Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003006.t1 | XP_013462889.1 | 88.1 | 696 | 62 | 4 | 2 | 687 | 141 | 825 | 0.00E+00 | 1272.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003006.t1 | Q9SSE9 | 42.5 | 753 | 327 | 14 | 15 | 678 | 155 | 890 | 2.7e-158 | 560.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003006.t1 | A0A072V4L2 | 88.1 | 696 | 62 | 4 | 2 | 687 | 141 | 825 | 0.0e+00 | 1272.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene003006.t1 | TR | Jumonji |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003006.t1 | MTR_2g024270 | 87.931 | 696 | 63 | 4 | 2 | 687 | 141 | 825 | 0.0 | 1211 |
MS.gene003006.t1 | MTR_2g024140 | 84.457 | 682 | 93 | 3 | 2 | 683 | 21 | 689 | 0.0 | 1155 |
MS.gene003006.t1 | MTR_4g132540 | 61.813 | 728 | 222 | 7 | 2 | 685 | 155 | 870 | 0.0 | 892 |
MS.gene003006.t1 | MTR_1g114150 | 48.951 | 715 | 306 | 12 | 15 | 679 | 343 | 1048 | 0.0 | 637 |
MS.gene003006.t1 | MTR_5g065200 | 49.570 | 698 | 314 | 12 | 15 | 679 | 140 | 832 | 0.0 | 617 |
MS.gene003006.t1 | MTR_1g069565 | 48.188 | 745 | 299 | 15 | 14 | 679 | 143 | 879 | 0.0 | 612 |
MS.gene003006.t1 | MTR_1g114130 | 48.468 | 718 | 309 | 14 | 15 | 679 | 327 | 1036 | 0.0 | 605 |
MS.gene003006.t1 | MTR_1g114070 | 45.557 | 709 | 331 | 13 | 15 | 679 | 225 | 922 | 0.0 | 571 |
MS.gene003006.t1 | MTR_1g069565 | 43.641 | 802 | 308 | 17 | 14 | 679 | 143 | 936 | 0.0 | 560 |
MS.gene003006.t1 | MTR_5g047620 | 47.473 | 653 | 272 | 16 | 89 | 679 | 152 | 795 | 2.21e-179 | 532 |
MS.gene003006.t1 | MTR_2g024240 | 82.624 | 282 | 44 | 2 | 363 | 644 | 112 | 388 | 5.74e-165 | 479 |
MS.gene003006.t1 | MTR_2g024240 | 90.722 | 97 | 8 | 1 | 183 | 278 | 1 | 97 | 7.06e-51 | 182 |
MS.gene003006.t1 | MTR_1g114150 | 44.059 | 606 | 280 | 12 | 15 | 570 | 343 | 939 | 2.03e-152 | 466 |
MS.gene003006.t1 | MTR_0020s0100 | 43.106 | 631 | 296 | 19 | 77 | 664 | 81 | 691 | 9.19e-151 | 454 |
MS.gene003006.t1 | MTR_1g083120 | 35.027 | 728 | 386 | 13 | 13 | 682 | 196 | 894 | 1.19e-141 | 437 |
MS.gene003006.t1 | MTR_1g083120 | 35.027 | 728 | 386 | 13 | 13 | 682 | 213 | 911 | 2.84e-141 | 437 |
MS.gene003006.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 15 | 507 | 140 | 666 | 1.01e-128 | 402 |
MS.gene003006.t1 | MTR_7g117445 | 46.875 | 160 | 72 | 3 | 461 | 620 | 719 | 865 | 1.74e-32 | 135 |
MS.gene003006.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 15 | 507 | 140 | 666 | 2.49e-128 | 402 |
MS.gene003006.t1 | MTR_7g117445 | 51.131 | 221 | 95 | 3 | 461 | 681 | 719 | 926 | 3.61e-58 | 212 |
MS.gene003006.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 15 | 507 | 140 | 666 | 2.89e-128 | 402 |
MS.gene003006.t1 | MTR_7g117445 | 51.131 | 221 | 95 | 4 | 461 | 681 | 719 | 926 | 3.96e-58 | 212 |
MS.gene003006.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 15 | 507 | 140 | 666 | 5.15e-128 | 402 |
MS.gene003006.t1 | MTR_7g117445 | 51.131 | 221 | 95 | 3 | 461 | 681 | 719 | 926 | 4.13e-58 | 212 |
MS.gene003006.t1 | MTR_1g083120 | 34.610 | 679 | 356 | 14 | 13 | 632 | 196 | 845 | 4.24e-124 | 389 |
MS.gene003006.t1 | MTR_1g083120 | 34.731 | 668 | 349 | 13 | 13 | 622 | 196 | 834 | 7.28e-124 | 389 |
MS.gene003006.t1 | MTR_1g008060 | 42.742 | 496 | 236 | 13 | 15 | 487 | 870 | 1340 | 3.05e-111 | 369 |
MS.gene003006.t1 | MTR_1g008060 | 62.581 | 155 | 58 | 0 | 530 | 684 | 1546 | 1700 | 6.42e-56 | 207 |
MS.gene003006.t1 | MTR_1g008060 | 42.490 | 506 | 241 | 14 | 7 | 487 | 851 | 1331 | 3.41e-111 | 369 |
MS.gene003006.t1 | MTR_1g008060 | 62.581 | 155 | 58 | 0 | 530 | 684 | 1537 | 1691 | 6.12e-56 | 207 |
MS.gene003006.t1 | MTR_2g011630 | 31.496 | 762 | 423 | 14 | 13 | 683 | 205 | 958 | 1.65e-109 | 354 |
MS.gene003006.t1 | MTR_8g465700 | 81.000 | 200 | 30 | 3 | 295 | 492 | 1 | 194 | 1.31e-100 | 310 |
MS.gene003006.t1 | MTR_2g011630 | 31.753 | 696 | 374 | 12 | 77 | 678 | 21 | 709 | 6.46e-100 | 322 |
MS.gene003006.t1 | MTR_2g011630 | 31.753 | 696 | 374 | 12 | 77 | 678 | 53 | 741 | 1.00e-99 | 323 |
MS.gene003006.t1 | MTR_8g465720 | 65.789 | 190 | 13 | 4 | 509 | 688 | 18 | 165 | 3.14e-71 | 229 |
MS.gene003006.t1 | MTR_8g062940 | 34.503 | 342 | 203 | 7 | 15 | 347 | 33 | 362 | 3.57e-51 | 182 |
MS.gene003006.t1 | MTR_4g091520 | 34.967 | 306 | 175 | 4 | 219 | 505 | 718 | 1018 | 6.48e-46 | 177 |
MS.gene003006.t1 | MTR_4g091520 | 43.005 | 193 | 93 | 3 | 505 | 681 | 1087 | 1278 | 3.32e-41 | 162 |
MS.gene003006.t1 | MTR_4g091520 | 33.740 | 246 | 147 | 7 | 13 | 245 | 258 | 500 | 1.17e-30 | 129 |
MS.gene003006.t1 | MTR_4g091520 | 34.967 | 306 | 175 | 4 | 219 | 505 | 648 | 948 | 6.82e-46 | 176 |
MS.gene003006.t1 | MTR_4g091520 | 33.740 | 246 | 147 | 7 | 13 | 245 | 258 | 500 | 9.62e-31 | 129 |
MS.gene003006.t1 | MTR_4g091520 | 34.967 | 306 | 175 | 4 | 219 | 505 | 683 | 983 | 7.55e-46 | 176 |
MS.gene003006.t1 | MTR_4g091520 | 33.740 | 246 | 147 | 7 | 13 | 245 | 258 | 500 | 8.69e-31 | 130 |
MS.gene003006.t1 | MTR_4g091520 | 34.967 | 306 | 175 | 4 | 219 | 505 | 718 | 1018 | 8.33e-46 | 176 |
MS.gene003006.t1 | MTR_4g091520 | 33.740 | 246 | 147 | 7 | 13 | 245 | 258 | 500 | 1.25e-30 | 129 |
MS.gene003006.t1 | MTR_0295s0020 | 48.101 | 158 | 82 | 0 | 353 | 510 | 9 | 166 | 4.84e-45 | 159 |
MS.gene003006.t1 | MTR_8g013920 | 63.218 | 87 | 28 | 2 | 390 | 476 | 40 | 122 | 1.30e-28 | 113 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003006.t1 | AT1G11950 | 55.087 | 688 | 286 | 8 | 12 | 682 | 190 | 871 | 0.0 | 770 |
MS.gene003006.t1 | AT1G11950 | 55.087 | 688 | 286 | 8 | 12 | 682 | 190 | 871 | 0.0 | 770 |
MS.gene003006.t1 | AT1G62310 | 55.391 | 677 | 279 | 5 | 9 | 663 | 203 | 878 | 0.0 | 753 |
MS.gene003006.t1 | AT1G11950 | 52.751 | 618 | 269 | 8 | 12 | 612 | 190 | 801 | 0.0 | 654 |
MS.gene003006.t1 | AT3G07610 | 47.896 | 499 | 213 | 9 | 213 | 680 | 410 | 892 | 1.54e-139 | 434 |
MS.gene003006.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 15 | 197 | 155 | 340 | 8.34e-37 | 148 |
MS.gene003006.t1 | AT3G07610 | 45.174 | 518 | 221 | 10 | 213 | 680 | 410 | 914 | 3.90e-130 | 410 |
MS.gene003006.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 15 | 197 | 155 | 340 | 7.94e-37 | 149 |
MS.gene003006.t1 | AT4G00990 | 42.043 | 509 | 256 | 12 | 14 | 497 | 79 | 573 | 1.88e-119 | 375 |
MS.gene003006.t1 | AT4G00990 | 63.636 | 88 | 32 | 0 | 533 | 620 | 683 | 770 | 1.03e-29 | 125 |
MS.gene003006.t1 | AT4G00990 | 42.043 | 509 | 256 | 12 | 14 | 497 | 79 | 573 | 2.33e-119 | 375 |
MS.gene003006.t1 | AT4G00990 | 59.375 | 96 | 39 | 0 | 533 | 628 | 683 | 778 | 1.55e-30 | 128 |
MS.gene003006.t1 | AT4G00990 | 42.043 | 509 | 256 | 12 | 14 | 497 | 79 | 573 | 3.86e-119 | 376 |
MS.gene003006.t1 | AT4G00990 | 57.516 | 153 | 65 | 0 | 533 | 685 | 683 | 835 | 1.01e-52 | 196 |
MS.gene003006.t1 | AT1G09060 | 32.493 | 714 | 410 | 13 | 15 | 682 | 206 | 893 | 5.39e-114 | 365 |
MS.gene003006.t1 | AT1G09060 | 32.493 | 714 | 410 | 13 | 15 | 682 | 206 | 893 | 5.39e-114 | 365 |
MS.gene003006.t1 | AT1G09060 | 32.493 | 714 | 410 | 13 | 15 | 682 | 220 | 907 | 6.45e-114 | 365 |
MS.gene003006.t1 | AT1G09060 | 32.493 | 714 | 410 | 13 | 15 | 682 | 220 | 907 | 6.45e-114 | 365 |
MS.gene003006.t1 | AT4G21430 | 29.059 | 733 | 419 | 19 | 15 | 686 | 227 | 919 | 1.83e-84 | 286 |
MS.gene003006.t1 | AT3G07610 | 41.924 | 291 | 139 | 6 | 213 | 483 | 410 | 690 | 4.89e-59 | 213 |
MS.gene003006.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 15 | 197 | 155 | 340 | 1.91e-36 | 147 |
Find 121 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGTTATACCTTGTATTT+TGG | 0.175006 | 2.2:-61859076 | None:intergenic |
CCACAACCACTTAGTTCTTT+TGG | 0.210099 | 2.2:-61859707 | None:intergenic |
ATAAGTATGCCTAAATTCTT+TGG | 0.242870 | 2.2:-61860911 | None:intergenic |
CATATTTCAAAGGAACATTT+AGG | 0.255943 | 2.2:-61859485 | None:intergenic |
GATATCTCCAATTGACATAT+TGG | 0.276410 | 2.2:-61858760 | None:intergenic |
TCTCTTGCCCTGTGATTCTT+AGG | 0.277632 | 2.2:-61861478 | None:intergenic |
AGGAATGTTGGATAATATAT+TGG | 0.300780 | 2.2:+61858406 | None:intergenic |
GAAGGTCTTGTTCAAGATAA+TGG | 0.311719 | 2.2:+61860772 | MS.gene003006:CDS |
ATATCTCCAATTGACATATT+GGG | 0.312488 | 2.2:-61858759 | None:intergenic |
TTACTTGTATCACAAGTTAT+TGG | 0.332796 | 2.2:-61859617 | None:intergenic |
GAAAACACTCCAAAGAATTT+AGG | 0.338721 | 2.2:+61860902 | MS.gene003006:CDS |
AGATGGGAGGATATCTAAAT+TGG | 0.352006 | 2.2:+61859763 | MS.gene003006:CDS |
AAGAAGCTAGAGGAAGAGTT+TGG | 0.361005 | 2.2:+61861087 | MS.gene003006:CDS |
TGACCAAGTTGTTAAAGAAT+TGG | 0.364202 | 2.2:+61861651 | MS.gene003006:CDS |
ATCACTATTCACATTCCATT+TGG | 0.366620 | 2.2:-61859666 | None:intergenic |
AGAAACAGCTGGTGCACTTT+GGG | 0.368153 | 2.2:+61860834 | MS.gene003006:CDS |
CTTCCAATTCTTTAACAACT+TGG | 0.368676 | 2.2:-61861654 | None:intergenic |
CAGATGTCAAGTGACCTTAT+AGG | 0.384738 | 2.2:+61859893 | MS.gene003006:CDS |
AGTTGCCACCAAATGTTATA+AGG | 0.385343 | 2.2:+61860440 | MS.gene003006:CDS |
TCCTCTGCCAAGCTCTTCTC+TGG | 0.390375 | 2.2:-61860500 | None:intergenic |
GACACTCGCCAGTTCTTTGA+AGG | 0.395120 | 2.2:+61860241 | MS.gene003006:CDS |
AAAGAATTGGAAGCTTTCAT+TGG | 0.399008 | 2.2:+61861664 | MS.gene003006:CDS |
TTGTGATACAAGTAATTTAG+AGG | 0.403494 | 2.2:+61859625 | MS.gene003006:CDS |
ATTGCAATTCTTACGGCAAA+AGG | 0.411110 | 2.2:-61858796 | None:intergenic |
GTTTAAGATGTATTAAAGAT+TGG | 0.412154 | 2.2:+61858617 | MS.gene003006:CDS |
GTTGGGAGCCAATGGTTACT+TGG | 0.413326 | 2.2:+61860002 | MS.gene003006:CDS |
ATTTAGGACAGCTTCTATAA+AGG | 0.417061 | 2.2:-61859469 | None:intergenic |
CATTGCAATTGCAATTCTTA+CGG | 0.420522 | 2.2:-61858803 | None:intergenic |
TTATCATGACATGGAGTTTG+TGG | 0.423540 | 2.2:-61859201 | None:intergenic |
CTTTATAACCTTCAAAGAAC+TGG | 0.427941 | 2.2:-61860249 | None:intergenic |
TGTACAGGCTATTGATTGCT+TGG | 0.428553 | 2.2:+61860078 | MS.gene003006:CDS |
GAGCACATAAGGCTCAAGAT+AGG | 0.434348 | 2.2:+61860746 | MS.gene003006:CDS |
AAGTCAGGCCTTATAACATT+TGG | 0.438608 | 2.2:-61860448 | None:intergenic |
CACCGTTCCTCCAATACTCT+TGG | 0.440918 | 2.2:-61859934 | None:intergenic |
AGAACGTCAAATATTAGAAC+AGG | 0.441025 | 2.2:-61859959 | None:intergenic |
GTGATAGATGATGGCACAAA+AGG | 0.451379 | 2.2:-61860799 | None:intergenic |
ACTTTGCAGTATCTTCTCTT+CGG | 0.452091 | 2.2:-61860864 | None:intergenic |
CAGAAACAGCTGGTGCACTT+TGG | 0.453707 | 2.2:+61860833 | MS.gene003006:CDS |
ATGTTGAGATATTTACCAAA+TGG | 0.459203 | 2.2:+61859651 | MS.gene003006:CDS |
TATTTAAATTCCAAGAGTAT+TGG | 0.460840 | 2.2:+61859924 | MS.gene003006:CDS |
AATTTAGATATCCTCCCATC+TGG | 0.461007 | 2.2:-61859761 | None:intergenic |
GTATTTCTTTGCAACAACTA+AGG | 0.462093 | 2.2:-61859508 | None:intergenic |
AATGTTTGCTTGTGTTCAAA+AGG | 0.473646 | 2.2:+61858822 | MS.gene003006:CDS |
AGGTACCCCAATATGTCAAT+TGG | 0.473897 | 2.2:+61858753 | MS.gene003006:intron |
GGATCGCAATACTCTTGAAA+TGG | 0.475406 | 2.2:-61860388 | None:intergenic |
TTAAATTCCAAGAGTATTGG+AGG | 0.475955 | 2.2:+61859927 | MS.gene003006:CDS |
AAATGATAATTCAAATGTAC+AGG | 0.476218 | 2.2:+61860063 | MS.gene003006:CDS |
TTGCAATTCTTACGGCAAAA+GGG | 0.477440 | 2.2:-61858795 | None:intergenic |
TTATTGTTCTCCAGTAAAAG+AGG | 0.483787 | 2.2:+61860930 | MS.gene003006:CDS |
GTAGTAAATTAATCATATAT+CGG | 0.484803 | 2.2:-61858999 | None:intergenic |
GACGTTCTCAAACAAGGGAC+AGG | 0.489842 | 2.2:+61859974 | MS.gene003006:CDS |
GTTCTTTGAAGGTTATAAAG+AGG | 0.497551 | 2.2:+61860252 | MS.gene003006:CDS |
GTCGACTTCCTAAGAATCAC+AGG | 0.505039 | 2.2:+61861470 | MS.gene003006:CDS |
ACACCTTCAGATTTCTCACT+TGG | 0.506166 | 2.2:-61861259 | None:intergenic |
GTGTTCAAAAGGAATGATCA+AGG | 0.509692 | 2.2:+61858833 | MS.gene003006:CDS |
AACAAGGGACAGGATTGAGT+TGG | 0.510060 | 2.2:+61859984 | MS.gene003006:CDS |
ACAAACTCCATGTCATGATA+AGG | 0.516847 | 2.2:+61859203 | MS.gene003006:CDS |
ATGTCATCAGTGCTTGAGAA+AGG | 0.520090 | 2.2:+61858549 | MS.gene003006:CDS |
AGGATTGAGTTGGGAGCCAA+TGG | 0.523462 | 2.2:+61859994 | MS.gene003006:CDS |
TTCAGATTTCTCACTTGGTG+AGG | 0.524957 | 2.2:-61861254 | None:intergenic |
AGCACATAAGGCTCAAGATA+GGG | 0.524973 | 2.2:+61860747 | MS.gene003006:CDS |
GAGTATTGCGATCCTCGAGC+TGG | 0.528942 | 2.2:+61860397 | MS.gene003006:CDS |
TCAGGCCTTATAACATTTGG+TGG | 0.529368 | 2.2:-61860445 | None:intergenic |
GTATCACAAGTTATTGGTAG+AGG | 0.529567 | 2.2:-61859611 | None:intergenic |
ACAAGGGACAGGATTGAGTT+GGG | 0.531143 | 2.2:+61859985 | MS.gene003006:CDS |
TCAGATTTCTCACTTGGTGA+GGG | 0.534163 | 2.2:-61861253 | None:intergenic |
AAGGCTCAAGATAGGGAAGA+AGG | 0.536972 | 2.2:+61860754 | MS.gene003006:CDS |
ATGATAAGGAGCGTATGTAT+TGG | 0.537974 | 2.2:+61859217 | MS.gene003006:CDS |
ACCAGAGAAGAGCTTGGCAG+AGG | 0.538284 | 2.2:+61860499 | MS.gene003006:CDS |
CTGAAGCGCATTCTTCCAGA+TGG | 0.539199 | 2.2:+61859746 | MS.gene003006:CDS |
ATATTTGACGTTCTCAAACA+AGG | 0.544534 | 2.2:+61859968 | MS.gene003006:CDS |
CTTTGTGTCACCAGAAAATG+TGG | 0.546636 | 2.2:+61861417 | MS.gene003006:CDS |
TGCAATTCTTACGGCAAAAG+GGG | 0.547428 | 2.2:-61858794 | None:intergenic |
TGGTTGTGGTGGCTGTGTGA+TGG | 0.547809 | 2.2:+61859721 | MS.gene003006:CDS |
GAGATTGAAGCCAAAATACA+AGG | 0.547821 | 2.2:+61859066 | MS.gene003006:CDS |
ACTTGGTGAGGGCATCCAGC+AGG | 0.549347 | 2.2:-61861242 | None:intergenic |
AATGTTATAAGGCCTGACTT+AGG | 0.554124 | 2.2:+61860451 | MS.gene003006:CDS |
TTCTTTGAAGGTTATAAAGA+GGG | 0.554859 | 2.2:+61860253 | MS.gene003006:CDS |
TTCCAAGAGTATTGGAGGAA+CGG | 0.556361 | 2.2:+61859932 | MS.gene003006:CDS |
TATTTGACGTTCTCAAACAA+GGG | 0.560423 | 2.2:+61859969 | MS.gene003006:CDS |
ACAACTAAGGCATATTTCAA+AGG | 0.561651 | 2.2:-61859495 | None:intergenic |
CCAAAAGAACTAAGTGGTTG+TGG | 0.565999 | 2.2:+61859707 | MS.gene003006:CDS |
AATGCTCTCCAAGTAACCAT+TGG | 0.575828 | 2.2:-61860010 | None:intergenic |
TGAAACTTCATTTCAAAGCG+TGG | 0.577340 | 2.2:-61859548 | None:intergenic |
TGATTGCTTGGCTAGTTGTG+AGG | 0.579197 | 2.2:+61860090 | MS.gene003006:CDS |
TAACAACTTGGTCAACAGCA+TGG | 0.580070 | 2.2:-61861642 | None:intergenic |
AGATGCTCAAGCTAAAAGAC+TGG | 0.588373 | 2.2:+61860302 | MS.gene003006:CDS |
AAATGGAATGTGAATAGTGA+TGG | 0.595578 | 2.2:+61859668 | MS.gene003006:CDS |
TTGGTGGCAACTTTGCAGCA+AGG | 0.598809 | 2.2:-61860429 | None:intergenic |
AACGGATAAACTCGTCACAA+TGG | 0.599920 | 2.2:-61860360 | None:intergenic |
AAAGATACATCAGAAACAGC+TGG | 0.604136 | 2.2:+61860823 | MS.gene003006:CDS |
GGTATCTCAATCTCTGAACA+TGG | 0.604496 | 2.2:-61859180 | None:intergenic |
GAAGCAGTATTTATACCTGC+TGG | 0.606997 | 2.2:+61861227 | MS.gene003006:CDS |
TAAGGTCACTTGACATCTGA+CGG | 0.610508 | 2.2:-61859889 | None:intergenic |
TATCTCCAATTGACATATTG+GGG | 0.611778 | 2.2:-61858758 | None:intergenic |
TATGGAACCAGAGAAGAGCT+TGG | 0.615802 | 2.2:+61860493 | MS.gene003006:CDS |
TGTGATACAAGTAATTTAGA+GGG | 0.619079 | 2.2:+61859626 | MS.gene003006:CDS |
AAAACAAAAGAATGTTGAGA+CGG | 0.619556 | 2.2:+61859829 | MS.gene003006:CDS |
AGTTTCTGCTCAAAAGTCAA+AGG | 0.620576 | 2.2:-61861200 | None:intergenic |
TTTGTACAAGATACAAATTG+TGG | 0.620905 | 2.2:-61858577 | None:intergenic |
TGAGCATAAGAAGAAGCTAG+AGG | 0.629510 | 2.2:+61861077 | MS.gene003006:CDS |
TCACCAAGTGAGAAATCTGA+AGG | 0.633939 | 2.2:+61861256 | MS.gene003006:CDS |
ATCAGTGCTTGAGAAAGGAT+AGG | 0.639946 | 2.2:+61858554 | MS.gene003006:CDS |
CCATTGTGATATTGCAGACG+CGG | 0.646331 | 2.2:+61860540 | MS.gene003006:CDS |
AGCGCATTCTTCCAGATGGG+AGG | 0.648445 | 2.2:+61859750 | MS.gene003006:CDS |
ACTCTTGAAATGGCAAACAA+CGG | 0.653289 | 2.2:-61860378 | None:intergenic |
TGAAGCGCATTCTTCCAGAT+GGG | 0.654134 | 2.2:+61859747 | MS.gene003006:CDS |
ATACGCTCCTTATCATGACA+TGG | 0.656480 | 2.2:-61859210 | None:intergenic |
TGTGCTCCAAAAGAACTAAG+TGG | 0.662822 | 2.2:+61859701 | MS.gene003006:CDS |
AGGTTGAGAATTCCAGCTCG+AGG | 0.678355 | 2.2:-61860409 | None:intergenic |
CCGCGTCTGCAATATCACAA+TGG | 0.685598 | 2.2:-61860540 | None:intergenic |
GGTCTTGTTCAAGATAATGG+AGG | 0.690295 | 2.2:+61860775 | MS.gene003006:CDS |
TGTTGCAAAGAAATACGCAA+CGG | 0.692822 | 2.2:+61859515 | MS.gene003006:CDS |
AGAGGTGATGAATACATGCA+TGG | 0.707440 | 2.2:+61859581 | MS.gene003006:CDS |
AAAGAACTAAGTGGTTGTGG+TGG | 0.708511 | 2.2:+61859710 | MS.gene003006:CDS |
ATAAACTCGTCACAATGGCG+CGG | 0.715284 | 2.2:-61860355 | None:intergenic |
TCGACTTCCTAAGAATCACA+GGG | 0.715729 | 2.2:+61861471 | MS.gene003006:CDS |
CAATTGGAGATATCGCAGAG+AGG | 0.732707 | 2.2:+61858769 | MS.gene003006:CDS |
GGCAAGAGAAGACAAACTTG+AGG | 0.737690 | 2.2:+61861492 | MS.gene003006:CDS |
AAATTGGTAACAAAAGCTCG+CGG | 0.750601 | 2.2:+61859779 | MS.gene003006:CDS |
GGTGATGAATACATGCATGG+TGG | 0.798300 | 2.2:+61859584 | MS.gene003006:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTATTGTGTTTATTTAT+GGG | + | chr2.2:61861572-61861591 | MS.gene003006:intron | 10.0% |
!! | TTAATTATTGTGTTTATTTA+TGG | + | chr2.2:61861571-61861590 | MS.gene003006:intron | 10.0% |
!! | TTATAAAGAGAAATAAATAT+TGG | - | chr2.2:61860202-61860221 | None:intergenic | 10.0% |
!! | AATTATTGTGTTTATTTATG+GGG | + | chr2.2:61861573-61861592 | MS.gene003006:intron | 15.0% |
!! | AATTTGTGTTAAATAATTAC+AGG | + | chr2.2:61858504-61858523 | MS.gene003006:intron | 15.0% |
!! | GTAGTAAATTAATCATATAT+CGG | - | chr2.2:61859002-61859021 | None:intergenic | 15.0% |
!!! | TCTTTTGTATTTTGTTTTTT+TGG | + | chr2.2:61859414-61859433 | MS.gene003006:intron | 15.0% |
!! | AAATGATAATTCAAATGTAC+AGG | + | chr2.2:61860063-61860082 | MS.gene003006:CDS | 20.0% |
!! | AAGTTTCAATACAAAAATAG+AGG | + | chr2.2:61859563-61859582 | MS.gene003006:CDS | 20.0% |
!! | ATTATTGTGTTTATTTATGG+GGG | + | chr2.2:61861574-61861593 | MS.gene003006:intron | 20.0% |
!! | CAAAAGTCAAATAAAAACAT+TGG | - | chr2.2:61861059-61861078 | None:intergenic | 20.0% |
!! | CATTAGAGAAACAAATTTAA+GGG | - | chr2.2:61858883-61858902 | None:intergenic | 20.0% |
!! | GAAGAAGATATAAAAATTTC+TGG | + | chr2.2:61860275-61860294 | MS.gene003006:CDS | 20.0% |
!! | TAACAATAAACTCTCATATT+AGG | + | chr2.2:61859153-61859172 | MS.gene003006:intron | 20.0% |
!! | TCATTAGAGAAACAAATTTA+AGG | - | chr2.2:61858884-61858903 | None:intergenic | 20.0% |
!!! | AAAAATAAAAAGAGCACATA+AGG | + | chr2.2:61860735-61860754 | MS.gene003006:CDS | 20.0% |
!!! | ACATGTTTTGATATTTTGTT+TGG | - | chr2.2:61858533-61858552 | None:intergenic | 20.0% |
!!! | GTTTAAGATGTATTAAAGAT+TGG | + | chr2.2:61858617-61858636 | MS.gene003006:CDS | 20.0% |
!!! | TAAATAGCTTTTTTCCTATA+AGG | - | chr2.2:61859910-61859929 | None:intergenic | 20.0% |
!!! | TAAATTTTCCAAACTATTAC+TGG | + | chr2.2:61859316-61859335 | MS.gene003006:intron | 20.0% |
!!! | TAATAAAATACCTCTTTTAC+TGG | - | chr2.2:61860943-61860962 | None:intergenic | 20.0% |
!!! | TATTGTTCAATAATTTTGAC+AGG | + | chr2.2:61860651-61860670 | MS.gene003006:intron | 20.0% |
!!! | TATTTAAATTCCAAGAGTAT+TGG | + | chr2.2:61859924-61859943 | MS.gene003006:CDS | 20.0% |
!!! | TCACATATAATCAACATTTT+CGG | + | chr2.2:61860963-61860982 | MS.gene003006:intron | 20.0% |
!!! | TTTTTTTCATTTTTGCACAT+AGG | + | chr2.2:61858733-61858752 | MS.gene003006:intron | 20.0% |
! | AAAACAAAAGAATGTTGAGA+CGG | + | chr2.2:61859829-61859848 | MS.gene003006:CDS | 25.0% |
! | AACCAAAATAGTTGTCATAA+AGG | - | chr2.2:61858461-61858480 | None:intergenic | 25.0% |
! | ATAAGTATGCCTAAATTCTT+TGG | - | chr2.2:61860914-61860933 | None:intergenic | 25.0% |
! | ATATCTCCAATTGACATATT+GGG | - | chr2.2:61858762-61858781 | None:intergenic | 25.0% |
! | ATATGAGAGTTTATTGTTAG+TGG | - | chr2.2:61859152-61859171 | None:intergenic | 25.0% |
! | ATGTTGAGATATTTACCAAA+TGG | + | chr2.2:61859651-61859670 | MS.gene003006:CDS | 25.0% |
! | CAAGATTCTTAATCAATTAC+AGG | + | chr2.2:61861170-61861189 | MS.gene003006:intron | 25.0% |
! | CACAATAATTAAGCAAAGTT+TGG | - | chr2.2:61861563-61861582 | None:intergenic | 25.0% |
! | CATATTTCAAAGGAACATTT+AGG | - | chr2.2:61859488-61859507 | None:intergenic | 25.0% |
! | TAAAAACATTGGTCATGAAT+AGG | - | chr2.2:61861048-61861067 | None:intergenic | 25.0% |
! | TATTAACAAATATGTGACCT+TGG | - | chr2.2:61858673-61858692 | None:intergenic | 25.0% |
! | TCAAAAATTAAGCAAAGAGA+TGG | - | chr2.2:61859027-61859046 | None:intergenic | 25.0% |
! | TGCAACATAGTAAGTATAAA+AGG | - | chr2.2:61859261-61859280 | None:intergenic | 25.0% |
! | TGTGATACAAGTAATTTAGA+GGG | + | chr2.2:61859626-61859645 | MS.gene003006:CDS | 25.0% |
! | TTACTTGTATCACAAGTTAT+TGG | - | chr2.2:61859620-61859639 | None:intergenic | 25.0% |
! | TTGTGATACAAGTAATTTAG+AGG | + | chr2.2:61859625-61859644 | MS.gene003006:CDS | 25.0% |
! | TTTCAATTTCAACGCTATAT+TGG | + | chr2.2:61860595-61860614 | MS.gene003006:intron | 25.0% |
! | TTTCGTAGTTAAATTTCCTT+TGG | + | chr2.2:61860118-61860137 | MS.gene003006:intron | 25.0% |
! | TTTGTACAAGATACAAATTG+TGG | - | chr2.2:61858580-61858599 | None:intergenic | 25.0% |
!! | ACATTTTCAAACTCATCATA+AGG | - | chr2.2:61860331-61860350 | None:intergenic | 25.0% |
!! | GTGATATTTTTCTATGAAAC+AGG | + | chr2.2:61861603-61861622 | MS.gene003006:intron | 25.0% |
!! | TGAAGTTATACCTTGTATTT+TGG | - | chr2.2:61859079-61859098 | None:intergenic | 25.0% |
!! | TTCCTTTATGACAACTATTT+TGG | + | chr2.2:61858456-61858475 | MS.gene003006:intron | 25.0% |
!! | TTCTTTGAAGGTTATAAAGA+GGG | + | chr2.2:61860253-61860272 | MS.gene003006:CDS | 25.0% |
!!! | ACATACATGTACTTTTAAAG+AGG | - | chr2.2:61861305-61861324 | None:intergenic | 25.0% |
!!! | TATTTTGACTCATATAACTG+AGG | + | chr2.2:61860678-61860697 | MS.gene003006:CDS | 25.0% |
AAAGAATTGGAAGCTTTCAT+TGG | + | chr2.2:61861664-61861683 | MS.gene003006:CDS | 30.0% | |
AAATGGAATGTGAATAGTGA+TGG | + | chr2.2:61859668-61859687 | MS.gene003006:CDS | 30.0% | |
AACCTAAGAAACAAAGAAGT+TGG | - | chr2.2:61861019-61861038 | None:intergenic | 30.0% | |
AATGTTTGCTTGTGTTCAAA+AGG | + | chr2.2:61858822-61858841 | MS.gene003006:CDS | 30.0% | |
ACAACTAAGGCATATTTCAA+AGG | - | chr2.2:61859498-61859517 | None:intergenic | 30.0% | |
ACATCTAAATAACCATTCCA+AGG | + | chr2.2:61858653-61858672 | MS.gene003006:intron | 30.0% | |
AGAACGTCAAATATTAGAAC+AGG | - | chr2.2:61859962-61859981 | None:intergenic | 30.0% | |
ATATTTGACGTTCTCAAACA+AGG | + | chr2.2:61859968-61859987 | MS.gene003006:CDS | 30.0% | |
ATCACTATTCACATTCCATT+TGG | - | chr2.2:61859669-61859688 | None:intergenic | 30.0% | |
CATTGCAATTGCAATTCTTA+CGG | - | chr2.2:61858806-61858825 | None:intergenic | 30.0% | |
CCAAAAACTTACATTGCTTA+TGG | + | chr2.2:61860475-61860494 | MS.gene003006:CDS | 30.0% | |
CTTCCAATTCTTTAACAACT+TGG | - | chr2.2:61861657-61861676 | None:intergenic | 30.0% | |
CTTTATAACCTTCAAAGAAC+TGG | - | chr2.2:61860252-61860271 | None:intergenic | 30.0% | |
GAAAACACTCCAAAGAATTT+AGG | + | chr2.2:61860902-61860921 | MS.gene003006:CDS | 30.0% | |
GATATCTCCAATTGACATAT+TGG | - | chr2.2:61858763-61858782 | None:intergenic | 30.0% | |
GTATTTCTTTGCAACAACTA+AGG | - | chr2.2:61859511-61859530 | None:intergenic | 30.0% | |
TATCTCCAATTGACATATTG+GGG | - | chr2.2:61858761-61858780 | None:intergenic | 30.0% | |
TATTTGACGTTCTCAAACAA+GGG | + | chr2.2:61859969-61859988 | MS.gene003006:CDS | 30.0% | |
TGACCAAGTTGTTAAAGAAT+TGG | + | chr2.2:61861651-61861670 | MS.gene003006:CDS | 30.0% | |
TGGAATTCACATCAAAAGAA+AGG | - | chr2.2:61861543-61861562 | None:intergenic | 30.0% | |
TTATTGTTCTCCAGTAAAAG+AGG | + | chr2.2:61860930-61860949 | MS.gene003006:CDS | 30.0% | |
TTCTCTTTATAAACCTTTGC+AGG | + | chr2.2:61860210-61860229 | MS.gene003006:intron | 30.0% | |
! | ATGCATATATCCACATTTTC+TGG | - | chr2.2:61861430-61861449 | None:intergenic | 30.0% |
! | ATTTAGGACAGCTTCTATAA+AGG | - | chr2.2:61859472-61859491 | None:intergenic | 30.0% |
! | CCATAAGCAATGTAAGTTTT+TGG | - | chr2.2:61860478-61860497 | None:intergenic | 30.0% |
! | GTATCTTTTGTGATAGATGA+TGG | - | chr2.2:61860811-61860830 | None:intergenic | 30.0% |
! | GTTCTTTGAAGGTTATAAAG+AGG | + | chr2.2:61860252-61860271 | MS.gene003006:CDS | 30.0% |
! | TTTTCAAACTCATCATAAGG+TGG | - | chr2.2:61860328-61860347 | None:intergenic | 30.0% |
!! | TTAAATTCCAAGAGTATTGG+AGG | + | chr2.2:61859927-61859946 | MS.gene003006:CDS | 30.0% |
AAAGATACATCAGAAACAGC+TGG | + | chr2.2:61860823-61860842 | MS.gene003006:CDS | 35.0% | |
AATGTTATAAGGCCTGACTT+AGG | + | chr2.2:61860451-61860470 | MS.gene003006:CDS | 35.0% | |
AATTTAGATATCCTCCCATC+TGG | - | chr2.2:61859764-61859783 | None:intergenic | 35.0% | |
ACAAACTCCATGTCATGATA+AGG | + | chr2.2:61859203-61859222 | MS.gene003006:CDS | 35.0% | |
ACAAATATGTGACCTTGGAA+TGG | - | chr2.2:61858668-61858687 | None:intergenic | 35.0% | |
ACTCTTGAAATGGCAAACAA+CGG | - | chr2.2:61860381-61860400 | None:intergenic | 35.0% | |
ACTTTGCAGTATCTTCTCTT+CGG | - | chr2.2:61860867-61860886 | None:intergenic | 35.0% | |
AGATGGGAGGATATCTAAAT+TGG | + | chr2.2:61859763-61859782 | MS.gene003006:CDS | 35.0% | |
AGTTGCCACCAAATGTTATA+AGG | + | chr2.2:61860440-61860459 | MS.gene003006:CDS | 35.0% | |
AGTTTCTGCTCAAAAGTCAA+AGG | - | chr2.2:61861203-61861222 | None:intergenic | 35.0% | |
ATTGCAATTCTTACGGCAAA+AGG | - | chr2.2:61858799-61858818 | None:intergenic | 35.0% | |
CGTCAATACCAGTAATAGTT+TGG | - | chr2.2:61859327-61859346 | None:intergenic | 35.0% | |
GAGATTGAAGCCAAAATACA+AGG | + | chr2.2:61859066-61859085 | MS.gene003006:CDS | 35.0% | |
GTATCACAAGTTATTGGTAG+AGG | - | chr2.2:61859614-61859633 | None:intergenic | 35.0% | |
GTGTTCAAAAGGAATGATCA+AGG | + | chr2.2:61858833-61858852 | MS.gene003006:CDS | 35.0% | |
TGAAACTTCATTTCAAAGCG+TGG | - | chr2.2:61859551-61859570 | None:intergenic | 35.0% | |
TGTTGCAAAGAAATACGCAA+CGG | + | chr2.2:61859515-61859534 | MS.gene003006:CDS | 35.0% | |
TTATCATGACATGGAGTTTG+TGG | - | chr2.2:61859204-61859223 | None:intergenic | 35.0% | |
TTGCAATTCTTACGGCAAAA+GGG | - | chr2.2:61858798-61858817 | None:intergenic | 35.0% | |
! | AAATTGGTAACAAAAGCTCG+CGG | + | chr2.2:61859779-61859798 | MS.gene003006:CDS | 35.0% |
! | AAGTCAGGCCTTATAACATT+TGG | - | chr2.2:61860451-61860470 | None:intergenic | 35.0% |
! | ATGATAAGGAGCGTATGTAT+TGG | + | chr2.2:61859217-61859236 | MS.gene003006:CDS | 35.0% |
! | CACCAACTTCTTTGTTTCTT+AGG | + | chr2.2:61861014-61861033 | MS.gene003006:intron | 35.0% |
! | GTGTCAATTTTTACCTGCAA+AGG | - | chr2.2:61860226-61860245 | None:intergenic | 35.0% |
! | TTGACTTTTGAGCAGAAACT+TGG | + | chr2.2:61861203-61861222 | MS.gene003006:CDS | 35.0% |
!! | GAAGGTCTTGTTCAAGATAA+TGG | + | chr2.2:61860772-61860791 | MS.gene003006:CDS | 35.0% |
!! | TAAGTTTTTGGACCTAAGTC+AGG | - | chr2.2:61860466-61860485 | None:intergenic | 35.0% |
AAAGAACTAAGTGGTTGTGG+TGG | + | chr2.2:61859710-61859729 | MS.gene003006:CDS | 40.0% | |
AACGGATAAACTCGTCACAA+TGG | - | chr2.2:61860363-61860382 | None:intergenic | 40.0% | |
AAGAAGCTAGAGGAAGAGTT+TGG | + | chr2.2:61861087-61861106 | MS.gene003006:CDS | 40.0% | |
AATGCTCTCCAAGTAACCAT+TGG | - | chr2.2:61860013-61860032 | None:intergenic | 40.0% | |
ACACCTTCAGATTTCTCACT+TGG | - | chr2.2:61861262-61861281 | None:intergenic | 40.0% | |
AGAGGTGATGAATACATGCA+TGG | + | chr2.2:61859581-61859600 | MS.gene003006:CDS | 40.0% | |
AGATGCTCAAGCTAAAAGAC+TGG | + | chr2.2:61860302-61860321 | MS.gene003006:CDS | 40.0% | |
AGCACATAAGGCTCAAGATA+GGG | + | chr2.2:61860747-61860766 | MS.gene003006:CDS | 40.0% | |
AGGTACCCCAATATGTCAAT+TGG | + | chr2.2:61858753-61858772 | MS.gene003006:intron | 40.0% | |
ATACGCTCCTTATCATGACA+TGG | - | chr2.2:61859213-61859232 | None:intergenic | 40.0% | |
ATCAGTGCTTGAGAAAGGAT+AGG | + | chr2.2:61858554-61858573 | MS.gene003006:CDS | 40.0% | |
ATGTCATCAGTGCTTGAGAA+AGG | + | chr2.2:61858549-61858568 | MS.gene003006:CDS | 40.0% | |
CAGATGTCAAGTGACCTTAT+AGG | + | chr2.2:61859893-61859912 | MS.gene003006:CDS | 40.0% | |
CCAAAAGAACTAAGTGGTTG+TGG | + | chr2.2:61859707-61859726 | MS.gene003006:CDS | 40.0% | |
CTTTGTGTCACCAGAAAATG+TGG | + | chr2.2:61861417-61861436 | MS.gene003006:CDS | 40.0% | |
GAAGCAGTATTTATACCTGC+TGG | + | chr2.2:61861227-61861246 | MS.gene003006:CDS | 40.0% | |
GGATCGCAATACTCTTGAAA+TGG | - | chr2.2:61860391-61860410 | None:intergenic | 40.0% | |
GGTATCTCAATCTCTGAACA+TGG | - | chr2.2:61859183-61859202 | None:intergenic | 40.0% | |
GTAAGAACGAACATCACCAA+AGG | - | chr2.2:61860137-61860156 | None:intergenic | 40.0% | |
TAACAACTTGGTCAACAGCA+TGG | - | chr2.2:61861645-61861664 | None:intergenic | 40.0% | |
TAAGGTCACTTGACATCTGA+CGG | - | chr2.2:61859892-61859911 | None:intergenic | 40.0% | |
TCACCAAGTGAGAAATCTGA+AGG | + | chr2.2:61861256-61861275 | MS.gene003006:CDS | 40.0% | |
TCGACTTCCTAAGAATCACA+GGG | + | chr2.2:61861471-61861490 | MS.gene003006:CDS | 40.0% | |
TGAGCATAAGAAGAAGCTAG+AGG | + | chr2.2:61861077-61861096 | MS.gene003006:CDS | 40.0% | |
TGCAATTCTTACGGCAAAAG+GGG | - | chr2.2:61858797-61858816 | None:intergenic | 40.0% | |
TGTGCTCCAAAAGAACTAAG+TGG | + | chr2.2:61859701-61859720 | MS.gene003006:CDS | 40.0% | |
TTGGTGCGACAAGTATAAGA+TGG | + | chr2.2:61860614-61860633 | MS.gene003006:intron | 40.0% | |
! | GTGATAGATGATGGCACAAA+AGG | - | chr2.2:61860802-61860821 | None:intergenic | 40.0% |
! | TCAGATTTCTCACTTGGTGA+GGG | - | chr2.2:61861256-61861275 | None:intergenic | 40.0% |
! | TCAGGCCTTATAACATTTGG+TGG | - | chr2.2:61860448-61860467 | None:intergenic | 40.0% |
! | TGTACAGGCTATTGATTGCT+TGG | + | chr2.2:61860078-61860097 | MS.gene003006:CDS | 40.0% |
! | TTCAGATTTCTCACTTGGTG+AGG | - | chr2.2:61861257-61861276 | None:intergenic | 40.0% |
!! | CCACAACCACTTAGTTCTTT+TGG | - | chr2.2:61859710-61859729 | None:intergenic | 40.0% |
!! | GGTCTTGTTCAAGATAATGG+AGG | + | chr2.2:61860775-61860794 | MS.gene003006:CDS | 40.0% |
!! | TTCCAAGAGTATTGGAGGAA+CGG | + | chr2.2:61859932-61859951 | MS.gene003006:CDS | 40.0% |
!!! | TCTTTTAGCTTGAGCATCTC+TGG | - | chr2.2:61860301-61860320 | None:intergenic | 40.0% |
AACAAGGGACAGGATTGAGT+TGG | + | chr2.2:61859984-61860003 | MS.gene003006:CDS | 45.0% | |
AAGGCTCAAGATAGGGAAGA+AGG | + | chr2.2:61860754-61860773 | MS.gene003006:CDS | 45.0% | |
ACAAGGGACAGGATTGAGTT+GGG | + | chr2.2:61859985-61860004 | MS.gene003006:CDS | 45.0% | |
AGAAACAGCTGGTGCACTTT+GGG | + | chr2.2:61860834-61860853 | MS.gene003006:CDS | 45.0% | |
ATAAACTCGTCACAATGGCG+CGG | - | chr2.2:61860358-61860377 | None:intergenic | 45.0% | |
CAATTGGAGATATCGCAGAG+AGG | + | chr2.2:61858769-61858788 | MS.gene003006:CDS | 45.0% | |
CCATTGTGATATTGCAGACG+CGG | + | chr2.2:61860540-61860559 | MS.gene003006:CDS | 45.0% | |
GAGCACATAAGGCTCAAGAT+AGG | + | chr2.2:61860746-61860765 | MS.gene003006:CDS | 45.0% | |
GGCAAGAGAAGACAAACTTG+AGG | + | chr2.2:61861492-61861511 | MS.gene003006:CDS | 45.0% | |
GGTGATGAATACATGCATGG+TGG | + | chr2.2:61859584-61859603 | MS.gene003006:CDS | 45.0% | |
TATGGAACCAGAGAAGAGCT+TGG | + | chr2.2:61860493-61860512 | MS.gene003006:CDS | 45.0% | |
TCTCTTGCCCTGTGATTCTT+AGG | - | chr2.2:61861481-61861500 | None:intergenic | 45.0% | |
TGAAGCGCATTCTTCCAGAT+GGG | + | chr2.2:61859747-61859766 | MS.gene003006:CDS | 45.0% | |
! | GTCGACTTCCTAAGAATCAC+AGG | + | chr2.2:61861470-61861489 | MS.gene003006:CDS | 45.0% |
! | TGATTGCTTGGCTAGTTGTG+AGG | + | chr2.2:61860090-61860109 | MS.gene003006:CDS | 45.0% |
AGGTTGAGAATTCCAGCTCG+AGG | - | chr2.2:61860412-61860431 | None:intergenic | 50.0% | |
CACCGTTCCTCCAATACTCT+TGG | - | chr2.2:61859937-61859956 | None:intergenic | 50.0% | |
CAGAAACAGCTGGTGCACTT+TGG | + | chr2.2:61860833-61860852 | MS.gene003006:CDS | 50.0% | |
CCGCGTCTGCAATATCACAA+TGG | - | chr2.2:61860543-61860562 | None:intergenic | 50.0% | |
CTGAAGCGCATTCTTCCAGA+TGG | + | chr2.2:61859746-61859765 | MS.gene003006:CDS | 50.0% | |
GACACTCGCCAGTTCTTTGA+AGG | + | chr2.2:61860241-61860260 | MS.gene003006:CDS | 50.0% | |
GACGTTCTCAAACAAGGGAC+AGG | + | chr2.2:61859974-61859993 | MS.gene003006:CDS | 50.0% | |
GTTGGGAGCCAATGGTTACT+TGG | + | chr2.2:61860002-61860021 | MS.gene003006:CDS | 50.0% | |
! | TTGGTGGCAACTTTGCAGCA+AGG | - | chr2.2:61860432-61860451 | None:intergenic | 50.0% |
!! | AGGATTGAGTTGGGAGCCAA+TGG | + | chr2.2:61859994-61860013 | MS.gene003006:CDS | 50.0% |
ACCAGAGAAGAGCTTGGCAG+AGG | + | chr2.2:61860499-61860518 | MS.gene003006:CDS | 55.0% | |
AGCGCATTCTTCCAGATGGG+AGG | + | chr2.2:61859750-61859769 | MS.gene003006:CDS | 55.0% | |
TCCTCTGCCAAGCTCTTCTC+TGG | - | chr2.2:61860503-61860522 | None:intergenic | 55.0% | |
TGGTTGTGGTGGCTGTGTGA+TGG | + | chr2.2:61859721-61859740 | MS.gene003006:CDS | 55.0% | |
! | GAGTATTGCGATCCTCGAGC+TGG | + | chr2.2:61860397-61860416 | MS.gene003006:CDS | 55.0% |
!! | ACTTGGTGAGGGCATCCAGC+AGG | - | chr2.2:61861245-61861264 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 61858410 | 61861705 | 61858410 | ID=MS.gene003006 |
chr2.2 | mRNA | 61858410 | 61861705 | 61858410 | ID=MS.gene003006.t1;Parent=MS.gene003006 |
chr2.2 | exon | 61858410 | 61858427 | 61858410 | ID=MS.gene003006.t1.exon1;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61858410 | 61858427 | 61858410 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
chr2.2 | exon | 61858526 | 61858638 | 61858526 | ID=MS.gene003006.t1.exon2;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61858526 | 61858638 | 61858526 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
chr2.2 | exon | 61858755 | 61858854 | 61858755 | ID=MS.gene003006.t1.exon3;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61858755 | 61858854 | 61858755 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
chr2.2 | exon | 61858955 | 61859087 | 61858955 | ID=MS.gene003006.t1.exon4;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61858955 | 61859087 | 61858955 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
chr2.2 | exon | 61859175 | 61859238 | 61859175 | ID=MS.gene003006.t1.exon5;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61859175 | 61859238 | 61859175 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
chr2.2 | exon | 61859442 | 61860111 | 61859442 | ID=MS.gene003006.t1.exon6;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61859442 | 61860111 | 61859442 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
chr2.2 | exon | 61860232 | 61860561 | 61860232 | ID=MS.gene003006.t1.exon7;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61860232 | 61860561 | 61860232 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
chr2.2 | exon | 61860673 | 61860951 | 61860673 | ID=MS.gene003006.t1.exon8;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61860673 | 61860951 | 61860673 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
chr2.2 | exon | 61861036 | 61861108 | 61861036 | ID=MS.gene003006.t1.exon9;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61861036 | 61861108 | 61861036 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
chr2.2 | exon | 61861192 | 61861277 | 61861192 | ID=MS.gene003006.t1.exon10;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61861192 | 61861277 | 61861192 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
chr2.2 | exon | 61861394 | 61861513 | 61861394 | ID=MS.gene003006.t1.exon11;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61861394 | 61861513 | 61861394 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
chr2.2 | exon | 61861625 | 61861705 | 61861625 | ID=MS.gene003006.t1.exon12;Parent=MS.gene003006.t1 |
chr2.2 | CDS | 61861625 | 61861705 | 61861625 | ID=cds.MS.gene003006.t1;Parent=MS.gene003006.t1 |
Gene Sequence |
Protein sequence |