AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003012

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003012.t1 MTR_2g024380 88.462 312 36 0 245 556 159 470 0.0 583
MS.gene003012.t1 MTR_2g024380 75.319 235 48 2 1 235 1 225 1.85e-90 286
MS.gene003012.t1 MTR_2g024350 89.427 227 24 0 330 556 1 227 4.81e-150 430
MS.gene003012.t1 MTR_6g053200 40.752 319 157 7 255 556 233 536 1.17e-68 231
MS.gene003012.t1 MTR_6g053200 50.000 96 42 1 1 90 1 96 2.42e-15 79.3
MS.gene003012.t1 MTR_7g104980 51.759 199 95 1 358 556 18 215 3.56e-55 185
MS.gene003012.t1 MTR_8g067635 35.925 373 162 7 171 469 135 504 1.00e-54 193
MS.gene003012.t1 MTR_8g067650 36.228 334 142 6 253 555 226 519 6.18e-54 191
MS.gene003012.t1 MTR_8g069935 44.134 179 70 1 256 404 220 398 1.37e-40 153
MS.gene003012.t1 MTR_1g099600 53.465 101 45 2 315 415 164 262 1.65e-30 121
MS.gene003012.t1 MTR_7g079040 37.017 181 105 5 305 478 122 300 4.06e-27 112
MS.gene003012.t1 MTR_8g028565 48.039 102 50 2 316 415 134 234 8.41e-26 108
MS.gene003012.t1 MTR_7g105000 33.921 227 92 4 179 357 124 340 2.01e-24 105
MS.gene003012.t1 MTR_7g105000 55.952 84 36 1 1 84 1 83 6.29e-13 70.9
MS.gene003012.t1 MTR_1g070455 65.079 63 22 0 334 396 290 352 7.59e-24 103
MS.gene003012.t1 MTR_2g033110 65.049 103 31 2 1 98 1 103 3.00e-23 98.2
MS.gene003012.t1 MTR_2g032030 37.778 135 70 3 288 409 205 338 3.13e-23 102
MS.gene003012.t1 MTR_2g032030 37.778 135 70 3 288 409 205 338 5.97e-23 102
MS.gene003012.t1 MTR_4g127040 38.655 119 55 2 278 396 204 304 2.47e-22 98.2
MS.gene003012.t1 MTR_3g108960 48.193 83 42 1 313 394 289 371 4.93e-22 99.0
MS.gene003012.t1 MTR_8g087000 52.703 74 35 0 336 409 76 149 5.01e-22 95.9
MS.gene003012.t1 MTR_4g094908 47.674 86 42 1 313 395 239 324 5.59e-22 97.8
MS.gene003012.t1 MTR_8g087000 52.703 74 35 0 336 409 75 148 7.49e-22 95.1
MS.gene003012.t1 MTR_5g016610 56.061 66 29 0 330 395 192 257 9.83e-22 95.5
MS.gene003012.t1 MTR_8g098945 54.795 73 32 1 338 410 130 201 1.08e-21 95.5
MS.gene003012.t1 MTR_7g109600 45.652 92 43 1 315 399 24 115 2.76e-21 94.4
MS.gene003012.t1 MTR_4g052030 71.186 59 5 1 337 395 5 51 3.35e-21 87.4
MS.gene003012.t1 MTR_1g009613 43.363 113 56 2 286 394 211 319 6.63e-21 94.7
MS.gene003012.t1 MTR_2g016770 47.253 91 44 1 311 397 5 95 1.18e-20 91.3
MS.gene003012.t1 MTR_2g083870 59.677 62 25 0 336 397 79 140 1.52e-20 92.0
MS.gene003012.t1 MTR_2g016770 59.677 62 25 0 336 397 26 87 1.66e-20 90.5
MS.gene003012.t1 MTR_0117s0040 56.250 64 28 0 331 394 68 131 7.45e-20 89.7
MS.gene003012.t1 MTR_2g045360 34.646 127 77 1 282 408 162 282 5.81e-18 87.0
MS.gene003012.t1 MTR_3g053330 50.000 60 30 0 338 397 252 311 4.63e-17 84.3
MS.gene003012.t1 MTR_1g086790 41.111 90 51 2 317 406 139 226 3.44e-16 80.1
MS.gene003012.t1 MTR_3g106060 50.847 59 29 0 337 395 138 196 6.22e-16 79.0
MS.gene003012.t1 MTR_4g094588 46.753 77 39 2 323 399 165 239 1.28e-15 78.6
MS.gene003012.t1 MTR_7g110720 49.206 63 32 0 335 397 214 276 2.14e-15 79.0
MS.gene003012.t1 MTR_7g100510 48.276 87 43 2 322 408 174 258 2.26e-15 79.0
MS.gene003012.t1 MTR_7g100510 46.377 69 36 1 332 400 356 423 1.14e-14 76.6
MS.gene003012.t1 MTR_3g056100 52.308 65 30 1 338 402 416 479 2.49e-15 79.3
MS.gene003012.t1 MTR_3g056100 52.308 65 30 1 338 402 403 466 2.59e-15 79.3
MS.gene003012.t1 MTR_7g110720 49.206 63 32 0 335 397 187 249 2.62e-15 78.6
MS.gene003012.t1 MTR_4g082580 49.296 71 35 1 332 402 273 342 2.66e-15 78.2
MS.gene003012.t1 MTR_4g082580 39.796 98 47 3 333 421 141 235 4.18e-11 65.5
MS.gene003012.t1 MTR_2g088000 46.479 71 38 0 338 408 350 420 2.71e-15 79.3
MS.gene003012.t1 MTR_3g056100 52.308 65 30 1 338 402 259 322 2.98e-15 78.6
MS.gene003012.t1 MTR_3g056100 52.308 65 30 1 338 402 272 335 3.02e-15 78.6
MS.gene003012.t1 MTR_1g013790 47.541 61 32 0 337 397 101 161 3.54e-15 75.9
MS.gene003012.t1 MTR_5g042920 50.725 69 33 1 334 402 317 384 4.38e-15 78.2
MS.gene003012.t1 MTR_5g042920 52.174 69 31 2 333 401 147 213 1.33e-13 73.6
MS.gene003012.t1 MTR_5g094430 45.946 74 39 1 326 399 353 425 4.43e-15 78.6
MS.gene003012.t1 MTR_5g094430 45.946 74 39 1 326 399 241 313 4.92e-15 77.8
MS.gene003012.t1 MTR_5g094430 45.946 74 39 1 326 399 219 291 5.63e-15 77.4
MS.gene003012.t1 MTR_7g011820 53.030 66 30 1 334 399 407 471 5.93e-15 78.2
MS.gene003012.t1 MTR_7g011820 50.704 71 33 2 333 403 224 292 2.06e-14 76.3
MS.gene003012.t1 MTR_3g031220 56.250 64 26 2 338 401 199 260 7.92e-15 77.0
MS.gene003012.t1 MTR_4g132430 48.333 60 31 0 338 397 128 187 8.11e-15 76.6
MS.gene003012.t1 MTR_4g049790 43.023 86 47 2 325 408 298 383 9.30e-15 77.4
MS.gene003012.t1 MTR_4g107970 45.333 75 39 1 325 397 164 238 9.57e-15 77.4
MS.gene003012.t1 MTR_2g023930 48.333 60 31 0 338 397 306 365 9.60e-15 77.4
MS.gene003012.t1 MTR_3g031220 56.250 64 26 2 338 401 199 260 1.08e-14 77.0
MS.gene003012.t1 MTR_3g031220 47.761 67 34 1 332 398 360 425 3.02e-13 72.8
MS.gene003012.t1 MTR_4g049760 45.070 71 39 0 338 408 291 361 1.08e-14 77.4
MS.gene003012.t1 MTR_4g107970 44.156 77 41 1 323 397 239 315 1.42e-14 77.0
MS.gene003012.t1 MTR_4g132430 48.333 60 31 0 338 397 262 321 1.80e-14 76.3
MS.gene003012.t1 MTR_7g080000 43.299 97 48 3 337 433 234 323 1.90e-14 77.0
MS.gene003012.t1 MTR_7g080000 47.059 68 35 1 332 399 427 493 5.46e-13 72.4
MS.gene003012.t1 MTR_3g009470 49.296 71 34 2 337 407 280 348 1.91e-14 77.0
MS.gene003012.t1 MTR_3g009470 51.613 62 29 1 338 399 496 556 1.49e-13 73.9
MS.gene003012.t1 MTR_4g007060 47.541 61 32 0 337 397 128 188 2.33e-14 74.3
MS.gene003012.t1 MTR_5g074400 50.000 68 33 1 332 399 415 481 2.33e-14 76.3
MS.gene003012.t1 MTR_5g074400 56.667 60 24 2 338 397 244 301 2.61e-13 73.2
MS.gene003012.t1 MTR_4g007060 47.541 61 32 0 337 397 162 222 2.53e-14 74.7
MS.gene003012.t1 MTR_3g009470 49.296 71 34 2 337 407 280 348 2.61e-14 75.9
MS.gene003012.t1 MTR_7g080020 51.389 72 33 2 337 408 280 349 2.69e-14 76.6
MS.gene003012.t1 MTR_7g080020 44.156 77 42 1 332 408 488 563 7.51e-14 75.1
MS.gene003012.t1 MTR_5g097490 52.941 68 30 2 333 400 88 153 4.32e-14 74.7
MS.gene003012.t1 MTR_5g097490 50.794 63 30 1 338 400 253 314 1.44e-13 73.2
MS.gene003012.t1 MTR_7g009730 50.877 57 28 0 338 394 220 276 4.86e-14 75.5
MS.gene003012.t1 MTR_7g071120 43.011 93 49 3 309 401 140 228 4.92e-14 75.1
MS.gene003012.t1 MTR_7g071120 39.326 89 53 1 311 399 298 385 1.41e-11 67.4
MS.gene003012.t1 MTR_4g094412 50.000 60 30 0 338 397 235 294 6.20e-14 74.7
MS.gene003012.t1 MTR_4g094412 50.000 60 30 0 338 397 244 303 7.61e-14 74.3
MS.gene003012.t1 MTR_7g062220 46.479 71 35 2 324 394 113 180 2.23e-13 71.6
MS.gene003012.t1 MTR_4g122530 44.262 61 33 1 338 398 209 268 2.25e-13 72.8
MS.gene003012.t1 MTR_4g130900 46.875 64 33 1 338 401 360 422 3.29e-13 72.4
MS.gene003012.t1 MTR_1g013760 37.037 81 50 1 338 418 141 220 4.01e-13 70.5
MS.gene003012.t1 MTR_4g013260 48.438 64 32 1 334 397 333 395 6.76e-13 71.6
MS.gene003012.t1 MTR_4g013260 40.741 81 47 1 321 401 168 247 1.26e-11 67.4
MS.gene003012.t1 MTR_2g105060 45.161 62 34 0 337 398 94 155 7.28e-13 68.9
MS.gene003012.t1 MTR_5g091390 44.444 63 34 1 337 399 157 218 7.50e-13 70.1
MS.gene003012.t1 MTR_3g095040 43.750 64 35 1 334 397 115 177 7.77e-13 68.2
MS.gene003012.t1 MTR_7g109800 38.554 83 48 2 325 405 131 212 8.10e-13 69.7
MS.gene003012.t1 MTR_2g105060 45.161 62 34 0 337 398 169 230 9.37e-13 69.7
MS.gene003012.t1 MTR_3g095080 42.254 71 38 2 327 395 156 225 9.62e-13 68.6
MS.gene003012.t1 MTR_3g095080 42.254 71 38 2 327 395 132 201 1.56e-12 67.4
MS.gene003012.t1 MTR_8g007270 46.875 64 33 1 332 395 149 211 1.62e-12 67.8
MS.gene003012.t1 MTR_1g015140 45.902 61 32 1 334 394 99 158 1.79e-12 65.9
MS.gene003012.t1 MTR_8g092140 43.750 64 35 1 332 395 155 217 1.81e-12 67.8
MS.gene003012.t1 MTR_8g092010 43.750 64 35 1 334 397 105 167 2.06e-12 66.2
MS.gene003012.t1 MTR_5g043880 40.230 87 50 2 308 394 96 180 3.19e-12 67.8
MS.gene003012.t1 MTR_5g067680 49.153 59 28 1 336 392 201 259 3.47e-12 68.6
MS.gene003012.t1 MTR_5g074200 45.055 91 37 5 338 425 221 301 9.59e-12 67.0
MS.gene003012.t1 MTR_7g079010 43.548 62 34 1 333 394 137 197 1.08e-11 65.1
MS.gene003012.t1 MTR_1g077780 46.377 69 36 1 334 402 59 126 2.09e-11 62.4
MS.gene003012.t1 MTR_1g078260 32.500 120 58 4 313 410 209 327 2.72e-11 66.2
MS.gene003012.t1 MTR_7g028415 40.984 61 35 1 334 394 90 149 3.77e-11 62.4
MS.gene003012.t1 MTR_7g028710 40.984 61 35 1 334 394 90 149 3.77e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003012.t1 AT5G52830 52.041 98 45 2 315 412 144 239 1.82e-26 110
MS.gene003012.t1 AT4G01250 48.454 97 49 1 315 411 106 201 1.90e-26 109
MS.gene003012.t1 AT3G04670 46.535 101 44 1 313 403 228 328 3.18e-24 104
MS.gene003012.t1 AT5G28650 45.545 101 45 1 313 403 228 328 7.06e-24 103
MS.gene003012.t1 AT4G31550 47.917 96 43 2 313 403 218 311 9.29e-23 99.8
MS.gene003012.t1 AT2G24570 58.571 70 29 0 334 403 240 309 1.03e-22 99.8
MS.gene003012.t1 AT4G23550 47.253 91 47 1 321 411 124 213 1.71e-22 98.6
MS.gene003012.t1 AT4G31550 57.143 70 30 0 334 403 243 312 2.03e-22 99.0
MS.gene003012.t1 AT2G23320 52.326 86 34 2 315 395 215 298 4.00e-22 97.8
MS.gene003012.t1 AT4G24240 49.495 99 43 2 302 395 243 339 6.74e-22 97.8
MS.gene003012.t1 AT2G34830 44.444 99 45 2 317 406 186 283 7.20e-22 99.0
MS.gene003012.t1 AT2G34830 44.444 99 45 2 317 406 195 292 8.46e-22 98.6
MS.gene003012.t1 AT2G30590 48.936 94 38 2 313 396 279 372 1.51e-21 97.1
MS.gene003012.t1 AT1G30650 37.500 136 70 4 281 406 155 285 5.65e-21 96.3
MS.gene003012.t1 AT5G45050 46.667 90 47 1 317 406 1160 1248 6.18e-21 97.8
MS.gene003012.t1 AT5G45050 46.667 90 47 1 317 406 1021 1109 6.31e-21 97.8
MS.gene003012.t1 AT5G45050 46.667 90 47 1 317 406 1132 1220 6.94e-21 97.8
MS.gene003012.t1 AT3G58710 49.398 83 34 1 336 410 69 151 8.12e-21 92.8
MS.gene003012.t1 AT3G58710 49.398 83 34 1 336 410 70 152 8.27e-21 92.8
MS.gene003012.t1 AT1G29280 58.065 62 26 0 336 397 73 134 3.13e-20 90.9
MS.gene003012.t1 AT1G69810 45.833 72 38 1 338 408 146 217 7.79e-16 79.3
MS.gene003012.t1 AT1G69810 45.833 72 38 1 338 408 204 275 7.80e-16 80.1
MS.gene003012.t1 AT3G01080 41.237 97 46 4 333 424 201 291 8.33e-16 79.3
MS.gene003012.t1 AT3G01080 54.688 64 28 1 334 397 341 403 8.46e-16 80.5
MS.gene003012.t1 AT3G01080 41.237 97 46 4 333 424 201 291 3.10e-15 78.6
MS.gene003012.t1 AT3G01080 54.688 64 28 1 334 397 303 365 1.07e-15 79.7
MS.gene003012.t1 AT3G01080 41.237 97 46 4 333 424 163 253 3.65e-15 78.2
MS.gene003012.t1 AT2G47260 41.667 96 49 3 317 406 148 242 1.10e-15 79.0
MS.gene003012.t1 AT1G62300 50.000 60 30 0 338 397 313 372 1.84e-15 79.7
MS.gene003012.t1 AT4G22070 50.000 60 30 0 338 397 298 357 2.40e-15 79.3
MS.gene003012.t1 AT4G22070 50.000 60 30 0 338 397 298 357 2.40e-15 79.3
MS.gene003012.t1 AT4G22070 50.000 60 30 0 338 397 298 357 2.40e-15 79.3
MS.gene003012.t1 AT4G22070 50.000 60 30 0 338 397 298 357 2.40e-15 79.3
MS.gene003012.t1 AT4G04450 46.269 67 36 0 338 404 199 265 2.45e-15 79.0
MS.gene003012.t1 AT2G03340 50.746 67 32 1 334 400 412 477 2.80e-15 79.0
MS.gene003012.t1 AT2G03340 48.571 70 34 2 333 402 246 313 1.62e-12 70.5
MS.gene003012.t1 AT4G04450 46.269 67 36 0 338 404 293 359 3.97e-15 78.6
MS.gene003012.t1 AT5G15130 39.773 88 51 1 314 399 160 247 7.24e-15 77.8
MS.gene003012.t1 AT5G15130 39.773 88 51 1 314 399 202 289 8.95e-15 77.8
MS.gene003012.t1 AT1G64000 39.286 84 48 2 313 394 88 170 1.24e-14 73.2
MS.gene003012.t1 AT2G38470 50.000 68 33 1 332 399 357 423 1.59e-14 76.6
MS.gene003012.t1 AT2G38470 48.684 76 37 2 322 397 169 242 2.09e-14 76.3
MS.gene003012.t1 AT1G29860 41.463 82 45 2 327 406 124 204 2.41e-14 74.3
MS.gene003012.t1 AT1G13960 51.562 64 30 1 334 397 406 468 2.57e-14 76.3
MS.gene003012.t1 AT1G13960 48.571 70 34 2 333 402 225 292 1.87e-12 70.1
MS.gene003012.t1 AT1G18860 50.000 60 30 0 338 397 240 299 3.03e-14 75.9
MS.gene003012.t1 AT4G26640 53.226 62 28 1 338 399 206 266 3.30e-14 75.1
MS.gene003012.t1 AT4G26640 53.226 62 28 1 338 399 206 266 3.30e-14 75.1
MS.gene003012.t1 AT4G26640 53.226 62 28 1 338 399 206 266 3.30e-14 75.1
MS.gene003012.t1 AT4G26640 53.226 62 28 1 338 399 206 266 3.30e-14 75.1
MS.gene003012.t1 AT4G26640 53.226 62 28 1 338 399 342 402 3.49e-14 75.5
MS.gene003012.t1 AT5G07100 45.946 74 39 1 332 405 229 301 3.75e-14 73.9
MS.gene003012.t1 AT5G07100 43.836 73 40 1 330 402 110 181 1.93e-12 68.9
MS.gene003012.t1 AT4G26640 53.226 62 28 1 338 399 382 442 3.92e-14 75.5
MS.gene003012.t1 AT2G04880 51.667 60 28 1 338 397 308 366 4.00e-14 75.5
MS.gene003012.t1 AT4G26640 53.226 62 28 1 338 399 310 370 4.01e-14 75.5
MS.gene003012.t1 AT2G04880 51.667 60 28 1 338 397 284 342 4.49e-14 75.1
MS.gene003012.t1 AT1G13960 51.562 64 30 1 334 397 253 315 4.84e-14 74.3
MS.gene003012.t1 AT1G13960 48.571 70 34 2 333 402 72 139 5.11e-12 68.2
MS.gene003012.t1 AT1G68150 50.000 60 30 0 338 397 236 295 5.98e-14 73.9
MS.gene003012.t1 AT3G62340 39.773 88 45 3 338 424 119 199 6.00e-14 72.8
MS.gene003012.t1 AT4G18170 32.278 158 92 6 327 474 160 312 6.34e-14 73.6
MS.gene003012.t1 AT5G43290 57.895 57 23 1 338 394 115 170 6.63e-14 72.8
MS.gene003012.t1 AT1G80840 43.548 62 35 0 337 398 146 207 7.60e-14 72.8
MS.gene003012.t1 AT5G07100 45.946 74 39 1 332 405 136 208 8.42e-14 71.2
MS.gene003012.t1 AT5G07100 43.836 73 40 1 330 402 17 88 3.51e-12 66.6
MS.gene003012.t1 AT5G07100 45.946 74 39 1 332 405 136 208 8.42e-14 71.2
MS.gene003012.t1 AT5G07100 43.836 73 40 1 330 402 17 88 3.51e-12 66.6
MS.gene003012.t1 AT5G07100 45.946 74 39 1 332 405 136 208 8.42e-14 71.2
MS.gene003012.t1 AT5G07100 43.836 73 40 1 330 402 17 88 3.51e-12 66.6
MS.gene003012.t1 AT5G07100 45.946 74 39 1 332 405 136 208 8.42e-14 71.2
MS.gene003012.t1 AT5G07100 43.836 73 40 1 330 402 17 88 3.51e-12 66.6
MS.gene003012.t1 AT2G30250 50.000 62 30 1 338 399 329 389 1.09e-13 73.6
MS.gene003012.t1 AT4G30935 47.692 65 33 1 338 402 332 395 1.42e-13 73.6
MS.gene003012.t1 AT5G56270 48.529 68 34 1 332 399 482 548 1.50e-13 73.9
MS.gene003012.t1 AT5G56270 50.769 65 30 2 337 401 273 335 1.12e-12 71.2
MS.gene003012.t1 AT5G41570 46.032 63 33 1 332 394 93 154 1.62e-13 69.3
MS.gene003012.t1 AT4G31800 40.909 66 39 0 337 402 111 176 1.70e-13 70.9
MS.gene003012.t1 AT4G01720 48.333 60 31 0 338 397 240 299 1.74e-13 73.6
MS.gene003012.t1 AT5G26170 50.000 62 30 1 334 395 110 170 2.08e-13 68.9
MS.gene003012.t1 AT5G46350 43.478 69 38 1 337 405 183 250 2.19e-13 72.0
MS.gene003012.t1 AT1G55600 38.750 80 48 1 318 397 288 366 2.61e-13 72.8
MS.gene003012.t1 AT2G21900 49.180 61 30 1 338 398 110 169 2.68e-13 69.3
MS.gene003012.t1 AT2G37260 55.738 61 25 2 338 398 166 224 3.20e-13 72.4
MS.gene003012.t1 AT2G37260 40.476 84 44 3 315 394 324 405 8.42e-13 70.9
MS.gene003012.t1 AT4G26440 47.887 71 35 2 338 408 179 247 3.42e-13 72.8
MS.gene003012.t1 AT4G26440 40.260 77 45 1 332 408 367 442 1.50e-11 67.4
MS.gene003012.t1 AT4G31800 40.909 66 39 0 337 402 176 241 3.70e-13 70.9
MS.gene003012.t1 AT2G44745 47.619 63 32 1 332 394 140 201 3.71e-13 69.3
MS.gene003012.t1 AT5G45260 46.970 66 33 1 338 401 1209 1274 4.62e-13 72.8
MS.gene003012.t1 AT2G37260 55.738 61 25 2 338 398 86 144 5.02e-13 70.9
MS.gene003012.t1 AT2G37260 40.476 84 44 3 315 394 244 325 1.58e-12 69.7
MS.gene003012.t1 AT2G37260 55.738 61 25 2 338 398 84 142 5.12e-13 70.9
MS.gene003012.t1 AT2G37260 40.476 84 44 3 315 394 242 323 1.53e-12 69.7
MS.gene003012.t1 AT5G49520 46.667 60 31 1 338 397 222 280 1.28e-12 70.1
MS.gene003012.t1 AT2G25000 36.559 93 56 1 337 429 125 214 1.74e-12 68.2
MS.gene003012.t1 AT2G25000 36.559 93 56 1 337 429 103 192 1.86e-12 67.4
MS.gene003012.t1 AT2G25000 36.559 93 56 1 337 429 103 192 1.86e-12 67.4
MS.gene003012.t1 AT1G69310 41.250 80 45 2 315 394 126 203 4.32e-12 67.4
MS.gene003012.t1 AT1G69310 41.250 80 45 2 315 394 126 203 4.32e-12 67.4
MS.gene003012.t1 AT1G69310 41.250 80 45 2 315 394 126 203 4.32e-12 67.4
MS.gene003012.t1 AT2G25000 36.559 93 56 1 337 429 146 235 5.22e-12 67.0
MS.gene003012.t1 AT2G40740 39.785 93 48 3 316 400 149 241 6.00e-12 67.0
MS.gene003012.t1 AT2G40740 39.785 93 48 3 316 400 158 250 7.74e-12 67.0
MS.gene003012.t1 AT5G13080 40.000 65 38 1 338 402 68 131 9.35e-12 63.5
MS.gene003012.t1 AT3G01970 46.154 65 32 2 338 400 66 129 1.53e-11 62.8
MS.gene003012.t1 AT2G46130 38.750 80 48 1 315 394 8 86 2.27e-11 61.2
MS.gene003012.t1 AT4G39410 46.552 58 30 1 338 395 224 280 3.28e-11 65.1
MS.gene003012.t1 AT4G12020 40.000 100 56 3 333 430 464 561 6.22e-11 66.2
MS.gene003012.t1 AT4G12020 40.000 100 56 3 333 430 464 561 6.26e-11 66.2
MS.gene003012.t1 AT4G12020 40.000 100 56 3 333 430 464 561 6.26e-11 66.2
MS.gene003012.t1 AT4G12020 40.000 100 56 3 333 430 397 494 6.34e-11 66.2
MS.gene003012.t1 AT4G12020 40.000 100 56 3 333 430 464 561 6.84e-11 65.9
MS.gene003012.t1 AT4G12020 40.000 100 56 3 333 430 464 561 6.84e-11 65.9
MS.gene003012.t1 AT4G12020 40.000 100 56 3 333 430 464 561 7.90e-11 65.9
MS.gene003012.t1 AT4G12020 40.000 100 56 3 333 430 464 561 7.96e-11 65.9
MS.gene003012.t1 AT4G12020 40.000 100 56 3 333 430 464 561 8.04e-11 65.9
MS.gene003012.t1 AT4G12020 40.000 100 56 3 333 430 464 561 8.19e-11 65.9
MS.gene003012.t1 AT4G12020 45.714 70 36 2 333 402 464 531 9.20e-11 65.5

Find 156 sgRNAs with CRISPR-Local

Find 193 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTAAATGCTAGAAATT+TGG 0.075722 2.2:-61719050 MS.gene003012:CDS
ACCCAAATTTCTAGCATTTA+AGG 0.127042 2.2:+61719048 None:intergenic
CATGAACACTAGTGTTTATC+AGG 0.198077 2.2:+61720370 None:intergenic
CTCCATGCCCACGGGTCTTT+TGG 0.209857 2.2:+61719757 None:intergenic
ATGAATCCAGTTTCAGAATA+AGG 0.224140 2.2:+61718947 None:intergenic
CTCTCTAATAGTTCTATTTC+CGG 0.245383 2.2:+61719103 None:intergenic
CCGTGGGCATGGAGGAAATA+TGG 0.249497 2.2:-61719748 MS.gene003012:CDS
CGGATGTGGAGACCCTTTAA+TGG 0.271178 2.2:+61719717 None:intergenic
TCCTTAAATGCTAGAAATTT+GGG 0.273355 2.2:-61719049 MS.gene003012:CDS
GGTGGGGATGGTGGTGGTCA+AGG 0.277140 2.2:+61720542 None:intergenic
GATAGTGTAGGTGGTGGTGG+CGG 0.292237 2.2:+61720572 None:intergenic
GATTACAGTGGCAGTGATAA+TGG 0.292582 2.2:+61720437 None:intergenic
ACCCGTAACATTGCTACTTT+GGG 0.294068 2.2:+61718991 None:intergenic
GGGGATGGTGGTGGTCAAGG+GGG 0.302266 2.2:+61720545 None:intergenic
GTGGGGATGGTGGTGGTCAA+GGG 0.302668 2.2:+61720543 None:intergenic
TATTCTGAAACTGGATTCAT+TGG 0.302973 2.2:-61718944 MS.gene003012:CDS
TAGAGGGAATGTGATGTTAT+TGG 0.309533 2.2:+61720776 None:intergenic
CACCCGTAACATTGCTACTT+TGG 0.310787 2.2:+61718990 None:intergenic
ATAGTGTAGGTGGTGGTGGC+GGG 0.318835 2.2:+61720573 None:intergenic
ATAGTTCTATTTCCGGATAA+AGG 0.320801 2.2:+61719110 None:intergenic
AACCTCCCTTATTCTGAAAC+TGG 0.323380 2.2:-61718953 MS.gene003012:CDS
TGGGGATGGTGGTGGTCAAG+GGG 0.326902 2.2:+61720544 None:intergenic
ATGAAGTCATTTGGTTTAAG+TGG 0.330576 2.2:+61720687 None:intergenic
AAATTCAGGTTCACCTAGTA+TGG 0.332642 2.2:-61719197 MS.gene003012:CDS
TGGGATAGTGTAGGTGGTGG+TGG 0.332732 2.2:+61720569 None:intergenic
TGCAACGCTACCACATTTAC+TGG 0.340291 2.2:-61720849 MS.gene003012:CDS
AGTGTAGGTGGTGGTGGCGG+GGG 0.341815 2.2:+61720575 None:intergenic
GGGTATTGGAAAATTATAAT+TGG 0.342276 2.2:+61720329 None:intergenic
GGGATGGTGGTGGTCAAGGG+GGG 0.345552 2.2:+61720546 None:intergenic
TAGTGTAGGTGGTGGTGGCG+GGG 0.346368 2.2:+61720574 None:intergenic
TCTACAAACATCACAAATTC+AGG 0.352607 2.2:-61719211 MS.gene003012:CDS
CAAAGTGGTGTGACACTTAG+AGG 0.354737 2.2:+61720759 None:intergenic
CACTATGCGGATCAAGAAAA+AGG 0.357686 2.2:-61719960 MS.gene003012:intron
TGCTCTTAGCAGATATGATT+GGG 0.361525 2.2:+61720169 None:intergenic
TTACACTCTGCGGAAGAAAC+TGG 0.365125 2.2:-61719238 MS.gene003012:CDS
TCTAGATCTATGAAGTCATT+TGG 0.366608 2.2:+61720678 None:intergenic
GTGCTTGTAGCAGATATGAT+AGG 0.367308 2.2:+61720396 None:intergenic
ATCAATGCATGCAACATGTT+TGG 0.367904 2.2:+61720029 None:intergenic
ATCAATGCATGCAACATGTT+TGG 0.367904 2.2:+61720257 None:intergenic
TGATAGGGGTAGTGGTGGTC+GGG 0.373880 2.2:+61720412 None:intergenic
TCTGACCAAGCTGTTATGTT+TGG 0.377584 2.2:+61718890 None:intergenic
TTGGTCAGAAGATTATTTAA+TGG 0.378102 2.2:-61718876 MS.gene003012:CDS
ATAATTTGTGGGGTATTGAT+TGG 0.378506 2.2:+61720116 None:intergenic
GGTTGGATGCACGATCAAAA+TGG 0.380288 2.2:+61720223 None:intergenic
GTTAGTGATGTGGGTGGGGA+TGG 0.386412 2.2:+61720530 None:intergenic
TCAATGCATGCAACATGTTT+GGG 0.386538 2.2:+61720030 None:intergenic
TCAATGCATGCAACATGTTT+GGG 0.386538 2.2:+61720258 None:intergenic
TGTTGTTGTCCAGCGGGTAT+TGG 0.401974 2.2:+61720315 None:intergenic
ATAATTGGCGGGATATTGAT+TGG 0.402825 2.2:+61720344 None:intergenic
TTGGTAGTGGTTTCGATTTG+AGG 0.403044 2.2:+61720795 None:intergenic
ATTACAGTGGCAGTGATAAT+GGG 0.403708 2.2:+61720438 None:intergenic
TTGATTGATCAGCGAGAACC+TGG 0.406949 2.2:+61719137 None:intergenic
GGATGTGGAGACCCTTTAAT+GGG 0.418234 2.2:+61719718 None:intergenic
GTGCTCTTAGCAGATATGAT+TGG 0.424710 2.2:+61720168 None:intergenic
AGTGATGTGGGTGGGGATGG+TGG 0.428433 2.2:+61720533 None:intergenic
AAGCGCAAGTCACCAGAGAC+TGG 0.429554 2.2:-61719262 MS.gene003012:CDS
AGTGGTGGGAATAGTGATGG+TGG 0.436219 2.2:+61720476 None:intergenic
CATTGGGAAATTATAATTTG+TGG 0.438477 2.2:+61720104 None:intergenic
TCTAATAAGAATGTTGTTGT+TGG 0.438733 2.2:-61719292 MS.gene003012:CDS
CCCCAAAGTAGCAATGTTAC+GGG 0.440507 2.2:-61718992 MS.gene003012:CDS
ATTGGGAAATTATAATTTGT+GGG 0.441527 2.2:+61720105 None:intergenic
TATAGCACACCAATGCCATT+TGG 0.445367 2.2:+61719797 None:intergenic
TGAATCCAGTTTCAGAATAA+GGG 0.447038 2.2:+61718948 None:intergenic
AGTGGGAGCTGAGGTGGGGA+TGG 0.450737 2.2:+61720632 None:intergenic
ATACTAGTGGGAGCTGAGGT+GGG 0.454923 2.2:+61720627 None:intergenic
AGCAGATATGATTGGGGTAG+TGG 0.455016 2.2:+61720176 None:intergenic
GAATGTGATGTTATTGGTAG+TGG 0.458828 2.2:+61720782 None:intergenic
GCCCCAAAGTAGCAATGTTA+CGG 0.458952 2.2:-61718993 MS.gene003012:CDS
ATGATAGGGGTAGTGGTGGT+CGG 0.463932 2.2:+61720411 None:intergenic
GATGTGGGTGGGGATGGTGG+TGG 0.464748 2.2:+61720536 None:intergenic
TAATGTTAGTGATGTGGGTG+GGG 0.465398 2.2:+61720526 None:intergenic
ATCTGCAACATCACCATACT+AGG 0.469099 2.2:+61719184 None:intergenic
ACCTGGGCATTGCTGCTCTC+CGG 0.469412 2.2:+61719154 None:intergenic
ATTGGAAAATTATAATTGGC+GGG 0.476395 2.2:+61720333 None:intergenic
CCATATTTCCTCCATGCCCA+CGG 0.476436 2.2:+61719748 None:intergenic
ATGGACTTCAAGTGCCTCAA+TGG 0.476923 2.2:-61718857 MS.gene003012:CDS
AGTCTCTGGTGACTTGCGCT+TGG 0.478420 2.2:+61719264 None:intergenic
CGTGGGCATGGAGGAAATAT+GGG 0.481905 2.2:-61719747 MS.gene003012:CDS
ACAACATTCTTATTAGATGT+TGG 0.483572 2.2:+61719298 None:intergenic
TGAAGTCATTTGGTTTAAGT+GGG 0.485609 2.2:+61720688 None:intergenic
GTTTCGATTTGAGGTGGCGG+TGG 0.486220 2.2:+61720804 None:intergenic
TGGCATTGGTGTGCTATATG+AGG 0.487449 2.2:-61719792 MS.gene003012:CDS
GGGTGGGATAGTGTAGGTGG+TGG 0.487925 2.2:+61720566 None:intergenic
TTACCCTCTGTGGAAGAAGT+TGG 0.488537 2.2:-61719076 MS.gene003012:CDS
CATACTAGTGGGAGCTGAGG+TGG 0.495210 2.2:+61720626 None:intergenic
TGCTTGTAGCAGATATGATA+GGG 0.497057 2.2:+61720397 None:intergenic
ACTTATATTGTGACATATGA+AGG 0.505269 2.2:-61719340 MS.gene003012:CDS
GCAGAGTGTAACCCAGTCTC+TGG 0.505405 2.2:+61719250 None:intergenic
GTGGGAGCTGAGGTGGGGAT+GGG 0.514412 2.2:+61720633 None:intergenic
TAGAAAACATAATAACCAAA+TGG 0.516057 2.2:-61719812 MS.gene003012:CDS
TATTGGAAAATTATAATTGG+CGG 0.522883 2.2:+61720332 None:intergenic
GATGTTGCAGATCGATCATC+CGG 0.525110 2.2:-61719173 MS.gene003012:CDS
ATATTTGTAAACCTCGGATG+TGG 0.527362 2.2:+61719703 None:intergenic
AGCAGATATGATAGGGGTAG+TGG 0.527593 2.2:+61720404 None:intergenic
TTCCAAAAGACCCGTGGGCA+TGG 0.527766 2.2:-61719759 MS.gene003012:CDS
CGCATAGTGCAACCGATGGA+TGG 0.529058 2.2:+61719974 None:intergenic
ACATAATAACCAAATGGCAT+TGG 0.531292 2.2:-61719806 MS.gene003012:CDS
TCCGGAGAGCAGCAATGCCC+AGG 0.531466 2.2:-61719155 MS.gene003012:CDS
TTGAATTTGTTGTTGTCCAG+CGG 0.540268 2.2:+61720308 None:intergenic
TATAATTTCCCAATGCACGC+TGG 0.543748 2.2:-61720096 MS.gene003012:CDS
GATAGGGGTAGTGGTGGTCG+GGG 0.550830 2.2:+61720413 None:intergenic
GTTGGATGCACGATCAAAAT+GGG 0.551415 2.2:+61720224 None:intergenic
TGGCATACTAGTGGGAGCTG+AGG 0.554747 2.2:+61720623 None:intergenic
GGCGATAACTGATGGATGGT+TGG 0.556513 2.2:+61720206 None:intergenic
CATATTTCCTCCATGCCCAC+GGG 0.559003 2.2:+61719749 None:intergenic
TTGATTGGTTTCATGAACAC+TGG 0.562289 2.2:+61720131 None:intergenic
AGTGTTAATGTTAGTGATGT+GGG 0.567585 2.2:+61720521 None:intergenic
TACTAGTGGGAGCTGAGGTG+GGG 0.568500 2.2:+61720628 None:intergenic
TGATACCAAACATAACAGCT+TGG 0.570214 2.2:-61718895 MS.gene003012:CDS
GTGGTGGGAATAGTGATGGT+GGG 0.572780 2.2:+61720477 None:intergenic
GATTGGGGTAGTGGTGGTCG+AGG 0.574650 2.2:+61720185 None:intergenic
AGATTGTCCAGCAAGAAGAA+AGG 0.576880 2.2:-61719389 MS.gene003012:CDS
GGGAGTGGTGGGAATAGTGA+TGG 0.578338 2.2:+61720473 None:intergenic
AGCGCAAGTCACCAGAGACT+GGG 0.579128 2.2:-61719261 MS.gene003012:CDS
TGAATTTGTTGTTGTCCAGC+GGG 0.581001 2.2:+61720309 None:intergenic
TTGGGAAATTATAATTTGTG+GGG 0.581271 2.2:+61720106 None:intergenic
GGAATATAGCGCCACCATTG+AGG 0.585327 2.2:+61718843 None:intergenic
GTGGTTTCGATTTGAGGTGG+CGG 0.594576 2.2:+61720801 None:intergenic
ATGAACACTGGTGTTTGTCA+TGG 0.597215 2.2:+61720143 None:intergenic
GTAGTGGTTTCGATTTGAGG+TGG 0.597682 2.2:+61720798 None:intergenic
AAAGTGGTGTGACACTTAGA+GGG 0.602585 2.2:+61720760 None:intergenic
GTGGTCGAGGCGATAACTGA+TGG 0.602965 2.2:+61720198 None:intergenic
ATGAACACTAGTGTTTATCA+GGG 0.614534 2.2:+61720371 None:intergenic
ATCCAGTTTCAGAATAAGGG+AGG 0.616537 2.2:+61718951 None:intergenic
GACTTCAAGTGCCTCAATGG+TGG 0.617561 2.2:-61718854 MS.gene003012:CDS
TTAATGTTAGTGATGTGGGT+GGG 0.619756 2.2:+61720525 None:intergenic
GAAGTCATTTGGTTTAAGTG+GGG 0.620194 2.2:+61720689 None:intergenic
GCTATTACAAATGTAGCACT+TGG 0.623098 2.2:-61719414 MS.gene003012:CDS
TAGTGTTAATGTTAGTGATG+TGG 0.624324 2.2:+61720520 None:intergenic
TTACAGTGGCAGTGATAATG+GGG 0.626243 2.2:+61720439 None:intergenic
GTTGGTAGGACCAGTAAATG+TGG 0.630317 2.2:+61720839 None:intergenic
CCCGTAACATTGCTACTTTG+GGG 0.630454 2.2:+61718992 None:intergenic
TTAAAGGGTCTCCACATCCG+AGG 0.642226 2.2:-61719714 MS.gene003012:intron
AGATATGATTGGGGTAGTGG+TGG 0.642708 2.2:+61720179 None:intergenic
TGATTGATCAGCGAGAACCT+GGG 0.643075 2.2:+61719138 None:intergenic
ATGAGCTTCCAAAAGACCCG+TGG 0.645013 2.2:-61719765 MS.gene003012:CDS
CAAAAGACCCGTGGGCATGG+AGG 0.646342 2.2:-61719756 MS.gene003012:CDS
GATCCGCATAGTGCAACCGA+TGG 0.649098 2.2:+61719970 None:intergenic
GATCCAACTTCTTCCACAGA+GGG 0.650056 2.2:+61719073 None:intergenic
GTAAAATCATCATAGCAAAG+TGG 0.655809 2.2:+61720744 None:intergenic
CATCCATCGGTTGCACTATG+CGG 0.659476 2.2:-61719973 MS.gene003012:CDS
AGATATGATAGGGGTAGTGG+TGG 0.663183 2.2:+61720407 None:intergenic
TCGAGGCGATAACTGATGGA+TGG 0.664288 2.2:+61720202 None:intergenic
AGAGAGTCACTTACCCTCTG+TGG 0.665669 2.2:-61719086 MS.gene003012:CDS
TGAGCTTCCAAAAGACCCGT+GGG 0.668568 2.2:-61719764 MS.gene003012:CDS
GGCATTGGTGTGCTATATGA+GGG 0.674239 2.2:-61719791 MS.gene003012:CDS
GTATGCACGTTCAAAATGAG+TGG 0.675266 2.2:+61719999 None:intergenic
GCTTGTAGCAGATATGATAG+GGG 0.681969 2.2:+61720398 None:intergenic
GCTCTTAGCAGATATGATTG+GGG 0.685620 2.2:+61720170 None:intergenic
ACGTGCATACAACCATCCAT+CGG 0.691580 2.2:-61719986 MS.gene003012:CDS
GGTGGTCGGGGTGATTACAG+TGG 0.694133 2.2:+61720425 None:intergenic
GTTAATGTTAGTGATGTGGG+TGG 0.694254 2.2:+61720524 None:intergenic
GGATGCACGATCAAAATGGG+TGG 0.719593 2.2:+61720227 None:intergenic
TACAGTGGCAGTGATAATGG+GGG 0.720290 2.2:+61720440 None:intergenic
AGAGACTGGGTTACACTCTG+CGG 0.724150 2.2:-61719248 MS.gene003012:CDS
TGATCCAACTTCTTCCACAG+AGG 0.749435 2.2:+61719072 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAATTATTGTTTATAATG+TGG + chr2.2:61720087-61720106 None:intergenic 15.0%
!! ATTTCTTTCAACATCATTTA+TGG + chr2.2:61720275-61720294 None:intergenic 20.0%
!! TAGAAAACATAATAACCAAA+TGG - chr2.2:61719917-61719936 MS.gene003012:intron 20.0%
!! TATTGGAAAATTATAATTGG+CGG + chr2.2:61719400-61719419 None:intergenic 20.0%
!!! AACATTTGTTATCTTAATCA+TGG - chr2.2:61720198-61720217 MS.gene003012:CDS 20.0%
!!! ATTGGGAAATTATAATTTGT+GGG + chr2.2:61719627-61719646 None:intergenic 20.0%
!!! TGTTTTCTATAAGAAAAGAA+AGG + chr2.2:61719906-61719925 None:intergenic 20.0%
!!! TTTTGAATATTTGTAAACCT+CGG + chr2.2:61720035-61720054 None:intergenic 20.0%
! AAATCAATAAATGATGTTGC+AGG - chr2.2:61720291-61720310 MS.gene003012:CDS 25.0%
! ACAACATTCTTATTAGATGT+TGG + chr2.2:61720434-61720453 None:intergenic 25.0%
! ACTTATATTGTGACATATGA+AGG - chr2.2:61720389-61720408 MS.gene003012:CDS 25.0%
! ATCCTTAAATGCTAGAAATT+TGG - chr2.2:61720679-61720698 MS.gene003012:CDS 25.0%
! ATTGGAAAATTATAATTGGC+GGG + chr2.2:61719399-61719418 None:intergenic 25.0%
! CATTGGGAAATTATAATTTG+TGG + chr2.2:61719628-61719647 None:intergenic 25.0%
! TCAATCAAAAATCCTTTATC+CGG - chr2.2:61720607-61720626 MS.gene003012:CDS 25.0%
! TCCTTAAATGCTAGAAATTT+GGG - chr2.2:61720680-61720699 MS.gene003012:CDS 25.0%
! TCTAATAAGAATGTTGTTGT+TGG - chr2.2:61720437-61720456 MS.gene003012:CDS 25.0%
! TTGGTCAGAAGATTATTTAA+TGG - chr2.2:61720853-61720872 MS.gene003012:CDS 25.0%
!! TACAATTATATGCATTGACA+AGG + chr2.2:61720169-61720188 None:intergenic 25.0%
!! TTGGGAAATTATAATTTGTG+GGG + chr2.2:61719626-61719645 None:intergenic 25.0%
!!! GGGTATTGGAAAATTATAAT+TGG + chr2.2:61719403-61719422 None:intergenic 25.0%
ACATAATAACCAAATGGCAT+TGG - chr2.2:61719923-61719942 MS.gene003012:intron 30.0%
AGTGTTAATGTTAGTGATGT+GGG + chr2.2:61719211-61719230 None:intergenic 30.0%
ATGAACACTAGTGTTTATCA+GGG + chr2.2:61719361-61719380 None:intergenic 30.0%
ATGAATCCAGTTTCAGAATA+AGG + chr2.2:61720785-61720804 None:intergenic 30.0%
GTAAAATCATCATAGCAAAG+TGG + chr2.2:61718988-61719007 None:intergenic 30.0%
TAGTGTTAATGTTAGTGATG+TGG + chr2.2:61719212-61719231 None:intergenic 30.0%
TCTACAAACATCACAAATTC+AGG - chr2.2:61720518-61720537 MS.gene003012:CDS 30.0%
TCTAGATCTATGAAGTCATT+TGG + chr2.2:61719054-61719073 None:intergenic 30.0%
TGAATCCAGTTTCAGAATAA+GGG + chr2.2:61720784-61720803 None:intergenic 30.0%
! AAGAGACTGAACTATTTTCT+TGG + chr2.2:61719017-61719036 None:intergenic 30.0%
! ATAGTTCTATTTCCGGATAA+AGG + chr2.2:61720622-61720641 None:intergenic 30.0%
! ATGAAGTCATTTGGTTTAAG+TGG + chr2.2:61719045-61719064 None:intergenic 30.0%
! CTCTCTAATAGTTCTATTTC+CGG + chr2.2:61720629-61720648 None:intergenic 30.0%
! GGATTTTCAAAAATGTTGGT+AGG + chr2.2:61718907-61718926 None:intergenic 30.0%
! TGAAGTCATTTGGTTTAAGT+GGG + chr2.2:61719044-61719063 None:intergenic 30.0%
!! ACCCAAATTTCTAGCATTTA+AGG + chr2.2:61720684-61720703 None:intergenic 30.0%
!! ATAATTTGTGGGGTATTGAT+TGG + chr2.2:61719616-61719635 None:intergenic 30.0%
!! TATTCTGAAACTGGATTCAT+TGG - chr2.2:61720785-61720804 MS.gene003012:CDS 30.0%
!!! ATTGATTTTTGGCATACTAG+TGG + chr2.2:61719118-61719137 None:intergenic 30.0%
!!! TTGATTTTTGGCATACTAGT+GGG + chr2.2:61719117-61719136 None:intergenic 30.0%
ATAATTGGCGGGATATTGAT+TGG + chr2.2:61719388-61719407 None:intergenic 35.0%
ATATTTGTAAACCTCGGATG+TGG + chr2.2:61720029-61720048 None:intergenic 35.0%
ATCAATGCATGCAACATGTT+TGG + chr2.2:61719475-61719494 None:intergenic 35.0%
ATGGGCAAAAACCCATTAAA+GGG - chr2.2:61720000-61720019 MS.gene003012:CDS 35.0%
ATTACAGTGGCAGTGATAAT+GGG + chr2.2:61719294-61719313 None:intergenic 35.0%
CATGAACACTAGTGTTTATC+AGG + chr2.2:61719362-61719381 None:intergenic 35.0%
GAATGTGATGTTATTGGTAG+TGG + chr2.2:61718950-61718969 None:intergenic 35.0%
GCTATTACAAATGTAGCACT+TGG - chr2.2:61720315-61720334 MS.gene003012:CDS 35.0%
TAGAGGGAATGTGATGTTAT+TGG + chr2.2:61718956-61718975 None:intergenic 35.0%
TATGGGCAAAAACCCATTAA+AGG - chr2.2:61719999-61720018 MS.gene003012:CDS 35.0%
TCAATGCATGCAACATGTTT+GGG + chr2.2:61719474-61719493 None:intergenic 35.0%
TGATACCAAACATAACAGCT+TGG - chr2.2:61720834-61720853 MS.gene003012:CDS 35.0%
TGCTCTTAGCAGATATGATT+GGG + chr2.2:61719563-61719582 None:intergenic 35.0%
TGCTTGTAGCAGATATGATA+GGG + chr2.2:61719335-61719354 None:intergenic 35.0%
TTAATGTTAGTGATGTGGGT+GGG + chr2.2:61719207-61719226 None:intergenic 35.0%
! AAATTCAGGTTCACCTAGTA+TGG - chr2.2:61720532-61720551 MS.gene003012:CDS 35.0%
! CATCACTGTTTAAAACACGA+GGG + chr2.2:61720132-61720151 None:intergenic 35.0%
! GAAGTCATTTGGTTTAAGTG+GGG + chr2.2:61719043-61719062 None:intergenic 35.0%
! TATAATTTTCCAATACCCGC+TGG - chr2.2:61719405-61719424 MS.gene003012:CDS 35.0%
! TTTTCAACCTTTCTTCTTGC+TGG + chr2.2:61720350-61720369 None:intergenic 35.0%
!! CGGTGGATTTTCAAAAATGT+TGG + chr2.2:61718911-61718930 None:intergenic 35.0%
!! TTGAATTTGTTGTTGTCCAG+CGG + chr2.2:61719424-61719443 None:intergenic 35.0%
!! TTGATTGGTTTCATGAACAC+TGG + chr2.2:61719373-61719392 None:intergenic 35.0%
AAAGTGGTGTGACACTTAGA+GGG + chr2.2:61718972-61718991 None:intergenic 40.0%
AGATTGTCCAGCAAGAAGAA+AGG - chr2.2:61720340-61720359 MS.gene003012:CDS 40.0%
ATCCAGTTTCAGAATAAGGG+AGG + chr2.2:61720781-61720800 None:intergenic 40.0%
ATCTGCAACATCACCATACT+AGG + chr2.2:61720548-61720567 None:intergenic 40.0%
ATGAACACTGGTGTTTGTCA+TGG + chr2.2:61719589-61719608 None:intergenic 40.0%
CACTATGCGGATCAAGAAAA+AGG - chr2.2:61719769-61719788 MS.gene003012:CDS 40.0%
GATTACAGTGGCAGTGATAA+TGG + chr2.2:61719295-61719314 None:intergenic 40.0%
GCTCTTAGCAGATATGATTG+GGG + chr2.2:61719562-61719581 None:intergenic 40.0%
GCTTGTAGCAGATATGATAG+GGG + chr2.2:61719334-61719353 None:intergenic 40.0%
GTATGCACGTTCAAAATGAG+TGG + chr2.2:61719733-61719752 None:intergenic 40.0%
GTGCTCTTAGCAGATATGAT+TGG + chr2.2:61719564-61719583 None:intergenic 40.0%
GTGCTTGTAGCAGATATGAT+AGG + chr2.2:61719336-61719355 None:intergenic 40.0%
GTTAATGTTAGTGATGTGGG+TGG + chr2.2:61719208-61719227 None:intergenic 40.0%
GTTGGATGCACGATCAAAAT+GGG + chr2.2:61719508-61719527 None:intergenic 40.0%
TAATGTTAGTGATGTGGGTG+GGG + chr2.2:61719206-61719225 None:intergenic 40.0%
TATAATTTCCCAATGCACGC+TGG - chr2.2:61719633-61719652 MS.gene003012:intron 40.0%
TATAGCACACCAATGCCATT+TGG + chr2.2:61719935-61719954 None:intergenic 40.0%
TCTGACCAAGCTGTTATGTT+TGG + chr2.2:61720842-61720861 None:intergenic 40.0%
! CCATCACTGTTTAAAACACG+AGG + chr2.2:61720133-61720152 None:intergenic 40.0%
! TTACAGTGGCAGTGATAATG+GGG + chr2.2:61719293-61719312 None:intergenic 40.0%
!! AACCTCCCTTATTCTGAAAC+TGG - chr2.2:61720776-61720795 MS.gene003012:CDS 40.0%
!! ACCCGTAACATTGCTACTTT+GGG + chr2.2:61720741-61720760 None:intergenic 40.0%
!! CCTCGTGTTTTAAACAGTGA+TGG - chr2.2:61720130-61720149 MS.gene003012:CDS 40.0%
!! TGAATTTGTTGTTGTCCAGC+GGG + chr2.2:61719423-61719442 None:intergenic 40.0%
!! TGATAATGGGGGTAATGGTA+GGG + chr2.2:61719281-61719300 None:intergenic 40.0%
!! TTGGTAGTGGTTTCGATTTG+AGG + chr2.2:61718937-61718956 None:intergenic 40.0%
!!! GTGGTGGTGGTATTGATTTT+TGG + chr2.2:61719129-61719148 None:intergenic 40.0%
ACGTGCATACAACCATCCAT+CGG - chr2.2:61719743-61719762 MS.gene003012:CDS 45.0%
AGCAGATATGATAGGGGTAG+TGG + chr2.2:61719328-61719347 None:intergenic 45.0%
AGCAGATATGATTGGGGTAG+TGG + chr2.2:61719556-61719575 None:intergenic 45.0%
ATGGACTTCAAGTGCCTCAA+TGG - chr2.2:61720872-61720891 MS.gene003012:CDS 45.0%
CAAAGTGGTGTGACACTTAG+AGG + chr2.2:61718973-61718992 None:intergenic 45.0%
CCCCAAAGTAGCAATGTTAC+GGG - chr2.2:61720737-61720756 MS.gene003012:CDS 45.0%
GATCCAACTTCTTCCACAGA+GGG + chr2.2:61720659-61720678 None:intergenic 45.0%
GATGTTGCAGATCGATCATC+CGG - chr2.2:61720556-61720575 MS.gene003012:CDS 45.0%
GCCCCAAAGTAGCAATGTTA+CGG - chr2.2:61720736-61720755 MS.gene003012:CDS 45.0%
GGATGTGGAGACCCTTTAAT+GGG + chr2.2:61720014-61720033 None:intergenic 45.0%
GGTTGGATGCACGATCAAAA+TGG + chr2.2:61719509-61719528 None:intergenic 45.0%
TGATCCAACTTCTTCCACAG+AGG + chr2.2:61720660-61720679 None:intergenic 45.0%
TGATTGATCAGCGAGAACCT+GGG + chr2.2:61720594-61720613 None:intergenic 45.0%
TGCAACGCTACCACATTTAC+TGG - chr2.2:61718880-61718899 MS.gene003012:CDS 45.0%
TTACACTCTGCGGAAGAAAC+TGG - chr2.2:61720491-61720510 MS.gene003012:CDS 45.0%
TTACCCTCTGTGGAAGAAGT+TGG - chr2.2:61720653-61720672 MS.gene003012:CDS 45.0%
TTGATTGATCAGCGAGAACC+TGG + chr2.2:61720595-61720614 None:intergenic 45.0%
! AGATATGATAGGGGTAGTGG+TGG + chr2.2:61719325-61719344 None:intergenic 45.0%
! AGATATGATTGGGGTAGTGG+TGG + chr2.2:61719553-61719572 None:intergenic 45.0%
! ATAATGGGGGTAATGGTAGG+GGG + chr2.2:61719279-61719298 None:intergenic 45.0%
! CACCCGTAACATTGCTACTT+TGG + chr2.2:61720742-61720761 None:intergenic 45.0%
! GTAGTGGTTTCGATTTGAGG+TGG + chr2.2:61718934-61718953 None:intergenic 45.0%
! GTTGGTAGGACCAGTAAATG+TGG + chr2.2:61718893-61718912 None:intergenic 45.0%
! GTTTTTGTCCAGCGTGCATT+GGG + chr2.2:61719644-61719663 None:intergenic 45.0%
!! AGGGTGCGAGTGTTTGTTTT+AGG + chr2.2:61720113-61720132 None:intergenic 45.0%
!! CCCGTAACATTGCTACTTTG+GGG + chr2.2:61720740-61720759 None:intergenic 45.0%
!! GATAATGGGGGTAATGGTAG+GGG + chr2.2:61719280-61719299 None:intergenic 45.0%
!! GGCATTGGTGTGCTATATGA+GGG - chr2.2:61719938-61719957 MS.gene003012:intron 45.0%
!! GTGATAATGGGGGTAATGGT+AGG + chr2.2:61719282-61719301 None:intergenic 45.0%
!! TACAGTGGCAGTGATAATGG+GGG + chr2.2:61719292-61719311 None:intergenic 45.0%
!! TGGCATTGGTGTGCTATATG+AGG - chr2.2:61719937-61719956 MS.gene003012:intron 45.0%
!! TGTTTTTGTCCAGCGTGCAT+TGG + chr2.2:61719645-61719664 None:intergenic 45.0%
AGAGACTGGGTTACACTCTG+CGG - chr2.2:61720481-61720500 MS.gene003012:CDS 50.0%
AGAGAGTCACTTACCCTCTG+TGG - chr2.2:61720643-61720662 MS.gene003012:CDS 50.0%
ATACTAGTGGGAGCTGAGGT+GGG + chr2.2:61719105-61719124 None:intergenic 50.0%
ATGAGCTTCCAAAAGACCCG+TGG - chr2.2:61719964-61719983 MS.gene003012:CDS 50.0%
CATATTTCCTCCATGCCCAC+GGG + chr2.2:61719983-61720002 None:intergenic 50.0%
CCATATTTCCTCCATGCCCA+CGG + chr2.2:61719984-61720003 None:intergenic 50.0%
CGGATGTGGAGACCCTTTAA+TGG + chr2.2:61720015-61720034 None:intergenic 50.0%
CGTGGGCATGGAGGAAATAT+GGG - chr2.2:61719982-61720001 MS.gene003012:CDS 50.0%
GACTTCAAGTGCCTCAATGG+TGG - chr2.2:61720875-61720894 MS.gene003012:CDS 50.0%
GGAATATAGCGCCACCATTG+AGG + chr2.2:61720889-61720908 None:intergenic 50.0%
GGATGCACGATCAAAATGGG+TGG + chr2.2:61719505-61719524 None:intergenic 50.0%
TCGAGGCGATAACTGATGGA+TGG + chr2.2:61719530-61719549 None:intergenic 50.0%
TGAGCTTCCAAAAGACCCGT+GGG - chr2.2:61719965-61719984 MS.gene003012:CDS 50.0%
TGTTGTTGTCCAGCGGGTAT+TGG + chr2.2:61719417-61719436 None:intergenic 50.0%
TTAAAGGGTCTCCACATCCG+AGG - chr2.2:61720015-61720034 MS.gene003012:CDS 50.0%
! AGTGGTGGGAATAGTGATGG+TGG + chr2.2:61719256-61719275 None:intergenic 50.0%
! ATGATAGGGGTAGTGGTGGT+CGG + chr2.2:61719321-61719340 None:intergenic 50.0%
! CATCCATCGGTTGCACTATG+CGG - chr2.2:61719756-61719775 MS.gene003012:CDS 50.0%
! GGCGATAACTGATGGATGGT+TGG + chr2.2:61719526-61719545 None:intergenic 50.0%
! GTGGTGGGAATAGTGATGGT+GGG + chr2.2:61719255-61719274 None:intergenic 50.0%
! GTGGTTTCGATTTGAGGTGG+CGG + chr2.2:61718931-61718950 None:intergenic 50.0%
!! GGCAGTGATAATGGGGGTAA+TGG + chr2.2:61719286-61719305 None:intergenic 50.0%
AAGCGCAAGTCACCAGAGAC+TGG - chr2.2:61720467-61720486 MS.gene003012:CDS 55.0%
AGCGCAAGTCACCAGAGACT+GGG - chr2.2:61720468-61720487 MS.gene003012:CDS 55.0%
CATACTAGTGGGAGCTGAGG+TGG + chr2.2:61719106-61719125 None:intergenic 55.0%
CCGTGGGCATGGAGGAAATA+TGG - chr2.2:61719981-61720000 MS.gene003012:CDS 55.0%
CGCATAGTGCAACCGATGGA+TGG + chr2.2:61719758-61719777 None:intergenic 55.0%
GATCCGCATAGTGCAACCGA+TGG + chr2.2:61719762-61719781 None:intergenic 55.0%
GCAGAGTGTAACCCAGTCTC+TGG + chr2.2:61720482-61720501 None:intergenic 55.0%
GTAATGGTAGGGGGAGTGGT+GGG + chr2.2:61719270-61719289 None:intergenic 55.0%
GTGGTCGAGGCGATAACTGA+TGG + chr2.2:61719534-61719553 None:intergenic 55.0%
GTTAGTGATGTGGGTGGGGA+TGG + chr2.2:61719202-61719221 None:intergenic 55.0%
TACTAGTGGGAGCTGAGGTG+GGG + chr2.2:61719104-61719123 None:intergenic 55.0%
TGGCATACTAGTGGGAGCTG+AGG + chr2.2:61719109-61719128 None:intergenic 55.0%
TTCCAAAAGACCCGTGGGCA+TGG - chr2.2:61719970-61719989 MS.gene003012:CDS 55.0%
! AGTCTCTGGTGACTTGCGCT+TGG + chr2.2:61720468-61720487 None:intergenic 55.0%
! GGGAGTGGTGGGAATAGTGA+TGG + chr2.2:61719259-61719278 None:intergenic 55.0%
! GTTTCGATTTGAGGTGGCGG+TGG + chr2.2:61718928-61718947 None:intergenic 55.0%
! TGATAGGGGTAGTGGTGGTC+GGG + chr2.2:61719320-61719339 None:intergenic 55.0%
! TGGGATAGTGTAGGTGGTGG+TGG + chr2.2:61719163-61719182 None:intergenic 55.0%
!! ATAGTGTAGGTGGTGGTGGC+GGG + chr2.2:61719159-61719178 None:intergenic 55.0%
!! GATAGTGTAGGTGGTGGTGG+CGG + chr2.2:61719160-61719179 None:intergenic 55.0%
AGTGATGTGGGTGGGGATGG+TGG + chr2.2:61719199-61719218 None:intergenic 60.0%
CAAAAGACCCGTGGGCATGG+AGG - chr2.2:61719973-61719992 MS.gene003012:CDS 60.0%
CAAGGGGGGTGGGATAGTGT+AGG + chr2.2:61719172-61719191 None:intergenic 60.0%
GGGTGGGATAGTGTAGGTGG+TGG + chr2.2:61719166-61719185 None:intergenic 60.0%
GGTGGTCGGGGTGATTACAG+TGG + chr2.2:61719307-61719326 None:intergenic 60.0%
! ACCTGGGCATTGCTGCTCTC+CGG + chr2.2:61720578-61720597 None:intergenic 60.0%
! CTCCATGCCCACGGGTCTTT+TGG + chr2.2:61719975-61719994 None:intergenic 60.0%
! GATAGGGGTAGTGGTGGTCG+GGG + chr2.2:61719319-61719338 None:intergenic 60.0%
! GATTGGGGTAGTGGTGGTCG+AGG + chr2.2:61719547-61719566 None:intergenic 60.0%
! GGTAATGGTAGGGGGAGTGG+TGG + chr2.2:61719271-61719290 None:intergenic 60.0%
!! GTGGGGATGGTGGTGGTCAA+GGG + chr2.2:61719189-61719208 None:intergenic 60.0%
!! TAGTGTAGGTGGTGGTGGCG+GGG + chr2.2:61719158-61719177 None:intergenic 60.0%
!! TGGGGATGGTGGTGGTCAAG+GGG + chr2.2:61719188-61719207 None:intergenic 60.0%
AGTGGGAGCTGAGGTGGGGA+TGG + chr2.2:61719100-61719119 None:intergenic 65.0%
GGGGGGTGGGATAGTGTAGG+TGG + chr2.2:61719169-61719188 None:intergenic 65.0%
GTGGGAGCTGAGGTGGGGAT+GGG + chr2.2:61719099-61719118 None:intergenic 65.0%
TCCGGAGAGCAGCAATGCCC+AGG - chr2.2:61720574-61720593 MS.gene003012:CDS 65.0%
! GATGTGGGTGGGGATGGTGG+TGG + chr2.2:61719196-61719215 None:intergenic 65.0%
! GGGGGTAATGGTAGGGGGAG+TGG + chr2.2:61719274-61719293 None:intergenic 65.0%
!! AGTGTAGGTGGTGGTGGCGG+GGG + chr2.2:61719157-61719176 None:intergenic 65.0%
!! ATGGTGGTGGTCAAGGGGGG+TGG + chr2.2:61719183-61719202 None:intergenic 65.0%
!! GGGATGGTGGTGGTCAAGGG+GGG + chr2.2:61719186-61719205 None:intergenic 65.0%
!! GGGGATGGTGGTGGTCAAGG+GGG + chr2.2:61719187-61719206 None:intergenic 65.0%
!! GGTGGGGATGGTGGTGGTCA+AGG + chr2.2:61719190-61719209 None:intergenic 65.0%
!! TGGTGGTGGTCAAGGGGGGT+GGG + chr2.2:61719182-61719201 None:intergenic 65.0%
GGCGGGGGAAGATGTGGTGG+TGG + chr2.2:61719142-61719161 None:intergenic 70.0%
!! GGTGGCGGGGGAAGATGTGG+TGG + chr2.2:61719145-61719164 None:intergenic 70.0%
!! GGTGGTGGCGGGGGAAGATG+TGG + chr2.2:61719148-61719167 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 61718838 61720913 61718838 ID=MS.gene003012
chr2.2 mRNA 61718838 61720913 61718838 ID=MS.gene003012.t1;Parent=MS.gene003012
chr2.2 exon 61719961 61720913 61719961 ID=MS.gene003012.t1.exon1;Parent=MS.gene003012.t1
chr2.2 CDS 61719961 61720913 61719961 ID=cds.MS.gene003012.t1;Parent=MS.gene003012.t1
chr2.2 exon 61719715 61719831 61719715 ID=MS.gene003012.t1.exon2;Parent=MS.gene003012.t1
chr2.2 CDS 61719715 61719831 61719715 ID=cds.MS.gene003012.t1;Parent=MS.gene003012.t1
chr2.2 exon 61718838 61719438 61718838 ID=MS.gene003012.t1.exon3;Parent=MS.gene003012.t1
chr2.2 CDS 61718838 61719438 61718838 ID=cds.MS.gene003012.t1;Parent=MS.gene003012.t1
Gene Sequence

>MS.gene003012

ATGGATAATGATGATCGAGATCTCTTTTCTATTGTTCGTAGTTGCAACGCTACCACATTTACTGGTCCTACCAACATTTTTGAAAATCCACCGCCACCTCAAATCGAAACCACTACCAATAACATCACATTCCCTCTAAGTGTCACACCACTTTGCTATGATGATTTTACTTTTAACCAAGAAAATAGTTCAGTCTCTTTTGCCCCACTTAAACCAAATGACTTCATAGATCTAGATAAATTGATGATCAATTTCAATCCCATCCCCACCTCAGCTCCCACTAGTATGCCAAAAATCAATACCACCACCACATCTTCCCCCGCCACCACCACCTACACTATCCCACCCCCCTTGACCACCACCATCCCCACCCACATCACTAACATTAACACTAGTGTTCATATTATCAACACTCCCACCATCACTATTCCCACCACTCCCCCTACCATTACCCCCATTATCACTGCCACTGTAATCACCCCGACCACCACTACCCCTATCATATCTGCTACAAGCACTACCCTGATAAACACTAGTGTTCATGAAACCAATCAATATCCCGCCAATTATAATTTTCCAATACCCGCTGGACAACAACAAATTCAACAAAACATCAACAATCAAGTGTCTGTTCCCAAACATGTTGCATGCATTGATATCACAGCCACCCATTTTGATCGTGCATCCAACCATCCATCAGTTATCGCCTCGACCACCACTACCCCAATCATATCTGCTAAGAGCACTACCATGACAAACACCAGTGTTCATGAAACCAATCAATACCCCACAAATTATAATTTCCCAATGCACGCTGGACAAAAACAGATTCAACAAAACATCAACAATCAAGTGTCTGTTCCCAAACATGTTGCATGCATTGATATCACAACCACTCATTTTGAACGTGCATACAACCATCCATCGGTTGCACTATGCGGATCAAGAAAAAGGTAATGTATTTATTCTATTATTTCATATATTTTAATTATAAATCAATTTTATTATGTCAAAATAATTGAAATATTTGACGTAACTTAGTTCAAGTGAACTAAAATTATTTTACCTTTCTTTTCTTATAGAAAACATAATAACCAAATGGCATTGGTGTGCTATATGAGGGACGATGAGCTTCCAAAAGACCCGTGGGCATGGAGGAAATATGGGCAAAAACCCATTAAAGGGTCTCCACATCCGAGGTTTACAAATATTCAAAACTTTATCTTTAACATATTTCTCTTTTCTTCCACATTATAAACAATAATTTTGTTACCTAAAACAAACACTCGCACCCTCGTGTTTTAAACAGTGATGGTAAGCATTTAGATCCTTGTCAATGCATATAATTGTAATTAAATTCAACATTTGTTATCTTAATCATGGTTTTGTTTGTGTTTCAATTTTGAAAACATCAAAAACTAGTGTATATTTAGTCCATAAATGATGTTGAAAGAAATCAATAAATGATGTTGCAGGAGCTATTACAAATGTAGCACTTGGTCAGATTGTCCAGCAAGAAGAAAGGTTGAAAAATGCAAAACTCAAGAGAACACTTATATTGTGACATATGAAGGAGAGCACAATCATGCAAAGCCAACATCTAATAAGAATGTTGTTGTTGGTACATCCAAGCGCAAGTCACCAGAGACTGGGTTACACTCTGCGGAAGAAACTGGATCATCTACAAACATCACAAATTCAGGTTCACCTAGTATGGTGATGTTGCAGATCGATCATCCGGAGAGCAGCAATGCCCAGGTTCTCGCTGATCAATCAAAAATCCTTTATCCGGAAATAGAACTATTAGAGAGTCACTTACCCTCTGTGGAAGAAGTTGGATCATCCTTAAATGCTAGAAATTTGGGTTCACATAACAAAATGATTATGCAATTTGATGAGCCCCAAAGTAGCAATGTTACGGGTGTTGTCGATGACTCAAACCTCCCTTATTCTGAAACTGGATTCATTGGAAGCTTTGATGATAATGATGACATTTTGATACCAAACATAACAGCTTGGTCAGAAGATTATTTAATGGACTTCAAGTGCCTCAATGGTGGCGCTATATTCCCTTAG
Protein sequence

>MS.gene003012.t1

MDNDDRDLFSIVRSCNATTFTGPTNIFENPPPPQIETTTNNITFPLSVTPLCYDDFTFNQENSSVSFAPLKPNDFIDLDKLMINFNPIPTSAPTSMPKINTTTTSSPATTTYTIPPPLTTTIPTHITNINTSVHIINTPTITIPTTPPTITPIITATVITPTTTTPIISATSTTLINTSVHETNQYPANYNFPIPAGQQQIQQNINNQVSVPKHVACIDITATHFDRASNHPSVIASTTTTPIISAKSTTMTNTSVHETNQYPTNYNFPMHAGQKQIQQNINNQVSVPKHVACIDITTTHFERAYNHPSVALCGSRKRKHNNQMALVCYMRDDELPKDPWAWRKYGQKPIKGSPHPRSYYKCSTWSDCPARRKVEKCKTQENTYIVTYEGEHNHAKPTSNKNVVVGTSKRKSPETGLHSAEETGSSTNITNSGSPSMVMLQIDHPESSNAQVLADQSKILYPEIELLESHLPSVEEVGSSLNARNLGSHNKMIMQFDEPQSSNVTGVVDDSNLPYSETGFIGSFDDNDDILIPNITAWSEDYLMDFKCLNGGAIFP