AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003014

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003014.t1 MTR_2g024390 99.209 253 2 0 1 253 122 374 0.0 534
MS.gene003014.t1 MTR_5g085860 65.873 252 71 4 1 247 51 292 7.28e-102 298
MS.gene003014.t1 MTR_1g017080 60.000 245 88 3 1 237 124 366 2.73e-87 264
MS.gene003014.t1 MTR_5g033720 55.459 229 100 1 2 228 78 306 2.76e-81 246
MS.gene003014.t1 MTR_1g084060 50.833 240 98 5 2 228 25 257 1.34e-66 207
MS.gene003014.t1 MTR_1g084060 50.833 240 98 5 2 228 25 257 3.76e-66 208
MS.gene003014.t1 MTR_1g012960 29.688 256 147 5 1 226 178 430 1.72e-35 131
MS.gene003014.t1 MTR_3g106400 28.889 270 161 6 1 240 111 379 4.15e-34 127
MS.gene003014.t1 MTR_4g116545 31.405 242 139 6 1 216 75 315 5.05e-34 125
MS.gene003014.t1 MTR_2g461240 30.453 243 140 6 1 216 99 339 5.72e-34 126
MS.gene003014.t1 MTR_4g116545 31.405 242 139 6 1 216 75 315 5.94e-34 125
MS.gene003014.t1 MTR_3g106400 29.675 246 142 4 1 216 111 355 6.02e-34 126
MS.gene003014.t1 MTR_3g106400 29.675 246 142 4 1 216 111 355 6.07e-34 126
MS.gene003014.t1 MTR_5g011070 28.000 250 139 4 2 216 33 276 4.26e-29 112
MS.gene003014.t1 MTR_4g019450 42.667 75 43 0 144 218 347 421 2.33e-12 66.6
MS.gene003014.t1 MTR_7g065050 48.333 60 31 0 159 218 307 366 4.08e-12 65.9
MS.gene003014.t1 MTR_3g112300 39.535 86 46 2 133 218 327 406 7.84e-12 65.1
MS.gene003014.t1 MTR_3g112300 39.535 86 46 2 133 218 327 406 8.83e-12 65.1
MS.gene003014.t1 MTR_3g112290 42.254 71 41 0 148 218 339 409 9.54e-12 64.7
MS.gene003014.t1 MTR_1g023050 42.254 71 38 1 148 218 350 417 1.72e-11 64.3
MS.gene003014.t1 MTR_8g078480 40.230 87 47 3 139 222 558 642 2.56e-11 63.5
MS.gene003014.t1 MTR_4g051532 46.667 60 32 0 159 218 404 463 3.15e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003014.t1 AT1G62360 78.295 258 50 4 1 253 126 382 8.37e-130 372
MS.gene003014.t1 AT4G08150 58.964 251 85 5 1 237 139 385 1.13e-87 266
MS.gene003014.t1 AT1G23380 50.000 246 103 3 2 237 91 326 1.88e-78 240
MS.gene003014.t1 AT1G70510 49.576 236 119 0 2 237 75 310 5.17e-78 238
MS.gene003014.t1 AT1G23380 49.597 248 103 4 2 237 91 328 2.08e-76 234
MS.gene003014.t1 AT1G70510 48.750 240 119 1 2 237 75 314 1.13e-75 232
MS.gene003014.t1 AT5G25220 31.950 241 138 5 1 216 164 403 4.74e-38 138
MS.gene003014.t1 AT5G25220 31.950 241 138 5 1 216 164 403 6.73e-38 137
MS.gene003014.t1 AT4G32040 31.250 240 141 3 1 216 123 362 4.81e-37 134
MS.gene003014.t1 AT4G32040 31.250 240 141 3 1 216 123 362 6.25e-37 134
MS.gene003014.t1 AT5G11060 30.705 241 141 6 1 216 128 367 3.83e-34 127
MS.gene003014.t1 AT1G62990 30.864 243 138 6 2 216 35 275 5.49e-31 116
MS.gene003014.t1 AT1G75430 49.091 55 28 0 164 218 209 263 4.35e-12 65.1
MS.gene003014.t1 AT5G02030 46.667 60 32 0 159 218 350 409 1.28e-11 64.7
MS.gene003014.t1 AT1G19700 46.667 60 32 0 159 218 353 412 1.41e-11 64.3
MS.gene003014.t1 AT1G19700 46.667 60 32 0 159 218 353 412 1.41e-11 64.3
MS.gene003014.t1 AT1G19700 46.667 60 32 0 159 218 353 412 1.41e-11 64.3
MS.gene003014.t1 AT1G19700 46.667 60 32 0 159 218 353 412 1.41e-11 64.3
MS.gene003014.t1 AT1G19700 46.667 60 32 0 159 218 353 412 1.41e-11 64.3
MS.gene003014.t1 AT1G75410 45.000 60 33 0 159 218 348 407 6.69e-11 62.4
MS.gene003014.t1 AT1G75410 45.000 60 33 0 159 218 348 407 6.69e-11 62.4
MS.gene003014.t1 AT4G36870 39.024 82 46 2 139 218 480 559 6.82e-11 62.4
MS.gene003014.t1 AT4G36870 39.024 82 46 2 139 218 480 559 6.82e-11 62.4
MS.gene003014.t1 AT2G27220 45.000 60 33 0 159 218 230 289 8.44e-11 62.0
MS.gene003014.t1 AT2G27220 45.000 60 33 0 159 218 230 289 8.44e-11 62.0
MS.gene003014.t1 AT2G35940 46.667 60 32 0 159 218 387 446 8.55e-11 62.0
MS.gene003014.t1 AT2G35940 46.667 60 32 0 159 218 387 446 8.55e-11 62.0
MS.gene003014.t1 AT2G35940 46.667 60 32 0 159 218 387 446 8.55e-11 62.0
MS.gene003014.t1 AT2G23760 40.278 72 41 1 147 218 416 485 8.64e-11 62.0
MS.gene003014.t1 AT2G23760 40.278 72 41 1 147 218 416 485 8.64e-11 62.0
MS.gene003014.t1 AT2G23760 40.278 72 41 1 147 218 416 485 8.64e-11 62.0
MS.gene003014.t1 AT5G41410 46.667 60 32 0 159 218 393 452 9.14e-11 62.0
MS.gene003014.t1 AT2G27220 45.000 60 33 0 159 218 248 307 9.67e-11 61.6

Find 55 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAACTTTCCAAACCCTTAA+AGG 0.230018 2.2:+61698073 MS.gene003014:CDS
AGCAGAAGACAGGGAATTAA+AGG 0.275275 2.2:+61701654 MS.gene003014:CDS
CATAGCTTCCTTTAAGGGTT+TGG 0.275443 2.2:-61698081 None:intergenic
AATTGTTGCCTTGCCTCTTT+TGG 0.282916 2.2:-61701757 None:intergenic
AAAAGCATAGCTTCCTTTAA+GGG 0.321776 2.2:-61698086 None:intergenic
TCTTCTTCTTCAGATAATAT+TGG 0.323037 2.2:+61698149 MS.gene003014:CDS
GCAGTTGGATCAGGTTGTTT+AGG 0.376419 2.2:+61697987 MS.gene003014:CDS
ATCAGAAGCAAATAAACAAC+TGG 0.411205 2.2:+61702653 MS.gene003014:CDS
CAAGGCAACAATTGCTTGAA+TGG 0.428670 2.2:+61701767 MS.gene003014:CDS
AACCTTGCCACCACTTCACT+TGG 0.434594 2.2:-61697924 None:intergenic
TCCAGCTCTAGATCAGTTCA+TGG 0.439689 2.2:+61698016 MS.gene003014:CDS
AATTCCCTGTCTTCTGCTTG+AGG 0.446914 2.2:-61701649 None:intergenic
AGCAAGAGTTTATGAAGAAA+AGG 0.455849 2.2:+61701719 MS.gene003014:CDS
AGAAAATACAGTGGATACTT+AGG 0.456169 2.2:+61701688 MS.gene003014:CDS
TCCTCACTATCACCGTCTCT+TGG 0.481181 2.2:+61697595 MS.gene003014:CDS
TTCAGAGGACATGCAGTTTG+TGG 0.481599 2.2:+61702708 MS.gene003014:CDS
TAGATCCTCAAGCAGAAGAC+AGG 0.488640 2.2:+61701644 MS.gene003014:CDS
CTTGTAGTGAAGGTGGAGAT+AGG 0.494451 2.2:+61701575 MS.gene003014:CDS
TCAATCAAAGGAAACGGCAC+TGG 0.497928 2.2:+61702680 MS.gene003014:CDS
CTGGCTCTAGCAGAGTCAAC+AGG 0.498247 2.2:+61702625 MS.gene003014:CDS
ATGTGCAACTGCAGTGAGAA+TGG 0.501403 2.2:+61697956 MS.gene003014:CDS
GGTGGAGATGCAGTTGGATC+AGG 0.509504 2.2:+61697978 MS.gene003014:CDS
GGACATGCAGTTTGTGGTGA+TGG 0.522795 2.2:+61702714 MS.gene003014:CDS
GCAGAAGACAGGGAATTAAA+GGG 0.524288 2.2:+61701655 MS.gene003014:CDS
AGCCTACATCAACTGTCAAA+AGG 0.527463 2.2:+61697619 MS.gene003014:CDS
AAAAGGAAAGCTTCCAAAAG+AGG 0.530019 2.2:+61701744 MS.gene003014:CDS
GGTTTATCAATCAAAGGAAA+CGG 0.544135 2.2:+61702674 MS.gene003014:CDS
AGTGAAGGTGGAGATAGGAA+TGG 0.544711 2.2:+61701580 MS.gene003014:CDS
ATAACAGGAATCACAGAAGC+TGG 0.544820 2.2:+61702606 MS.gene003014:intron
TCCATGAACTGATCTAGAGC+TGG 0.552608 2.2:-61698017 None:intergenic
ATGTAATAGTGTGGATGACT+TGG 0.557999 2.2:-61702739 None:intergenic
ACAACTGGTTTATCAATCAA+AGG 0.560044 2.2:+61702668 MS.gene003014:CDS
CACCAAGTGAAGTGGTGGCA+AGG 0.566973 2.2:+61697922 MS.gene003014:CDS
ATATGATCAGCTTGTAGTGA+AGG 0.580233 2.2:+61701565 MS.gene003014:intron
AAGTCATCCACACTATTACA+TGG 0.581325 2.2:+61702741 MS.gene003014:CDS
CATGGTGTTAGATAGATCCA+TGG 0.582210 2.2:-61702788 None:intergenic
TGTGCAACTGCAGTGAGAAT+GGG 0.589860 2.2:+61697957 MS.gene003014:CDS
GGTTGGAGCACCAAGTGAAG+TGG 0.591898 2.2:+61697914 MS.gene003014:intron
TCTCAGCAATTCATATCCCA+TGG 0.592615 2.2:+61702771 MS.gene003014:CDS
ACAAACTGCATGTCCTCTGA+AGG 0.595663 2.2:-61702706 None:intergenic
TGATCAGCTTGTAGTGAAGG+TGG 0.598391 2.2:+61701568 MS.gene003014:intron
GGCAACAATTGCTTGAATGG+TGG 0.608396 2.2:+61701770 MS.gene003014:CDS
TCCAAGAGACGGTGATAGTG+AGG 0.612274 2.2:-61697596 None:intergenic
TGGAGCACCAAGTGAAGTGG+TGG 0.614555 2.2:+61697917 MS.gene003014:CDS
GAAAGCTTCCAAAAGAGGCA+AGG 0.624760 2.2:+61701749 MS.gene003014:CDS
TGATGTAGGCTTCCAAGAGA+CGG 0.625494 2.2:-61697607 None:intergenic
ACATTATCCATGTAATAGTG+TGG 0.627160 2.2:-61702748 None:intergenic
ACGGCACTGGAAGCCTTCAG+AGG 0.633606 2.2:+61702693 MS.gene003014:CDS
GTGGTGCTTACAGATGGGTA+AGG 0.637343 2.2:-61701811 None:intergenic
ATGGTGTTAGATAGATCCAT+GGG 0.639715 2.2:-61702787 None:intergenic
AGATCCTCAAGCAGAAGACA+GGG 0.640900 2.2:+61701645 MS.gene003014:CDS
CCGAGGTAATAACTAGAGCA+TGG 0.644204 2.2:-61702806 None:intergenic
AGAATGGGTGGAGATGCAGT+TGG 0.655702 2.2:+61697972 MS.gene003014:CDS
GCAACTGCAGTGAGAATGGG+TGG 0.659150 2.2:+61697960 MS.gene003014:CDS
GGTGGAGCAGACATTACAAG+TGG 0.680780 2.2:+61701788 MS.gene003014:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATAAAAAAA+AGG - chr2.2:61701145-61701164 None:intergenic 0.0%
!! ATTCTAATAATTAATAACAA+TGG + chr2.2:61700259-61700278 MS.gene003014:intron 10.0%
!! TTTGAATATATGAAAATAAA+AGG - chr2.2:61701491-61701510 None:intergenic 10.0%
!!! ACTTCAATTTAATTTAATTA+AGG - chr2.2:61698500-61698519 None:intergenic 10.0%
!! AAATAATAACCAATGAATTA+GGG + chr2.2:61699041-61699060 MS.gene003014:intron 15.0%
!! GTGAATGTTTAATTAAATAA+AGG - chr2.2:61700660-61700679 None:intergenic 15.0%
!! TAAATAATAACCAATGAATT+AGG + chr2.2:61699040-61699059 MS.gene003014:intron 15.0%
!! TAAATATAGAAATCTAACAT+TGG - chr2.2:61701175-61701194 None:intergenic 15.0%
!! TACTATAATTTATGAATAAC+AGG + chr2.2:61702591-61702610 MS.gene003014:intron 15.0%
!! TTGTCAATATTAGTAATAAA+TGG - chr2.2:61697783-61697802 None:intergenic 15.0%
!!! AAGTTTTTTTATGTTTTGAA+GGG - chr2.2:61699987-61700006 None:intergenic 15.0%
!!! TTCATAAATTTTTTACTTCA+TGG + chr2.2:61697880-61697899 MS.gene003014:intron 15.0%
!! AAACATGTATAATTGATAAG+TGG - chr2.2:61700016-61700035 None:intergenic 20.0%
!! AAACATTGAATTGAAAACTT+TGG - chr2.2:61699866-61699885 None:intergenic 20.0%
!! AATAAAATATTCCATCCATA+GGG - chr2.2:61699399-61699418 None:intergenic 20.0%
!! AATACATGTTTATATGGTTA+GGG - chr2.2:61702475-61702494 None:intergenic 20.0%
!! AGGTTAAAATATTAACAATG+TGG - chr2.2:61701125-61701144 None:intergenic 20.0%
!! ATGATATACTACAAAAATAG+AGG - chr2.2:61699911-61699930 None:intergenic 20.0%
!! ATTACTTCAAACATAATCAA+AGG - chr2.2:61700285-61700304 None:intergenic 20.0%
!! ATTTATTAAAATCCGTAACT+AGG - chr2.2:61701921-61701940 None:intergenic 20.0%
!! CAAAATACTTAACTTATGAA+GGG - chr2.2:61700412-61700431 None:intergenic 20.0%
!! CTAAGATAATCTTTCTATAT+AGG - chr2.2:61700077-61700096 None:intergenic 20.0%
!! CTATATAGAAAGATTATCTT+AGG + chr2.2:61700075-61700094 MS.gene003014:intron 20.0%
!! GCAAATAATATAACATTAGA+AGG - chr2.2:61701518-61701537 None:intergenic 20.0%
!! GTAGTACATATATATTTCAT+TGG + chr2.2:61698724-61698743 MS.gene003014:intron 20.0%
!! TAATAAAATATTCCATCCAT+AGG - chr2.2:61699400-61699419 None:intergenic 20.0%
!! TACATAAAAGTAAACCAATA+AGG - chr2.2:61700816-61700835 None:intergenic 20.0%
!! TATTATCATAGGGATAAAAA+TGG - chr2.2:61700321-61700340 None:intergenic 20.0%
!! TCCTATAATCAAATATATGT+GGG - chr2.2:61700929-61700948 None:intergenic 20.0%
!! TCTATATCAAATGTGTAAAT+TGG + chr2.2:61702234-61702253 MS.gene003014:intron 20.0%
!! TGATATACTACAAAAATAGA+GGG - chr2.2:61699910-61699929 None:intergenic 20.0%
!! TTGTACAATACATGTTTATA+TGG - chr2.2:61702481-61702500 None:intergenic 20.0%
!! TTTATCATCTATGCTTAAAA+GGG - chr2.2:61697835-61697854 None:intergenic 20.0%
!! TTTATGAAGAAAAGGAAAAA+AGG + chr2.2:61701727-61701746 MS.gene003014:CDS 20.0%
!! TTTGCAAATTTGAAAAATCA+TGG - chr2.2:61702086-61702105 None:intergenic 20.0%
!! TTTGTAATGAATCCAAAATT+TGG + chr2.2:61698974-61698993 MS.gene003014:intron 20.0%
!!! AAAATCTGAATAGTATTTTC+TGG - chr2.2:61698215-61698234 None:intergenic 20.0%
!!! AAGACATTGTTTCTTTTTTT+GGG - chr2.2:61698408-61698427 None:intergenic 20.0%
!!! AAGGATTCAAATTTTTAAAG+TGG - chr2.2:61701833-61701852 None:intergenic 20.0%
!!! AATTAAAAATAGGAGTACAA+GGG + chr2.2:61700855-61700874 MS.gene003014:intron 20.0%
!!! ATTTGAAGACTGATTTTTTA+AGG + chr2.2:61702162-61702181 MS.gene003014:intron 20.0%
!!! ATTTTAATGTTCTGTTTATG+AGG + chr2.2:61701194-61701213 MS.gene003014:intron 20.0%
!!! CAAGTTTTTTTATGTTTTGA+AGG - chr2.2:61699988-61700007 None:intergenic 20.0%
!!! CTTGATAGTATTGTTTTTAT+GGG + chr2.2:61698820-61698839 MS.gene003014:intron 20.0%
!!! GATCGATTTTCTTTATAAAA+TGG - chr2.2:61700144-61700163 None:intergenic 20.0%
!!! GTACAATTTACTTTTTTTGA+AGG + chr2.2:61702495-61702514 MS.gene003014:intron 20.0%
!!! TACTTCATGGAAATTATTTT+AGG + chr2.2:61697893-61697912 MS.gene003014:intron 20.0%
!!! TGACTATAAATTGTTTTTAC+CGG + chr2.2:61701323-61701342 MS.gene003014:intron 20.0%
!!! TTACTACTATATACTTCTTT+TGG - chr2.2:61699827-61699846 None:intergenic 20.0%
!!! TTTGATTTCTTTCATTTCAT+AGG + chr2.2:61701889-61701908 MS.gene003014:intron 20.0%
! AAATGCATAGCTTAACTAAA+TGG - chr2.2:61700188-61700207 None:intergenic 25.0%
! AAATGTCATAACATAGAACT+TGG + chr2.2:61701393-61701412 MS.gene003014:intron 25.0%
! AAGCTAAGCTACTAAATTAT+TGG - chr2.2:61700709-61700728 None:intergenic 25.0%
! AATAATTTAGTAGCTTAGCT+TGG + chr2.2:61700708-61700727 MS.gene003014:intron 25.0%
! ACCATGGATATTTGTATATA+TGG - chr2.2:61701073-61701092 None:intergenic 25.0%
! AGTGGAAATCTATTATCATA+GGG - chr2.2:61700331-61700350 None:intergenic 25.0%
! ATATTTGATTATAGGACCTA+AGG + chr2.2:61700933-61700952 MS.gene003014:intron 25.0%
! ATGGATATTTGTATATATGG+GGG - chr2.2:61701070-61701089 None:intergenic 25.0%
! ATTACTTACACATGAATAGA+AGG - chr2.2:61701238-61701257 None:intergenic 25.0%
! CAAATGTGTAAATTGGATTT+GGG + chr2.2:61702241-61702260 MS.gene003014:intron 25.0%
! CAATACATGTTTATATGGTT+AGG - chr2.2:61702476-61702495 None:intergenic 25.0%
! CATATATATTTCATTGGTGT+TGG + chr2.2:61698730-61698749 MS.gene003014:intron 25.0%
! CATGGATATTTGTATATATG+GGG - chr2.2:61701071-61701090 None:intergenic 25.0%
! CCAAAATACTTAACTTATGA+AGG - chr2.2:61700413-61700432 None:intergenic 25.0%
! CCATGGATATTTGTATATAT+GGG - chr2.2:61701072-61701091 None:intergenic 25.0%
! CCTATAATCAAATATATGTG+GGG - chr2.2:61700928-61700947 None:intergenic 25.0%
! CTATAATCAAATATATGTGG+GGG - chr2.2:61700927-61700946 None:intergenic 25.0%
! CTTTATCATCTATGCTTAAA+AGG - chr2.2:61697836-61697855 None:intergenic 25.0%
! GAAGAGTTCCAATTAAAAAT+AGG + chr2.2:61700845-61700864 MS.gene003014:intron 25.0%
! GATATACTACAAAAATAGAG+GGG - chr2.2:61699909-61699928 None:intergenic 25.0%
! GTCCTATAATCAAATATATG+TGG - chr2.2:61700930-61700949 None:intergenic 25.0%
! TAAACTCACCATTATTCTTA+AGG - chr2.2:61699313-61699332 None:intergenic 25.0%
! TAACTAAATCCAAGTTTGTA+AGG + chr2.2:61700107-61700126 MS.gene003014:intron 25.0%
! TATAATCAAATATATGTGGG+GGG - chr2.2:61700926-61700945 None:intergenic 25.0%
! TCAAATACTAAATGCATGTT+CGG - chr2.2:61702148-61702167 None:intergenic 25.0%
! TCAAATGTGTAAATTGGATT+TGG + chr2.2:61702240-61702259 MS.gene003014:intron 25.0%
! TCACAAGTTTCTTTCTAAAT+TGG + chr2.2:61699110-61699129 MS.gene003014:intron 25.0%
! TCTTCTTCTTCAGATAATAT+TGG + chr2.2:61698149-61698168 MS.gene003014:CDS 25.0%
! TGCTTGTCTTTAACTAAAAA+TGG + chr2.2:61699570-61699589 MS.gene003014:intron 25.0%
! TTGAAGGAACTTAACTATAT+AGG + chr2.2:61698757-61698776 MS.gene003014:intron 25.0%
!! AAAAATCTTGCAAAGTTGAT+TGG + chr2.2:61699237-61699256 MS.gene003014:intron 25.0%
!! AAACTGTAAGATTTTTGAAC+TGG - chr2.2:61698130-61698149 None:intergenic 25.0%
!! AAGCTACTAAATTATTGGTT+AGG - chr2.2:61700704-61700723 None:intergenic 25.0%
!! ACTATGTTTGTTAACCTTAT+TGG + chr2.2:61700799-61700818 MS.gene003014:intron 25.0%
!! AGAAAGATTATCTTAGGTTT+TGG + chr2.2:61700081-61700100 MS.gene003014:intron 25.0%
!! AGTTGTTTGCATTAATTTGA+AGG + chr2.2:61702195-61702214 MS.gene003014:intron 25.0%
!! ATCAAAATGGTTAGGATTTT+TGG - chr2.2:61701096-61701115 None:intergenic 25.0%
!! ATTAAAAATAGGAGTACAAG+GGG + chr2.2:61700856-61700875 MS.gene003014:intron 25.0%
!! CAATTAAAAATAGGAGTACA+AGG + chr2.2:61700854-61700873 MS.gene003014:intron 25.0%
!! CCTTCATAAGTTAAGTATTT+TGG + chr2.2:61700410-61700429 MS.gene003014:intron 25.0%
!! GCATTTTTGTCTGAAAATAA+AGG + chr2.2:61698685-61698704 MS.gene003014:intron 25.0%
!! GTGGATTTTAGATTATGATA+TGG + chr2.2:61699199-61699218 MS.gene003014:intron 25.0%
!! TATTTGGAACTCACTTATTT+AGG - chr2.2:61698637-61698656 None:intergenic 25.0%
!! TCAAAATCTGCATTGATATT+TGG + chr2.2:61702367-61702386 MS.gene003014:intron 25.0%
!! TTAAAATTTCCCTTTTGATG+AGG + chr2.2:61698881-61698900 MS.gene003014:intron 25.0%
!! TTAAGCTATGCATTTTTCTT+CGG + chr2.2:61700193-61700212 MS.gene003014:intron 25.0%
!! TTTAACTTTGTCTTCTTTGA+AGG + chr2.2:61700469-61700488 MS.gene003014:intron 25.0%
!! TTTTCTATGATGTTCATTGT+TGG + chr2.2:61699615-61699634 MS.gene003014:intron 25.0%
!!! ATAATTGTACTTTGAAACTG+TGG + chr2.2:61697741-61697760 MS.gene003014:intron 25.0%
!!! CAAGACATTGTTTCTTTTTT+TGG - chr2.2:61698409-61698428 None:intergenic 25.0%
!!! CATAGCTTAATCTCTTTTTT+AGG - chr2.2:61699276-61699295 None:intergenic 25.0%
!!! CTTGTACTCCTATTTTTAAT+TGG - chr2.2:61700856-61700875 None:intergenic 25.0%
!!! CTTTTTTTGTTTGACAAGTT+TGG + chr2.2:61697699-61697718 MS.gene003014:intron 25.0%
!!! GCTTGATAGTATTGTTTTTA+TGG + chr2.2:61698819-61698838 MS.gene003014:intron 25.0%
!!! TAATTGTACTTTGAAACTGT+GGG + chr2.2:61697742-61697761 MS.gene003014:intron 25.0%
!!! TCATGGAAATTATTTTAGGT+TGG + chr2.2:61697897-61697916 MS.gene003014:intron 25.0%
AACCTTATCACATAATGCAT+TGG + chr2.2:61699741-61699760 MS.gene003014:intron 30.0%
AATGTGGAGTGAAATCAAAA+TGG - chr2.2:61701109-61701128 None:intergenic 30.0%
AATGTTCTGTTTATGAGGAT+TGG + chr2.2:61701199-61701218 MS.gene003014:intron 30.0%
ACAGTGTAATCTTAATGAGA+AGG - chr2.2:61700235-61700254 None:intergenic 30.0%
ACATTATCCATGTAATAGTG+TGG - chr2.2:61702751-61702770 None:intergenic 30.0%
AGAAAATACAGTGGATACTT+AGG + chr2.2:61701688-61701707 MS.gene003014:CDS 30.0%
AGACAAAAATGCATGAGTTA+AGG - chr2.2:61698677-61698696 None:intergenic 30.0%
AGCAAGAGTTTATGAAGAAA+AGG + chr2.2:61701719-61701738 MS.gene003014:CDS 30.0%
AGCTAGTTGAAATAGTATCA+TGG + chr2.2:61700760-61700779 MS.gene003014:intron 30.0%
ATCAGAAGCAAATAAACAAC+TGG + chr2.2:61702653-61702672 MS.gene003014:CDS 30.0%
ATCCAATGCATTATGTGATA+AGG - chr2.2:61699746-61699765 None:intergenic 30.0%
CAGTGGAAATCTATTATCAT+AGG - chr2.2:61700332-61700351 None:intergenic 30.0%
CATCATAGAAAAATGCATGT+AGG - chr2.2:61699607-61699626 None:intergenic 30.0%
CCCATATATACAAATATCCA+TGG + chr2.2:61701069-61701088 MS.gene003014:intron 30.0%
CCCCACATATATTTGATTAT+AGG + chr2.2:61700925-61700944 MS.gene003014:intron 30.0%
CTATGATAATAGATTTCCAC+TGG + chr2.2:61700330-61700349 MS.gene003014:intron 30.0%
GAAAACTTTGGATCAATATG+TGG - chr2.2:61699854-61699873 None:intergenic 30.0%
GACAAAAATGCATGAGTTAA+GGG - chr2.2:61698676-61698695 None:intergenic 30.0%
GCAAATTTGAAAAATCATGG+TGG - chr2.2:61702083-61702102 None:intergenic 30.0%
GGTTTATCAATCAAAGGAAA+CGG + chr2.2:61702674-61702693 MS.gene003014:CDS 30.0%
GTAATGAATCCAAAATTTGG+AGG + chr2.2:61698977-61698996 MS.gene003014:intron 30.0%
TAAGACAGTACATTACTACA+AGG - chr2.2:61699964-61699983 None:intergenic 30.0%
TAATTAAACATTCACCCTTG+TGG + chr2.2:61700665-61700684 MS.gene003014:intron 30.0%
TAATTTGGCATTCAGTTACT+TGG - chr2.2:61701021-61701040 None:intergenic 30.0%
TAGTAGGTCCTTAAGAATAA+TGG + chr2.2:61699302-61699321 MS.gene003014:intron 30.0%
TCAAATGTTAACCTTCAATG+TGG + chr2.2:61700594-61700613 MS.gene003014:intron 30.0%
TCAATGATACACTAAAAGCT+TGG - chr2.2:61699779-61699798 None:intergenic 30.0%
TGAAGGTTAACATTTGAACT+AGG - chr2.2:61700591-61700610 None:intergenic 30.0%
TGTCTGAAAATAAAGGTAGA+TGG + chr2.2:61698692-61698711 MS.gene003014:intron 30.0%
TTAAGCTATGATGTGTTAGT+AGG + chr2.2:61699286-61699305 MS.gene003014:intron 30.0%
TTATTGCAAAAGCTACACAT+TGG - chr2.2:61702043-61702062 None:intergenic 30.0%
TTCCAAATACTTGAAACCAA+AGG + chr2.2:61698648-61698667 MS.gene003014:intron 30.0%
TTGGAGCTACAAAAAAATCA+CGG - chr2.2:61702024-61702043 None:intergenic 30.0%
TTGGATCAAAATAAGACGAT+TGG + chr2.2:61702311-61702330 MS.gene003014:intron 30.0%
! AAAAAGCATAGCTTCCTTTA+AGG - chr2.2:61698090-61698109 None:intergenic 30.0%
! AAAAGCATAGCTTCCTTTAA+GGG - chr2.2:61698089-61698108 None:intergenic 30.0%
! ACAACTGGTTTATCAATCAA+AGG + chr2.2:61702668-61702687 MS.gene003014:CDS 30.0%
! ATCCAAGTTTGTAAGGTTTT+CGG + chr2.2:61700114-61700133 MS.gene003014:intron 30.0%
! GGAATCAACTTTTTGCAAAT+CGG + chr2.2:61701414-61701433 MS.gene003014:intron 30.0%
! TGTTTATATGGTTAGGGTTT+TGG - chr2.2:61702469-61702488 None:intergenic 30.0%
! TTTGTCTTCTTTGAAGGAAA+AGG + chr2.2:61700475-61700494 MS.gene003014:intron 30.0%
! TTTTCTCATTTGTCTCATCA+AGG + chr2.2:61699355-61699374 MS.gene003014:intron 30.0%
!! AGTGATTTGCTAAAATTGTG+TGG + chr2.2:61701995-61702014 MS.gene003014:intron 30.0%
!! ATGTATATTTTTGTGTCTGC+AGG + chr2.2:61699469-61699488 MS.gene003014:intron 30.0%
!! GACAAATTTTGATACCACAA+GGG - chr2.2:61700682-61700701 None:intergenic 30.0%
!!! AAGCTATGCTTTTTCTTCAA+AGG + chr2.2:61698096-61698115 MS.gene003014:CDS 30.0%
!!! TATTTTGATCCAATGACCTT+TGG - chr2.2:61702304-61702323 None:intergenic 30.0%
AAAAGGAAAGCTTCCAAAAG+AGG + chr2.2:61701744-61701763 MS.gene003014:CDS 35.0%
AACATTTGAACTAGGTGCAT+AGG - chr2.2:61700583-61700602 None:intergenic 35.0%
AAGTCATCCACACTATTACA+TGG + chr2.2:61702741-61702760 MS.gene003014:CDS 35.0%
ACTCATCCATATACAACCAA+GGG + chr2.2:61700880-61700899 MS.gene003014:intron 35.0%
AGAACTTTCCAAACCCTTAA+AGG + chr2.2:61698073-61698092 MS.gene003014:CDS 35.0%
ATATGATCAGCTTGTAGTGA+AGG + chr2.2:61701565-61701584 MS.gene003014:intron 35.0%
ATCCAAAATTTGGAGGACTT+CGG + chr2.2:61698984-61699003 MS.gene003014:intron 35.0%
ATGTAATAGTGTGGATGACT+TGG - chr2.2:61702742-61702761 None:intergenic 35.0%
CAGAAGAAACCCTAATTCAT+TGG - chr2.2:61699053-61699072 None:intergenic 35.0%
CCAACAACAATAATTGCTAC+CGG - chr2.2:61701345-61701364 None:intergenic 35.0%
CTAAACACCACTCAAAGAAA+AGG + chr2.2:61700972-61700991 MS.gene003014:intron 35.0%
CTACACATCCATTATTTCCA+AGG - chr2.2:61700535-61700554 None:intergenic 35.0%
GCATCTAAACCCTGAAATAA+TGG - chr2.2:61700506-61700525 None:intergenic 35.0%
GCTGAAACTAGCATATATGT+TGG - chr2.2:61700743-61700762 None:intergenic 35.0%
GGAGTGAAATCAAAATGGTT+AGG - chr2.2:61701104-61701123 None:intergenic 35.0%
GTCATATGAATTGCATCCTT+AGG - chr2.2:61700952-61700971 None:intergenic 35.0%
GTGGCAAGAGATTAAGAAAA+AGG - chr2.2:61701852-61701871 None:intergenic 35.0%
TACTCATCCATATACAACCA+AGG + chr2.2:61700879-61700898 MS.gene003014:intron 35.0%
TATTTCAGGGTTTAGATGCA+TGG + chr2.2:61700507-61700526 MS.gene003014:intron 35.0%
TGGTGCTTATCAAAAAACTG+TGG + chr2.2:61699635-61699654 MS.gene003014:intron 35.0%
TGTAGTATATCATCGTATGC+TGG + chr2.2:61699918-61699937 MS.gene003014:intron 35.0%
TTAAAGTGGTGCTTACAGAT+GGG - chr2.2:61701819-61701838 None:intergenic 35.0%
TTTCTGTGACCTCATCAAAA+GGG - chr2.2:61698893-61698912 None:intergenic 35.0%
! AAAGAGGTAAAGTACTTTCC+TGG + chr2.2:61699163-61699182 MS.gene003014:intron 35.0%
! AAGAGGTAAAGTACTTTCCT+GGG + chr2.2:61699164-61699183 MS.gene003014:intron 35.0%
! ATGGTGTTAGATAGATCCAT+GGG - chr2.2:61702790-61702809 None:intergenic 35.0%
! CACCTTTGGTTTCAAGTATT+TGG - chr2.2:61698653-61698672 None:intergenic 35.0%
! CGGTAGCAATTATTGTTGTT+GGG + chr2.2:61701343-61701362 MS.gene003014:intron 35.0%
! CTTTTCTTTGAGTGGTGTTT+AGG - chr2.2:61700974-61700993 None:intergenic 35.0%
! TATGCATTTTTCTTCGGCTT+TGG + chr2.2:61700199-61700218 MS.gene003014:intron 35.0%
! TCCAAGTTTGTAAGGTTTTC+GGG + chr2.2:61700115-61700134 MS.gene003014:intron 35.0%
! TCTAGCTTCCAACTATGTAT+GGG + chr2.2:61699801-61699820 MS.gene003014:intron 35.0%
! TTTAAAGTGGTGCTTACAGA+TGG - chr2.2:61701820-61701839 None:intergenic 35.0%
!! AAAGGAGTGTCCATTATTTC+AGG + chr2.2:61700493-61700512 MS.gene003014:intron 35.0%
!! AAGGAGTGTCCATTATTTCA+GGG + chr2.2:61700494-61700513 MS.gene003014:intron 35.0%
!! AGGAAAGTACTTTACCTCTT+TGG - chr2.2:61699164-61699183 None:intergenic 35.0%
!! CAGCTTTTGAGAAAATACAG+TGG + chr2.2:61701679-61701698 MS.gene003014:CDS 35.0%
!! GGACAAATTTTGATACCACA+AGG - chr2.2:61700683-61700702 None:intergenic 35.0%
!! GTTACTTGGAAGGTATTTCA+TGG - chr2.2:61701007-61701026 None:intergenic 35.0%
!! TCATTGATTCACCACATTGA+AGG - chr2.2:61700608-61700627 None:intergenic 35.0%
!! TTCTAGCTTCCAACTATGTA+TGG + chr2.2:61699800-61699819 MS.gene003014:intron 35.0%
!! TTGAAAAATCATGGTGGACT+TGG - chr2.2:61702077-61702096 None:intergenic 35.0%
!!! TGGTTTTGATTTCTGCATCT+AGG + chr2.2:61700350-61700369 MS.gene003014:intron 35.0%
AAATGCTAACAAGTGCCCTA+AGG - chr2.2:61698476-61698495 None:intergenic 40.0%
AAGGGCAAGCTAATTACAAG+GGG + chr2.2:61700898-61700917 MS.gene003014:intron 40.0%
AATGCTAACAAGTGCCCTAA+GGG - chr2.2:61698475-61698494 None:intergenic 40.0%
ACCCGAAAACCTTACAAACT+TGG - chr2.2:61700119-61700138 None:intergenic 40.0%
ACCTTTCGATCTTGATCCAA+CGG + chr2.2:61702390-61702409 MS.gene003014:intron 40.0%
AGCAGAAGACAGGGAATTAA+AGG + chr2.2:61701654-61701673 MS.gene003014:CDS 40.0%
AGCCTACATCAACTGTCAAA+AGG + chr2.2:61697619-61697638 MS.gene003014:CDS 40.0%
ATAACAGGAATCACAGAAGC+TGG + chr2.2:61702606-61702625 MS.gene003014:intron 40.0%
ATAACCGTACAATGCCCTTA+GGG + chr2.2:61698458-61698477 MS.gene003014:intron 40.0%
ATAGTAGAGTAGCTCCAAAG+AGG + chr2.2:61699147-61699166 MS.gene003014:intron 40.0%
CAAGGCAACAATTGCTTGAA+TGG + chr2.2:61701767-61701786 MS.gene003014:CDS 40.0%
CAAGGGCAAGCTAATTACAA+GGG + chr2.2:61700897-61700916 MS.gene003014:intron 40.0%
CACATGAATAGAAGGCAAGT+TGG - chr2.2:61701230-61701249 None:intergenic 40.0%
CAGAAACTCTCAGATTTCAC+TGG + chr2.2:61698907-61698926 MS.gene003014:intron 40.0%
CATAGGCAATCACCTAGTTA+CGG + chr2.2:61701906-61701925 MS.gene003014:intron 40.0%
CATAGGGAGTAGTGTTTACA+CGG - chr2.2:61699383-61699402 None:intergenic 40.0%
CCGGTAGCAATTATTGTTGT+TGG + chr2.2:61701342-61701361 MS.gene003014:intron 40.0%
CTTGTTAACAAGTGCCCTAA+GGG + chr2.2:61698367-61698386 MS.gene003014:intron 40.0%
GAGAGGGATTGTCACTAATT+TGG - chr2.2:61701036-61701055 None:intergenic 40.0%
GATGCAGAAATCAAAACCAG+TGG - chr2.2:61700349-61700368 None:intergenic 40.0%
GCAGAAGACAGGGAATTAAA+GGG + chr2.2:61701655-61701674 MS.gene003014:CDS 40.0%
GTTTCTGTGACCTCATCAAA+AGG - chr2.2:61698894-61698913 None:intergenic 40.0%
TAAACACTACTCCCTATGGA+TGG + chr2.2:61699385-61699404 MS.gene003014:intron 40.0%
TAGCGTGACTTGAAAAACCA+TGG - chr2.2:61702123-61702142 None:intergenic 40.0%
TATCCATGCATGTCTGTGTT+TGG + chr2.2:61698284-61698303 MS.gene003014:intron 40.0%
TCCTTAAACAATGCCCCTTA+GGG - chr2.2:61698384-61698403 None:intergenic 40.0%
TCTCAGCAATTCATATCCCA+TGG + chr2.2:61702771-61702790 MS.gene003014:CDS 40.0%
TGACAACTCATGTTTCGACT+TGG + chr2.2:61701954-61701973 MS.gene003014:intron 40.0%
TGATCCAACGGTCAATAATG+TGG + chr2.2:61702402-61702421 MS.gene003014:intron 40.0%
TGCAAATCGGATTGAAGAGT+AGG + chr2.2:61701427-61701446 MS.gene003014:intron 40.0%
TGGTGAAGTATACATTCACG+AGG + chr2.2:61700430-61700449 MS.gene003014:intron 40.0%
TTCCTTAAACAATGCCCCTT+AGG - chr2.2:61698385-61698404 None:intergenic 40.0%
TTGACCACATTATTGACCGT+TGG - chr2.2:61702409-61702428 None:intergenic 40.0%
TTGGCATTCAGTTACTTGGA+AGG - chr2.2:61701017-61701036 None:intergenic 40.0%
TTGTTAACAAGTGCCCTAAG+GGG + chr2.2:61698368-61698387 MS.gene003014:intron 40.0%
! AATTGTTGCCTTGCCTCTTT+TGG - chr2.2:61701760-61701779 None:intergenic 40.0%
! ACTTGTTAACAAGTGCCCTA+AGG + chr2.2:61698366-61698385 MS.gene003014:intron 40.0%
! AGAGGTAAAGTACTTTCCTG+GGG + chr2.2:61699165-61699184 MS.gene003014:intron 40.0%
! CATAGCTTCCTTTAAGGGTT+TGG - chr2.2:61698084-61698103 None:intergenic 40.0%
! CATGGTGTTAGATAGATCCA+TGG - chr2.2:61702791-61702810 None:intergenic 40.0%
! GAAGATTGGTGGGTGAATTT+AGG + chr2.2:61699012-61699031 MS.gene003014:intron 40.0%
! GCAATAGCCTTTTCTTTGAG+TGG - chr2.2:61700982-61701001 None:intergenic 40.0%
! TCTTTTGGCCCATACATAGT+TGG - chr2.2:61699812-61699831 None:intergenic 40.0%
! TTCCGAAGTCCTCCAAATTT+TGG - chr2.2:61698989-61699008 None:intergenic 40.0%
!! ACTTGGAAGGTATTTCATGG+AGG - chr2.2:61701004-61701023 None:intergenic 40.0%
!! GACCTTTTGACAGTTGATGT+AGG - chr2.2:61697624-61697643 None:intergenic 40.0%
!! TGGTTAGGATTTTTGGACCA+TGG - chr2.2:61701089-61701108 None:intergenic 40.0%
AAAGTCACGTTGAACCACCA+TGG + chr2.2:61702103-61702122 MS.gene003014:intron 45.0%
AATTCCCTGTCTTCTGCTTG+AGG - chr2.2:61701652-61701671 None:intergenic 45.0%
AATTTGGAGGACTTCGGAAC+AGG + chr2.2:61698990-61699009 MS.gene003014:intron 45.0%
ACAAACTGCATGTCCTCTGA+AGG - chr2.2:61702709-61702728 None:intergenic 45.0%
ACCGTTGGATCAAGATCGAA+AGG - chr2.2:61702394-61702413 None:intergenic 45.0%
ACCTCGCAATTACCACTTCT+GGG - chr2.2:61699084-61699103 None:intergenic 45.0%
ACTAGGGTCTCTTGTGTGTA+TGG + chr2.2:61700377-61700396 MS.gene003014:intron 45.0%
AGATCCTCAAGCAGAAGACA+GGG + chr2.2:61701645-61701664 MS.gene003014:CDS 45.0%
AGCTTGCCCTTGGTTGTATA+TGG - chr2.2:61700889-61700908 None:intergenic 45.0%
AGGTGCATAGGATAAAGAGC+CGG - chr2.2:61700571-61700590 None:intergenic 45.0%
AGTGAAGGTGGAGATAGGAA+TGG + chr2.2:61701580-61701599 MS.gene003014:CDS 45.0%
ATGTGCAACTGCAGTGAGAA+TGG + chr2.2:61697956-61697975 MS.gene003014:CDS 45.0%
CATAACCGTACAATGCCCTT+AGG + chr2.2:61698457-61698476 MS.gene003014:intron 45.0%
CCAAGGGCAAGCTAATTACA+AGG + chr2.2:61700896-61700915 MS.gene003014:intron 45.0%
CGGATTGAAGAGTAGGTCTT+GGG + chr2.2:61701434-61701453 MS.gene003014:intron 45.0%
CGTGACTTGAAAAACCATGG+TGG - chr2.2:61702120-61702139 None:intergenic 45.0%
CGTGTAAACACTACTCCCTA+TGG + chr2.2:61699381-61699400 MS.gene003014:intron 45.0%
CTTCCAAACACAGACATGCA+TGG - chr2.2:61698290-61698309 None:intergenic 45.0%
CTTGTAGTGAAGGTGGAGAT+AGG + chr2.2:61701575-61701594 MS.gene003014:CDS 45.0%
GAAAGCTTCCAAAAGAGGCA+AGG + chr2.2:61701749-61701768 MS.gene003014:CDS 45.0%
GCATGGAGCCTTGGAAATAA+TGG + chr2.2:61700524-61700543 MS.gene003014:intron 45.0%
GGCAACAATTGCTTGAATGG+TGG + chr2.2:61701770-61701789 MS.gene003014:CDS 45.0%
GTGTAGATAATGTGCCTTCC+CGG + chr2.2:61700549-61700568 MS.gene003014:intron 45.0%
TACCTCGCAATTACCACTTC+TGG - chr2.2:61699085-61699104 None:intergenic 45.0%
TAGATCCTCAAGCAGAAGAC+AGG + chr2.2:61701644-61701663 MS.gene003014:CDS 45.0%
TCAATCAAAGGAAACGGCAC+TGG + chr2.2:61702680-61702699 MS.gene003014:CDS 45.0%
TCGGATTGAAGAGTAGGTCT+TGG + chr2.2:61701433-61701452 MS.gene003014:intron 45.0%
TCTGCATCTAGGCTTGACTA+GGG + chr2.2:61700361-61700380 MS.gene003014:intron 45.0%
TGATCAGCTTGTAGTGAAGG+TGG + chr2.2:61701568-61701587 MS.gene003014:intron 45.0%
TGATCCAATGACCTTTGGTG+TGG - chr2.2:61702299-61702318 None:intergenic 45.0%
TGATGTAGGCTTCCAAGAGA+CGG - chr2.2:61697610-61697629 None:intergenic 45.0%
TGTGCAACTGCAGTGAGAAT+GGG + chr2.2:61697957-61697976 MS.gene003014:CDS 45.0%
TTCAGAGGACATGCAGTTTG+TGG + chr2.2:61702708-61702727 MS.gene003014:CDS 45.0%
TTCGGAACAGGAAGATTGGT+GGG + chr2.2:61699002-61699021 MS.gene003014:intron 45.0%
TTCTGCATCTAGGCTTGACT+AGG + chr2.2:61700360-61700379 MS.gene003014:intron 45.0%
! GCAGTTGGATCAGGTTGTTT+AGG + chr2.2:61697987-61698006 MS.gene003014:CDS 45.0%
! TCCATGAACTGATCTAGAGC+TGG - chr2.2:61698020-61698039 None:intergenic 45.0%
! TTTGTATATATGGGGGCGCA+AGG - chr2.2:61701063-61701082 None:intergenic 45.0%
!! CATTGGTGTTGGTGCATTGA+AGG + chr2.2:61698741-61698760 MS.gene003014:intron 45.0%
!! CCTTGTAATTAGCTTGCCCT+TGG - chr2.2:61700899-61700918 None:intergenic 45.0%
!! GTTTCGACTTGGTGCATGTT+TGG + chr2.2:61701965-61701984 MS.gene003014:intron 45.0%
!! TCCAGCTCTAGATCAGTTCA+TGG + chr2.2:61698016-61698035 MS.gene003014:CDS 45.0%
!! TTGATTATTAATTAATTAAA+GGG + chr2.2:61698342-61698361 MS.gene003014:intron 5.0%
!! TTTGATTATTAATTAATTAA+AGG + chr2.2:61698341-61698360 MS.gene003014:intron 5.0%
AACCTTGCCACCACTTCACT+TGG - chr2.2:61697927-61697946 None:intergenic 50.0%
AGAATGGGTGGAGATGCAGT+TGG + chr2.2:61697972-61697991 MS.gene003014:CDS 50.0%
CACACCACACCAAAGGTCAT+TGG + chr2.2:61702292-61702311 MS.gene003014:intron 50.0%
CATAGGATAAAGAGCCGGGA+AGG - chr2.2:61700566-61700585 None:intergenic 50.0%
CTTCGGAACAGGAAGATTGG+TGG + chr2.2:61699001-61699020 MS.gene003014:intron 50.0%
GGACATGCAGTTTGTGGTGA+TGG + chr2.2:61702714-61702733 MS.gene003014:CDS 50.0%
GGACTTCGGAACAGGAAGAT+TGG + chr2.2:61698998-61699017 MS.gene003014:intron 50.0%
GGTGCATAGGATAAAGAGCC+GGG - chr2.2:61700570-61700589 None:intergenic 50.0%
GGTGGAGCAGACATTACAAG+TGG + chr2.2:61701788-61701807 MS.gene003014:CDS 50.0%
GGTTTAGATGCATGGAGCCT+TGG + chr2.2:61700515-61700534 MS.gene003014:intron 50.0%
GTGGTGCTTACAGATGGGTA+AGG - chr2.2:61701814-61701833 None:intergenic 50.0%
TCCCAGAAGTGGTAATTGCG+AGG + chr2.2:61699080-61699099 MS.gene003014:intron 50.0%
TCCTCACTATCACCGTCTCT+TGG + chr2.2:61697595-61697614 MS.gene003014:CDS 50.0%
TCTGCACTTGTTCCCAGAAG+TGG + chr2.2:61699069-61699088 MS.gene003014:intron 50.0%
! TCCAAGAGACGGTGATAGTG+AGG - chr2.2:61697599-61697618 None:intergenic 50.0%
! TTTGGTGTGGTGTGACTGCA+CGG - chr2.2:61702286-61702305 None:intergenic 50.0%
!! AGTGCCCTAAGGGCATTGTA+CGG - chr2.2:61698465-61698484 None:intergenic 50.0%
!! GCATGAGTTAAGGGCACCTT+TGG - chr2.2:61698667-61698686 None:intergenic 50.0%
!! GCCCTAAGGGGCATTGTTTA+AGG + chr2.2:61698380-61698399 MS.gene003014:intron 50.0%
CACCAAGTGAAGTGGTGGCA+AGG + chr2.2:61697922-61697941 MS.gene003014:CDS 55.0%
GCAACTGCAGTGAGAATGGG+TGG + chr2.2:61697960-61697979 MS.gene003014:CDS 55.0%
GGTGGAGATGCAGTTGGATC+AGG + chr2.2:61697978-61697997 MS.gene003014:CDS 55.0%
GTGCAGTCACACCACACCAA+AGG + chr2.2:61702285-61702304 MS.gene003014:intron 55.0%
TCCACTATGCACTTGTCCCC+AGG - chr2.2:61699184-61699203 None:intergenic 55.0%
TCCTGGGGACAAGTGCATAG+TGG + chr2.2:61699180-61699199 MS.gene003014:intron 55.0%
! GGTTGGAGCACCAAGTGAAG+TGG + chr2.2:61697914-61697933 MS.gene003014:intron 55.0%
! TGGAGCACCAAGTGAAGTGG+TGG + chr2.2:61697917-61697936 MS.gene003014:CDS 55.0%
!! CTGGCTCTAGCAGAGTCAAC+AGG + chr2.2:61702625-61702644 MS.gene003014:CDS 55.0%
! ACGGCACTGGAAGCCTTCAG+AGG + chr2.2:61702693-61702712 MS.gene003014:CDS 60.0%
! GGGGGCGCAAGGAAAAGAGA+GGG - chr2.2:61701052-61701071 None:intergenic 60.0%
! TGGGGGCGCAAGGAAAAGAG+AGG - chr2.2:61701053-61701072 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 61697587 61702816 61697587 ID=MS.gene003014
chr2.2 mRNA 61697587 61702816 61697587 ID=MS.gene003014.t1;Parent=MS.gene003014
chr2.2 exon 61697587 61697640 61697587 ID=MS.gene003014.t1.exon1;Parent=MS.gene003014.t1
chr2.2 CDS 61697587 61697640 61697587 ID=cds.MS.gene003014.t1;Parent=MS.gene003014.t1
chr2.2 exon 61697915 61698170 61697915 ID=MS.gene003014.t1.exon2;Parent=MS.gene003014.t1
chr2.2 CDS 61697915 61698170 61697915 ID=cds.MS.gene003014.t1;Parent=MS.gene003014.t1
chr2.2 exon 61701575 61701822 61701575 ID=MS.gene003014.t1.exon3;Parent=MS.gene003014.t1
chr2.2 CDS 61701575 61701822 61701575 ID=cds.MS.gene003014.t1;Parent=MS.gene003014.t1
chr2.2 exon 61702613 61702816 61702613 ID=MS.gene003014.t1.exon4;Parent=MS.gene003014.t1
chr2.2 CDS 61702613 61702816 61702613 ID=cds.MS.gene003014.t1;Parent=MS.gene003014.t1
Gene Sequence

>MS.gene003014

ATGGCTCATCCTCACTATCACCGTCTCTTGGAAGCCTACATCAACTGTCAAAAGGTCAGAAAAAAAAAAGATAATTATTTTGAAAACGATGTGTGTAATTAATTTCTTTGTACTTTTTTTGTTTGACAAGTTTGGATCTGACGAGCTGTGTTGTATAATTGTACTTTGAAACTGTGGGCTTTTGTTTTCATTTCCATTTATTACTAATATTGACAAACTATCATGTATATTATTGTAAGTCAAAACCCTTTTAAGCATAGATGATAAAGACACTTCATTTCATGACTATTTTTTTCATAAATTTTTTACTTCATGGAAATTATTTTAGGTTGGAGCACCAAGTGAAGTGGTGGCAAGGTTAGAAGAAGCATGTGCAACTGCAGTGAGAATGGGTGGAGATGCAGTTGGATCAGGTTGTTTAGGTGAAGATCCAGCTCTAGATCAGTTCATGGAAGCTTACTGTGAGATGCTTATCAAGTATGAGCAAGAACTTTCCAAACCCTTAAAGGAAGCTATGCTTTTTCTTCAAAGGATTGAAGTCCAGTTCAAAAATCTTACAGTTTCTTCTTCTTCAGATAATATTGGTGATAATAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGAAAATACTATTCAGATTTTAAATCATAATCTTGATTGCTTGCTTGATATTTGTTGCTGTTTACATATGTATCCATGCATGTCTGTGTTTGGAAGAGTTTGTTAATTTTGTTAGTATGTAAAAGTGTTTGATTATTAATTAATTAAAGGGCACTTGTTAACAAGTGCCCTAAGGGGCATTGTTTAAGGAACCCAAAAAAAGAAACAATGTCTTGAAAATACAAGTCAAACATTTTTTAGAGTCATAACCGTACAATGCCCTTAGGGCACTTGTTAGCATTTTCCTTAATTAAATTAAATTGAAGTTAATGACAAGATCTACTTTTTCTTTGCAGCTTTTCATAAAAAAATTCTTAATTAGTCTTTCTCATTGATTTTTCATTTTATATTTCTAGCTTGTACTCTTTTTAATCTTCTTTGCCTAAATAAGTGAGTTCCAAATACTTGAAACCAAAGGTGCCCTTAACTCATGCATTTTTGTCTGAAAATAAAGGTAGATGGTGATGTTTAGTAGTACATATATATTTCATTGGTGTTGGTGCATTGAAGGAACTTAACTATATAGGCATCTTGTTAAATTCGTCGTTTCTTGTGTGTGTGTGTGCGCTTGATAGTATTGTTTTTATGGGAACTATAAGACTTACATCATCACATATATAGCTTTTTCTTAAAATTTCCCTTTTGATGAGGTCACAGAAACTCTCAGATTTCACTGGCTTTTGTAGTGTTCTTAATATATTAACATTATTAAAGAATCTACTTTGTAATGAATCCAAAATTTGGAGGACTTCGGAACAGGAAGATTGGTGGGTGAATTTAGGTTTTGTAAATAATAACCAATGAATTAGGGTTTCTTCTGCACTTGTTCCCAGAAGTGGTAATTGCGAGGTATATACTCACAAGTTTCTTTCTAAATTGGAATGCAAAATGCAGATAGTAGAGTAGCTCCAAAGAGGTAAAGTACTTTCCTGGGGACAAGTGCATAGTGGATTTTAGATTATGATATGGATCAATTAACATGAAAAAAATCTTGCAAAGTTGATTGGATTTGATTAATGACCTAAAAAAGAGATTAAGCTATGATGTGTTAGTAGGTCCTTAAGAATAATGGTGAGTTTAATTGATTTGTTCTCTTGCTTCTTTTTCTCATTTGTCTCATCAAGGTTCCGTGTAAACACTACTCCCTATGGATGGAATATTTTATTAATTTGTATAATTTCATATAGATAGTGTGATTATATGTGTTGTCATCATTATGTATATTTTTGTGTCTGCAGGTATAGATGCATATTATAATGCTTGTAAAATTATGTTTGTGTGTTGATATTATTATATATATTTGATAAAAAACTTGTTTGCTTGTCTTTAACTAAAAATGGATATACATTGTCCTACATGCATTTTTCTATGATGTTCATTGTTGGTGCTTATCAAAAAACTGTGGCATCTATGTTGAATGAAGACTACAATTGAATTTGAGTCAAACTTTGCTGCTATAGAGTTAATGACTATGATGAAAATAAGCAGAACCTTATCACATAATGCATTGGATATAAACATGACCAAGCTTTTAGTGTATCATTGATTTCTAGCTTCCAACTATGTATGGGCCAAAAGAAGTATATAGTAGTAACTTTCCACATATTGATCCAAAGTTTTCAATTCAATGTTTCTTATCTTTATGTTCATGTTCCCCTCTATTTTTGTAGTATATCATCGTATGCTGGTTTTTCAATTATTGAAGTCTCCTTGTAGTAATGTACTGTCTTACCCTTCAAAACATAAAAAAACTTGAACTTCCACTTATCAATTATACATGTTTTTGTTTATGCTTTTGATGTGTTAATTTTGTTAAACTCTCCTATATAGAAAGATTATCTTAGGTTTTGGTTCTAACTAAATCCAAGTTTGTAAGGTTTTCGGGTGTCCATTTTATAAAGAAAATCGATCGATCTTCGACTTGAGTTTTTTCCATTTAGTTAAGCTATGCATTTTTCTTCGGCTTTGGCATCTGAAAACCTTCTCATTAAGATTACACTGTGTTAATTCTAATAATTAATAACAATGGCCTTTGATTATGTTTGAAGTAATATAATATATTGTACCATTTTTATCCCTATGATAATAGATTTCCACTGGTTTTGATTTCTGCATCTAGGCTTGACTAGGGTCTCTTGTGTGTATGGATTATGTTGCCCTTCATAAGTTAAGTATTTTGGTGAAGTATACATTCACGAGGAATAAACTTTATCATCTTTAACTTTGTCTTCTTTGAAGGAAAAGGAGTGTCCATTATTTCAGGGTTTAGATGCATGGAGCCTTGGAAATAATGGATGTGTAGATAATGTGCCTTCCCGGCTCTTTATCCTATGCACCTAGTTCAAATGTTAACCTTCAATGTGGTGAATCAATGATTTTCAATGATTGAAGATTGTACTTTTATCCTTTATTTAATTAAACATTCACCCTTGTGGTATCAAAATTTGTCCTAACCAATAATTTAGTAGCTTAGCTTGGCATTTAAATCCAACATATATGCTAGTTTCAGCTAGTTGAAATAGTATCATGGTTTAAAAAGTTAAGCTACTATGTTTGTTAACCTTATTGGTTTACTTTTATGTAAACAGCAAAGAAGAGTTCCAATTAAAAATAGGAGTACAAGGGGTACTCATCCATATACAACCAAGGGCAAGCTAATTACAAGGGGTACCCCCCACATATATTTGATTATAGGACCTAAGGATGCAATTCATATGACCTAAACACCACTCAAAGAAAAGGCTATTGCCTCCATGAAATACCTTCCAAGTAACTGAATGCCAAATTAGTGACAATCCCTCTCTTTTCCTTGCGCCCCCATATATACAAATATCCATGGTCCAAAAATCCTAACCATTTTGATTTCACTCCACATTGTTAATATTTTAACCTTTTTTTTATATATATATATATTTTCTTCCAATGTTAGATTTCTATATTTATTTTAATGTTCTGTTTATGAGGATTGGTTTTGCCAACTTGCCTTCTATTCATGTGTAAGTAATATTGATAGTAAATAAGAAGTCAAACAATAAAAAAAATTGTTACTGTTGTTTTAAAAAAAAAATGATGACTATAAATTGTTTTTACCGGTAGCAATTATTGTTGTTGGGTAAAAGCTCAAGTGTCACATTGCTTAGAAATGTCATAACATAGAACTTGGAATCAACTTTTTGCAAATCGGATTGAAGAGTAGGTCTTGGGATATACACAATACTATGTATTTTGAATACAACCTTTTATTTTCATATATTCAAAATATCCTTCTAATGTTATATTATTTGCAATCATCATAATTGATTTGATTCATATATATGATCAGCTTGTAGTGAAGGTGGAGATAGGAATGGATCATCTGAAGAAGATCATGTTGATATGTACAACAACATGATAGATCCTCAAGCAGAAGACAGGGAATTAAAGGGTCAGCTTTTGAGAAAATACAGTGGATACTTAGGCAGTCTGAAGCAAGAGTTTATGAAGAAAAGGAAAAAAGGAAAGCTTCCAAAAGAGGCAAGGCAACAATTGCTTGAATGGTGGAGCAGACATTACAAGTGGCCTTACCCATCTGTAAGCACCACTTTAAAAATTTGAATCCTTTTTCTTAATCTCTTGCCACAATATTTCTAATTAAATTTTGATTTCTTTCATTTCATAGGCAATCACCTAGTTACGGATTTTAATAAATTAATCAAAGATAATGACAACTCATGTTTCGACTTGGTGCATGTTTGGATTCACGAGTGATTTGCTAAAATTGTGTGGAGACCGTGATTTTTTTGTAGCTCCAATGTGTAGCTTTTGCAATAAGTCATGATCAACCAAGTCCACCATGATTTTTCAAATTTGCAAAGTCACGTTGAACCACCATGGTTTTTCAAGTCACGCTAAGCCGAACATGCATTTAGTATTTGAAGACTGATTTTTTAAGGTCAAAATGTGAGTTGTTTGCATTAATTTGAAGGTTTCGCATGACTATATTCTATATCAAATGTGTAAATTGGATTTGGGTTGTTGAGCAGTCACAATACCGTGCAGTCACACCACACCAAAGGTCATTGGATCAAAATAAGACGATTGGATTTAAAGTTTAGTGTGTTAGATTTTTTTTTAATCAAAATCTGCATTGATATTTGGACCTTTCGATCTTGATCCAACGGTCAATAATGTGGTCAACTGTGTGACTTGACGATTTTGTGATTTCACACGCAATCCAAAACCCTAACCATATAAACATGTATTGTACAATTTACTTTTTTTGAAGGTAAGAATTTTACTTTATAATAACTAGCATGAAGACAAATTGATAATAAGTTGTCTCACACAATTCAAATGTACTACTATAATTTATGAATAACAGGAATCACAGAAGCTGGCTCTAGCAGAGTCAACAGGTCTTGATCAGAAGCAAATAAACAACTGGTTTATCAATCAAAGGAAACGGCACTGGAAGCCTTCAGAGGACATGCAGTTTGTGGTGATGGATCCAAGTCATCCACACTATTACATGGATAATGTTCTCAGCAATTCATATCCCATGGATCTATCTAACACCATGCTCTAG
Protein sequence

>MS.gene003014.t1

MAHPHYHRLLEAYINCQKVGAPSEVVARLEEACATAVRMGGDAVGSGCLGEDPALDQFMEAYCEMLIKYEQELSKPLKEAMLFLQRIEVQFKNLTVSSSSDNIACSEGGDRNGSSEEDHVDMYNNMIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPSHPHYYMDNVLSNSYPMDLSNTML