AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003013

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003013.t1 MTR_2g024380 89.744 312 32 0 250 561 159 470 0.0 596
MS.gene003013.t1 MTR_2g024380 79.583 240 34 2 1 240 1 225 3.89e-97 303
MS.gene003013.t1 MTR_2g024350 89.868 227 23 0 335 561 1 227 1.32e-150 431
MS.gene003013.t1 MTR_6g053200 40.752 319 157 4 260 561 233 536 5.55e-70 234
MS.gene003013.t1 MTR_6g053200 51.613 93 39 1 1 87 1 93 7.79e-16 80.9
MS.gene003013.t1 MTR_7g104980 53.769 199 91 1 363 561 18 215 2.66e-58 194
MS.gene003013.t1 MTR_8g067650 37.920 327 132 7 265 560 233 519 3.17e-57 200
MS.gene003013.t1 MTR_8g067635 34.946 372 169 6 175 474 134 504 4.04e-55 195
MS.gene003013.t1 MTR_1g099600 52.941 102 46 2 319 420 163 262 2.26e-30 121
MS.gene003013.t1 MTR_7g079040 45.794 107 57 1 310 416 122 227 1.66e-25 107
MS.gene003013.t1 MTR_8g028565 45.690 116 57 4 308 420 122 234 2.12e-25 107
MS.gene003013.t1 MTR_7g105000 42.667 150 48 3 241 362 201 340 7.08e-24 103
MS.gene003013.t1 MTR_7g105000 54.762 84 37 1 1 84 1 83 9.29e-12 67.0
MS.gene003013.t1 MTR_1g070455 66.102 59 20 0 343 401 294 352 3.14e-22 99.0
MS.gene003013.t1 MTR_4g052030 68.852 61 7 1 340 400 3 51 3.96e-21 87.0
MS.gene003013.t1 MTR_3g108960 42.857 91 51 1 318 407 289 379 8.62e-21 95.1
MS.gene003013.t1 MTR_8g098945 53.425 73 33 1 343 415 130 201 8.74e-21 92.8
MS.gene003013.t1 MTR_8g087000 60.000 60 24 0 343 402 78 137 1.35e-20 91.7
MS.gene003013.t1 MTR_4g127040 57.143 63 27 0 339 401 242 304 1.57e-20 93.2
MS.gene003013.t1 MTR_8g087000 60.000 60 24 0 343 402 77 136 1.76e-20 91.3
MS.gene003013.t1 MTR_2g032030 52.778 72 33 1 343 414 268 338 1.94e-20 94.4
MS.gene003013.t1 MTR_4g094908 62.069 58 22 0 343 400 267 324 2.62e-20 92.8
MS.gene003013.t1 MTR_2g032030 52.778 72 33 1 343 414 268 338 3.48e-20 94.0
MS.gene003013.t1 MTR_2g083870 60.000 60 24 0 343 402 81 140 7.55e-20 89.7
MS.gene003013.t1 MTR_5g016610 60.345 58 23 0 343 400 200 257 7.98e-20 90.1
MS.gene003013.t1 MTR_2g016770 60.000 60 24 0 343 402 36 95 1.49e-19 87.8
MS.gene003013.t1 MTR_2g016770 60.000 60 24 0 343 402 28 87 1.61e-19 87.4
MS.gene003013.t1 MTR_1g009613 63.158 57 21 0 343 399 263 319 3.51e-19 89.4
MS.gene003013.t1 MTR_7g109600 50.725 69 34 0 335 403 46 114 2.57e-18 85.5
MS.gene003013.t1 MTR_1g086790 43.333 90 49 2 322 411 139 226 4.50e-18 85.9
MS.gene003013.t1 MTR_0117s0040 53.125 64 30 0 336 399 68 131 5.40e-18 84.0
MS.gene003013.t1 MTR_2g045360 36.752 117 66 3 287 402 162 271 6.54e-18 86.7
MS.gene003013.t1 MTR_3g053330 50.000 60 30 0 343 402 252 311 2.25e-17 85.5
MS.gene003013.t1 MTR_4g094588 48.684 76 37 2 328 403 165 238 9.48e-17 82.0
MS.gene003013.t1 MTR_7g100510 49.425 87 42 2 327 413 174 258 1.19e-16 82.8
MS.gene003013.t1 MTR_7g100510 37.624 101 48 2 319 405 324 423 3.47e-15 78.6
MS.gene003013.t1 MTR_3g106060 50.847 59 29 0 342 400 138 196 1.49e-16 80.9
MS.gene003013.t1 MTR_7g011820 53.731 67 30 1 337 403 405 470 2.59e-16 82.4
MS.gene003013.t1 MTR_7g011820 50.704 71 33 2 338 408 224 292 1.71e-15 79.7
MS.gene003013.t1 MTR_7g110720 48.485 66 34 0 337 402 184 249 3.29e-16 81.3
MS.gene003013.t1 MTR_3g056100 47.945 73 37 1 335 407 395 466 3.53e-16 82.0
MS.gene003013.t1 MTR_3g056100 37.374 99 56 3 338 432 239 335 3.41e-11 66.2
MS.gene003013.t1 MTR_7g110720 48.485 66 34 0 337 402 211 276 3.61e-16 81.3
MS.gene003013.t1 MTR_3g056100 47.945 73 37 1 335 407 408 479 3.82e-16 82.0
MS.gene003013.t1 MTR_3g056100 43.243 74 40 2 338 411 239 310 3.56e-11 66.2
MS.gene003013.t1 MTR_5g094430 49.275 69 34 1 335 403 357 424 4.78e-16 81.6
MS.gene003013.t1 MTR_5g094430 48.387 62 30 2 341 402 199 258 6.95e-11 65.1
MS.gene003013.t1 MTR_3g056100 47.945 73 37 1 335 407 251 322 5.25e-16 80.9
MS.gene003013.t1 MTR_3g056100 37.374 99 56 3 338 432 95 191 5.69e-11 65.1
MS.gene003013.t1 MTR_3g056100 47.945 73 37 1 335 407 264 335 5.71e-16 80.9
MS.gene003013.t1 MTR_3g056100 37.234 94 53 3 338 427 95 186 6.51e-11 65.1
MS.gene003013.t1 MTR_5g094430 49.275 69 34 1 335 403 245 312 6.75e-16 80.5
MS.gene003013.t1 MTR_5g094430 49.275 69 34 1 335 403 223 290 7.05e-16 80.5
MS.gene003013.t1 MTR_1g013790 47.541 61 32 0 342 402 101 161 7.88e-16 78.2
MS.gene003013.t1 MTR_5g042920 50.704 71 34 1 337 407 315 384 8.08e-16 80.5
MS.gene003013.t1 MTR_5g042920 52.174 69 31 2 338 406 147 213 2.59e-14 75.5
MS.gene003013.t1 MTR_4g132430 45.455 66 36 0 337 402 122 187 1.21e-15 79.0
MS.gene003013.t1 MTR_2g088000 46.970 66 35 0 337 402 344 409 1.86e-15 79.7
MS.gene003013.t1 MTR_4g082580 49.275 69 34 1 339 407 275 342 2.14e-15 78.6
MS.gene003013.t1 MTR_4g082580 38.235 102 51 3 334 426 137 235 1.11e-11 67.0
MS.gene003013.t1 MTR_2g023930 45.455 66 36 0 337 402 300 365 2.64e-15 79.3
MS.gene003013.t1 MTR_3g031220 56.061 66 27 2 341 406 197 260 2.65e-15 78.2
MS.gene003013.t1 MTR_3g009470 45.977 87 39 3 341 421 279 363 3.13e-15 79.3
MS.gene003013.t1 MTR_3g009470 49.254 67 33 1 337 403 490 555 3.44e-14 76.3
MS.gene003013.t1 MTR_4g007060 47.541 61 32 0 342 402 128 188 3.92e-15 76.6
MS.gene003013.t1 MTR_3g031220 56.061 66 27 2 341 406 197 260 4.06e-15 78.6
MS.gene003013.t1 MTR_3g031220 50.820 61 29 1 343 403 366 425 9.96e-14 74.3
MS.gene003013.t1 MTR_3g009470 50.000 72 34 2 341 412 279 348 4.37e-15 78.6
MS.gene003013.t1 MTR_4g132430 45.455 66 36 0 337 402 256 321 4.49e-15 78.2
MS.gene003013.t1 MTR_4g007060 47.541 61 32 0 342 402 162 222 4.50e-15 76.6
MS.gene003013.t1 MTR_4g107970 50.000 60 30 0 343 402 179 238 5.36e-15 78.2
MS.gene003013.t1 MTR_2g033820 44.737 76 40 2 328 403 190 263 7.10e-15 77.0
MS.gene003013.t1 MTR_7g062220 44.318 88 41 4 329 415 113 193 7.68e-15 76.3
MS.gene003013.t1 MTR_4g049760 45.070 71 39 0 343 413 291 361 7.91e-15 77.8
MS.gene003013.t1 MTR_5g074400 50.769 65 31 1 339 403 417 480 7.96e-15 77.8
MS.gene003013.t1 MTR_5g074400 56.452 62 25 2 341 402 242 301 4.28e-14 75.5
MS.gene003013.t1 MTR_4g049790 42.857 77 44 0 337 413 307 383 8.24e-15 77.8
MS.gene003013.t1 MTR_4g107970 50.000 60 30 0 343 402 256 315 9.67e-15 77.8
MS.gene003013.t1 MTR_7g080020 46.341 82 42 2 332 413 270 349 1.18e-14 77.8
MS.gene003013.t1 MTR_7g080020 44.000 75 41 1 339 413 490 563 5.00e-14 75.5
MS.gene003013.t1 MTR_2g033110 46.961 181 55 4 1 144 1 177 1.49e-14 73.2
MS.gene003013.t1 MTR_7g009730 50.877 57 28 0 343 399 220 276 1.53e-14 77.0
MS.gene003013.t1 MTR_4g130900 46.269 67 35 1 340 406 357 422 1.56e-14 76.6
MS.gene003013.t1 MTR_7g109800 38.889 90 53 2 321 410 125 212 1.70e-14 74.7
MS.gene003013.t1 MTR_5g043880 38.776 98 58 2 313 410 96 191 1.71e-14 74.3
MS.gene003013.t1 MTR_5g097490 51.471 68 31 2 338 405 88 153 1.89e-14 75.9
MS.gene003013.t1 MTR_5g097490 49.254 67 33 1 337 403 247 312 2.63e-14 75.5
MS.gene003013.t1 MTR_4g094412 50.000 60 30 0 343 402 235 294 2.04e-14 76.3
MS.gene003013.t1 MTR_4g094412 50.000 60 30 0 343 402 244 303 2.39e-14 75.9
MS.gene003013.t1 MTR_7g071120 49.315 73 35 2 334 406 158 228 3.81e-14 75.5
MS.gene003013.t1 MTR_7g071120 51.667 60 28 1 343 402 325 383 6.50e-12 68.6
MS.gene003013.t1 MTR_7g080000 42.268 97 49 3 342 438 234 323 6.32e-14 75.1
MS.gene003013.t1 MTR_7g080000 50.820 61 29 1 343 403 433 492 1.73e-13 73.9
MS.gene003013.t1 MTR_5g091390 46.774 62 32 1 342 403 157 217 9.91e-14 72.8
MS.gene003013.t1 MTR_3g095040 43.750 64 35 1 339 402 115 177 1.10e-13 70.5
MS.gene003013.t1 MTR_1g013760 46.552 58 31 0 343 400 141 198 1.12e-13 72.0
MS.gene003013.t1 MTR_2g105060 45.161 62 34 0 342 403 94 155 1.13e-13 71.2
MS.gene003013.t1 MTR_4g013260 48.485 66 33 1 337 402 331 395 1.46e-13 73.6
MS.gene003013.t1 MTR_4g013260 42.857 77 43 1 326 402 168 243 1.17e-12 70.9
MS.gene003013.t1 MTR_2g105060 45.161 62 34 0 342 403 169 230 1.81e-13 72.0
MS.gene003013.t1 MTR_8g069935 59.259 81 31 2 1 81 1 79 2.56e-13 72.8
MS.gene003013.t1 MTR_1g015140 45.902 61 32 1 339 399 99 158 6.00e-13 67.4
MS.gene003013.t1 MTR_8g092010 43.939 66 36 1 337 402 103 167 6.43e-13 67.8
MS.gene003013.t1 MTR_4g122530 39.130 69 41 1 343 411 209 276 7.14e-13 71.2
MS.gene003013.t1 MTR_8g007270 50.000 58 28 1 343 400 155 211 8.23e-13 68.6
MS.gene003013.t1 MTR_7g079010 45.161 62 33 1 338 399 137 197 9.67e-13 68.2
MS.gene003013.t1 MTR_3g095080 40.845 71 39 2 332 400 156 225 1.02e-12 68.6
MS.gene003013.t1 MTR_8g092140 46.552 58 30 1 343 400 161 217 1.28e-12 68.2
MS.gene003013.t1 MTR_3g095080 40.845 71 39 2 332 400 132 201 1.75e-12 67.4
MS.gene003013.t1 MTR_7g028415 42.623 61 34 1 339 399 90 149 5.25e-12 64.7
MS.gene003013.t1 MTR_7g028710 42.623 61 34 1 339 399 90 149 5.25e-12 64.7
MS.gene003013.t1 MTR_1g078260 31.667 120 59 4 318 415 209 327 6.44e-12 68.6
MS.gene003013.t1 MTR_5g067680 48.276 58 28 1 342 397 202 259 8.99e-12 67.4
MS.gene003013.t1 MTR_1g077780 46.154 65 34 1 339 403 59 122 1.16e-11 63.2
MS.gene003013.t1 MTR_6g086555 43.662 71 37 3 337 406 202 270 2.34e-11 66.2
MS.gene003013.t1 MTR_3g104750 44.444 63 34 1 337 399 99 160 3.34e-11 62.4
MS.gene003013.t1 MTR_8g099350 36.471 85 48 2 319 397 105 189 7.79e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003013.t1 AT5G52830 52.525 99 45 2 319 417 143 239 4.92e-27 112
MS.gene003013.t1 AT4G01250 46.392 97 51 1 320 416 106 201 3.31e-25 106
MS.gene003013.t1 AT5G28650 64.407 59 21 0 343 401 263 321 5.68e-22 97.8
MS.gene003013.t1 AT3G04670 64.407 59 21 0 343 401 263 321 9.44e-22 97.1
MS.gene003013.t1 AT2G24570 59.091 66 27 0 343 408 244 309 2.37e-21 95.5
MS.gene003013.t1 AT4G23550 46.154 91 48 1 326 416 124 213 2.75e-21 95.1
MS.gene003013.t1 AT4G31550 44.681 94 49 1 318 408 218 311 3.71e-21 95.1
MS.gene003013.t1 AT4G31550 57.576 66 28 0 343 408 247 312 4.58e-21 94.7
MS.gene003013.t1 AT5G45050 43.878 98 53 2 315 411 1013 1109 1.07e-20 97.1
MS.gene003013.t1 AT5G45050 43.878 98 53 2 315 411 1152 1248 1.11e-20 97.1
MS.gene003013.t1 AT5G45050 43.878 98 53 2 315 411 1124 1220 1.27e-20 97.1
MS.gene003013.t1 AT2G23320 62.069 58 22 0 343 400 241 298 2.19e-20 92.8
MS.gene003013.t1 AT4G24240 43.269 104 55 2 301 400 236 339 2.68e-20 93.2
MS.gene003013.t1 AT2G30590 48.235 85 41 1 320 401 288 372 6.65e-20 92.4
MS.gene003013.t1 AT2G34830 55.072 69 30 1 343 411 216 283 6.87e-20 92.8
MS.gene003013.t1 AT2G34830 55.072 69 30 1 343 411 225 292 7.29e-20 92.8
MS.gene003013.t1 AT1G29280 45.055 91 41 1 321 402 44 134 1.60e-19 89.0
MS.gene003013.t1 AT1G30650 53.623 69 31 1 343 411 218 285 4.95e-19 90.1
MS.gene003013.t1 AT3G58710 37.391 115 58 2 343 443 71 185 6.70e-19 87.4
MS.gene003013.t1 AT3G58710 53.846 65 30 0 343 407 72 136 7.28e-19 87.4
MS.gene003013.t1 AT3G01080 54.545 66 29 1 337 402 339 403 6.03e-17 84.0
MS.gene003013.t1 AT3G01080 40.206 97 47 4 338 429 201 291 1.30e-14 76.6
MS.gene003013.t1 AT3G01080 54.545 66 29 1 337 402 301 365 8.23e-17 83.2
MS.gene003013.t1 AT3G01080 40.206 97 47 4 338 429 163 253 1.61e-14 76.3
MS.gene003013.t1 AT2G47260 36.667 120 65 3 321 440 154 262 2.09e-16 81.3
MS.gene003013.t1 AT2G03340 53.030 66 30 1 337 402 410 474 2.40e-16 82.4
MS.gene003013.t1 AT2G03340 48.571 70 34 2 338 407 246 313 3.23e-13 72.8
MS.gene003013.t1 AT4G22070 50.000 60 30 0 343 402 298 357 6.94e-16 81.3
MS.gene003013.t1 AT4G22070 50.000 60 30 0 343 402 298 357 6.94e-16 81.3
MS.gene003013.t1 AT4G22070 50.000 60 30 0 343 402 298 357 6.94e-16 81.3
MS.gene003013.t1 AT4G22070 50.000 60 30 0 343 402 298 357 6.94e-16 81.3
MS.gene003013.t1 AT1G62300 50.000 60 30 0 343 402 313 372 7.14e-16 81.3
MS.gene003013.t1 AT1G69810 44.872 78 42 1 337 413 140 217 8.06e-16 79.3
MS.gene003013.t1 AT1G69810 45.833 72 38 1 343 413 204 275 9.08e-16 79.7
MS.gene003013.t1 AT4G04450 50.000 60 30 0 343 402 199 258 1.28e-15 79.7
MS.gene003013.t1 AT1G13960 51.515 66 31 1 337 402 404 468 1.31e-15 80.1
MS.gene003013.t1 AT1G13960 45.570 79 37 3 324 402 215 287 2.44e-13 73.2
MS.gene003013.t1 AT2G38470 50.000 76 36 2 327 402 169 242 2.21e-15 79.3
MS.gene003013.t1 AT2G38470 55.000 60 26 1 343 402 363 421 6.53e-15 78.2
MS.gene003013.t1 AT4G04450 50.000 60 30 0 343 402 293 352 2.24e-15 79.3
MS.gene003013.t1 AT1G13960 51.515 66 31 1 337 402 251 315 3.19e-15 77.8
MS.gene003013.t1 AT1G13960 45.570 79 37 3 324 402 62 134 9.28e-13 70.5
MS.gene003013.t1 AT3G01080 40.206 97 47 4 338 429 201 291 4.12e-15 77.0
MS.gene003013.t1 AT4G18170 43.902 82 44 2 322 403 153 232 4.43e-15 77.0
MS.gene003013.t1 AT4G26640 47.826 69 35 1 335 403 334 401 4.60e-15 78.6
MS.gene003013.t1 AT4G26640 37.143 105 59 4 340 441 169 269 4.33e-11 65.9
MS.gene003013.t1 AT4G26640 47.826 69 35 1 335 403 374 441 5.90e-15 78.2
MS.gene003013.t1 AT4G26640 37.143 105 59 4 340 441 209 309 4.92e-11 65.9
MS.gene003013.t1 AT4G26640 47.826 69 35 1 335 403 198 265 6.42e-15 77.0
MS.gene003013.t1 AT4G26640 37.143 105 59 4 340 441 33 133 6.15e-11 64.7
MS.gene003013.t1 AT4G26640 47.826 69 35 1 335 403 198 265 6.42e-15 77.0
MS.gene003013.t1 AT4G26640 37.143 105 59 4 340 441 33 133 6.15e-11 64.7
MS.gene003013.t1 AT4G26640 47.826 69 35 1 335 403 198 265 6.42e-15 77.0
MS.gene003013.t1 AT4G26640 37.143 105 59 4 340 441 33 133 6.15e-11 64.7
MS.gene003013.t1 AT4G26640 47.826 69 35 1 335 403 198 265 6.42e-15 77.0
MS.gene003013.t1 AT4G26640 37.143 105 59 4 340 441 33 133 6.15e-11 64.7
MS.gene003013.t1 AT1G29860 46.053 76 39 2 328 403 123 196 6.46e-15 75.9
MS.gene003013.t1 AT4G26640 47.826 69 35 1 335 403 302 369 6.79e-15 77.8
MS.gene003013.t1 AT4G26640 37.143 105 59 4 340 441 137 237 6.23e-11 65.5
MS.gene003013.t1 AT5G43290 55.000 60 26 1 340 399 112 170 8.25e-15 75.5
MS.gene003013.t1 AT2G04880 51.667 60 28 1 343 402 308 366 8.83e-15 77.4
MS.gene003013.t1 AT2G04880 51.667 60 28 1 343 402 284 342 9.09e-15 77.4
MS.gene003013.t1 AT1G18860 50.000 60 30 0 343 402 240 299 1.08e-14 77.4
MS.gene003013.t1 AT1G64000 44.444 63 34 1 337 399 109 170 1.46e-14 72.8
MS.gene003013.t1 AT1G69310 39.130 92 54 2 319 410 125 214 1.72e-14 74.7
MS.gene003013.t1 AT1G69310 39.130 92 54 2 319 410 125 214 1.72e-14 74.7
MS.gene003013.t1 AT1G69310 39.130 92 54 2 319 410 125 214 1.72e-14 74.7
MS.gene003013.t1 AT5G07100 48.529 68 34 1 343 410 235 301 1.82e-14 75.1
MS.gene003013.t1 AT5G07100 35.345 116 68 3 335 444 110 224 4.72e-13 70.9
MS.gene003013.t1 AT5G15130 48.333 60 31 0 343 402 186 245 1.90e-14 76.6
MS.gene003013.t1 AT1G80840 43.548 62 35 0 342 403 146 207 1.91e-14 74.7
MS.gene003013.t1 AT5G15130 48.333 60 31 0 343 402 228 287 2.08e-14 76.6
MS.gene003013.t1 AT5G46350 44.737 76 40 2 328 403 170 243 2.59e-14 74.7
MS.gene003013.t1 AT1G68150 50.000 60 30 0 343 402 236 295 2.74e-14 75.1
MS.gene003013.t1 AT5G26170 50.000 64 31 1 337 400 108 170 2.80e-14 71.6
MS.gene003013.t1 AT2G37260 54.545 66 28 2 338 403 161 224 2.88e-14 75.5
MS.gene003013.t1 AT2G37260 40.476 84 46 2 319 399 323 405 2.99e-14 75.5
MS.gene003013.t1 AT2G30250 50.820 61 29 1 343 403 329 388 3.96e-14 74.7
MS.gene003013.t1 AT2G30250 45.570 79 40 3 328 406 153 228 1.56e-12 70.1
MS.gene003013.t1 AT5G07100 48.529 68 34 1 343 410 142 208 4.26e-14 72.0
MS.gene003013.t1 AT5G07100 35.345 116 68 3 335 444 17 131 1.45e-12 67.8
MS.gene003013.t1 AT5G07100 48.529 68 34 1 343 410 142 208 4.26e-14 72.0
MS.gene003013.t1 AT5G07100 35.345 116 68 3 335 444 17 131 1.45e-12 67.8
MS.gene003013.t1 AT5G07100 48.529 68 34 1 343 410 142 208 4.26e-14 72.0
MS.gene003013.t1 AT5G07100 35.345 116 68 3 335 444 17 131 1.45e-12 67.8
MS.gene003013.t1 AT5G07100 48.529 68 34 1 343 410 142 208 4.26e-14 72.0
MS.gene003013.t1 AT5G07100 35.345 116 68 3 335 444 17 131 1.45e-12 67.8
MS.gene003013.t1 AT2G37260 54.545 66 28 2 338 403 81 144 4.43e-14 74.3
MS.gene003013.t1 AT2G37260 40.476 84 46 2 319 399 243 325 5.12e-14 73.9
MS.gene003013.t1 AT4G30935 47.692 65 33 1 343 407 332 395 4.46e-14 75.1
MS.gene003013.t1 AT2G37260 54.545 66 28 2 338 403 79 142 4.64e-14 74.3
MS.gene003013.t1 AT2G37260 40.476 84 46 2 319 399 241 323 5.22e-14 73.9
MS.gene003013.t1 AT4G31800 44.262 61 34 0 342 402 111 171 5.59e-14 72.4
MS.gene003013.t1 AT4G01720 48.333 60 31 0 343 402 240 299 5.63e-14 75.1
MS.gene003013.t1 AT5G56270 52.459 61 28 1 343 403 488 547 6.34e-14 75.1
MS.gene003013.t1 AT5G56270 50.000 66 31 2 341 406 272 335 3.91e-13 72.8
MS.gene003013.t1 AT5G41570 44.444 63 34 1 337 399 93 154 7.12e-14 70.5
MS.gene003013.t1 AT5G49520 48.333 60 30 1 343 402 222 280 1.06e-13 73.6
MS.gene003013.t1 AT4G31800 44.262 61 34 0 342 402 176 236 1.29e-13 72.4
MS.gene003013.t1 AT3G62340 38.636 88 46 3 343 429 119 199 1.72e-13 71.6
MS.gene003013.t1 AT4G26440 46.575 73 37 2 341 413 177 247 1.81e-13 73.6
MS.gene003013.t1 AT4G26440 42.254 71 40 1 343 413 373 442 1.74e-11 67.4
MS.gene003013.t1 AT2G44745 50.877 57 27 1 343 399 146 201 2.80e-13 69.7
MS.gene003013.t1 AT2G21900 47.541 61 31 1 343 403 110 169 8.49e-13 68.2
MS.gene003013.t1 AT1G55600 41.096 73 41 2 331 402 295 366 9.51e-13 71.2
MS.gene003013.t1 AT2G25000 42.623 61 35 0 342 402 103 163 1.50e-12 67.8
MS.gene003013.t1 AT2G25000 42.623 61 35 0 342 402 103 163 1.50e-12 67.8
MS.gene003013.t1 AT2G25000 42.623 61 35 0 342 402 125 185 1.60e-12 68.2
MS.gene003013.t1 AT5G45260 46.970 66 33 1 343 406 1209 1274 1.60e-12 71.2
MS.gene003013.t1 AT2G25000 42.623 61 35 0 342 402 146 206 4.60e-12 67.0
MS.gene003013.t1 AT3G01970 47.692 65 31 2 343 405 66 129 4.71e-12 64.3
MS.gene003013.t1 AT4G39410 40.845 71 39 2 332 400 211 280 4.92e-12 67.4
MS.gene003013.t1 AT5G13080 43.860 57 31 1 343 399 68 123 6.94e-12 63.9
MS.gene003013.t1 AT2G40740 39.286 84 46 2 319 397 147 230 3.09e-11 65.1
MS.gene003013.t1 AT2G40740 39.286 84 46 2 319 397 156 239 3.85e-11 64.7
MS.gene003013.t1 AT2G46130 45.614 57 30 1 343 399 31 86 3.99e-11 60.5
MS.gene003013.t1 AT4G12020 30.682 176 93 7 338 512 397 544 5.43e-11 66.2
MS.gene003013.t1 AT4G12020 30.682 176 93 7 338 512 464 611 5.69e-11 66.2
MS.gene003013.t1 AT4G12020 30.682 176 93 7 338 512 464 611 5.69e-11 66.2
MS.gene003013.t1 AT4G12020 30.682 176 93 7 338 512 464 611 5.76e-11 66.2
MS.gene003013.t1 AT4G12020 30.682 176 93 7 338 512 464 611 6.72e-11 65.9
MS.gene003013.t1 AT4G12020 30.682 176 93 7 338 512 464 611 6.72e-11 65.9
MS.gene003013.t1 AT4G12020 30.682 176 93 7 338 512 464 611 7.98e-11 65.9
MS.gene003013.t1 AT4G12020 30.682 176 93 7 338 512 464 611 8.18e-11 65.9
MS.gene003013.t1 AT4G12020 30.682 176 93 7 338 512 464 611 8.18e-11 65.9
MS.gene003013.t1 AT4G12020 30.682 176 93 7 338 512 464 611 8.24e-11 65.9

Find 150 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACAAACATCACAAATTT+AGG 0.187343 2.2:-61710973 MS.gene003013:CDS
GTTGGTGGTGCTGGTGGTGG+TGG 0.202175 2.2:+61712347 None:intergenic
AAATTTAGGTTCGCCTAATA+TGG 0.236187 2.2:-61710959 MS.gene003013:CDS
GGTTGTGGTGGCAGTGATAA+TGG 0.263983 2.2:+61712206 None:intergenic
ATGAGTCCAGTTTCAGAATA+AGG 0.269380 2.2:+61710709 None:intergenic
GGTGGGGATGGTGGTGGTCA+AGG 0.277140 2.2:+61712311 None:intergenic
GGTGGTGCTGGTGGTGGTGG+GGG 0.282046 2.2:+61712350 None:intergenic
TGGTGGTGCTGGTGGTGGTG+GGG 0.299381 2.2:+61712349 None:intergenic
GGTGATGTGGGTGGGGATGG+TGG 0.303024 2.2:+61712302 None:intergenic
ATGCTAGTGGTAGCTGGGGT+GGG 0.308047 2.2:+61712402 None:intergenic
TCGTGGGCGTGGAGGAAATA+TGG 0.318270 2.2:-61711510 MS.gene003013:CDS
GAGTATTGGAAAATTATATT+TGG 0.320543 2.2:+61711861 None:intergenic
TATAATTTCCGAATACTTGC+TGG 0.320932 2.2:-61712084 MS.gene003013:CDS
ATCTGTAACATAACCATATT+AGG 0.323182 2.2:+61710946 None:intergenic
TGGGGATGGTGGTGGTCAAG+GGG 0.326902 2.2:+61712313 None:intergenic
TGATAGGGGTAGTGGTGGTC+GGG 0.328659 2.2:+61712172 None:intergenic
GTTGTGGTGGCAGTGATAAT+GGG 0.330481 2.2:+61712207 None:intergenic
ATGAAGTCATTTGGTTTAAG+TGG 0.330576 2.2:+61712462 None:intergenic
TTGGTGGTGCTGGTGGTGGT+GGG 0.333587 2.2:+61712348 None:intergenic
GTGGGGATGGTGGTGGTCAA+GGG 0.334475 2.2:+61712312 None:intergenic
ATCAATGCATGCAACAGGTT+TGG 0.338091 2.2:+61711789 None:intergenic
ATCAATGCATGCAACAGGTT+TGG 0.338091 2.2:+61712017 None:intergenic
TGAGATAGTGTTGGTGGTGC+TGG 0.338766 2.2:+61712338 None:intergenic
CACTATGCAGATCGAGAAAA+AGG 0.340622 2.2:-61711720 MS.gene003013:intron
AAGTATTCGGAAATTATAAT+TGG 0.345263 2.2:+61712089 None:intergenic
CAGTCTCTGGTGACTTGCGC+TGG 0.347837 2.2:+61711025 None:intergenic
GGGGATGGTGGTGGTCAAGG+GGG 0.349141 2.2:+61712314 None:intergenic
TGATTGGGGTAGTGGTGGTC+GGG 0.349837 2.2:+61711944 None:intergenic
AACCTCCCTTATTCTGAAAC+TGG 0.353308 2.2:-61710715 MS.gene003013:CDS
AGTGGTAGCTGGGGTGGGGA+TGG 0.355836 2.2:+61712407 None:intergenic
TCAATGCATGCAACAGGTTT+GGG 0.360204 2.2:+61711790 None:intergenic
TCAATGCATGCAACAGGTTT+GGG 0.360204 2.2:+61712018 None:intergenic
GATGTGGGTGGGGATGGTGG+TGG 0.361535 2.2:+61712305 None:intergenic
TTTGGCATGCTAGTGGTAGC+TGG 0.363947 2.2:+61712396 None:intergenic
TCTAGATCTATGAAGTCATT+TGG 0.366608 2.2:+61712453 None:intergenic
ATAATTGGTGGGATATTGAT+TGG 0.368833 2.2:+61712104 None:intergenic
TATTCTGAAACTGGACTCAT+TGG 0.369961 2.2:-61710706 MS.gene003013:CDS
TTGAGGGAATGTGATGTTAT+TGG 0.370353 2.2:+61712551 None:intergenic
ATATTTGGTGAGATATTGAT+TGG 0.376688 2.2:+61711876 None:intergenic
GTTGGTGATGTGGGTGGGGA+TGG 0.376997 2.2:+61712299 None:intergenic
TCTGACCAAGCTGTTATGTT+TGG 0.377584 2.2:+61710652 None:intergenic
TTGGTCAGAAGATTATTTAA+TGG 0.378102 2.2:-61710638 MS.gene003013:CDS
GTGGTAGCTGGGGTGGGGAT+GGG 0.379684 2.2:+61712408 None:intergenic
CATGCTAGTGGTAGCTGGGG+TGG 0.382365 2.2:+61712401 None:intergenic
GTTGTTGTCCAGCAAGTATT+CGG 0.385639 2.2:+61712076 None:intergenic
TGCTCGTAGCAGATATGATT+GGG 0.388493 2.2:+61711929 None:intergenic
GTGATAGGGGTAGTGGTGGT+CGG 0.394478 2.2:+61712171 None:intergenic
GTGGTGGTGGTATTGAATTT+TGG 0.397057 2.2:+61712378 None:intergenic
CCACAAAGTAGGAATGTTAC+AGG 0.397474 2.2:-61710754 MS.gene003013:CDS
TTGGTAGTGGTTTCGATTTG+AGG 0.403044 2.2:+61712570 None:intergenic
TAATGTTGGTGATGTGGGTG+GGG 0.404886 2.2:+61712295 None:intergenic
TTGATTGATCAGCGAGAACC+TGG 0.406949 2.2:+61710899 None:intergenic
TGCTAGTGGTAGCTGGGGTG+GGG 0.407926 2.2:+61712403 None:intergenic
TTTAATAAGAATGTTGTTGT+TGG 0.409716 2.2:-61711054 MS.gene003013:CDS
CAAAATGGTGTGACACTTTG+AGG 0.411481 2.2:+61712534 None:intergenic
TTAATGTTGGTGATGTGGGT+GGG 0.412823 2.2:+61712294 None:intergenic
GTGCTCGCAACAGATGTGAT+AGG 0.414305 2.2:+61712156 None:intergenic
AGTGTTGGTGGTGCTGGTGG+TGG 0.418934 2.2:+61712344 None:intergenic
CCTGTAACATTCCTACTTTG+TGG 0.419186 2.2:+61710754 None:intergenic
TTAAGTGGGGCGAAAGAGAC+TGG 0.426862 2.2:+61712477 None:intergenic
GTGATATCAATGCATGCAAC+AGG 0.433021 2.2:+61711784 None:intergenic
GGAATGTTACAGGTGTTGTC+GGG 0.434516 2.2:-61710744 MS.gene003013:CDS
ATGATTGGGGTAGTGGTGGT+CGG 0.440238 2.2:+61711943 None:intergenic
GTAAGATTATCAGAGCAAAA+TGG 0.441277 2.2:+61712519 None:intergenic
ACAACATTCTTATTAAATGT+TGG 0.443200 2.2:+61711060 None:intergenic
TTGTGGTGGCAGTGATAATG+GGG 0.443656 2.2:+61712208 None:intergenic
GTGCTCGTAGCAGATATGAT+TGG 0.445306 2.2:+61711928 None:intergenic
TGAGTCCAGTTTCAGAATAA+GGG 0.453523 2.2:+61710710 None:intergenic
GATCCAACTTCTTCGACAAC+AGG 0.455140 2.2:+61710835 None:intergenic
TATAACACATCAATGCCATT+TGG 0.456145 2.2:+61711559 None:intergenic
CAGCGCAAGTCACCAGAGAC+TGG 0.456474 2.2:-61711024 MS.gene003013:CDS
TATGTTACAGATTGATCATC+CGG 0.457458 2.2:-61710935 MS.gene003013:CDS
GAATGTGATGTTATTGGTAG+TGG 0.458828 2.2:+61712557 None:intergenic
GTGATATCAATGCATGCAAC+AGG 0.463584 2.2:+61712012 None:intergenic
GGGAGTGGTGGGAGTAGTGA+TGG 0.464500 2.2:+61712242 None:intergenic
TGTTGTTGTCCAGCGAGTAT+TGG 0.468656 2.2:+61711847 None:intergenic
GTTAATGTTGGTGATGTGGG+TGG 0.469111 2.2:+61712293 None:intergenic
ACCTGGGCATTGCTGCTCTC+CGG 0.469412 2.2:+61710916 None:intergenic
AGCAGATATGATTGGGGTAG+TGG 0.472211 2.2:+61711936 None:intergenic
TTACCTGTTGTCGAAGAAGT+TGG 0.474676 2.2:-61710838 MS.gene003013:CDS
CGGGGTGATTATAGTGGTTG+TGG 0.477731 2.2:+61712191 None:intergenic
GGTAATGGTAGAGGGAGTGG+TGG 0.480162 2.2:+61712230 None:intergenic
GTTTCGATTTGAGGTGGCGG+TGG 0.486220 2.2:+61712579 None:intergenic
TGAAGTCATTTGGTTTAAGT+GGG 0.491925 2.2:+61712463 None:intergenic
TTACACTCTGCAGAAGAAGC+TGG 0.498625 2.2:-61711000 MS.gene003013:CDS
ATGGACTTCAACCGCCTCAA+TGG 0.499646 2.2:-61710619 MS.gene003013:CDS
TTGGCATGCTAGTGGTAGCT+GGG 0.501646 2.2:+61712397 None:intergenic
TGCTCGCAACAGATGTGATA+GGG 0.504965 2.2:+61712157 None:intergenic
ACTTATATTGTGACATATGA+AGG 0.505269 2.2:-61711102 MS.gene003013:CDS
TATTCGGAAATTATAATTGG+TGG 0.506758 2.2:+61712092 None:intergenic
AGGAATGTTACAGGTGTTGT+CGG 0.507063 2.2:-61710745 MS.gene003013:CDS
TGGCATTGATGTGTTATATG+AGG 0.512049 2.2:-61711554 MS.gene003013:CDS
GCAGAGTGTAATCCAGTCTC+TGG 0.513748 2.2:+61711012 None:intergenic
AGTGGTGGGAGTAGTGATGG+TGG 0.515197 2.2:+61712245 None:intergenic
TAGAAAACATAATAACCAAA+TGG 0.516057 2.2:-61711574 MS.gene003013:CDS
AGTCTCTGGTGACTTGCGCT+GGG 0.516218 2.2:+61711026 None:intergenic
GTGGTGGGAGTAGTGATGGT+GGG 0.519264 2.2:+61712246 None:intergenic
GAGTAGTGATGGTGGGAGTG+TGG 0.520200 2.2:+61712253 None:intergenic
GATTGGGGTAGTGGTGGTCG+GGG 0.520285 2.2:+61711945 None:intergenic
GGTGTTAATGTTGGTGATGT+GGG 0.527208 2.2:+61712290 None:intergenic
AACAGATGTGATAGGGGTAG+TGG 0.528816 2.2:+61712164 None:intergenic
TCCGGAGAGCAGCAATGCCC+AGG 0.531466 2.2:-61710917 MS.gene003013:CDS
GGTGGTAGGAGTAGTAAAAG+TGG 0.531469 2.2:+61712614 None:intergenic
TGGTGTTAATGTTGGTGATG+TGG 0.531937 2.2:+61712289 None:intergenic
ATTCGGAAATTATAATTGGT+GGG 0.535054 2.2:+61712093 None:intergenic
GATAGGGGTAGTGGTGGTCG+GGG 0.546614 2.2:+61712173 None:intergenic
GGTGGTCGGGGTGATTATAG+TGG 0.549679 2.2:+61712185 None:intergenic
AAAATGGTGTGACACTTTGA+GGG 0.550963 2.2:+61712535 None:intergenic
TTTCAAAAGACTCGTGGGCG+TGG 0.554710 2.2:-61711521 MS.gene003013:CDS
GTAATGGTAGAGGGAGTGGT+GGG 0.555015 2.2:+61712231 None:intergenic
TGATACCAAACATAACAGCT+TGG 0.570214 2.2:-61710657 MS.gene003013:CDS
TTAAAGGGTCTCCACATCCA+AGG 0.571232 2.2:-61711476 MS.gene003013:intron
TGATTGTCCAGCAAGAAGAA+AGG 0.574441 2.2:-61711151 MS.gene003013:CDS
TCGGGGTGATAGCTGATGGA+TGG 0.591717 2.2:+61711962 None:intergenic
TGGCATGCTAGTGGTAGCTG+GGG 0.593736 2.2:+61712398 None:intergenic
GATAGTGTTGGTGGTGCTGG+TGG 0.594465 2.2:+61712341 None:intergenic
GTGGTTTCGATTTGAGGTGG+CGG 0.594576 2.2:+61712576 None:intergenic
GACTTCAACCGCCTCAATGG+TGG 0.595091 2.2:-61710616 MS.gene003013:CDS
GTAGTGGTTTCGATTTGAGG+TGG 0.597682 2.2:+61712573 None:intergenic
GGAATATAGCACCACCATTG+AGG 0.603269 2.2:+61710605 None:intergenic
AATTTGATGAACCACAAAGT+AGG 0.604187 2.2:-61710765 MS.gene003013:CDS
ATGAACACTAGTCTTTGTCA+TGG 0.605141 2.2:+61711903 None:intergenic
ATGAACACTGGTGTTAATGT+TGG 0.608499 2.2:+61712281 None:intergenic
GGCATTGATGTGTTATATGA+GGG 0.611463 2.2:-61711553 MS.gene003013:CDS
GTGGTCGGGGTGATAGCTGA+TGG 0.611835 2.2:+61711958 None:intergenic
ATGAACACTAGTGTTTGTCA+TGG 0.612356 2.2:+61712131 None:intergenic
GTCCAGTTTCAGAATAAGGG+AGG 0.616537 2.2:+61710713 None:intergenic
ATATGTGTAAACCTTGGATG+TGG 0.620653 2.2:+61711465 None:intergenic
GCTATTACAAATGTAGCACT+TGG 0.620926 2.2:-61711176 MS.gene003013:CDS
TGCATAGTGCAACTGATGGA+TGG 0.623878 2.2:+61711734 None:intergenic
CAAAAGACTCGTGGGCGTGG+AGG 0.623998 2.2:-61711518 MS.gene003013:CDS
CTCTGGTGACTTGCGCTGGG+AGG 0.626715 2.2:+61711029 None:intergenic
GAAGTCATTTGGTTTAAGTG+GGG 0.628529 2.2:+61712464 None:intergenic
TGAGCTTTCAAAAGACTCGT+GGG 0.628685 2.2:-61711526 MS.gene003013:CDS
ATTGATGTGTTATATGAGGG+AGG 0.631085 2.2:-61711550 MS.gene003013:CDS
GATCTGCATAGTGCAACTGA+TGG 0.634706 2.2:+61711730 None:intergenic
GAATGTTACAGGTGTTGTCG+GGG 0.638149 2.2:-61710743 MS.gene003013:CDS
ATGAGCTTTCAAAAGACTCG+TGG 0.638619 2.2:-61711527 MS.gene003013:CDS
AGATGTGATAGGGGTAGTGG+TGG 0.641506 2.2:+61712167 None:intergenic
AGATATGATTGGGGTAGTGG+TGG 0.642708 2.2:+61711939 None:intergenic
TGATTGATCAGCGAGAACCT+GGG 0.643075 2.2:+61710900 None:intergenic
GGTGATTATAGTGGTTGTGG+TGG 0.648806 2.2:+61712194 None:intergenic
GTATGCACGTTCAAAATGAG+CGG 0.654003 2.2:+61711759 None:intergenic
GCTCGCAACAGATGTGATAG+GGG 0.666943 2.2:+61712158 None:intergenic
GTATGCACATTCAAAATGAG+TGG 0.673260 2.2:+61711987 None:intergenic
TATGCACATTCAAAATGAGT+GGG 0.679056 2.2:+61711988 None:intergenic
ATATAGCACCACCATTGAGG+CGG 0.679111 2.2:+61710608 None:intergenic
TGTGGTGGCAGTGATAATGG+GGG 0.691274 2.2:+61712209 None:intergenic
GCTCGTAGCAGATATGATTG+GGG 0.709067 2.2:+61711930 None:intergenic
AGTGTGGATAACATGAACAC+TGG 0.712481 2.2:+61712269 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGAAAACATCAAAAAT+TGG - chr2.2:61712012-61712031 MS.gene003013:CDS 15.0%
!! AAGTATTCGGAAATTATAAT+TGG + chr2.2:61711180-61711199 None:intergenic 20.0%
!! ACAACATTCTTATTAAATGT+TGG + chr2.2:61712209-61712228 None:intergenic 20.0%
!! ATTTCTTTCAACATCATTTA+TGG + chr2.2:61712050-61712069 None:intergenic 20.0%
!! TAGAAAACATAATAACCAAA+TGG - chr2.2:61711692-61711711 MS.gene003013:intron 20.0%
!! TTTAATAAGAATGTTGTTGT+TGG - chr2.2:61712212-61712231 MS.gene003013:CDS 20.0%
!!! ATCATCAAATTTTAGAAACT+TGG - chr2.2:61712454-61712473 MS.gene003013:CDS 20.0%
!!! GAGTATTGGAAAATTATATT+TGG + chr2.2:61711408-61711427 None:intergenic 20.0%
!!! TCATCAAATTTTAGAAACTT+GGG - chr2.2:61712455-61712474 MS.gene003013:CDS 20.0%
!!! TGTTTTCTATAAGAAAAGAA+AGG + chr2.2:61711681-61711700 None:intergenic 20.0%
! AAAAATCCTTTATCCGAAAA+TGG - chr2.2:61712388-61712407 MS.gene003013:CDS 25.0%
! AAATCAATAAATGATGTTGC+AGG - chr2.2:61712066-61712085 MS.gene003013:CDS 25.0%
! AACACATCTTATCTTAATCA+TGG - chr2.2:61711973-61711992 MS.gene003013:CDS 25.0%
! ACTTATATTGTGACATATGA+AGG - chr2.2:61712164-61712183 MS.gene003013:CDS 25.0%
! ATCTGTAACATAACCATATT+AGG + chr2.2:61712323-61712342 None:intergenic 25.0%
! ATGGACAAAAAGCTATTAAA+GGG - chr2.2:61711775-61711794 MS.gene003013:CDS 25.0%
! ATTCGGAAATTATAATTGGT+GGG + chr2.2:61711176-61711195 None:intergenic 25.0%
! TACAATTATATGCACTAACA+AGG + chr2.2:61711944-61711963 None:intergenic 25.0%
! TATGGACAAAAAGCTATTAA+AGG - chr2.2:61711774-61711793 MS.gene003013:CDS 25.0%
! TATTCGGAAATTATAATTGG+TGG + chr2.2:61711177-61711196 None:intergenic 25.0%
! TCTACAAACATCACAAATTT+AGG - chr2.2:61712293-61712312 MS.gene003013:CDS 25.0%
! TTGGTCAGAAGATTATTTAA+TGG - chr2.2:61712628-61712647 MS.gene003013:CDS 25.0%
! TTGTTACATAAAACAAACAC+TGG - chr2.2:61711879-61711898 MS.gene003013:CDS 25.0%
!! ATATTTGGTGAGATATTGAT+TGG + chr2.2:61711393-61711412 None:intergenic 25.0%
!! TTTTGAATATGTGTAAACCT+TGG + chr2.2:61711810-61711829 None:intergenic 25.0%
AATTTGATGAACCACAAAGT+AGG - chr2.2:61712501-61712520 MS.gene003013:CDS 30.0%
ATAATTGGTGGGATATTGAT+TGG + chr2.2:61711165-61711184 None:intergenic 30.0%
GGATTTATAAAAATGGTGGT+AGG + chr2.2:61710669-61710688 None:intergenic 30.0%
GTAAGATTATCAGAGCAAAA+TGG + chr2.2:61710750-61710769 None:intergenic 30.0%
TATAACACATCAATGCCATT+TGG + chr2.2:61711710-61711729 None:intergenic 30.0%
TATAATTTCCGAATACTTGC+TGG - chr2.2:61711182-61711201 MS.gene003013:intron 30.0%
TATGCACATTCAAAATGAGT+GGG + chr2.2:61711281-61711300 None:intergenic 30.0%
TATGTTACAGATTGATCATC+CGG - chr2.2:61712331-61712350 MS.gene003013:CDS 30.0%
TCTAGATCTATGAAGTCATT+TGG + chr2.2:61710816-61710835 None:intergenic 30.0%
! AAATTTAGGTTCGCCTAATA+TGG - chr2.2:61712307-61712326 MS.gene003013:CDS 30.0%
! ATAGTTCCATTTTCGGATAA+AGG + chr2.2:61712397-61712416 None:intergenic 30.0%
! ATGAAGTCATTTGGTTTAAG+TGG + chr2.2:61710807-61710826 None:intergenic 30.0%
! CTCTCTAATAGTTCCATTTT+CGG + chr2.2:61712404-61712423 None:intergenic 30.0%
! TATAATTTTCCAATACTCGC+TGG - chr2.2:61711410-61711429 MS.gene003013:intron 30.0%
! TGAAGTCATTTGGTTTAAGT+GGG + chr2.2:61710806-61710825 None:intergenic 30.0%
AAAATGGTGTGACACTTTGA+GGG + chr2.2:61710734-61710753 None:intergenic 35.0%
ATATGTGTAAACCTTGGATG+TGG + chr2.2:61711804-61711823 None:intergenic 35.0%
ATGAACACTAGTGTTTGTCA+TGG + chr2.2:61711138-61711157 None:intergenic 35.0%
ATGAGTCCAGTTTCAGAATA+AGG + chr2.2:61712560-61712579 None:intergenic 35.0%
ATTGATGTGTTATATGAGGG+AGG - chr2.2:61711716-61711735 MS.gene003013:intron 35.0%
GAATGTGATGTTATTGGTAG+TGG + chr2.2:61710712-61710731 None:intergenic 35.0%
GCTATTACAAATGTAGCACT+TGG - chr2.2:61712090-61712109 MS.gene003013:CDS 35.0%
GTATGCACATTCAAAATGAG+TGG + chr2.2:61711282-61711301 None:intergenic 35.0%
TGAGTCCAGTTTCAGAATAA+GGG + chr2.2:61712559-61712578 None:intergenic 35.0%
TGATACCAAACATAACAGCT+TGG - chr2.2:61712609-61712628 MS.gene003013:CDS 35.0%
TTGAGGGAATGTGATGTTAT+TGG + chr2.2:61710718-61710737 None:intergenic 35.0%
! AAGAGACTGGACTATTTTCT+TGG + chr2.2:61710779-61710798 None:intergenic 35.0%
! ATGAACACTGGTGTTAATGT+TGG + chr2.2:61710988-61711007 None:intergenic 35.0%
! CGGTGGATTTATAAAAATGG+TGG + chr2.2:61710673-61710692 None:intergenic 35.0%
! GAAGTCATTTGGTTTAAGTG+GGG + chr2.2:61710805-61710824 None:intergenic 35.0%
! TGGCGGTGGATTTATAAAAA+TGG + chr2.2:61710676-61710695 None:intergenic 35.0%
! TTTTCAACCTTTCTTCTTGC+TGG + chr2.2:61712125-61712144 None:intergenic 35.0%
!! ATGAACACTAGTCTTTGTCA+TGG + chr2.2:61711366-61711385 None:intergenic 35.0%
!! ATTGAATTTTGGCATGCTAG+TGG + chr2.2:61710880-61710899 None:intergenic 35.0%
!! GGCATTGATGTGTTATATGA+GGG - chr2.2:61711713-61711732 MS.gene003013:intron 35.0%
!! TATTCTGAAACTGGACTCAT+TGG - chr2.2:61712560-61712579 MS.gene003013:CDS 35.0%
!! TGGCATTGATGTGTTATATG+AGG - chr2.2:61711712-61711731 MS.gene003013:intron 35.0%
!!! AATCACCTTTTAAAACCCGA+CGG + chr2.2:61711907-61711926 None:intergenic 35.0%
AGTGTGGATAACATGAACAC+TGG + chr2.2:61711000-61711019 None:intergenic 40.0%
ATCAATGCATGCAACAGGTT+TGG + chr2.2:61711252-61711271 None:intergenic 40.0%
ATGAGCTTTCAAAAGACTCG+TGG - chr2.2:61711739-61711758 MS.gene003013:CDS 40.0%
CAAAATGGTGTGACACTTTG+AGG + chr2.2:61710735-61710754 None:intergenic 40.0%
CACTATGCAGATCGAGAAAA+AGG - chr2.2:61711546-61711565 MS.gene003013:CDS 40.0%
CCACAAAGTAGGAATGTTAC+AGG - chr2.2:61712512-61712531 MS.gene003013:CDS 40.0%
CCTGTAACATTCCTACTTTG+TGG + chr2.2:61712515-61712534 None:intergenic 40.0%
GTATGCACGTTCAAAATGAG+CGG + chr2.2:61711510-61711529 None:intergenic 40.0%
GTGATATCAATGCATGCAAC+AGG + chr2.2:61711257-61711276 None:intergenic 40.0%
GTTGTTGTCCAGCAAGTATT+CGG + chr2.2:61711193-61711212 None:intergenic 40.0%
TCAATGCATGCAACAGGTTT+GGG + chr2.2:61711251-61711270 None:intergenic 40.0%
TCTGACCAAGCTGTTATGTT+TGG + chr2.2:61712617-61712636 None:intergenic 40.0%
TGAGCTTTCAAAAGACTCGT+GGG - chr2.2:61711740-61711759 MS.gene003013:CDS 40.0%
TGATTGTCCAGCAAGAAGAA+AGG - chr2.2:61712115-61712134 MS.gene003013:CDS 40.0%
TGCTCGTAGCAGATATGATT+GGG + chr2.2:61711340-61711359 None:intergenic 40.0%
TTACCTGTTGTCGAAGAAGT+TGG - chr2.2:61712428-61712447 MS.gene003013:CDS 40.0%
! AGGAATGTTACAGGTGTTGT+CGG - chr2.2:61712521-61712540 MS.gene003013:CDS 40.0%
! ATAATGGGGGTAATGGTAGA+GGG + chr2.2:61711047-61711066 None:intergenic 40.0%
!! AACCTCCCTTATTCTGAAAC+TGG - chr2.2:61712551-61712570 MS.gene003013:CDS 40.0%
!! GGTGTTAATGTTGGTGATGT+GGG + chr2.2:61710979-61710998 None:intergenic 40.0%
!! TGGTGTTAATGTTGGTGATG+TGG + chr2.2:61710980-61710999 None:intergenic 40.0%
!! TTAATGTTGGTGATGTGGGT+GGG + chr2.2:61710975-61710994 None:intergenic 40.0%
!! TTGGTAGTGGTTTCGATTTG+AGG + chr2.2:61710699-61710718 None:intergenic 40.0%
!!! GTGGTGGTGGTATTGAATTT+TGG + chr2.2:61710891-61710910 None:intergenic 40.0%
AAAACAAACACTGGCACCGT+CGG - chr2.2:61711888-61711907 MS.gene003013:CDS 45.0%
AACAGATGTGATAGGGGTAG+TGG + chr2.2:61711105-61711124 None:intergenic 45.0%
AGCAGATATGATTGGGGTAG+TGG + chr2.2:61711333-61711352 None:intergenic 45.0%
ATATAGCACCACCATTGAGG+CGG + chr2.2:61712661-61712680 None:intergenic 45.0%
GATCCAACTTCTTCGACAAC+AGG + chr2.2:61712434-61712453 None:intergenic 45.0%
GATCTGCATAGTGCAACTGA+TGG + chr2.2:61711539-61711558 None:intergenic 45.0%
GCTCGTAGCAGATATGATTG+GGG + chr2.2:61711339-61711358 None:intergenic 45.0%
GGAATATAGCACCACCATTG+AGG + chr2.2:61712664-61712683 None:intergenic 45.0%
GGTGATTATAGTGGTTGTGG+TGG + chr2.2:61711075-61711094 None:intergenic 45.0%
GGTGGTAGGAGTAGTAAAAG+TGG + chr2.2:61710655-61710674 None:intergenic 45.0%
GTCCAGTTTCAGAATAAGGG+AGG + chr2.2:61712556-61712575 None:intergenic 45.0%
GTGCTCGTAGCAGATATGAT+TGG + chr2.2:61711341-61711360 None:intergenic 45.0%
GTTGTGGTGGCAGTGATAAT+GGG + chr2.2:61711062-61711081 None:intergenic 45.0%
TGATTGATCAGCGAGAACCT+GGG + chr2.2:61712369-61712388 None:intergenic 45.0%
TGCATAGTGCAACTGATGGA+TGG + chr2.2:61711535-61711554 None:intergenic 45.0%
TGCTCGCAACAGATGTGATA+GGG + chr2.2:61711112-61711131 None:intergenic 45.0%
TGTTGTTGTCCAGCGAGTAT+TGG + chr2.2:61711422-61711441 None:intergenic 45.0%
TTAAAGGGTCTCCACATCCA+AGG - chr2.2:61711790-61711809 MS.gene003013:CDS 45.0%
TTACACTCTGCAGAAGAAGC+TGG - chr2.2:61712266-61712285 MS.gene003013:CDS 45.0%
TTGATTGATCAGCGAGAACC+TGG + chr2.2:61712370-61712389 None:intergenic 45.0%
! AGATATGATTGGGGTAGTGG+TGG + chr2.2:61711330-61711349 None:intergenic 45.0%
! GAATGTTACAGGTGTTGTCG+GGG - chr2.2:61712523-61712542 MS.gene003013:CDS 45.0%
! GGAATGTTACAGGTGTTGTC+GGG - chr2.2:61712522-61712541 MS.gene003013:CDS 45.0%
! GTAGTGGTTTCGATTTGAGG+TGG + chr2.2:61710696-61710715 None:intergenic 45.0%
! TTGTGGTGGCAGTGATAATG+GGG + chr2.2:61711061-61711080 None:intergenic 45.0%
!! GATAATGGGGGTAATGGTAG+AGG + chr2.2:61711048-61711067 None:intergenic 45.0%
!! GTTAATGTTGGTGATGTGGG+TGG + chr2.2:61710976-61710995 None:intergenic 45.0%
!! TAATGTTGGTGATGTGGGTG+GGG + chr2.2:61710974-61710993 None:intergenic 45.0%
AAACAAACACTGGCACCGTC+GGG - chr2.2:61711889-61711908 MS.gene003013:CDS 50.0%
ATGGACTTCAACCGCCTCAA+TGG - chr2.2:61712647-61712666 MS.gene003013:CDS 50.0%
CAAGGGGGATGAGATAGTGT+TGG + chr2.2:61710940-61710959 None:intergenic 50.0%
CGGGGTGATTATAGTGGTTG+TGG + chr2.2:61711078-61711097 None:intergenic 50.0%
GCAGAGTGTAATCCAGTCTC+TGG + chr2.2:61712257-61712276 None:intergenic 50.0%
GCTCGCAACAGATGTGATAG+GGG + chr2.2:61711111-61711130 None:intergenic 50.0%
GGTTGTGGTGGCAGTGATAA+TGG + chr2.2:61711063-61711082 None:intergenic 50.0%
GTAATGGTAGAGGGAGTGGT+GGG + chr2.2:61711038-61711057 None:intergenic 50.0%
GTGCTCGCAACAGATGTGAT+AGG + chr2.2:61711113-61711132 None:intergenic 50.0%
TTAAGTGGGGCGAAAGAGAC+TGG + chr2.2:61710792-61710811 None:intergenic 50.0%
TTGGCATGCTAGTGGTAGCT+GGG + chr2.2:61710872-61710891 None:intergenic 50.0%
TTTCAAAAGACTCGTGGGCG+TGG - chr2.2:61711745-61711764 MS.gene003013:CDS 50.0%
TTTGGCATGCTAGTGGTAGC+TGG + chr2.2:61710873-61710892 None:intergenic 50.0%
! AGATGTGATAGGGGTAGTGG+TGG + chr2.2:61711102-61711121 None:intergenic 50.0%
! ATGATTGGGGTAGTGGTGGT+CGG + chr2.2:61711326-61711345 None:intergenic 50.0%
! GTGGTTTCGATTTGAGGTGG+CGG + chr2.2:61710693-61710712 None:intergenic 50.0%
!! GGCAGTGATAATGGGGGTAA+TGG + chr2.2:61711054-61711073 None:intergenic 50.0%
!! TGAGATAGTGTTGGTGGTGC+TGG + chr2.2:61710931-61710950 None:intergenic 50.0%
!! TGTGGTGGCAGTGATAATGG+GGG + chr2.2:61711060-61711079 None:intergenic 50.0%
!!! TGGCACCGTCGGGTTTTAAA+AGG - chr2.2:61711899-61711918 MS.gene003013:CDS 50.0%
ATGCTAGTGGTAGCTGGGGT+GGG + chr2.2:61710867-61710886 None:intergenic 55.0%
GACTTCAACCGCCTCAATGG+TGG - chr2.2:61712650-61712669 MS.gene003013:CDS 55.0%
GGTGGTCGGGGTGATTATAG+TGG + chr2.2:61711084-61711103 None:intergenic 55.0%
TCGGGGTGATAGCTGATGGA+TGG + chr2.2:61711307-61711326 None:intergenic 55.0%
TCGTGGGCGTGGAGGAAATA+TGG - chr2.2:61711756-61711775 MS.gene003013:CDS 55.0%
TGGCATGCTAGTGGTAGCTG+GGG + chr2.2:61710871-61710890 None:intergenic 55.0%
! AGTCTCTGGTGACTTGCGCT+GGG + chr2.2:61712243-61712262 None:intergenic 55.0%
! AGTGGTGGGAGTAGTGATGG+TGG + chr2.2:61711024-61711043 None:intergenic 55.0%
! GGGGGATGAGATAGTGTTGG+TGG + chr2.2:61710937-61710956 None:intergenic 55.0%
! GGTAATGGTAGAGGGAGTGG+TGG + chr2.2:61711039-61711058 None:intergenic 55.0%
! GTGATAGGGGTAGTGGTGGT+CGG + chr2.2:61711098-61711117 None:intergenic 55.0%
! GTGGTGGGAGTAGTGATGGT+GGG + chr2.2:61711023-61711042 None:intergenic 55.0%
! GTTTCGATTTGAGGTGGCGG+TGG + chr2.2:61710690-61710709 None:intergenic 55.0%
! TGATAGGGGTAGTGGTGGTC+GGG + chr2.2:61711097-61711116 None:intergenic 55.0%
! TGATTGGGGTAGTGGTGGTC+GGG + chr2.2:61711325-61711344 None:intergenic 55.0%
!! GAGTAGTGATGGTGGGAGTG+TGG + chr2.2:61711016-61711035 None:intergenic 55.0%
!! GATAGTGTTGGTGGTGCTGG+TGG + chr2.2:61710928-61710947 None:intergenic 55.0%
CAAAAGACTCGTGGGCGTGG+AGG - chr2.2:61711748-61711767 MS.gene003013:CDS 60.0%
CAGCGCAAGTCACCAGAGAC+TGG - chr2.2:61712242-61712261 MS.gene003013:CDS 60.0%
CATGCTAGTGGTAGCTGGGG+TGG + chr2.2:61710868-61710887 None:intergenic 60.0%
GTGGTCGGGGTGATAGCTGA+TGG + chr2.2:61711311-61711330 None:intergenic 60.0%
TGCTAGTGGTAGCTGGGGTG+GGG + chr2.2:61710866-61710885 None:intergenic 60.0%
! ACCTGGGCATTGCTGCTCTC+CGG + chr2.2:61712353-61712372 None:intergenic 60.0%
! CAGTCTCTGGTGACTTGCGC+TGG + chr2.2:61712244-61712263 None:intergenic 60.0%
! GATAGGGGTAGTGGTGGTCG+GGG + chr2.2:61711096-61711115 None:intergenic 60.0%
! GATTGGGGTAGTGGTGGTCG+GGG + chr2.2:61711324-61711343 None:intergenic 60.0%
! GGGAGTGGTGGGAGTAGTGA+TGG + chr2.2:61711027-61711046 None:intergenic 60.0%
! GGGGGTAATGGTAGAGGGAG+TGG + chr2.2:61711042-61711061 None:intergenic 60.0%
!! AGTGTTGGTGGTGCTGGTGG+TGG + chr2.2:61710925-61710944 None:intergenic 60.0%
!! GTGGGGATGGTGGTGGTCAA+GGG + chr2.2:61710957-61710976 None:intergenic 60.0%
!! GTTGGTGATGTGGGTGGGGA+TGG + chr2.2:61710970-61710989 None:intergenic 60.0%
!! TGGGGATGGTGGTGGTCAAG+GGG + chr2.2:61710956-61710975 None:intergenic 60.0%
!! TTGGTGGTGCTGGTGGTGGT+GGG + chr2.2:61710921-61710940 None:intergenic 60.0%
AGTGGTAGCTGGGGTGGGGA+TGG + chr2.2:61710862-61710881 None:intergenic 65.0%
GGTGATGTGGGTGGGGATGG+TGG + chr2.2:61710967-61710986 None:intergenic 65.0%
GGTGGGGGAAGATGTGGTGG+TGG + chr2.2:61710904-61710923 None:intergenic 65.0%
GTGGTAGCTGGGGTGGGGAT+GGG + chr2.2:61710861-61710880 None:intergenic 65.0%
TCCGGAGAGCAGCAATGCCC+AGG - chr2.2:61712349-61712368 MS.gene003013:CDS 65.0%
! CTCTGGTGACTTGCGCTGGG+AGG + chr2.2:61712240-61712259 None:intergenic 65.0%
! GATGTGGGTGGGGATGGTGG+TGG + chr2.2:61710964-61710983 None:intergenic 65.0%
!! GGGGATGGTGGTGGTCAAGG+GGG + chr2.2:61710955-61710974 None:intergenic 65.0%
!! GGTGGGGATGGTGGTGGTCA+AGG + chr2.2:61710958-61710977 None:intergenic 65.0%
!! GGTGGTGGGGGAAGATGTGG+TGG + chr2.2:61710907-61710926 None:intergenic 65.0%
!! GGTGGTGGTGGGGGAAGATG+TGG + chr2.2:61710910-61710929 None:intergenic 65.0%
!! GTTGGTGGTGCTGGTGGTGG+TGG + chr2.2:61710922-61710941 None:intergenic 65.0%
!! TGGTGGTGCTGGTGGTGGTG+GGG + chr2.2:61710920-61710939 None:intergenic 65.0%
!! GGTGGTGCTGGTGGTGGTGG+GGG + chr2.2:61710919-61710938 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 61710600 61712688 61710600 ID=MS.gene003013
chr2.2 mRNA 61710600 61712688 61710600 ID=MS.gene003013.t1;Parent=MS.gene003013
chr2.2 exon 61711721 61712688 61711721 ID=MS.gene003013.t1.exon1;Parent=MS.gene003013.t1
chr2.2 CDS 61711721 61712688 61711721 ID=cds.MS.gene003013.t1;Parent=MS.gene003013.t1
chr2.2 exon 61711477 61711593 61711477 ID=MS.gene003013.t1.exon2;Parent=MS.gene003013.t1
chr2.2 CDS 61711477 61711593 61711477 ID=cds.MS.gene003013.t1;Parent=MS.gene003013.t1
chr2.2 exon 61710600 61711200 61710600 ID=MS.gene003013.t1.exon3;Parent=MS.gene003013.t1
chr2.2 CDS 61710600 61711200 61710600 ID=cds.MS.gene003013.t1;Parent=MS.gene003013.t1
Gene Sequence

>MS.gene003013

ATGGATAATGATGATCGAGATCTCTTTTCTATTGTTCGTAGCTGCAACGCTACCACTTTTACTACTCCTACCACCATTTTTATAAATCCACCGCCACCTCAAATCGAAACCACTACCAATAACATCACATTCCCTCAAAGTGTCACACCATTTTGCTCTGATAATCTTACTTTTAACCAAGAAAATAGTCCAGTCTCTTTCGCCCCACTTAAACCAAATGACTTCATAGATCTAGATAAATTGATGATCAATTTCAATCCCATCCCCACCCCAGCTACCACTAGCATGCCAAAATTCAATACCACCACCACATCTTCCCCCACCACCACCAGCACCACCAACACTATCTCATCCCCCTTGACCACCACCATCCCCACCCACATCACCAACATTAACACCAGTGTTCATGTTATCCACACTCCCACCATCACTACTCCCACCACTCCCTCTACCATTACCCCCATTATCACTGCCACCACAACCACTATAATCACCCCGACCACCACTACCCCTATCACATCTGTTGCGAGCACTACCATGACAAACACTAGTGTTCATGAAACCAATCAATATCCCACCAATTATAATTTCCGAATACTTGCTGGACAACAACAGATTCAACAAAACATCAACAATCAAGTGTCTGTTCCCAAACCTGTTGCATGCATTGATATCACACCCACTCATTTTGAATGTGCATACAACCATCCATCAGCTATCACCCCGACCACCACTACCCCAATCATATCTGCTACGAGCACTGCCATGACAAAGACTAGTGTTCATGAAACCAATCAATATCTCACCAAATATAATTTTCCAATACTCGCTGGACAACAACAGATTCAACAAAACATCAACAATCAAGCGTCTGTTCCCAAACCTGTTGCATGCATTGATATCACAACCGCTCATTTTGAACGTGCATACAACCATCCATCAGTTGCACTATGCAGATCGAGAAAAAGGTAAAGTATTTATTTTATTATTTCATATATGTTAATTATAAATCAATTTTAGTGTCAAAATAATTGAAATATTTGACGTAACTTAATTCTAGTGAACTAAAATCATTTTACCTTTCTTTTCTTATAGAAAACATAATAACCAAATGGCATTGATGTGTTATATGAGGGAGGATGAGCTTTCAAAAGACTCGTGGGCGTGGAGGAAATATGGACAAAAAGCTATTAAAGGGTCTCCACATCCAAGGTTTACACATATTCAAAACTCTATCGTTAACATATTTCTCTTTTCTTTCACATAAAAAACAATAATTTTGTTACATAAAACAAACACTGGCACCGTCGGGTTTTAAAAGGTGATTGTAAGCATTAAGATCCTTGTTAGTGCATATAATTGTAATTAAATTCAACACATCTTATCTTAATCATGGTTGCGTTTGTGTTTCAATTTTGAAAACATCAAAAATTGGTGTATATTTAGTCCATAAATGATGTTGAAAGAAATCAATAAATGATGTTGCAGGAGCTATTACAAATGTAGCACTTGGTCTGATTGTCCAGCAAGAAGAAAGGTTGAAAAATGCAAAACTCAAGAGAACACTTATATTGTGACATATGAAGGAGAGCACAATCATGCAAAGCCAACATTTAATAAGAATGTTGTTGTTGGTACCTCCCAGCGCAAGTCACCAGAGACTGGATTACACTCTGCAGAAGAAGCTGGATCATCTACAAACATCACAAATTTAGGTTCGCCTAATATGGTTATGTTACAGATTGATCATCCGGAGAGCAGCAATGCCCAGGTTCTCGCTGATCAATCAAAAATCCTTTATCCGAAAATGGAACTATTAGAGAGTCAATTACCTGTTGTCGAAGAAGTTGGATCATCATCAAATTTTAGAAACTTGGGTTCACATAACAAAATGATTATGCAATTTGATGAACCACAAAGTAGGAATGTTACAGGTGTTGTCGGGGACTCAAACCTCCCTTATTCTGAAACTGGACTCATTGGAAGCTTTGATGATAATGATGACATTTTGATACCAAACATAACAGCTTGGTCAGAAGATTATTTAATGGACTTCAACCGCCTCAATGGTGGTGCTATATTCCCTTAG
Protein sequence

>MS.gene003013.t1

MDNDDRDLFSIVRSCNATTFTTPTTIFINPPPPQIETTTNNITFPQSVTPFCSDNLTFNQENSPVSFAPLKPNDFIDLDKLMINFNPIPTPATTSMPKFNTTTTSSPTTTSTTNTISSPLTTTIPTHITNINTSVHVIHTPTITTPTTPSTITPIITATTTTIITPTTTTPITSVASTTMTNTSVHETNQYPTNYNFRILAGQQQIQQNINNQVSVPKPVACIDITPTHFECAYNHPSAITPTTTTPIISATSTAMTKTSVHETNQYLTKYNFPILAGQQQIQQNINNQASVPKPVACIDITTAHFERAYNHPSVALCRSRKRKHNNQMALMCYMREDELSKDSWAWRKYGQKAIKGSPHPRSYYKCSTWSDCPARRKVEKCKTQENTYIVTYEGEHNHAKPTFNKNVVVGTSQRKSPETGLHSAEEAGSSTNITNLGSPNMVMLQIDHPESSNAQVLADQSKILYPKMELLESQLPVVEEVGSSSNFRNLGSHNKMIMQFDEPQSRNVTGVVGDSNLPYSETGLIGSFDDNDDILIPNITAWSEDYLMDFNRLNGGAIFP