTCTATTTACATGTTTATTTCATATTAAAGTCGTTAAATAATCTAATTTATCAACTTCTAAATAGACTCAACAAGCCTTAAAGTCTATTTCACGAAGGCTTACCTATCACCGTAAATGTCTATTTCACTTTAAGGCCTTAAAGCCTATTTAAATAGTCCTTTATTTGAGTTGTTACTTGATTTTTATGTTAAATATAAATTCTATTTTGATAAAAGTAAAAATAAGTTTTAATAAAATGCATAAGCATGTCACCGTATCAAGCTTCGTATGCTTTTTTGATAATCTAAGCCCGAGCTATTAACTTAAATAAGTTTTTTTTTTTAAAGTCTAAACCTTGCCTTATTAATAAACAGGCAAGCCGTAGACACTTATAGGCCCGTATGACCTATTCCCGCCCTTAACCAACATTCAATCATTTAATAACATGTTTTGTATTTACTTATTATGAAGATAATTTTTAAATTTTGAATTGATTTTGTCTTCGGAGGACAATTTTTTTTCTTTCTTTCTTTCTATTTTTGAACCATACATATTAATTATCACTAGTGTGTTATTTATTTATTTATAATGTGTGTTGTGTTAGTGTGGTGTTGAATGTGTGACATCTAGGGGTGTAACGGTTCGGTTTGGATTGGTTTTTAGTCAAAAAAATGTCCGAACCGATGAACTCTTCATCGGTTTGGATTGGTTCGGTTTTCACTGTTTTTCAAAAAAGAAACCGAACCAAACTAATCGGTTTGGTTCGGTTTGGATTGGTTCGGTTGCTCGGTTTGTTTAAAAATACAACTAAAAAAAATAAATCATATTCTCACAAAACATTTCTTAGAACTTTGTATAATTGTATTTCATATTTTGTTTTTTTTTTTTTTCATGTTCTCCATTTTTCAAACAACTTTTTATAACTAACCTTACTCAATATTTCATACACATGATCCAAGATTCATTCATCCATCATTCTTCAAAAACAACTTCATCAAACTCAAATATTTCAATCATCCATGATCCATACATGCATCATTCATCAATAAACACAAAAATTCCAAAAAGAACATGGAAAACGTGTATAAATCAATGGCATAGAAAATGAACATGGAAAACAATGAAGTATAATGAGTATAAATCAATGTCATAAACATGATAAAACTAACTAAGAGATGAACGATCTCAGCGGTGACCGGTGGCGATGAACAATGAGTTGACAGCTAGGGTTTCTTTTTTAGTAGAAATGAAAGAGTTGAGATGAGATGAAGATGATGATGAGAGAAAGTGAATGGATTAAAAAGTATTTTATGTTGGATTTTAATTTTGGGCCTAACATAAGTTTGTGTGAGGTAGGATAATATTAGTAAAATAAGGAGTGTGGTTATCATCGGATTGGTTCATCGGTTTCACGGATCTCGAAATGAAAAACCATGAACCAAACCAAACTAGATCGGTTTTGATTGGTTCGGATCGGTTTCAAACCGAACCAAACAAGGTCGGATATTATTTTGGTTTGGTTCGGTTTGGACTTTCGGTTTCGTTGATTTTGTCCAAACCACTTACACCCCTAGTGACATCAAATATTACTATAATATTCCGTTTAACATATTTGCTCTTATTTGGTCCAATAAAATATATTTTCCCTTATTGATTAAAATTTATTTCAAATTGATTGCACTAAATTATATTGACCTTACATTCATTTGATGGGGTCAATTGAGTGAAAGTGTGTGTGTGTAAGAAATGCTACAAAACAATAATATTCATTCCGTTTTGCTCCTCAGGGGACCAAAAGCGACCAACAAAGATTCGAAGATATAACCAGGAGAGGAGAGAGAGTGAATGAAGACACAGTTCTGTCCCCATCAACAAGCTCAGGAGGTCCAGACACAAATGATGTCTCTCTTGAGCTCAAATTCAACTGA
Protein sequence

>MS.gene002965.t1

MSSSSSSSPTSGVVDTNPSQPSDVRTFHRRLDSHQTPEMSLKAPVVRPYVRSKLPRLRWTPDLHRCFVHAVQRLGGEERATPKLVLQFMNIKGLTISHVKSHLQMYRSMKQEQMIEAAKRKDMAADLSVSAISSSALVPSYYLNHGQRMDAYWLESFNGTQGNQSIVICNGDEQKMHTYILFDGILGGQTVQGTKSDQQRFEDITRRGERVNEDTVLSPSTSSGGPDTNDVSLELKFN