AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene002992

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002992.t1 MTR_2g023930 96.270 563 11 3 1 563 1 553 0.0 1108
MS.gene002992.t1 MTR_4g132430 54.433 485 150 20 59 524 27 459 6.42e-139 412
MS.gene002992.t1 MTR_2g088000 47.177 549 195 19 62 556 81 588 3.06e-126 383
MS.gene002992.t1 MTR_4g132430 57.258 372 101 14 164 524 1 325 1.28e-114 345
MS.gene002992.t1 MTR_3g053330 43.478 483 196 14 60 535 32 444 1.40e-108 333
MS.gene002992.t1 MTR_4g049790 39.250 507 230 16 67 542 60 519 3.64e-94 299
MS.gene002992.t1 MTR_4g049760 40.643 529 225 15 67 550 35 519 7.38e-94 298
MS.gene002992.t1 MTR_4g047580 38.780 508 240 18 67 542 30 498 1.22e-89 286
MS.gene002992.t1 MTR_7g110720 41.309 489 170 16 67 545 30 411 4.99e-86 273
MS.gene002992.t1 MTR_7g110720 52.536 276 76 7 276 545 158 384 3.65e-73 239
MS.gene002992.t1 MTR_2g045360 33.967 421 183 14 143 541 68 415 8.17e-56 194
MS.gene002992.t1 MTR_7g009730 33.043 460 222 14 150 541 47 488 4.75e-55 196
MS.gene002992.t1 MTR_4g107970 36.667 480 226 16 143 555 70 538 5.47e-46 171
MS.gene002992.t1 MTR_4g094412 38.415 328 167 10 76 388 8 315 1.07e-45 167
MS.gene002992.t1 MTR_4g107970 37.554 466 213 16 157 555 7 461 1.42e-45 169
MS.gene002992.t1 MTR_4g094412 38.415 328 167 10 76 388 17 324 1.66e-45 167
MS.gene002992.t1 MTR_6g038890 53.548 155 44 7 185 337 90 218 1.13e-36 136
MS.gene002992.t1 MTR_5g044695 90.476 63 6 0 275 337 45 107 3.15e-35 128
MS.gene002992.t1 MTR_1g013760 33.191 235 110 5 150 383 28 216 1.79e-28 115
MS.gene002992.t1 MTR_4g007060 38.816 152 69 4 282 433 103 230 3.08e-27 111
MS.gene002992.t1 MTR_4g007060 38.816 152 69 4 282 433 137 264 4.09e-27 112
MS.gene002992.t1 MTR_3g056100 30.877 285 142 10 112 369 220 476 3.68e-25 110
MS.gene002992.t1 MTR_3g056100 30.877 285 142 10 112 369 76 332 5.25e-25 108
MS.gene002992.t1 MTR_5g094430 55.000 80 35 1 290 369 213 291 6.78e-25 107
MS.gene002992.t1 MTR_5g094430 55.000 80 35 1 290 369 235 313 7.38e-25 107
MS.gene002992.t1 MTR_3g056100 32.000 275 139 11 112 369 220 463 1.35e-24 108
MS.gene002992.t1 MTR_3g056100 32.000 275 139 11 112 369 76 319 2.02e-24 106
MS.gene002992.t1 MTR_5g094430 55.000 80 35 1 290 369 347 425 2.42e-24 107
MS.gene002992.t1 MTR_7g011820 35.294 170 104 3 217 382 317 484 2.63e-24 107
MS.gene002992.t1 MTR_1g013790 45.918 98 51 1 302 397 96 193 2.67e-24 102
MS.gene002992.t1 MTR_3g106060 50.588 85 42 0 292 376 123 207 3.15e-24 103
MS.gene002992.t1 MTR_3g009470 50.000 90 44 1 280 369 468 556 1.64e-23 105
MS.gene002992.t1 MTR_3g009470 44.086 93 50 2 276 368 249 339 1.31e-16 83.6
MS.gene002992.t1 MTR_7g109800 48.421 95 44 2 291 385 129 218 1.81e-23 101
MS.gene002992.t1 MTR_3g031220 53.165 79 36 1 289 367 347 424 2.59e-23 103
MS.gene002992.t1 MTR_3g031220 30.872 149 70 4 221 369 143 258 3.01e-11 66.2
MS.gene002992.t1 MTR_4g013260 53.165 79 36 1 289 367 318 395 2.92e-23 103
MS.gene002992.t1 MTR_4g013260 42.667 75 40 2 293 367 172 243 2.83e-14 75.9
MS.gene002992.t1 MTR_7g071120 52.326 86 40 1 284 369 301 385 5.11e-23 102
MS.gene002992.t1 MTR_5g074400 53.086 81 37 1 289 369 402 481 5.14e-23 103
MS.gene002992.t1 MTR_5g074400 51.667 60 27 2 308 367 244 301 1.63e-13 73.6
MS.gene002992.t1 MTR_3g104750 50.000 76 37 1 290 365 87 161 7.28e-23 95.9
MS.gene002992.t1 MTR_5g042920 45.918 98 52 1 289 386 302 398 2.27e-22 100
MS.gene002992.t1 MTR_5g042920 39.583 96 56 2 308 403 152 245 4.57e-13 71.6
MS.gene002992.t1 MTR_2g105060 51.190 84 36 2 289 367 71 154 3.41e-22 96.3
MS.gene002992.t1 MTR_2g105060 51.190 84 36 2 289 367 146 229 3.52e-22 97.8
MS.gene002992.t1 MTR_5g097490 45.631 103 49 3 282 379 222 322 3.55e-22 99.4
MS.gene002992.t1 MTR_5g097490 41.250 80 45 2 305 384 90 167 2.72e-11 65.9
MS.gene002992.t1 MTR_4g082580 47.368 95 46 2 289 380 260 353 5.11e-22 98.6
MS.gene002992.t1 MTR_4g094588 45.055 91 49 1 294 384 165 254 5.59e-22 97.8
MS.gene002992.t1 MTR_1g015140 42.424 99 55 2 267 365 63 159 7.05e-22 92.8
MS.gene002992.t1 MTR_2g033820 44.348 115 53 4 291 401 187 294 7.35e-22 98.2
MS.gene002992.t1 MTR_7g080020 52.500 80 37 1 290 369 476 554 7.57e-22 100
MS.gene002992.t1 MTR_7g080020 50.000 60 28 2 308 367 281 338 2.07e-11 67.4
MS.gene002992.t1 MTR_7g028415 53.521 71 32 1 296 366 82 151 7.69e-22 93.2
MS.gene002992.t1 MTR_7g028710 53.521 71 32 1 296 366 82 151 7.69e-22 93.2
MS.gene002992.t1 MTR_7g080000 52.500 80 37 1 290 369 415 493 1.27e-21 99.8
MS.gene002992.t1 MTR_7g080000 47.692 65 32 2 303 367 230 292 1.19e-11 68.2
MS.gene002992.t1 MTR_7g079010 35.260 173 98 5 195 365 38 198 1.95e-21 93.6
MS.gene002992.t1 MTR_1g086790 43.269 104 57 2 291 393 142 244 7.45e-21 94.4
MS.gene002992.t1 MTR_7g100510 41.837 98 56 1 270 367 324 420 1.89e-20 94.7
MS.gene002992.t1 MTR_7g100510 43.902 82 40 3 308 389 190 265 2.51e-12 69.3
MS.gene002992.t1 MTR_7g109600 45.361 97 44 2 290 380 30 123 2.38e-20 91.7
MS.gene002992.t1 MTR_8g092010 45.946 74 39 1 294 367 95 167 4.70e-20 88.6
MS.gene002992.t1 MTR_5g043880 50.000 78 38 1 287 364 104 180 8.33e-20 90.1
MS.gene002992.t1 MTR_4g122530 47.619 84 42 2 291 374 192 273 1.39e-19 91.7
MS.gene002992.t1 MTR_5g091390 50.000 74 36 1 294 367 144 216 3.18e-19 89.0
MS.gene002992.t1 MTR_4g130900 49.367 79 37 2 291 367 343 420 4.40e-19 90.9
MS.gene002992.t1 MTR_1g009613 48.649 74 38 0 291 364 246 319 5.31e-19 89.0
MS.gene002992.t1 MTR_5g016610 50.000 76 38 0 291 366 183 258 6.49e-19 87.4
MS.gene002992.t1 MTR_8g087000 59.016 61 25 0 307 367 77 137 7.68e-19 86.7
MS.gene002992.t1 MTR_8g087000 59.016 61 25 0 307 367 76 136 8.86e-19 86.3
MS.gene002992.t1 MTR_8g007270 48.000 75 38 1 290 364 137 210 8.95e-19 85.9
MS.gene002992.t1 MTR_4g094908 49.367 79 40 0 291 369 250 328 9.65e-19 88.2
MS.gene002992.t1 MTR_2g032030 51.316 76 37 0 307 382 267 342 1.74e-18 89.0
MS.gene002992.t1 MTR_1g070455 46.429 84 45 0 291 374 277 360 2.20e-18 87.4
MS.gene002992.t1 MTR_2g016770 56.452 62 27 0 307 368 35 96 2.75e-18 84.3
MS.gene002992.t1 MTR_2g083870 54.286 70 32 0 298 367 71 140 3.59e-18 85.1
MS.gene002992.t1 MTR_2g032030 51.316 76 37 0 307 382 267 342 3.65e-18 87.4
MS.gene002992.t1 MTR_3g095080 46.667 75 39 1 290 364 151 224 3.72e-18 84.7
MS.gene002992.t1 MTR_2g016770 56.452 62 27 0 307 368 27 88 3.89e-18 83.6
MS.gene002992.t1 MTR_3g095080 46.667 75 39 1 290 364 127 200 4.21e-18 84.0
MS.gene002992.t1 MTR_3g095040 47.297 74 38 1 294 367 105 177 6.55e-18 82.8
MS.gene002992.t1 MTR_0117s0040 45.652 92 47 1 273 364 43 131 8.89e-18 83.6
MS.gene002992.t1 MTR_8g096730 45.570 79 42 1 292 370 55 132 9.56e-18 80.9
MS.gene002992.t1 MTR_2g024350 34.074 135 79 3 302 426 3 137 1.87e-17 82.0
MS.gene002992.t1 MTR_4g127040 50.000 74 37 0 291 364 229 302 1.98e-17 84.0
MS.gene002992.t1 MTR_7g079040 50.000 74 37 0 304 377 151 224 2.13e-17 84.0
MS.gene002992.t1 MTR_1g077780 43.478 92 50 2 291 382 46 135 2.68e-17 79.3
MS.gene002992.t1 MTR_3g009470 44.086 93 50 2 276 368 249 339 6.32e-17 84.3
MS.gene002992.t1 MTR_8g092140 46.053 76 39 2 290 364 142 216 9.41e-17 80.1
MS.gene002992.t1 MTR_8g028565 49.296 71 36 0 307 377 155 225 1.03e-16 82.0
MS.gene002992.t1 MTR_3g108960 47.297 74 39 0 291 364 298 371 1.06e-16 82.8
MS.gene002992.t1 MTR_8g098945 44.444 72 40 0 306 377 128 199 1.48e-15 77.4
MS.gene002992.t1 MTR_2g024380 45.455 66 36 0 302 367 246 311 1.71e-15 79.7
MS.gene002992.t1 MTR_1g099600 45.205 73 40 0 305 377 183 255 4.44e-15 76.6
MS.gene002992.t1 MTR_4g007060 42.857 63 36 0 282 344 137 199 1.52e-14 73.9
MS.gene002992.t1 MTR_7g062220 37.190 121 59 3 267 372 70 188 1.90e-14 75.1
MS.gene002992.t1 MTR_6g086555 46.667 75 38 2 294 367 193 266 2.63e-14 75.5
MS.gene002992.t1 MTR_1g078260 43.056 72 39 2 294 364 234 304 3.09e-13 72.4
MS.gene002992.t1 MTR_3g090860 47.368 76 33 2 294 362 115 190 5.08e-13 70.9
MS.gene002992.t1 MTR_5g067680 42.529 87 38 2 308 382 203 289 8.15e-13 70.5
MS.gene002992.t1 MTR_8g027860 49.275 69 28 2 306 367 135 203 5.58e-12 67.8
MS.gene002992.t1 MTR_3g031220 30.872 149 70 4 221 369 143 258 1.50e-11 66.6
MS.gene002992.t1 MTR_5g044695 42.735 117 43 6 192 306 8 102 1.91e-11 61.2
MS.gene002992.t1 MTR_6g053200 31.373 102 68 2 268 367 289 390 6.26e-11 65.5
MS.gene002992.t1 MTR_8g069935 31.461 89 49 1 291 367 303 391 6.47e-11 65.1
MS.gene002992.t1 MTR_7g073380 35.294 102 63 2 288 386 103 204 9.76e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002992.t1 AT1G62300 50.825 606 182 30 1 544 1 552 3.23e-152 448
MS.gene002992.t1 AT4G04450 52.299 522 158 23 62 535 25 503 9.33e-141 418
MS.gene002992.t1 AT4G04450 55.088 452 119 21 125 535 1 409 8.54e-129 384
MS.gene002992.t1 AT4G22070 52.990 485 167 19 43 479 1 472 3.89e-120 365
MS.gene002992.t1 AT4G22070 52.990 485 167 19 43 479 1 472 3.89e-120 365
MS.gene002992.t1 AT4G22070 52.990 485 167 19 43 479 1 472 3.89e-120 365
MS.gene002992.t1 AT4G22070 52.990 485 167 19 43 479 1 472 3.89e-120 365
MS.gene002992.t1 AT4G01720 42.032 433 179 15 110 532 73 443 5.02e-64 218
MS.gene002992.t1 AT5G15130 34.389 442 230 12 143 536 35 464 5.18e-50 181
MS.gene002992.t1 AT1G68150 40.711 253 108 8 146 388 96 316 6.28e-49 174
MS.gene002992.t1 AT5G15130 34.332 434 225 12 151 536 1 422 2.16e-48 176
MS.gene002992.t1 AT1G18860 32.365 482 250 12 132 537 30 511 1.42e-43 163
MS.gene002992.t1 AT1G69810 33.846 325 191 8 128 437 14 329 1.36e-41 154
MS.gene002992.t1 AT1G69810 53.691 149 63 3 290 437 128 271 5.47e-37 140
MS.gene002992.t1 AT4G31800 34.156 243 123 5 145 385 47 254 1.26e-31 125
MS.gene002992.t1 AT1G80840 31.641 256 114 7 116 367 8 206 4.32e-29 117
MS.gene002992.t1 AT4G31800 50.505 99 44 2 292 385 91 189 6.00e-25 104
MS.gene002992.t1 AT2G38470 49.451 91 45 1 289 379 344 433 8.11e-25 108
MS.gene002992.t1 AT2G38470 51.667 60 27 2 308 367 185 242 2.51e-13 73.2
MS.gene002992.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.21e-24 104
MS.gene002992.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.20e-13 71.2
MS.gene002992.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.21e-24 104
MS.gene002992.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.20e-13 71.2
MS.gene002992.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.21e-24 104
MS.gene002992.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.20e-13 71.2
MS.gene002992.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.21e-24 104
MS.gene002992.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.20e-13 71.2
MS.gene002992.t1 AT2G25000 48.864 88 45 0 285 372 81 168 1.09e-23 100
MS.gene002992.t1 AT2G25000 48.864 88 45 0 285 372 81 168 1.09e-23 100
MS.gene002992.t1 AT2G25000 46.237 93 50 0 280 372 98 190 1.33e-23 100
MS.gene002992.t1 AT4G26640 53.846 78 35 1 290 367 292 368 1.56e-23 104
MS.gene002992.t1 AT4G26640 37.363 91 55 2 277 367 109 197 6.92e-13 71.6
MS.gene002992.t1 AT4G26640 53.846 78 35 1 290 367 324 400 1.60e-23 104
MS.gene002992.t1 AT4G26640 37.363 91 55 2 277 367 141 229 6.74e-13 71.6
MS.gene002992.t1 AT1G29860 36.774 155 86 4 248 396 82 230 1.77e-23 100
MS.gene002992.t1 AT4G26640 53.846 78 35 1 290 367 364 440 2.08e-23 104
MS.gene002992.t1 AT4G26640 37.363 91 55 2 277 367 181 269 6.87e-13 71.6
MS.gene002992.t1 AT2G25000 48.864 88 45 0 285 372 124 211 2.16e-23 100
MS.gene002992.t1 AT1G13960 53.571 84 38 1 284 367 233 315 2.22e-23 102
MS.gene002992.t1 AT1G13960 51.667 60 27 2 308 367 77 134 1.97e-12 69.3
MS.gene002992.t1 AT1G13960 53.571 84 38 1 284 367 386 468 2.78e-23 103
MS.gene002992.t1 AT1G13960 51.667 60 27 2 308 367 230 287 1.41e-12 70.5
MS.gene002992.t1 AT5G26170 51.389 72 34 1 293 364 99 169 4.13e-23 97.1
MS.gene002992.t1 AT5G56270 49.438 89 44 1 281 369 461 548 5.43e-23 103
MS.gene002992.t1 AT5G56270 50.820 61 28 2 308 368 274 332 5.72e-12 68.9
MS.gene002992.t1 AT5G49520 51.948 77 36 1 291 367 205 280 8.87e-23 101
MS.gene002992.t1 AT4G18170 48.913 92 45 2 277 367 141 231 9.56e-23 99.8
MS.gene002992.t1 AT2G03340 51.163 86 41 1 284 369 392 476 1.82e-22 101
MS.gene002992.t1 AT2G03340 51.667 60 27 2 308 367 251 308 5.13e-13 72.0
MS.gene002992.t1 AT5G07100 47.126 87 45 1 281 367 115 200 2.63e-22 95.9
MS.gene002992.t1 AT5G07100 41.096 73 42 1 308 380 25 96 1.88e-11 64.3
MS.gene002992.t1 AT5G07100 47.126 87 45 1 281 367 115 200 2.63e-22 95.9
MS.gene002992.t1 AT5G07100 41.096 73 42 1 308 380 25 96 1.88e-11 64.3
MS.gene002992.t1 AT5G07100 47.126 87 45 1 281 367 115 200 2.63e-22 95.9
MS.gene002992.t1 AT5G07100 41.096 73 42 1 308 380 25 96 1.88e-11 64.3
MS.gene002992.t1 AT5G07100 47.126 87 45 1 281 367 115 200 2.63e-22 95.9
MS.gene002992.t1 AT5G07100 41.096 73 42 1 308 380 25 96 1.88e-11 64.3
MS.gene002992.t1 AT2G04880 44.828 87 47 1 286 372 262 347 3.42e-22 100
MS.gene002992.t1 AT2G04880 46.970 66 33 2 305 370 109 172 2.83e-12 69.3
MS.gene002992.t1 AT2G04880 44.828 87 47 1 286 372 286 371 4.46e-22 100
MS.gene002992.t1 AT2G04880 46.970 66 33 2 305 370 109 172 3.48e-12 69.3
MS.gene002992.t1 AT5G07100 47.126 87 45 1 281 367 208 293 4.76e-22 97.4
MS.gene002992.t1 AT5G07100 41.096 73 42 1 308 380 118 189 3.53e-11 65.1
MS.gene002992.t1 AT1G64000 48.235 85 43 1 281 365 88 171 5.48e-22 94.4
MS.gene002992.t1 AT5G41570 53.750 80 35 2 287 365 77 155 6.07e-22 94.0
MS.gene002992.t1 AT5G46350 48.864 88 43 2 294 380 170 256 1.05e-21 96.7
MS.gene002992.t1 AT3G01080 47.619 84 43 1 284 367 283 365 3.67e-21 96.7
MS.gene002992.t1 AT3G01080 51.667 60 27 2 308 367 168 225 2.20e-11 66.6
MS.gene002992.t1 AT3G01080 47.619 84 43 1 284 367 321 403 3.83e-21 97.1
MS.gene002992.t1 AT3G01080 51.667 60 27 2 308 367 206 263 2.02e-11 66.6
MS.gene002992.t1 AT2G30250 51.250 80 38 1 290 369 311 389 5.81e-21 95.5
MS.gene002992.t1 AT2G47260 43.243 111 58 2 283 389 150 259 6.60e-21 94.7
MS.gene002992.t1 AT2G46130 48.780 82 41 1 284 365 7 87 1.27e-20 87.8
MS.gene002992.t1 AT1G55600 44.444 90 49 1 280 369 280 368 1.48e-20 95.5
MS.gene002992.t1 AT5G13080 43.000 100 56 1 267 366 27 125 1.73e-20 88.6
MS.gene002992.t1 AT4G30935 44.554 101 45 3 291 383 315 412 3.48e-20 94.0
MS.gene002992.t1 AT4G26440 45.545 101 52 2 291 391 356 453 5.33e-20 94.0
MS.gene002992.t1 AT2G30590 50.000 82 40 1 291 371 297 378 9.96e-20 91.7
MS.gene002992.t1 AT1G29280 51.429 70 34 0 298 367 65 134 1.22e-19 89.4
MS.gene002992.t1 AT3G01970 43.137 102 57 1 263 364 21 121 1.35e-19 85.9
MS.gene002992.t1 AT4G31800 31.683 202 101 5 145 344 47 213 1.80e-19 88.2
MS.gene002992.t1 AT1G69310 42.353 85 48 1 280 364 120 203 1.92e-19 89.4
MS.gene002992.t1 AT1G69310 42.353 85 48 1 280 364 120 203 1.92e-19 89.4
MS.gene002992.t1 AT1G69310 42.353 85 48 1 280 364 120 203 1.92e-19 89.4
MS.gene002992.t1 AT2G44745 40.909 88 51 1 277 364 115 201 2.52e-19 87.4
MS.gene002992.t1 AT2G23320 57.627 59 25 0 308 366 241 299 4.28e-19 89.0
MS.gene002992.t1 AT5G64810 47.887 71 36 1 294 364 97 166 4.70e-19 85.9
MS.gene002992.t1 AT4G24240 50.000 76 38 0 291 366 265 340 1.11e-18 88.2
MS.gene002992.t1 AT3G62340 50.000 78 38 1 294 371 105 181 1.19e-18 86.7
MS.gene002992.t1 AT5G28650 48.649 74 38 0 291 364 246 319 1.94e-18 87.0
MS.gene002992.t1 AT3G58710 52.857 70 33 0 298 367 62 131 2.38e-18 85.9
MS.gene002992.t1 AT3G58710 52.857 70 33 0 298 367 61 130 2.41e-18 85.9
MS.gene002992.t1 AT4G39410 43.902 82 45 1 283 364 199 279 2.70e-18 86.3
MS.gene002992.t1 AT2G34830 48.193 83 42 1 293 374 200 282 9.09e-18 86.3
MS.gene002992.t1 AT3G04670 47.297 74 39 0 291 364 246 319 1.14e-17 84.7
MS.gene002992.t1 AT1G30650 48.193 83 42 1 293 374 202 284 1.17e-17 85.9
MS.gene002992.t1 AT2G34830 48.193 83 42 1 293 374 209 291 1.17e-17 86.3
MS.gene002992.t1 AT2G24570 48.649 74 38 0 291 364 227 300 1.23e-17 84.7
MS.gene002992.t1 AT4G23550 45.679 81 44 0 302 382 135 215 1.95e-17 84.0
MS.gene002992.t1 AT4G31550 47.297 74 39 0 291 364 230 303 2.38e-17 84.0
MS.gene002992.t1 AT4G31550 47.297 74 39 0 291 364 229 302 2.51e-17 83.6
MS.gene002992.t1 AT4G01250 49.296 71 36 0 307 377 128 198 3.37e-17 82.8
MS.gene002992.t1 AT2G37260 49.333 75 34 2 302 373 262 335 6.94e-17 82.8
MS.gene002992.t1 AT2G37260 42.105 76 42 2 308 383 84 157 8.59e-14 73.6
MS.gene002992.t1 AT2G37260 49.333 75 34 2 302 373 264 337 7.15e-17 82.8
MS.gene002992.t1 AT2G37260 42.105 76 42 2 308 383 86 159 8.57e-14 73.6
MS.gene002992.t1 AT5G52830 46.753 77 41 0 301 377 159 235 1.11e-16 82.0
MS.gene002992.t1 AT2G37260 49.333 75 34 2 302 373 344 417 1.42e-16 82.8
MS.gene002992.t1 AT2G37260 42.105 76 42 2 308 383 166 239 1.40e-13 73.6
MS.gene002992.t1 AT2G46130 45.122 82 40 2 284 365 7 83 9.71e-16 73.6
MS.gene002992.t1 AT1G69310 38.824 85 47 2 280 364 120 199 1.65e-14 74.7
MS.gene002992.t1 AT5G45050 54.098 61 28 0 307 367 1180 1240 3.13e-14 76.6
MS.gene002992.t1 AT5G45050 50.000 76 36 1 292 367 1028 1101 3.14e-14 76.6
MS.gene002992.t1 AT5G45050 54.098 61 28 0 307 367 1152 1212 3.34e-14 76.6
MS.gene002992.t1 AT2G21900 43.939 66 36 1 302 367 104 168 5.78e-14 71.2
MS.gene002992.t1 AT5G45260 39.216 102 55 3 283 382 1189 1285 2.78e-13 73.6
MS.gene002992.t1 AT5G43290 41.667 72 40 2 294 364 100 170 3.85e-13 70.5
MS.gene002992.t1 AT2G46400 41.772 79 44 1 286 362 83 161 9.19e-12 66.6
MS.gene002992.t1 AT3G01080 51.667 60 27 2 308 367 206 263 9.38e-12 67.0
MS.gene002992.t1 AT2G40740 47.297 74 34 2 308 376 174 247 2.89e-11 65.1
MS.gene002992.t1 AT2G40740 47.297 74 34 2 308 376 183 256 4.21e-11 64.7

Find 108 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCCTTGTGTTTCTGATTC+TGG 0.066609 2.2:-62003564 None:intergenic
ATAGCTCTTGCTAATAAATT+TGG 0.198143 2.2:-62004298 None:intergenic
CTTTGAAATTGCAATGGATT+TGG 0.199677 2.2:-62004406 None:intergenic
GCCGCTATCTCCTCCATTAT+TGG 0.262486 2.2:+62004691 MS.gene002992:CDS
GCAAGGACAGCGGTGAAATT+AGG 0.271953 2.2:-62004667 None:intergenic
TTGACAGGAAATCCTAAAAT+AGG 0.296916 2.2:-62002303 None:intergenic
TTTGAAATTGCAATGGATTT+GGG 0.309204 2.2:-62004405 None:intergenic
TGAGAGTGAGATATTGGAAT+TGG 0.324537 2.2:-62002225 None:intergenic
AAAGGGTGAGAGTGAGATAT+TGG 0.336997 2.2:-62002231 None:intergenic
GGATGCCAATGGAGGAAATA+TGG 0.352069 2.2:+62003814 MS.gene002992:CDS
CGCCGTTGGTGTTACGGGTA+AGG 0.353888 2.2:-62002326 None:intergenic
TAAATCCAATATCATCAAAA+AGG 0.354383 2.2:+62002440 MS.gene002992:CDS
GTCTTCGCCGTTGGTGTTAC+GGG 0.361102 2.2:-62002331 None:intergenic
TGCATGGCCACCACCAATAA+TGG 0.361861 2.2:-62004704 None:intergenic
CTTGAGATAGGTACTACTAA+TGG 0.365396 2.2:+62003432 MS.gene002992:CDS
CGTCTTCGCCGTTGGTGTTA+CGG 0.365794 2.2:-62002332 None:intergenic
CAAGTACCTAGTTTCTTTCA+AGG 0.368680 2.2:+62004451 MS.gene002992:CDS
AGGAATAGCAATGGTAAAAC+TGG 0.382516 2.2:+62003528 MS.gene002992:CDS
CTGCAAAGCCGTGTAATTAC+CGG 0.385725 2.2:-62002936 None:intergenic
AAACTCACTTGTTTGCGAAC+TGG 0.388176 2.2:-62003904 None:intergenic
TTTGTCCATATTTCCTCCAT+TGG 0.390389 2.2:-62003819 None:intergenic
TACTACAGATTGATCACTTC+CGG 0.396054 2.2:-62002649 None:intergenic
AAACTAGGTACTTGATGAAA+TGG 0.398773 2.2:-62004442 None:intergenic
CTTCAATTGTCTCAAGAAGT+TGG 0.400880 2.2:+62004535 MS.gene002992:CDS
CCAAGACAATTTCTTGAGAT+AGG 0.405230 2.2:+62003420 MS.gene002992:CDS
GCAGCAAGCATGTTACTATC+AGG 0.425873 2.2:+62004244 MS.gene002992:CDS
GCCATAGCTGCTGGTGGTAA+TGG 0.452891 2.2:-62004199 None:intergenic
CTATAGTATGCTCGAGGACA+TGG 0.465899 2.2:-62003859 None:intergenic
GAGATGCTAAGTCATGTTAC+CGG 0.472299 2.2:+62002917 MS.gene002992:CDS
AGCATACTATAGATGCACTA+TGG 0.487105 2.2:+62003870 MS.gene002992:CDS
ATCTCCTCCATTATTGGTGG+TGG 0.487542 2.2:+62004697 MS.gene002992:CDS
ACGGCGAAGACGGCGGTGAC+CGG 0.490027 2.2:+62002343 MS.gene002992:CDS
TATATTATATGGACAAAGCA+TGG 0.490606 2.2:+62002172 None:intergenic
GTGTTACGGGTAAGGTTGAC+AGG 0.491562 2.2:-62002318 None:intergenic
ATTTGCTTGATCTGCAACAT+TGG 0.493278 2.2:-62003622 None:intergenic
TGCTAGATCAGAAGCTTCAA+TGG 0.495447 2.2:+62003683 MS.gene002992:CDS
TGTTGTTGCTATTGTTTGCA+TGG 0.495497 2.2:-62004720 None:intergenic
TGCCGAGGACAAAACAATCT+TGG 0.496599 2.2:+62004147 MS.gene002992:CDS
AGAGAAGAAATCGACTTCAC+TGG 0.503654 2.2:-62002373 None:intergenic
TGTTGGTTGTGTTCATTTGA+AGG 0.504024 2.2:-62002414 None:intergenic
CAGAATCAGAAACACAAGGC+TGG 0.504762 2.2:+62003565 MS.gene002992:CDS
ATTACGTACCTCAGTAGTCT+TGG 0.513802 2.2:-62002709 None:intergenic
AATAGGAAACATTCTATCGT+TGG 0.514918 2.2:-62002286 None:intergenic
AGAATCAGAAACACAAGGCT+GGG 0.517077 2.2:+62003566 MS.gene002992:CDS
CCATTGCTATTCCTCATCTG+AGG 0.520104 2.2:-62003519 None:intergenic
GTGAGATCTAATGTAACAGT+AGG 0.521520 2.2:-62004370 None:intergenic
ATATTATATGGACAAAGCAT+GGG 0.526634 2.2:+62002173 None:intergenic
GATCAATCTGTAGTAGATGA+TGG 0.527093 2.2:+62002657 MS.gene002992:CDS
AATTGCAAGTGGAGCTTCAA+CGG 0.528483 2.2:+62002867 MS.gene002992:CDS
GTCACCGCCGTCTTCGCCGT+TGG 0.533790 2.2:-62002340 None:intergenic
GGATCAATGTCAAGTGCAGA+TGG 0.534800 2.2:+62004265 MS.gene002992:CDS
ATAGCAATGGTAAAACTGGT+AGG 0.540414 2.2:+62003532 MS.gene002992:CDS
ATCTTGGTAACAACATATGA+AGG 0.541003 2.2:+62004163 MS.gene002992:CDS
TCCATTACCACCAGCAGCTA+TGG 0.541740 2.2:+62004198 MS.gene002992:CDS
CGTAACACCAACGGCGAAGA+CGG 0.544973 2.2:+62002333 MS.gene002992:CDS
GATGCCATTGCCATAGCTGC+TGG 0.545474 2.2:-62004208 None:intergenic
CCAAGGTGTTGGTGGAGCAA+TGG 0.549924 2.2:+62003395 MS.gene002992:CDS
AGCGGTGATAGCAGCAGTGG+CGG 0.552835 2.2:-62004641 None:intergenic
GAATCACCACACTGAAAATG+AGG 0.553361 2.2:+62002985 MS.gene002992:CDS
TGATATTGGATTTAACATGT+TGG 0.558451 2.2:-62002431 None:intergenic
CCATTGCTCCACCAACACCT+TGG 0.560146 2.2:-62003395 None:intergenic
TCTACCTTGTTCAACAAGCA+TGG 0.561460 2.2:+62004321 MS.gene002992:CDS
ATTAACATGGATATTAGAAG+TGG 0.561723 2.2:-62002490 None:intergenic
CCTATCTCAAGAAATTGTCT+TGG 0.566117 2.2:-62003420 None:intergenic
TCAGCTTGCACAATTGCAAG+TGG 0.569056 2.2:+62002856 MS.gene002992:intron
TCATGTTACCGGTAATTACA+CGG 0.577854 2.2:+62002928 MS.gene002992:CDS
GCTATCTCCTCCATTATTGG+TGG 0.578002 2.2:+62004694 MS.gene002992:CDS
ACCAATAATGGAGGAGATAG+CGG 0.580718 2.2:-62004692 None:intergenic
TTGTTGGCTTGGAGCTTGTG+TGG 0.580944 2.2:-62004572 None:intergenic
CTGACCGAGTCAGCTAAAGA+AGG 0.586174 2.2:-62004616 None:intergenic
TTCTGTCCTTGAAAGAAACT+AGG 0.586929 2.2:-62004457 None:intergenic
TGAGGTCTTTGAAATTGCAA+TGG 0.588002 2.2:-62004412 None:intergenic
ACATGGATATTAGAAGTGGA+AGG 0.594815 2.2:-62002486 None:intergenic
TAACATGCTTGCTGCTGCTG+AGG 0.595156 2.2:-62004236 None:intergenic
TAGCAATGGTAAAACTGGTA+GGG 0.595770 2.2:+62003533 MS.gene002992:CDS
ACAGCCTTCTTTAGCTGACT+CGG 0.597997 2.2:+62004612 MS.gene002992:CDS
TAAGGAAGCTTACATTAACA+TGG 0.598862 2.2:-62002503 None:intergenic
TCGTTGGTATAAGTAGATGA+TGG 0.603216 2.2:-62002270 None:intergenic
AACCTTACCCGTAACACCAA+CGG 0.603945 2.2:+62002324 MS.gene002992:CDS
AATGAGAAAAGCTCGTGTCT+CGG 0.604308 2.2:+62003656 MS.gene002992:CDS
TCTAATGTAACAGTAGGGAA+TGG 0.608110 2.2:-62004364 None:intergenic
GGCTTTGCAGATGCAACTTG+TGG 0.608912 2.2:+62002949 MS.gene002992:CDS
GGATAATTGCAGATAAGTGA+TGG 0.611432 2.2:+62003793 MS.gene002992:intron
GGTTTACAACTTGCAAACAC+CGG 0.613072 2.2:+62002630 MS.gene002992:CDS
TGAGATCTAATGTAACAGTA+GGG 0.618128 2.2:-62004369 None:intergenic
TGGAGGAGATAGCGGCAGCA+AGG 0.622368 2.2:-62004684 None:intergenic
GAGTCAGCTAAAGAAGGCTG+TGG 0.624335 2.2:-62004610 None:intergenic
ATCAGCGGTGATAGCAGCAG+TGG 0.626713 2.2:-62004644 None:intergenic
GATCAAACACACCTCAGATG+AGG 0.626860 2.2:+62003508 MS.gene002992:CDS
ACCACCAGCAGCTATGGCAA+TGG 0.626876 2.2:+62004204 MS.gene002992:CDS
ATAGGTTCAACGTTGTGCCG+AGG 0.627663 2.2:+62004132 MS.gene002992:intron
AGCGGTGAAATTAGGATCAG+CGG 0.631536 2.2:-62004659 None:intergenic
TATAGATGCACTATGGCAGT+CGG 0.632166 2.2:+62003877 MS.gene002992:CDS
TGATGAAATGGTGCATGTTG+AGG 0.633017 2.2:-62004430 None:intergenic
TAGCTGCTGGTGGTAATGGA+TGG 0.633923 2.2:-62004195 None:intergenic
GTTGCCATGCTTGTTGAACA+AGG 0.639105 2.2:-62004325 None:intergenic
GAATCAGAAACACAAGGCTG+GGG 0.640268 2.2:+62003567 MS.gene002992:CDS
GATAGCGGCAGCAAGGACAG+CGG 0.648428 2.2:-62004677 None:intergenic
TAAGTGATGGATGCCAATGG+AGG 0.670782 2.2:+62003806 MS.gene002992:CDS
AACACCAACGGCGAAGACGG+CGG 0.671264 2.2:+62002336 MS.gene002992:CDS
GTGCATCTATAGTATGCTCG+AGG 0.675667 2.2:-62003865 None:intergenic
CCTCAGATGAGGAATAGCAA+TGG 0.676716 2.2:+62003519 MS.gene002992:CDS
TATTATATGGACAAAGCATG+GGG 0.678619 2.2:+62002174 None:intergenic
GCCATTGCCATAGCTGCTGG+TGG 0.689582 2.2:-62004205 None:intergenic
ATGGCCACCACCAATAATGG+AGG 0.694001 2.2:-62004701 None:intergenic
TAAACGTGCCAAGACTACTG+AGG 0.716111 2.2:+62002701 MS.gene002992:CDS
AGATAAGTGATGGATGCCAA+TGG 0.716557 2.2:+62003803 MS.gene002992:intron
AGTCCAGAATCAGAAACACA+AGG 0.719780 2.2:+62003561 MS.gene002992:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATATTGTTAAAATTC+AGG + chr2.2:62003344-62003363 MS.gene002992:intron 10.0%
!!! AATATTTTATCATTGAATTT+TGG - chr2.2:62002549-62002568 None:intergenic 10.0%
!! AATTAAATCACAATTGATTA+AGG + chr2.2:62003725-62003744 MS.gene002992:intron 15.0%
!! AGAAATATGAGAAATTAATA+AGG - chr2.2:62002524-62002543 None:intergenic 15.0%
!!! ATTGATGTTTTTTTGTTAAT+AGG + chr2.2:62004114-62004133 MS.gene002992:intron 15.0%
!! GTTTATATATCAATTTCATC+TGG - chr2.2:62002822-62002841 None:intergenic 20.0%
!! TAAATCCAATATCATCAAAA+AGG + chr2.2:62002440-62002459 MS.gene002992:CDS 20.0%
!! TATGGAATTCAAATCTTAAA+TGG + chr2.2:62003106-62003125 MS.gene002992:intron 20.0%
!! TTTGTTCAAATATTATAGAC+TGG + chr2.2:62002609-62002628 MS.gene002992:intron 20.0%
!!! ATTTGGACTATTTTTTTTAG+TGG - chr2.2:62003965-62003984 None:intergenic 20.0%
!!! TATAATCAGTCAAAATTTTC+TGG + chr2.2:62004511-62004530 MS.gene002992:CDS 20.0%
! AATTTAGAAAAAGCGACATT+TGG - chr2.2:62003982-62004001 None:intergenic 25.0%
! ATAGCTCTTGCTAATAAATT+TGG - chr2.2:62004301-62004320 None:intergenic 25.0%
! ATTAACATGGATATTAGAAG+TGG - chr2.2:62002493-62002512 None:intergenic 25.0%
! CAATCTGGCATATAATATAA+GGG - chr2.2:62003310-62003329 None:intergenic 25.0%
! GACTTTGTAAACTCAAAATA+TGG + chr2.2:62003088-62003107 MS.gene002992:intron 25.0%
! TGATATTGGATTTAACATGT+TGG - chr2.2:62002434-62002453 None:intergenic 25.0%
! TTAGTGTATGTTTGATATCA+CGG + chr2.2:62002737-62002756 MS.gene002992:intron 25.0%
! TTATTAACATGTTACCAATC+TGG - chr2.2:62003325-62003344 None:intergenic 25.0%
!! AATACAATTAGCAACTTTTC+AGG + chr2.2:62004769-62004788 MS.gene002992:CDS 25.0%
!! GATAGAATGTTTCCTATTTT+AGG + chr2.2:62002291-62002310 MS.gene002992:CDS 25.0%
!! TTTCTAACTGAATTTTGTGA+TGG + chr2.2:62003772-62003791 MS.gene002992:intron 25.0%
!! TTTGAAATTGCAATGGATTT+GGG - chr2.2:62004408-62004427 None:intergenic 25.0%
!!! AATATTTTCTGAGACTTGTT+TGG - chr2.2:62003594-62003613 None:intergenic 25.0%
!!! AATCTCCTTTTTGATGATAT+TGG - chr2.2:62002448-62002467 None:intergenic 25.0%
AAACTAGGTACTTGATGAAA+TGG - chr2.2:62004445-62004464 None:intergenic 30.0%
AATAGGAAACATTCTATCGT+TGG - chr2.2:62002289-62002308 None:intergenic 30.0%
CCAATCTGGCATATAATATA+AGG - chr2.2:62003311-62003330 None:intergenic 30.0%
CCTTATATTATATGCCAGAT+TGG + chr2.2:62003308-62003327 MS.gene002992:intron 30.0%
GAGGAAATATGGACAAAAAA+TGG + chr2.2:62003825-62003844 MS.gene002992:CDS 30.0%
TAAGGAAGCTTACATTAACA+TGG - chr2.2:62002506-62002525 None:intergenic 30.0%
TATGGACAAAAAATGGCTAA+AGG + chr2.2:62003832-62003851 MS.gene002992:CDS 30.0%
TGAGATCTAATGTAACAGTA+GGG - chr2.2:62004372-62004391 None:intergenic 30.0%
TTAGTGACGAAATTAGAGAT+AGG + chr2.2:62004001-62004020 MS.gene002992:intron 30.0%
TTCATGACATGTCAATTTAG+TGG + chr2.2:62003056-62003075 MS.gene002992:intron 30.0%
TTGACAGGAAATCCTAAAAT+AGG - chr2.2:62002306-62002325 None:intergenic 30.0%
! ATCTTGGTAACAACATATGA+AGG + chr2.2:62004163-62004182 MS.gene002992:CDS 30.0%
! TAATTACCTCATTTTCAGTG+TGG - chr2.2:62002994-62003013 None:intergenic 30.0%
!! CTTTGAAATTGCAATGGATT+TGG - chr2.2:62004409-62004428 None:intergenic 30.0%
!!! GCTGTTTTGAAGGTAAAAAA+GGG - chr2.2:62002251-62002270 None:intergenic 30.0%
AAAACTGAGGAGAAAAACCA+AGG + chr2.2:62003378-62003397 MS.gene002992:CDS 35.0%
ACATGGATATTAGAAGTGGA+AGG - chr2.2:62002489-62002508 None:intergenic 35.0%
AGCATACTATAGATGCACTA+TGG + chr2.2:62003870-62003889 MS.gene002992:CDS 35.0%
AGGAATAGCAATGGTAAAAC+TGG + chr2.2:62003528-62003547 MS.gene002992:CDS 35.0%
AGTATACTAACATCTCATGC+AGG - chr2.2:62003184-62003203 None:intergenic 35.0%
ATAGCAATGGTAAAACTGGT+AGG + chr2.2:62003532-62003551 MS.gene002992:CDS 35.0%
ATTTGCTTGATCTGCAACAT+TGG - chr2.2:62003625-62003644 None:intergenic 35.0%
CAAGTACCTAGTTTCTTTCA+AGG + chr2.2:62004451-62004470 MS.gene002992:CDS 35.0%
CCAAGACAATTTCTTGAGAT+AGG + chr2.2:62003420-62003439 MS.gene002992:CDS 35.0%
CCTATCTCAAGAAATTGTCT+TGG - chr2.2:62003423-62003442 None:intergenic 35.0%
CTTCAATTGTCTCAAGAAGT+TGG + chr2.2:62004535-62004554 MS.gene002992:CDS 35.0%
CTTGAGATAGGTACTACTAA+TGG + chr2.2:62003432-62003451 MS.gene002992:CDS 35.0%
GATCAATCTGTAGTAGATGA+TGG + chr2.2:62002657-62002676 MS.gene002992:CDS 35.0%
GGATAATTGCAGATAAGTGA+TGG + chr2.2:62003793-62003812 MS.gene002992:intron 35.0%
GGTTGTTAATGCAAAAACTG+AGG + chr2.2:62003365-62003384 MS.gene002992:intron 35.0%
GTGAGATCTAATGTAACAGT+AGG - chr2.2:62004373-62004392 None:intergenic 35.0%
TACTACAGATTGATCACTTC+CGG - chr2.2:62002652-62002671 None:intergenic 35.0%
TAGCAATGGTAAAACTGGTA+GGG + chr2.2:62003533-62003552 MS.gene002992:CDS 35.0%
TCATGTTACCGGTAATTACA+CGG + chr2.2:62002928-62002947 MS.gene002992:CDS 35.0%
TCGTTGGTATAAGTAGATGA+TGG - chr2.2:62002273-62002292 None:intergenic 35.0%
TCTAATGTAACAGTAGGGAA+TGG - chr2.2:62004367-62004386 None:intergenic 35.0%
TGAGAGTGAGATATTGGAAT+TGG - chr2.2:62002228-62002247 None:intergenic 35.0%
TTCTGTCCTTGAAAGAAACT+AGG - chr2.2:62004460-62004479 None:intergenic 35.0%
TTTGTCCATATTTCCTCCAT+TGG - chr2.2:62003822-62003841 None:intergenic 35.0%
! GTTGTTGTTGTTGTTGTTGT+TGG - chr2.2:62004591-62004610 None:intergenic 35.0%
! TGTTGGTTGTGTTCATTTGA+AGG - chr2.2:62002417-62002436 None:intergenic 35.0%
! TGTTGTTGCTATTGTTTGCA+TGG - chr2.2:62004723-62004742 None:intergenic 35.0%
!! TACCAAGATTGTTTTGTCCT+CGG - chr2.2:62004152-62004171 None:intergenic 35.0%
!! TGAGGTCTTTGAAATTGCAA+TGG - chr2.2:62004415-62004434 None:intergenic 35.0%
!!! GGCTGTTTTGAAGGTAAAAA+AGG - chr2.2:62002252-62002271 None:intergenic 35.0%
AAACTCACTTGTTTGCGAAC+TGG - chr2.2:62003907-62003926 None:intergenic 40.0%
AAAGGGTGAGAGTGAGATAT+TGG - chr2.2:62002234-62002253 None:intergenic 40.0%
AATGAGAAAAGCTCGTGTCT+CGG + chr2.2:62003656-62003675 MS.gene002992:CDS 40.0%
AATTGCAAGTGGAGCTTCAA+CGG + chr2.2:62002867-62002886 MS.gene002992:CDS 40.0%
AGAATCAGAAACACAAGGCT+GGG + chr2.2:62003566-62003585 MS.gene002992:CDS 40.0%
AGTCCAGAATCAGAAACACA+AGG + chr2.2:62003561-62003580 MS.gene002992:CDS 40.0%
ATTACGTACCTCAGTAGTCT+TGG - chr2.2:62002712-62002731 None:intergenic 40.0%
GAATCACCACACTGAAAATG+AGG + chr2.2:62002985-62003004 MS.gene002992:CDS 40.0%
GAGATGCTAAGTCATGTTAC+CGG + chr2.2:62002917-62002936 MS.gene002992:CDS 40.0%
GGTTTACAACTTGCAAACAC+CGG + chr2.2:62002630-62002649 MS.gene002992:CDS 40.0%
TATAGATGCACTATGGCAGT+CGG + chr2.2:62003877-62003896 MS.gene002992:CDS 40.0%
TCTACCTTGTTCAACAAGCA+TGG + chr2.2:62004321-62004340 MS.gene002992:CDS 40.0%
TGATGAAATGGTGCATGTTG+AGG - chr2.2:62004433-62004452 None:intergenic 40.0%
TGCTAGATCAGAAGCTTCAA+TGG + chr2.2:62003683-62003702 MS.gene002992:CDS 40.0%
! ACCAATAATGGAGGAGATAG+CGG - chr2.2:62004695-62004714 None:intergenic 40.0%
! AGAAGTGGAAGGCTTTTCAT+CGG - chr2.2:62002478-62002497 None:intergenic 40.0%
! AGAGAAGAAATCGACTTCAC+TGG - chr2.2:62002376-62002395 None:intergenic 40.0%
! TGTTGTTGTTGTTGTTGGCT+TGG - chr2.2:62004586-62004605 None:intergenic 40.0%
!! AGATAAGTGATGGATGCCAA+TGG + chr2.2:62003803-62003822 MS.gene002992:intron 40.0%
!! CGACTTCACTGGTTATTTTC+CGG - chr2.2:62002365-62002384 None:intergenic 40.0%
!! GTAGATGATGGCTGTTTTGA+AGG - chr2.2:62002261-62002280 None:intergenic 40.0%
AACCTTACCCGTAACACCAA+CGG + chr2.2:62002324-62002343 MS.gene002992:CDS 45.0%
ACAGCCTTCTTTAGCTGACT+CGG + chr2.2:62004612-62004631 MS.gene002992:CDS 45.0%
AGCGGTGAAATTAGGATCAG+CGG - chr2.2:62004662-62004681 None:intergenic 45.0%
ATCTCCTCCATTATTGGTGG+TGG + chr2.2:62004697-62004716 MS.gene002992:CDS 45.0%
CAGAATCAGAAACACAAGGC+TGG + chr2.2:62003565-62003584 MS.gene002992:CDS 45.0%
CCTCAGATGAGGAATAGCAA+TGG + chr2.2:62003519-62003538 MS.gene002992:CDS 45.0%
CTATAGTATGCTCGAGGACA+TGG - chr2.2:62003862-62003881 None:intergenic 45.0%
CTGCAAAGCCGTGTAATTAC+CGG - chr2.2:62002939-62002958 None:intergenic 45.0%
GAATCAGAAACACAAGGCTG+GGG + chr2.2:62003567-62003586 MS.gene002992:CDS 45.0%
GAGGAGAAAAACCAAGGTGT+TGG + chr2.2:62003384-62003403 MS.gene002992:CDS 45.0%
GATCAAACACACCTCAGATG+AGG + chr2.2:62003508-62003527 MS.gene002992:CDS 45.0%
GCAGCAAGCATGTTACTATC+AGG + chr2.2:62004244-62004263 MS.gene002992:CDS 45.0%
GCTATCTCCTCCATTATTGG+TGG + chr2.2:62004694-62004713 MS.gene002992:CDS 45.0%
GGATCAATGTCAAGTGCAGA+TGG + chr2.2:62004265-62004284 MS.gene002992:CDS 45.0%
GGATGCCAATGGAGGAAATA+TGG + chr2.2:62003814-62003833 MS.gene002992:CDS 45.0%
GTGCATCTATAGTATGCTCG+AGG - chr2.2:62003868-62003887 None:intergenic 45.0%
TAAACGTGCCAAGACTACTG+AGG + chr2.2:62002701-62002720 MS.gene002992:CDS 45.0%
TCAGCTTGCACAATTGCAAG+TGG + chr2.2:62002856-62002875 MS.gene002992:intron 45.0%
TGCCGAGGACAAAACAATCT+TGG + chr2.2:62004147-62004166 MS.gene002992:CDS 45.0%
! CAGCCTTGTGTTTCTGATTC+TGG - chr2.2:62003567-62003586 None:intergenic 45.0%
! CCATTGCTATTCCTCATCTG+AGG - chr2.2:62003522-62003541 None:intergenic 45.0%
! GTTGCCATGCTTGTTGAACA+AGG - chr2.2:62004328-62004347 None:intergenic 45.0%
!! GAGAAAAACCAAGGTGTTGG+TGG + chr2.2:62003387-62003406 MS.gene002992:CDS 45.0%
!! TAAGTGATGGATGCCAATGG+AGG + chr2.2:62003806-62003825 MS.gene002992:CDS 45.0%
ATAGGTTCAACGTTGTGCCG+AGG + chr2.2:62004132-62004151 MS.gene002992:intron 50.0%
ATGGCCACCACCAATAATGG+AGG - chr2.2:62004704-62004723 None:intergenic 50.0%
CTGACCGAGTCAGCTAAAGA+AGG - chr2.2:62004619-62004638 None:intergenic 50.0%
GAGTCAGCTAAAGAAGGCTG+TGG - chr2.2:62004613-62004632 None:intergenic 50.0%
GCAAGGACAGCGGTGAAATT+AGG - chr2.2:62004670-62004689 None:intergenic 50.0%
GCCGCTATCTCCTCCATTAT+TGG + chr2.2:62004691-62004710 MS.gene002992:CDS 50.0%
GGCTTTGCAGATGCAACTTG+TGG + chr2.2:62002949-62002968 MS.gene002992:CDS 50.0%
GTGTTACGGGTAAGGTTGAC+AGG - chr2.2:62002321-62002340 None:intergenic 50.0%
TCCATTACCACCAGCAGCTA+TGG + chr2.2:62004198-62004217 MS.gene002992:CDS 50.0%
TGCATGGCCACCACCAATAA+TGG - chr2.2:62004707-62004726 None:intergenic 50.0%
! TAACATGCTTGCTGCTGCTG+AGG - chr2.2:62004239-62004258 None:intergenic 50.0%
!! TAGCTGCTGGTGGTAATGGA+TGG - chr2.2:62004198-62004217 None:intergenic 50.0%
!! TTGTTGGCTTGGAGCTTGTG+TGG - chr2.2:62004575-62004594 None:intergenic 50.0%
ACCACCAGCAGCTATGGCAA+TGG + chr2.2:62004204-62004223 MS.gene002992:CDS 55.0%
ATCAGCGGTGATAGCAGCAG+TGG - chr2.2:62004647-62004666 None:intergenic 55.0%
CCATTGCTCCACCAACACCT+TGG - chr2.2:62003398-62003417 None:intergenic 55.0%
CGTAACACCAACGGCGAAGA+CGG + chr2.2:62002333-62002352 MS.gene002992:CDS 55.0%
GATGCCATTGCCATAGCTGC+TGG - chr2.2:62004211-62004230 None:intergenic 55.0%
GCCATAGCTGCTGGTGGTAA+TGG - chr2.2:62004202-62004221 None:intergenic 55.0%
!! CCAAGGTGTTGGTGGAGCAA+TGG + chr2.2:62003395-62003414 MS.gene002992:CDS 55.0%
!! CGTCTTCGCCGTTGGTGTTA+CGG - chr2.2:62002335-62002354 None:intergenic 55.0%
!! GTCTTCGCCGTTGGTGTTAC+GGG - chr2.2:62002334-62002353 None:intergenic 55.0%
AACACCAACGGCGAAGACGG+CGG + chr2.2:62002336-62002355 MS.gene002992:CDS 60.0%
AGCGGTGATAGCAGCAGTGG+CGG - chr2.2:62004644-62004663 None:intergenic 60.0%
GCCATTGCCATAGCTGCTGG+TGG - chr2.2:62004208-62004227 None:intergenic 60.0%
! GATAGCGGCAGCAAGGACAG+CGG - chr2.2:62004680-62004699 None:intergenic 60.0%
! TGGAGGAGATAGCGGCAGCA+AGG - chr2.2:62004687-62004706 None:intergenic 60.0%
!! CGCCGTTGGTGTTACGGGTA+AGG - chr2.2:62002329-62002348 None:intergenic 60.0%
ACGGCGAAGACGGCGGTGAC+CGG + chr2.2:62002343-62002362 MS.gene002992:CDS 70.0%
GTCACCGCCGTCTTCGCCGT+TGG - chr2.2:62002343-62002362 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 62002180 62004798 62002180 ID=MS.gene002992
chr2.2 mRNA 62002180 62004798 62002180 ID=MS.gene002992.t1;Parent=MS.gene002992
chr2.2 exon 62002180 62002512 62002180 ID=MS.gene002992.t1.exon1;Parent=MS.gene002992.t1
chr2.2 CDS 62002180 62002512 62002180 ID=cds.MS.gene002992.t1;Parent=MS.gene002992.t1
chr2.2 exon 62002627 62002722 62002627 ID=MS.gene002992.t1.exon2;Parent=MS.gene002992.t1
chr2.2 CDS 62002627 62002722 62002627 ID=cds.MS.gene002992.t1;Parent=MS.gene002992.t1
chr2.2 exon 62002860 62003006 62002860 ID=MS.gene002992.t1.exon3;Parent=MS.gene002992.t1
chr2.2 CDS 62002860 62003006 62002860 ID=cds.MS.gene002992.t1;Parent=MS.gene002992.t1
chr2.2 exon 62003366 62003704 62003366 ID=MS.gene002992.t1.exon4;Parent=MS.gene002992.t1
chr2.2 CDS 62003366 62003704 62003366 ID=cds.MS.gene002992.t1;Parent=MS.gene002992.t1
chr2.2 exon 62003805 62003918 62003805 ID=MS.gene002992.t1.exon5;Parent=MS.gene002992.t1
chr2.2 CDS 62003805 62003918 62003805 ID=cds.MS.gene002992.t1;Parent=MS.gene002992.t1
chr2.2 exon 62004136 62004798 62004136 ID=MS.gene002992.t1.exon6;Parent=MS.gene002992.t1
chr2.2 CDS 62004136 62004798 62004136 ID=cds.MS.gene002992.t1;Parent=MS.gene002992.t1
Gene Sequence

>MS.gene002992

ATGGACAAAGCATGGGGTCTAGCTCTTGATACTTCTTCATCTTCTCCAATTCCAATATCTCACTCTCACCCTTTTTTACCTTCAAAACAGCCATCATCTACTTATACCAACGATAGAATGTTTCCTATTTTAGGATTTCCTGTCAACCTTACCCGTAACACCAACGGCGAAGACGGCGGTGACCGGAAAATAACCAGTGAAGTCGATTTCTTCTCTGAAAGAAACAAACTATCACCTTCAAATGAACACAACCAACATGTTAAATCCAATATCATCAAAAAGGAGATTGTTTCAACCGATGAAAAGCCTTCCACTTCTAATATCCATGTTAATGTAAGCTTCCTTATTAATTTCTCATATTTCTTTCCAAAATTCAATGATAAAATATTTCTTATAAATAATAACATATGTACTAATTTAATTTTTTTTTTTGTTCAAATATTATAGACTGGTTTACAACTTGCAAACACCGGAAGTGATCAATCTGTAGTAGATGATGGAGTTACATCTGATGCTGAAAATAAACGTGCCAAGACTACTGAGGTACGTAATTTAATTTAGTGTATGTTTGATATCACGGTTTGTTTATCAGAGAATTACTGTGTTATATATGTAACTAGTAATTTTATGTAGTCTTTACCAGATGAAATTGATATATAAACTTGTTTAATTTGATTCAGCTTGCACAATTGCAAGTGGAGCTTCAACGGATGAATTCAGAGAACAAAAAGCTGAAAGAGATGCTAAGTCATGTTACCGGTAATTACACGGCTTTGCAGATGCAACTTGTGGCATTAATGCAAAAGAATCACCACACTGAAAATGAGGTAATTATCAATTGCTAGTTTCTTTCTATTTTCATTATTCTTTTGTATGTTCATGACATGTCAATTTAGTGGTACAAGTTTGACTTTGTAAACTCAAAATATGGAATTCAAATCTTAAATGGAAAAATTGTACAATTGTCATAGTTGTTAGTAATACTTCTTTGACATAAATGACCTGCATGAGATGTTAGTATACTAAAAGTAGAAATTAAATATTGAAAATTATGTTAATTTATTTCTCAAAATTGTGAAAACTAATTTTTCTCAACATATACTTGCTATTTTTAGAATCTTAGTAAGCCCTTATATTATATGCCAGATTGGTAACATGTTAATAAATTAATATTGTTAAAATTCAGGTTGTTAATGCAAAAACTGAGGAGAAAAACCAAGGTGTTGGTGGAGCAATGGTACCAAGACAATTTCTTGAGATAGGTACTACTAATGGAACAGCAGAAGTTGAAGATCAAGTATCAAATTCATCATCTGATGAAAGAACAAGATCAAACACACCTCAGATGAGGAATAGCAATGGTAAAACTGGTAGGGAAGACAGTCCAGAATCAGAAACACAAGGCTGGGGACCAAACAAGTCTCAGAAAATATTGAACTCTTCCAATGTTGCAGATCAAGCAAATACAGAAGCTACAATGAGAAAAGCTCGTGTCTCGGTTCGTGCTAGATCAGAAGCTTCAATGGTATGCATTCATTAACTACTAATTAAATCACAATTGATTAAGGCACTTGAATAATTTCTTGATTAGTTTTCTAACTGAATTTTGTGATGGATAATTGCAGATAAGTGATGGATGCCAATGGAGGAAATATGGACAAAAAATGGCTAAAGGAAATCCATGTCCTCGAGCATACTATAGATGCACTATGGCAGTCGGTTGTCCAGTTCGCAAACAAGTGAGTTTTCTTTTTACTAAAGAAATATCGTGTCTAATATGAACCACTAAAAAAAATAGTCCAAATGTCGCTTTTTCTAAATTTAGTGACGAAATTAGAGATAGGTCGCTTTTTCTGTATAAGTTTGTATAGATGATTTAACTTACTATATTAGAAGTAGTATTAGTATTTTTGTATTGTAACTTAGAGCTAATTATTGATGTTTTTTTGTTAATAGGTTCAACGTTGTGCCGAGGACAAAACAATCTTGGTAACAACATATGAAGGAACACATAACCATCCATTACCACCAGCAGCTATGGCAATGGCATCAACAACCTCAGCAGCAGCAAGCATGTTACTATCAGGATCAATGTCAAGTGCAGATGGAATAATGACACCAAATTTATTAGCAAGAGCTATTCTACCTTGTTCAACAAGCATGGCAACACTTTCAGCTTCAGCACCATTCCCTACTGTTACATTAGATCTCACACAAAATTCAAACCCAAATCCATTGCAATTTCAAAGACCTCAACATGCACCATTTCATCAAGTACCTAGTTTCTTTCAAGGACAGAATCAGAATTTTGCACAAGCAGCAGCATCACTTTATAATCAGTCAAAATTTTCTGGTCTTCAATTGTCTCAAGAAGTTGGTTCTTCTCATTTAACCACACAAGCTCCAAGCCAACAACAACAACAACAACAACCACAGCCTTCTTTAGCTGACTCGGTCAGCGCCGCCACTGCTGCTATCACCGCTGATCCTAATTTCACCGCTGTCCTTGCTGCCGCTATCTCCTCCATTATTGGTGGTGGCCATGCAAACAATAGCAACAACAGCAACAACAACAACAGCAATAGCAGAAATACAATTAGCAACTTTTCAGGAAACTAA
Protein sequence

>MS.gene002992.t1

MDKAWGLALDTSSSSPIPISHSHPFLPSKQPSSTYTNDRMFPILGFPVNLTRNTNGEDGGDRKITSEVDFFSERNKLSPSNEHNQHVKSNIIKKEIVSTDEKPSTSNIHVNTGLQLANTGSDQSVVDDGVTSDAENKRAKTTELAQLQVELQRMNSENKKLKEMLSHVTGNYTALQMQLVALMQKNHHTENEVVNAKTEEKNQGVGGAMVPRQFLEIGTTNGTAEVEDQVSNSSSDERTRSNTPQMRNSNGKTGREDSPESETQGWGPNKSQKILNSSNVADQANTEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMSSADGIMTPNLLARAILPCSTSMATLSASAPFPTVTLDLTQNSNPNPLQFQRPQHAPFHQVPSFFQGQNQNFAQAAASLYNQSKFSGLQLSQEVGSSHLTTQAPSQQQQQQQPQPSLADSVSAATAAITADPNFTAVLAAAISSIIGGGHANNSNNSNNNNSNSRNTISNFSGN