Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003114.t1 | XP_024631359.1 | 94.1 | 697 | 39 | 1 | 1 | 697 | 1 | 695 | 0.00E+00 | 1345.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003114.t1 | Q9LKR4 | 56.4 | 670 | 286 | 3 | 5 | 670 | 8 | 675 | 1.8e-218 | 760.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003114.t1 | A0A396J3Q9 | 94.1 | 697 | 39 | 1 | 1 | 697 | 1 | 695 | 0.0e+00 | 1345.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene003114.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003114.t1 | MTR_3g450850 | 45.200 | 250 | 118 | 3 | 54 | 295 | 48 | 286 | 2.76e-63 | 214 |
MS.gene003114.t1 | MTR_4g035820 | 34.909 | 275 | 163 | 5 | 40 | 311 | 63 | 324 | 1.32e-44 | 170 |
MS.gene003114.t1 | MTR_6g051425 | 28.296 | 311 | 197 | 8 | 31 | 336 | 2 | 291 | 2.04e-24 | 105 |
MS.gene003114.t1 | MTR_3g012160 | 44.660 | 103 | 47 | 1 | 194 | 296 | 1 | 93 | 3.49e-23 | 94.7 |
MS.gene003114.t1 | MTR_1g070355 | 28.340 | 247 | 148 | 7 | 59 | 297 | 80 | 305 | 3.42e-19 | 92.0 |
MS.gene003114.t1 | MTR_5g076070 | 26.141 | 241 | 163 | 5 | 56 | 295 | 56 | 282 | 1.85e-16 | 80.9 |
MS.gene003114.t1 | MTR_6g014355 | 39.516 | 124 | 63 | 3 | 126 | 247 | 13 | 126 | 7.44e-16 | 78.2 |
MS.gene003114.t1 | MTR_6g022080 | 30.769 | 143 | 88 | 3 | 65 | 202 | 97 | 233 | 1.05e-11 | 66.2 |
MS.gene003114.t1 | MTR_2g101460 | 38.235 | 102 | 60 | 2 | 65 | 165 | 67 | 166 | 1.78e-11 | 64.7 |
MS.gene003114.t1 | MTR_7g446520 | 24.280 | 243 | 149 | 5 | 59 | 298 | 94 | 304 | 1.90e-11 | 66.6 |
MS.gene003114.t1 | MTR_2g101460 | 38.235 | 102 | 60 | 2 | 65 | 165 | 57 | 156 | 1.97e-11 | 64.3 |
MS.gene003114.t1 | MTR_3g095940 | 51.724 | 58 | 28 | 0 | 499 | 556 | 86 | 143 | 2.22e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003114.t1 | AT5G28530 | 56.607 | 666 | 287 | 2 | 5 | 670 | 8 | 671 | 0.0 | 785 |
MS.gene003114.t1 | AT5G28530 | 56.607 | 666 | 287 | 2 | 5 | 670 | 8 | 671 | 0.0 | 785 |
MS.gene003114.t1 | AT5G28530 | 56.418 | 670 | 286 | 3 | 5 | 670 | 8 | 675 | 0.0 | 781 |
MS.gene003114.t1 | AT5G28530 | 49.851 | 670 | 267 | 5 | 5 | 670 | 8 | 612 | 0.0 | 650 |
MS.gene003114.t1 | AT5G28530 | 48.198 | 666 | 280 | 5 | 5 | 670 | 8 | 608 | 0.0 | 628 |
MS.gene003114.t1 | AT1G10240 | 42.256 | 665 | 355 | 8 | 30 | 678 | 24 | 675 | 0.0 | 543 |
MS.gene003114.t1 | AT1G10240 | 42.256 | 665 | 355 | 8 | 30 | 678 | 24 | 675 | 0.0 | 543 |
MS.gene003114.t1 | AT4G38180 | 30.912 | 592 | 379 | 12 | 51 | 627 | 71 | 647 | 1.29e-71 | 248 |
MS.gene003114.t1 | AT4G15090 | 26.604 | 639 | 418 | 15 | 51 | 665 | 49 | 660 | 1.51e-61 | 221 |
MS.gene003114.t1 | AT4G15090 | 26.604 | 639 | 418 | 15 | 51 | 665 | 49 | 660 | 1.51e-61 | 221 |
MS.gene003114.t1 | AT4G15090 | 26.604 | 639 | 418 | 15 | 51 | 665 | 49 | 660 | 1.51e-61 | 221 |
MS.gene003114.t1 | AT4G15090 | 26.604 | 639 | 418 | 15 | 51 | 665 | 49 | 660 | 1.51e-61 | 221 |
MS.gene003114.t1 | AT4G15090 | 26.604 | 639 | 418 | 15 | 51 | 665 | 49 | 660 | 1.51e-61 | 221 |
MS.gene003114.t1 | AT2G27110 | 27.464 | 619 | 373 | 18 | 30 | 622 | 19 | 587 | 3.82e-57 | 209 |
MS.gene003114.t1 | AT2G27110 | 27.464 | 619 | 373 | 18 | 30 | 622 | 19 | 587 | 3.82e-57 | 209 |
MS.gene003114.t1 | AT3G06250 | 26.504 | 615 | 355 | 18 | 27 | 612 | 155 | 701 | 1.48e-51 | 191 |
MS.gene003114.t1 | AT3G06250 | 26.504 | 615 | 355 | 18 | 27 | 612 | 155 | 701 | 1.48e-51 | 191 |
MS.gene003114.t1 | AT3G06250 | 26.504 | 615 | 355 | 18 | 27 | 612 | 155 | 701 | 1.48e-51 | 191 |
MS.gene003114.t1 | AT2G27110 | 30.049 | 406 | 261 | 9 | 234 | 622 | 43 | 442 | 1.35e-49 | 185 |
MS.gene003114.t1 | AT1G76320 | 26.254 | 678 | 424 | 22 | 57 | 696 | 1 | 640 | 1.37e-49 | 184 |
MS.gene003114.t1 | AT1G76320 | 25.991 | 681 | 422 | 22 | 57 | 696 | 1 | 640 | 4.51e-49 | 184 |
MS.gene003114.t1 | AT1G76320 | 25.991 | 681 | 422 | 22 | 57 | 696 | 1 | 640 | 6.43e-49 | 184 |
MS.gene003114.t1 | AT1G76320 | 25.991 | 681 | 422 | 22 | 57 | 696 | 1 | 640 | 6.43e-49 | 184 |
MS.gene003114.t1 | AT5G18960 | 27.090 | 598 | 358 | 19 | 31 | 612 | 190 | 725 | 7.33e-49 | 184 |
MS.gene003114.t1 | AT5G18960 | 27.090 | 598 | 358 | 19 | 31 | 612 | 190 | 725 | 7.33e-49 | 184 |
MS.gene003114.t1 | AT3G22170 | 24.872 | 587 | 379 | 16 | 51 | 613 | 68 | 616 | 1.93e-48 | 183 |
MS.gene003114.t1 | AT3G22170 | 24.872 | 587 | 379 | 16 | 51 | 613 | 68 | 616 | 1.93e-48 | 183 |
MS.gene003114.t1 | AT1G52520 | 25.077 | 646 | 421 | 22 | 52 | 668 | 84 | 695 | 3.41e-42 | 164 |
MS.gene003114.t1 | AT1G80010 | 23.767 | 669 | 437 | 20 | 28 | 657 | 72 | 706 | 2.09e-39 | 155 |
MS.gene003114.t1 | AT2G32250 | 25.835 | 449 | 304 | 11 | 258 | 685 | 187 | 627 | 1.46e-38 | 153 |
MS.gene003114.t1 | AT2G32250 | 25.835 | 449 | 304 | 11 | 258 | 685 | 187 | 627 | 1.46e-38 | 153 |
MS.gene003114.t1 | AT2G32250 | 25.835 | 449 | 304 | 11 | 258 | 685 | 187 | 627 | 1.46e-38 | 153 |
MS.gene003114.t1 | AT2G32250 | 25.835 | 449 | 304 | 11 | 258 | 685 | 187 | 627 | 1.48e-38 | 153 |
MS.gene003114.t1 | AT2G32250 | 25.835 | 449 | 304 | 11 | 258 | 685 | 187 | 627 | 1.63e-38 | 153 |
MS.gene003114.t1 | AT2G32250 | 25.835 | 449 | 304 | 11 | 258 | 685 | 187 | 627 | 1.63e-38 | 153 |
MS.gene003114.t1 | AT2G32250 | 25.835 | 449 | 304 | 11 | 258 | 685 | 146 | 586 | 2.11e-38 | 152 |
MS.gene003114.t1 | AT2G32250 | 25.835 | 449 | 304 | 11 | 258 | 685 | 146 | 586 | 2.40e-38 | 152 |
MS.gene003114.t1 | AT4G19990 | 24.302 | 609 | 376 | 14 | 56 | 632 | 38 | 593 | 2.05e-37 | 150 |
MS.gene003114.t1 | AT4G19990 | 24.302 | 609 | 376 | 14 | 56 | 632 | 24 | 579 | 2.25e-37 | 149 |
MS.gene003114.t1 | AT4G19990 | 24.302 | 609 | 376 | 14 | 56 | 632 | 24 | 579 | 2.25e-37 | 149 |
MS.gene003114.t1 | AT4G19990 | 24.532 | 587 | 361 | 13 | 56 | 613 | 24 | 557 | 2.61e-37 | 149 |
MS.gene003114.t1 | AT4G19990 | 24.532 | 587 | 361 | 13 | 56 | 613 | 24 | 557 | 2.61e-37 | 149 |
MS.gene003114.t1 | AT4G19990 | 24.302 | 609 | 376 | 14 | 56 | 632 | 24 | 579 | 2.64e-37 | 149 |
MS.gene003114.t1 | AT4G38170 | 26.171 | 363 | 255 | 6 | 272 | 622 | 45 | 406 | 1.70e-33 | 135 |
MS.gene003114.t1 | AT4G19990 | 24.165 | 509 | 321 | 10 | 119 | 613 | 43 | 500 | 6.53e-33 | 135 |
Find 133 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCCAAATGGTTTCTGATTT+TGG | 0.102866 | 2.2:+60431137 | MS.gene003114:CDS |
CAGAGGAATTTGAACTTAAA+TGG | 0.181226 | 2.2:+60431114 | MS.gene003114:CDS |
TTATCTGCTTTCACCGATTC+TGG | 0.206477 | 2.2:-60429897 | None:intergenic |
TCTTATCGATCGATTACTTA+TGG | 0.224783 | 2.2:+60430677 | MS.gene003114:CDS |
AGGTGGACATTTGTCTTTCT+TGG | 0.238238 | 2.2:+60430403 | MS.gene003114:CDS |
CCATTTGCCTTCCTCTTAAC+CGG | 0.251085 | 2.2:-60430110 | None:intergenic |
AAGCCTTCAAACTAGCTATT+TGG | 0.254902 | 2.2:-60432399 | None:intergenic |
CGTGCATAATCACGAGCTTT+TGG | 0.255977 | 2.2:+60430244 | MS.gene003114:CDS |
ACATATTGATTTACTGTATT+CGG | 0.284863 | 2.2:+60431175 | MS.gene003114:CDS |
TGTATTCGGTTCGAGCATAT+TGG | 0.298238 | 2.2:+60431189 | MS.gene003114:CDS |
GAAAAGGGAAAATGATGTTT+TGG | 0.322914 | 2.2:+60430496 | MS.gene003114:CDS |
GCTTTCGAAAGCTGGGTTTC+CGG | 0.342293 | 2.2:+60430337 | MS.gene003114:CDS |
AAATCGGAAGAAGGTTATTC+AGG | 0.354212 | 2.2:+60430451 | MS.gene003114:CDS |
ATACTCTTGCTTTCGAAAGC+TGG | 0.354980 | 2.2:+60430329 | MS.gene003114:CDS |
TTCTTTCATCAGTTCTTTGC+GGG | 0.358476 | 2.2:-60432286 | None:intergenic |
ATTGAATGTGGATTTAAATT+CGG | 0.362006 | 2.2:-60431069 | None:intergenic |
TGCAAGGAATTTGAATCATC+GGG | 0.363156 | 2.2:+60432042 | MS.gene003114:CDS |
TACCAAACCACACTCCAAAA+AGG | 0.366681 | 2.2:-60430703 | None:intergenic |
GTATTCGGTTCGAGCATATT+GGG | 0.368888 | 2.2:+60431190 | MS.gene003114:CDS |
CTCAGGAAATTCACTTCTAA+TGG | 0.369848 | 2.2:-60430967 | None:intergenic |
AACAATGTCCTTGTGGAGAT+TGG | 0.375018 | 2.2:+60429823 | MS.gene003114:CDS |
TTAAACACCATTCCAACATA+AGG | 0.399971 | 2.2:-60429948 | None:intergenic |
TCTAGAATTAGCCCTCAATT+AGG | 0.402768 | 2.2:+60430044 | MS.gene003114:CDS |
GTCATCATCTGCTTCTTTCG+TGG | 0.402884 | 2.2:-60430540 | None:intergenic |
TGAGGAACTTTGTGCAAAAT+CGG | 0.408597 | 2.2:+60430435 | MS.gene003114:CDS |
AGGCATTGCTTAATGAGAAA+AGG | 0.415782 | 2.2:+60430480 | MS.gene003114:CDS |
TCTAATGGCATCTTTAAGTC+CGG | 0.417527 | 2.2:-60430952 | None:intergenic |
TAAACACCATTCCAACATAA+GGG | 0.418566 | 2.2:-60429947 | None:intergenic |
CCGGGTTTGCCCCGGTTAAG+AGG | 0.420690 | 2.2:+60430099 | MS.gene003114:CDS |
GAAAATATAGCTTGGTCATA+TGG | 0.423296 | 2.2:+60430602 | MS.gene003114:CDS |
CCACGTTTAAAGATCGTTCT+CGG | 0.425296 | 2.2:-60432149 | None:intergenic |
GACATCTTCCTTTCATGAAC+CGG | 0.427391 | 2.2:-60430902 | None:intergenic |
GAAAATGCTTGAGCTTGAAA+AGG | 0.428355 | 2.2:+60430373 | MS.gene003114:CDS |
GTCCAAAATCAGAAACCATT+TGG | 0.428679 | 2.2:-60431139 | None:intergenic |
ATTTCTTAGCAATAAAACTT+TGG | 0.431448 | 2.2:-60432188 | None:intergenic |
CGGTTAAGAGGAAGGCAAAT+GGG | 0.435855 | 2.2:+60430111 | MS.gene003114:CDS |
TGCTAAAATGTATCTGTCTA+AGG | 0.437024 | 2.2:+60430175 | MS.gene003114:CDS |
ACAAATACTACTTAAGTAGA+TGG | 0.437071 | 2.2:+60432124 | MS.gene003114:CDS |
TACTCTTGCTTTCGAAAGCT+GGG | 0.437822 | 2.2:+60430330 | MS.gene003114:CDS |
ATGGAGAGCGACACGTGTTA+TGG | 0.440990 | 2.2:+60431989 | MS.gene003114:CDS |
GTTAATAAGAATGTCGTGTT+TGG | 0.444083 | 2.2:+60430632 | MS.gene003114:CDS |
GAGCTTGAAAAGGGAATTCA+AGG | 0.444538 | 2.2:+60430383 | MS.gene003114:CDS |
CTACTTAAGTAGTATTTGTC+GGG | 0.448293 | 2.2:-60432120 | None:intergenic |
CATTTGCCTTCCTCTTAACC+GGG | 0.453188 | 2.2:-60430109 | None:intergenic |
CTTCAAAAGACGTATGGATT+CGG | 0.455725 | 2.2:+60429796 | MS.gene003114:CDS |
ACATTTGTCTTTCTTGGAAA+GGG | 0.456261 | 2.2:+60430409 | MS.gene003114:CDS |
CGTGTTATGGCTACCAGAAA+AGG | 0.458295 | 2.2:+60432002 | MS.gene003114:CDS |
CTCCGCGCATGCTCTTCAAT+TGG | 0.460247 | 2.2:-60431850 | None:intergenic |
AACCTTCTCATTCTCATCCA+TGG | 0.461287 | 2.2:-60430579 | None:intergenic |
CAATGTACAAATCTTAGAAC+TGG | 0.461973 | 2.2:+60431823 | MS.gene003114:CDS |
GTTCTTTCATCAGTTCTTTG+CGG | 0.462201 | 2.2:-60432287 | None:intergenic |
CTAATGGCATCTTTAAGTCC+GGG | 0.464686 | 2.2:-60430951 | None:intergenic |
CCTCGATGCAGGTGTTTCTC+CGG | 0.467695 | 2.2:+60430883 | MS.gene003114:intron |
TTCTAAACAAGGTATCTAGT+TGG | 0.469074 | 2.2:+60431018 | MS.gene003114:CDS |
ATGGGGAGCATCATAGAGAT+AGG | 0.469186 | 2.2:+60430129 | MS.gene003114:CDS |
CATAAAAGCATCTATAGACT+TGG | 0.476239 | 2.2:-60431267 | None:intergenic |
GGCATTGCTTAATGAGAAAA+GGG | 0.476407 | 2.2:+60430481 | MS.gene003114:CDS |
TTATCGATCCGGGTTTGCCC+CGG | 0.478798 | 2.2:+60430091 | MS.gene003114:CDS |
AGGTTCTGCAGCACCAGAAT+CGG | 0.478841 | 2.2:+60429884 | MS.gene003114:CDS |
CTGTCTAAGGAGGTTGTTGA+CGG | 0.480756 | 2.2:+60430188 | MS.gene003114:CDS |
GATATCATTACCCCTTATGT+TGG | 0.483803 | 2.2:+60429936 | MS.gene003114:CDS |
CCTCTTAACCGGGGCAAACC+CGG | 0.485059 | 2.2:-60430099 | None:intergenic |
CCGGTTAAGAGGAAGGCAAA+TGG | 0.486458 | 2.2:+60430110 | MS.gene003114:CDS |
TCTACTTAAGTAGTATTTGT+CGG | 0.487675 | 2.2:-60432121 | None:intergenic |
GACATTTGTCTTTCTTGGAA+AGG | 0.490686 | 2.2:+60430408 | MS.gene003114:CDS |
TGTCTAAGGAGGTTGTTGAC+GGG | 0.496899 | 2.2:+60430189 | MS.gene003114:CDS |
TGAGACTAAACACGTCATTC+CGG | 0.497303 | 2.2:+60430986 | MS.gene003114:CDS |
TCTAGATCTTGCTTTCCTCA+TGG | 0.497710 | 2.2:-60430027 | None:intergenic |
CGCTTGTAAACGCCTAATTG+AGG | 0.499806 | 2.2:-60430056 | None:intergenic |
TTGCAAGGAATTTGAATCAT+CGG | 0.500581 | 2.2:+60432041 | MS.gene003114:CDS |
TCATGAATCTTCCGATAAGC+AGG | 0.501312 | 2.2:-60430290 | None:intergenic |
TGAACTTAAATGGAGCCAAA+TGG | 0.503893 | 2.2:+60431124 | MS.gene003114:CDS |
AAAATGCTTGAGCTTGAAAA+GGG | 0.510249 | 2.2:+60430374 | MS.gene003114:CDS |
TGCAAAGCATCAAAAGCATA+AGG | 0.512262 | 2.2:-60431883 | None:intergenic |
TGATGCTTTGCAGCAAGAGT+TGG | 0.512354 | 2.2:+60431894 | MS.gene003114:CDS |
CATTACCCCTTATGTTGGAA+TGG | 0.512394 | 2.2:+60429941 | MS.gene003114:CDS |
CTTTGTGCAAAATCGGAAGA+AGG | 0.512580 | 2.2:+60430442 | MS.gene003114:CDS |
AGGTCAGATAGAATTGTTTG+TGG | 0.513189 | 2.2:-60430924 | None:intergenic |
AATCATCGGGAATATTATGC+AGG | 0.520423 | 2.2:+60432055 | MS.gene003114:CDS |
CAATGGCTTCAAAAGACGTA+TGG | 0.527901 | 2.2:+60429790 | None:intergenic |
CATCTTTAAGTCCGGGGTCA+AGG | 0.529096 | 2.2:-60430944 | None:intergenic |
GTTTGCCCCGGTTAAGAGGA+AGG | 0.530147 | 2.2:+60430103 | MS.gene003114:CDS |
GCTTGTAAACGCCTAATTGA+GGG | 0.531080 | 2.2:-60430055 | None:intergenic |
GGAATGACGTGTTTAGTCTC+AGG | 0.531762 | 2.2:-60430984 | None:intergenic |
GAGGGTGATGATTCTGATGA+AGG | 0.535697 | 2.2:+60429864 | MS.gene003114:CDS |
TTCAGAATCATCAATTACAA+AGG | 0.545164 | 2.2:+60432248 | MS.gene003114:CDS |
GTGTTTCTCCGGTTCATGAA+AGG | 0.545182 | 2.2:+60430894 | MS.gene003114:CDS |
ACTTACTAGAATTCTTAATG+AGG | 0.548103 | 2.2:+60432308 | MS.gene003114:CDS |
GCTACATCTGAGCTGTATAA+CGG | 0.548265 | 2.2:+60431934 | MS.gene003114:CDS |
GATAGGAAATCAGTGAGGTG+TGG | 0.551495 | 2.2:+60430146 | MS.gene003114:CDS |
ACCGATGGGGTCGAGACCGA+TGG | 0.554843 | 2.2:+60432348 | MS.gene003114:CDS |
GAGATATGTCTAAGACCGAT+GGG | 0.555361 | 2.2:+60432334 | MS.gene003114:CDS |
AGAAGGTTGAAAATATAGCT+TGG | 0.556814 | 2.2:+60430594 | MS.gene003114:CDS |
AGAGATATGTCTAAGACCGA+TGG | 0.562467 | 2.2:+60432333 | MS.gene003114:CDS |
AAATAACCTCTCACATAGGA+TGG | 0.565070 | 2.2:-60431215 | None:intergenic |
GAAGGTTATTCAGGAGAATG+AGG | 0.565443 | 2.2:+60430460 | MS.gene003114:CDS |
ATTCATGCTGCAAACTCCAT+CGG | 0.569005 | 2.2:-60432364 | None:intergenic |
ATTCTATCTGACCTTGACCC+CGG | 0.577694 | 2.2:+60430933 | MS.gene003114:CDS |
ACAAATACTCTGCTCTTGCA+AGG | 0.578215 | 2.2:+60432026 | MS.gene003114:CDS |
TACCATGGATGAGAATGAGA+AGG | 0.581496 | 2.2:+60430577 | MS.gene003114:CDS |
CTTTCTTGGAAAGGGATGTG+AGG | 0.596394 | 2.2:+60430417 | MS.gene003114:CDS |
TGAGTCTCCTTATGTGATTG+AGG | 0.600028 | 2.2:-60431802 | None:intergenic |
GAGGAATAAGGCATTGAATG+TGG | 0.601090 | 2.2:-60431081 | None:intergenic |
TACCAATTGAAGAGCATGCG+CGG | 0.607691 | 2.2:+60431848 | MS.gene003114:CDS |
TAATGGCATCTTTAAGTCCG+GGG | 0.609613 | 2.2:-60430950 | None:intergenic |
GATTTAAATTCGGCATAACG+AGG | 0.612578 | 2.2:-60431059 | None:intergenic |
GTCTAAGGAGGTTGTTGACG+GGG | 0.619389 | 2.2:+60430190 | MS.gene003114:CDS |
AAACACCATTCCAACATAAG+GGG | 0.620023 | 2.2:-60429946 | None:intergenic |
CGGAAACAACAATGTCCTTG+TGG | 0.620981 | 2.2:+60429816 | MS.gene003114:CDS |
AAGCTGGGTTTCCGGTACAC+CGG | 0.621789 | 2.2:+60430345 | MS.gene003114:CDS |
GGTTAAGAGGAAGGCAAATG+GGG | 0.628905 | 2.2:+60430112 | MS.gene003114:CDS |
TCGGCATAACGAGGCCCAAG+AGG | 0.630511 | 2.2:-60431050 | None:intergenic |
TGGTTTGGTATCAATAGTTG+TGG | 0.630835 | 2.2:+60430716 | MS.gene003114:CDS |
TCCATCGGTCTCGACCCCAT+CGG | 0.633244 | 2.2:-60432349 | None:intergenic |
TGGAGTTTGCAGCATGAATG+TGG | 0.649735 | 2.2:+60432368 | MS.gene003114:CDS |
TAAAATGTATCTGTCTAAGG+AGG | 0.650992 | 2.2:+60430178 | MS.gene003114:CDS |
TTGTTGACGGGGTTTCACAG+TGG | 0.656963 | 2.2:+60430201 | MS.gene003114:CDS |
ATTTGCCTTCCTCTTAACCG+GGG | 0.662005 | 2.2:-60430108 | None:intergenic |
TGGGCACCATCCTATGTGAG+AGG | 0.663195 | 2.2:+60431209 | MS.gene003114:CDS |
TTGTTTAGAATATTCCACAC+CGG | 0.665129 | 2.2:-60431005 | None:intergenic |
CCGAGAACGATCTTTAAACG+TGG | 0.667057 | 2.2:+60432149 | MS.gene003114:CDS |
GGTGTGGAATATTCTAAACA+AGG | 0.670977 | 2.2:+60431007 | MS.gene003114:CDS |
AATGCCCATGAAAATGATTG+TGG | 0.675484 | 2.2:-60430782 | None:intergenic |
TGCTTATCGGAAGATTCATG+AGG | 0.681046 | 2.2:+60430292 | MS.gene003114:CDS |
AGAACGATCTTTAAACGTGG+AGG | 0.689325 | 2.2:+60432152 | MS.gene003114:CDS |
CTTGAAAAGGGAATTCAAGG+TGG | 0.689739 | 2.2:+60430386 | MS.gene003114:CDS |
AAGTGTTACATTACAAACGA+GGG | 0.690032 | 2.2:+60429846 | MS.gene003114:CDS |
ATTCCTCATCGAGAAAACAG+AGG | 0.705269 | 2.2:+60431097 | MS.gene003114:CDS |
TAACACTTCCAATCTCCACA+AGG | 0.707021 | 2.2:-60429831 | None:intergenic |
GAAGTGTTACATTACAAACG+AGG | 0.716498 | 2.2:+60429845 | MS.gene003114:CDS |
CTAAACACGTCATTCCGGTG+TGG | 0.723440 | 2.2:+60430991 | MS.gene003114:CDS |
AGATATGTCTAAGACCGATG+GGG | 0.747503 | 2.2:+60432335 | MS.gene003114:CDS |
ATAGAGATAGGAAATCAGTG+AGG | 0.812534 | 2.2:+60430141 | MS.gene003114:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTCACAATTCATAAAAT+AGG | + | chr2.2:60431662-60431681 | MS.gene003114:intron | 15.0% |
!! | ATAATTCATTAGAATGCATT+GGG | - | chr2.2:60431480-60431499 | None:intergenic | 20.0% |
!! | ATTGAATGTGGATTTAAATT+CGG | - | chr2.2:60431072-60431091 | None:intergenic | 20.0% |
!! | ATTTCTTAGCAATAAAACTT+TGG | - | chr2.2:60432191-60432210 | None:intergenic | 20.0% |
!!! | AAAGTTTTATTGCTAAGAAA+TGG | + | chr2.2:60432190-60432209 | MS.gene003114:CDS | 20.0% |
!!! | ACATATTGATTTACTGTATT+CGG | + | chr2.2:60431175-60431194 | MS.gene003114:CDS | 20.0% |
!!! | GTCATTTTTATTGTATCTTA+CGG | + | chr2.2:60431625-60431644 | MS.gene003114:intron | 20.0% |
!!! | TGAAAATAAATTTTCAGCTT+GGG | - | chr2.2:60432232-60432251 | None:intergenic | 20.0% |
! | AAAAGATTGACTATACAATG+TGG | - | chr2.2:60431547-60431566 | None:intergenic | 25.0% |
! | ACAAATACTACTTAAGTAGA+TGG | + | chr2.2:60432124-60432143 | MS.gene003114:CDS | 25.0% |
! | ACTTACTAGAATTCTTAATG+AGG | + | chr2.2:60432308-60432327 | MS.gene003114:CDS | 25.0% |
! | CATAAGAGGAATATTTATGA+AGG | - | chr2.2:60430854-60430873 | None:intergenic | 25.0% |
! | CATAATTCATTAGAATGCAT+TGG | - | chr2.2:60431481-60431500 | None:intergenic | 25.0% |
! | TAAAACACAACCGAAAAAAA+TGG | - | chr2.2:60430747-60430766 | None:intergenic | 25.0% |
! | TCTACTTAAGTAGTATTTGT+CGG | - | chr2.2:60432124-60432143 | None:intergenic | 25.0% |
! | TTCAGAATCATCAATTACAA+AGG | + | chr2.2:60432248-60432267 | MS.gene003114:CDS | 25.0% |
!! | ATTACTTATGGATTCCTTTT+TGG | + | chr2.2:60430689-60430708 | MS.gene003114:CDS | 25.0% |
!! | CTGAAAATAAATTTTCAGCT+TGG | - | chr2.2:60432233-60432252 | None:intergenic | 25.0% |
!!! | CTTTGTTTATGATTTTACCA+TGG | + | chr2.2:60430562-60430581 | MS.gene003114:CDS | 25.0% |
!!! | TCTTTGTTTTGTATGGTTTT+CGG | + | chr2.2:60431378-60431397 | MS.gene003114:intron | 25.0% |
AAAATGCTTGAGCTTGAAAA+GGG | + | chr2.2:60430374-60430393 | MS.gene003114:CDS | 30.0% | |
AAGTGTTACATTACAAACGA+GGG | + | chr2.2:60429846-60429865 | MS.gene003114:CDS | 30.0% | |
ACATTTGTCTTTCTTGGAAA+GGG | + | chr2.2:60430409-60430428 | MS.gene003114:CDS | 30.0% | |
AGAAGGTTGAAAATATAGCT+TGG | + | chr2.2:60430594-60430613 | MS.gene003114:CDS | 30.0% | |
ATCAAGTTCCAAATCTGAAA+TGG | - | chr2.2:60431692-60431711 | None:intergenic | 30.0% | |
CAAAAAATAACCTCTCACAT+AGG | - | chr2.2:60431222-60431241 | None:intergenic | 30.0% | |
CAATGTACAAATCTTAGAAC+TGG | + | chr2.2:60431823-60431842 | MS.gene003114:CDS | 30.0% | |
CAGAGGAATTTGAACTTAAA+TGG | + | chr2.2:60431114-60431133 | MS.gene003114:CDS | 30.0% | |
CTACTTAAGTAGTATTTGTC+GGG | - | chr2.2:60432123-60432142 | None:intergenic | 30.0% | |
GAAAATATAGCTTGGTCATA+TGG | + | chr2.2:60430602-60430621 | MS.gene003114:CDS | 30.0% | |
GTTAATAAGAATGTCGTGTT+TGG | + | chr2.2:60430632-60430651 | MS.gene003114:CDS | 30.0% | |
TAAAATGTATCTGTCTAAGG+AGG | + | chr2.2:60430178-60430197 | MS.gene003114:CDS | 30.0% | |
TAAACACCATTCCAACATAA+GGG | - | chr2.2:60429950-60429969 | None:intergenic | 30.0% | |
TAGGTATTCCATTTCAGATT+TGG | + | chr2.2:60431681-60431700 | MS.gene003114:intron | 30.0% | |
TATGAATCACCACTTAAACT+TGG | + | chr2.2:60431497-60431516 | MS.gene003114:intron | 30.0% | |
TCTTATCGATCGATTACTTA+TGG | + | chr2.2:60430677-60430696 | MS.gene003114:CDS | 30.0% | |
TGCTAAAATGTATCTGTCTA+AGG | + | chr2.2:60430175-60430194 | MS.gene003114:CDS | 30.0% | |
TTAAACACCATTCCAACATA+AGG | - | chr2.2:60429951-60429970 | None:intergenic | 30.0% | |
TTGCAAGGAATTTGAATCAT+CGG | + | chr2.2:60432041-60432060 | MS.gene003114:CDS | 30.0% | |
! | AAACACCACAATCATTTTCA+TGG | + | chr2.2:60430777-60430796 | MS.gene003114:CDS | 30.0% |
! | AACACCACAATCATTTTCAT+GGG | + | chr2.2:60430778-60430797 | MS.gene003114:CDS | 30.0% |
! | GAAAAGGGAAAATGATGTTT+TGG | + | chr2.2:60430496-60430515 | MS.gene003114:CDS | 30.0% |
! | TTCTAAACAAGGTATCTAGT+TGG | + | chr2.2:60431018-60431037 | MS.gene003114:CDS | 30.0% |
! | TTGTTTAGAATATTCCACAC+CGG | - | chr2.2:60431008-60431027 | None:intergenic | 30.0% |
! | TTTTCATCCTCAATCACATA+AGG | + | chr2.2:60431795-60431814 | MS.gene003114:CDS | 30.0% |
!! | CATAAAAGCATCTATAGACT+TGG | - | chr2.2:60431270-60431289 | None:intergenic | 30.0% |
!!! | ATTTTGTTTGTTATCGATCC+GGG | + | chr2.2:60430081-60430100 | MS.gene003114:CDS | 30.0% |
!!! | CTATGTGAGAGGTTATTTTT+TGG | + | chr2.2:60431220-60431239 | MS.gene003114:CDS | 30.0% |
!!! | GATTTTGTTTGTTATCGATC+CGG | + | chr2.2:60430080-60430099 | MS.gene003114:CDS | 30.0% |
AAACACCATTCCAACATAAG+GGG | - | chr2.2:60429949-60429968 | None:intergenic | 35.0% | |
AAATAACCTCTCACATAGGA+TGG | - | chr2.2:60431218-60431237 | None:intergenic | 35.0% | |
AAATCGGAAGAAGGTTATTC+AGG | + | chr2.2:60430451-60430470 | MS.gene003114:CDS | 35.0% | |
AATCATCGGGAATATTATGC+AGG | + | chr2.2:60432055-60432074 | MS.gene003114:CDS | 35.0% | |
AATGCCCATGAAAATGATTG+TGG | - | chr2.2:60430785-60430804 | None:intergenic | 35.0% | |
ACAGAAATGTCATAAGAGCA+TGG | - | chr2.2:60431722-60431741 | None:intergenic | 35.0% | |
AGGTCAGATAGAATTGTTTG+TGG | - | chr2.2:60430927-60430946 | None:intergenic | 35.0% | |
ATAGAGATAGGAAATCAGTG+AGG | + | chr2.2:60430141-60430160 | MS.gene003114:CDS | 35.0% | |
CGAGGAATAATCATCATAAG+AGG | - | chr2.2:60430868-60430887 | None:intergenic | 35.0% | |
CTCAGGAAATTCACTTCTAA+TGG | - | chr2.2:60430970-60430989 | None:intergenic | 35.0% | |
CTTCAAAAGACGTATGGATT+CGG | + | chr2.2:60429796-60429815 | MS.gene003114:CDS | 35.0% | |
GAAAATGCTTGAGCTTGAAA+AGG | + | chr2.2:60430373-60430392 | MS.gene003114:CDS | 35.0% | |
GACATTTGTCTTTCTTGGAA+AGG | + | chr2.2:60430408-60430427 | MS.gene003114:CDS | 35.0% | |
GATATCATTACCCCTTATGT+TGG | + | chr2.2:60429936-60429955 | MS.gene003114:CDS | 35.0% | |
GATTTAAATTCGGCATAACG+AGG | - | chr2.2:60431062-60431081 | None:intergenic | 35.0% | |
GGCATTGCTTAATGAGAAAA+GGG | + | chr2.2:60430481-60430500 | MS.gene003114:CDS | 35.0% | |
GGTGTGGAATATTCTAAACA+AGG | + | chr2.2:60431007-60431026 | MS.gene003114:CDS | 35.0% | |
GTCCAAAATCAGAAACCATT+TGG | - | chr2.2:60431142-60431161 | None:intergenic | 35.0% | |
GTTCTTTCATCAGTTCTTTG+CGG | - | chr2.2:60432290-60432309 | None:intergenic | 35.0% | |
TACAACAGTATCCATGAGAA+GGG | - | chr2.2:60431757-60431776 | None:intergenic | 35.0% | |
TCTAATGGCATCTTTAAGTC+CGG | - | chr2.2:60430955-60430974 | None:intergenic | 35.0% | |
TGAACTTAAATGGAGCCAAA+TGG | + | chr2.2:60431124-60431143 | MS.gene003114:CDS | 35.0% | |
TGAGGAACTTTGTGCAAAAT+CGG | + | chr2.2:60430435-60430454 | MS.gene003114:CDS | 35.0% | |
TGCAAGGAATTTGAATCATC+GGG | + | chr2.2:60432042-60432061 | MS.gene003114:CDS | 35.0% | |
TGTACGACACTTCAAAAAGT+TGG | + | chr2.2:60431966-60431985 | MS.gene003114:CDS | 35.0% | |
TTCTTTCATCAGTTCTTTGC+GGG | - | chr2.2:60432289-60432308 | None:intergenic | 35.0% | |
! | AGCCAAATGGTTTCTGATTT+TGG | + | chr2.2:60431137-60431156 | MS.gene003114:CDS | 35.0% |
! | AGGCATTGCTTAATGAGAAA+AGG | + | chr2.2:60430480-60430499 | MS.gene003114:CDS | 35.0% |
! | ATCATTTTCATGGGCATTAC+AGG | + | chr2.2:60430787-60430806 | MS.gene003114:CDS | 35.0% |
! | ATGGTTTCTGATTTTGGACT+TGG | + | chr2.2:60431143-60431162 | MS.gene003114:CDS | 35.0% |
! | GAAGTGTTACATTACAAACG+AGG | + | chr2.2:60429845-60429864 | MS.gene003114:CDS | 35.0% |
! | GATGATGCTTTTGAGCATTA+TGG | + | chr2.2:60429978-60429997 | MS.gene003114:CDS | 35.0% |
! | TCTAGAATTAGCCCTCAATT+AGG | + | chr2.2:60430044-60430063 | MS.gene003114:CDS | 35.0% |
! | TGCAAAGCATCAAAAGCATA+AGG | - | chr2.2:60431886-60431905 | None:intergenic | 35.0% |
! | TGTTTTCTCGATGAGGAATA+AGG | - | chr2.2:60431096-60431115 | None:intergenic | 35.0% |
!! | CAGAGTATTTGTTCCTTTTC+TGG | - | chr2.2:60432018-60432037 | None:intergenic | 35.0% |
!! | TGGTTTGGTATCAATAGTTG+TGG | + | chr2.2:60430716-60430735 | MS.gene003114:CDS | 35.0% |
!! | TTTCGGTTGTGTTTTATTGC+AGG | + | chr2.2:60430751-60430770 | MS.gene003114:CDS | 35.0% |
!!! | GCTTTTTTGAACAGGTATGT+TGG | + | chr2.2:60431324-60431343 | MS.gene003114:intron | 35.0% |
!!! | TGCTTGCTCTTTGTTTTGTA+TGG | + | chr2.2:60431371-60431390 | MS.gene003114:intron | 35.0% |
!!! | TGTGGCAGAACCATTTTTTT+CGG | + | chr2.2:60430734-60430753 | MS.gene003114:CDS | 35.0% |
!!! | TTTGCGTAGCTTTTTTGAAC+AGG | + | chr2.2:60431316-60431335 | MS.gene003114:CDS | 35.0% |
AACAATGTCCTTGTGGAGAT+TGG | + | chr2.2:60429823-60429842 | MS.gene003114:CDS | 40.0% | |
AACCTTCTCATTCTCATCCA+TGG | - | chr2.2:60430582-60430601 | None:intergenic | 40.0% | |
ACAAATACTCTGCTCTTGCA+AGG | + | chr2.2:60432026-60432045 | MS.gene003114:CDS | 40.0% | |
AGAACGATCTTTAAACGTGG+AGG | + | chr2.2:60432152-60432171 | MS.gene003114:CDS | 40.0% | |
AGGTGGACATTTGTCTTTCT+TGG | + | chr2.2:60430403-60430422 | MS.gene003114:CDS | 40.0% | |
ATACTCTTGCTTTCGAAAGC+TGG | + | chr2.2:60430329-60430348 | MS.gene003114:CDS | 40.0% | |
ATTCATGCTGCAAACTCCAT+CGG | - | chr2.2:60432367-60432386 | None:intergenic | 40.0% | |
ATTCCTCATCGAGAAAACAG+AGG | + | chr2.2:60431097-60431116 | MS.gene003114:CDS | 40.0% | |
CAATGTGGACAACACAAAAG+TGG | - | chr2.2:60431532-60431551 | None:intergenic | 40.0% | |
CATTACCCCTTATGTTGGAA+TGG | + | chr2.2:60429941-60429960 | MS.gene003114:CDS | 40.0% | |
CCACGTTTAAAGATCGTTCT+CGG | - | chr2.2:60432152-60432171 | None:intergenic | 40.0% | |
CGACACTTCAAAAAGTTGGA+TGG | + | chr2.2:60431970-60431989 | MS.gene003114:CDS | 40.0% | |
CTAATGGCATCTTTAAGTCC+GGG | - | chr2.2:60430954-60430973 | None:intergenic | 40.0% | |
CTACAACAGTATCCATGAGA+AGG | - | chr2.2:60431758-60431777 | None:intergenic | 40.0% | |
CTTCTCATGGATACTGTTGT+AGG | + | chr2.2:60431756-60431775 | MS.gene003114:intron | 40.0% | |
CTTGAAAAGGGAATTCAAGG+TGG | + | chr2.2:60430386-60430405 | MS.gene003114:CDS | 40.0% | |
CTTTGTGCAAAATCGGAAGA+AGG | + | chr2.2:60430442-60430461 | MS.gene003114:CDS | 40.0% | |
GAAGGTTATTCAGGAGAATG+AGG | + | chr2.2:60430460-60430479 | MS.gene003114:CDS | 40.0% | |
GACATCTTCCTTTCATGAAC+CGG | - | chr2.2:60430905-60430924 | None:intergenic | 40.0% | |
GAGCTTGAAAAGGGAATTCA+AGG | + | chr2.2:60430383-60430402 | MS.gene003114:CDS | 40.0% | |
GCTACATCTGAGCTGTATAA+CGG | + | chr2.2:60431934-60431953 | MS.gene003114:CDS | 40.0% | |
GCTTGTAAACGCCTAATTGA+GGG | - | chr2.2:60430058-60430077 | None:intergenic | 40.0% | |
TAACACTTCCAATCTCCACA+AGG | - | chr2.2:60429834-60429853 | None:intergenic | 40.0% | |
TAATGGCATCTTTAAGTCCG+GGG | - | chr2.2:60430953-60430972 | None:intergenic | 40.0% | |
TACCAAACCACACTCCAAAA+AGG | - | chr2.2:60430706-60430725 | None:intergenic | 40.0% | |
TACCATGGATGAGAATGAGA+AGG | + | chr2.2:60430577-60430596 | MS.gene003114:CDS | 40.0% | |
TACTCTTGCTTTCGAAAGCT+GGG | + | chr2.2:60430330-60430349 | MS.gene003114:CDS | 40.0% | |
TCATGAATCTTCCGATAAGC+AGG | - | chr2.2:60430293-60430312 | None:intergenic | 40.0% | |
TCATGGATACTGTTGTAGGT+TGG | + | chr2.2:60431760-60431779 | MS.gene003114:intron | 40.0% | |
TCTAGATCTTGCTTTCCTCA+TGG | - | chr2.2:60430030-60430049 | None:intergenic | 40.0% | |
TGAGACTAAACACGTCATTC+CGG | + | chr2.2:60430986-60431005 | MS.gene003114:CDS | 40.0% | |
TGAGTCTCCTTATGTGATTG+AGG | - | chr2.2:60431805-60431824 | None:intergenic | 40.0% | |
TGATGATTATTCCTCGATGC+AGG | + | chr2.2:60430872-60430891 | MS.gene003114:intron | 40.0% | |
TGCTTATCGGAAGATTCATG+AGG | + | chr2.2:60430292-60430311 | MS.gene003114:CDS | 40.0% | |
! | AGAGATATGTCTAAGACCGA+TGG | + | chr2.2:60432333-60432352 | MS.gene003114:CDS | 40.0% |
! | AGATATGTCTAAGACCGATG+GGG | + | chr2.2:60432335-60432354 | MS.gene003114:CDS | 40.0% |
! | ATTCCTCTGTTTTCTCGATG+AGG | - | chr2.2:60431103-60431122 | None:intergenic | 40.0% |
! | ATTTTCACTATCCGGTGTAC+CGG | - | chr2.2:60430359-60430378 | None:intergenic | 40.0% |
! | GAGATATGTCTAAGACCGAT+GGG | + | chr2.2:60432334-60432353 | MS.gene003114:CDS | 40.0% |
! | GCTCAAGCATTTTCACTATC+CGG | - | chr2.2:60430367-60430386 | None:intergenic | 40.0% |
! | GGCAATTTTGCTAGAAAGCA+TGG | + | chr2.2:60429999-60430018 | MS.gene003114:CDS | 40.0% |
! | GTATTCGGTTCGAGCATATT+GGG | + | chr2.2:60431190-60431209 | MS.gene003114:CDS | 40.0% |
! | TGCGTCTTTTACCTGCTTAT+CGG | + | chr2.2:60430279-60430298 | MS.gene003114:CDS | 40.0% |
! | TGTATTCGGTTCGAGCATAT+TGG | + | chr2.2:60431189-60431208 | MS.gene003114:CDS | 40.0% |
! | TTTCTGTTTCTCCCTTCTCA+TGG | + | chr2.2:60431743-60431762 | MS.gene003114:intron | 40.0% |
!! | GAAAGCATGGATTTTCCATG+AGG | + | chr2.2:60430012-60430031 | MS.gene003114:CDS | 40.0% |
!! | GAGGAATAAGGCATTGAATG+TGG | - | chr2.2:60431084-60431103 | None:intergenic | 40.0% |
!! | TTATCTGCTTTCACCGATTC+TGG | - | chr2.2:60429900-60429919 | None:intergenic | 40.0% |
!!! | AGTTGGTTTTGTCTTCCTCT+TGG | + | chr2.2:60431035-60431054 | MS.gene003114:CDS | 40.0% |
!!! | ATGGATTCCTTTTTGGAGTG+TGG | + | chr2.2:60430696-60430715 | MS.gene003114:CDS | 40.0% |
!!! | GTTGGTTTTGTCTTCCTCTT+GGG | + | chr2.2:60431036-60431055 | MS.gene003114:CDS | 40.0% |
!!! | TTCCTTTTTGGAGTGTGGTT+TGG | + | chr2.2:60430701-60430720 | MS.gene003114:CDS | 40.0% |
ATTCTATCTGACCTTGACCC+CGG | + | chr2.2:60430933-60430952 | MS.gene003114:CDS | 45.0% | |
ATTTGCCTTCCTCTTAACCG+GGG | - | chr2.2:60430111-60430130 | None:intergenic | 45.0% | |
CATTTGCCTTCCTCTTAACC+GGG | - | chr2.2:60430112-60430131 | None:intergenic | 45.0% | |
CCATTTGCCTTCCTCTTAAC+CGG | - | chr2.2:60430113-60430132 | None:intergenic | 45.0% | |
CCGAGAACGATCTTTAAACG+TGG | + | chr2.2:60432149-60432168 | MS.gene003114:CDS | 45.0% | |
CGCTTGTAAACGCCTAATTG+AGG | - | chr2.2:60430059-60430078 | None:intergenic | 45.0% | |
CGGAAACAACAATGTCCTTG+TGG | + | chr2.2:60429816-60429835 | MS.gene003114:CDS | 45.0% | |
CGGTTAAGAGGAAGGCAAAT+GGG | + | chr2.2:60430111-60430130 | MS.gene003114:CDS | 45.0% | |
CGTGTTATGGCTACCAGAAA+AGG | + | chr2.2:60432002-60432021 | MS.gene003114:CDS | 45.0% | |
CTGTCTAAGGAGGTTGTTGA+CGG | + | chr2.2:60430188-60430207 | MS.gene003114:CDS | 45.0% | |
CTTTCTTGGAAAGGGATGTG+AGG | + | chr2.2:60430417-60430436 | MS.gene003114:CDS | 45.0% | |
GAGGGTGATGATTCTGATGA+AGG | + | chr2.2:60429864-60429883 | MS.gene003114:CDS | 45.0% | |
GATAGGAAATCAGTGAGGTG+TGG | + | chr2.2:60430146-60430165 | MS.gene003114:CDS | 45.0% | |
GGAATGACGTGTTTAGTCTC+AGG | - | chr2.2:60430987-60431006 | None:intergenic | 45.0% | |
GGTTAAGAGGAAGGCAAATG+GGG | + | chr2.2:60430112-60430131 | MS.gene003114:CDS | 45.0% | |
GTCATCATCTGCTTCTTTCG+TGG | - | chr2.2:60430543-60430562 | None:intergenic | 45.0% | |
GTGGACAACACAAAAGTGGT+TGG | - | chr2.2:60431528-60431547 | None:intergenic | 45.0% | |
GTGTTTCTCCGGTTCATGAA+AGG | + | chr2.2:60430894-60430913 | MS.gene003114:CDS | 45.0% | |
TGATGCTTTGCAGCAAGAGT+TGG | + | chr2.2:60431894-60431913 | MS.gene003114:CDS | 45.0% | |
TGGAGTTTGCAGCATGAATG+TGG | + | chr2.2:60432368-60432387 | MS.gene003114:CDS | 45.0% | |
TGTCTAAGGAGGTTGTTGAC+GGG | + | chr2.2:60430189-60430208 | MS.gene003114:CDS | 45.0% | |
TTGGCGTCACCAAGTTTAAG+TGG | - | chr2.2:60431509-60431528 | None:intergenic | 45.0% | |
! | CGTGCATAATCACGAGCTTT+TGG | + | chr2.2:60430244-60430263 | MS.gene003114:CDS | 45.0% |
! | TACCAATTGAAGAGCATGCG+CGG | + | chr2.2:60431848-60431867 | MS.gene003114:CDS | 45.0% |
!! | ATGGGGAGCATCATAGAGAT+AGG | + | chr2.2:60430129-60430148 | MS.gene003114:CDS | 45.0% |
AGGTTCTGCAGCACCAGAAT+CGG | + | chr2.2:60429884-60429903 | MS.gene003114:CDS | 50.0% | |
ATGGAGAGCGACACGTGTTA+TGG | + | chr2.2:60431989-60432008 | MS.gene003114:CDS | 50.0% | |
CATCTTTAAGTCCGGGGTCA+AGG | - | chr2.2:60430947-60430966 | None:intergenic | 50.0% | |
CCGGTTAAGAGGAAGGCAAA+TGG | + | chr2.2:60430110-60430129 | MS.gene003114:CDS | 50.0% | |
CTAAACACGTCATTCCGGTG+TGG | + | chr2.2:60430991-60431010 | MS.gene003114:CDS | 50.0% | |
GCTTTCGAAAGCTGGGTTTC+CGG | + | chr2.2:60430337-60430356 | MS.gene003114:CDS | 50.0% | |
GTCTAAGGAGGTTGTTGACG+GGG | + | chr2.2:60430190-60430209 | MS.gene003114:CDS | 50.0% | |
TTGTTGACGGGGTTTCACAG+TGG | + | chr2.2:60430201-60430220 | MS.gene003114:CDS | 50.0% | |
AAGCTGGGTTTCCGGTACAC+CGG | + | chr2.2:60430345-60430364 | MS.gene003114:CDS | 55.0% | |
CCTCGATGCAGGTGTTTCTC+CGG | + | chr2.2:60430883-60430902 | MS.gene003114:intron | 55.0% | |
CTCCGCGCATGCTCTTCAAT+TGG | - | chr2.2:60431853-60431872 | None:intergenic | 55.0% | |
GTTTGCCCCGGTTAAGAGGA+AGG | + | chr2.2:60430103-60430122 | MS.gene003114:CDS | 55.0% | |
TGGGCACCATCCTATGTGAG+AGG | + | chr2.2:60431209-60431228 | MS.gene003114:CDS | 55.0% | |
TTATCGATCCGGGTTTGCCC+CGG | + | chr2.2:60430091-60430110 | MS.gene003114:CDS | 55.0% | |
CCGGAGAAACACCTGCATCG+AGG | - | chr2.2:60430886-60430905 | None:intergenic | 60.0% | |
CCTCTTAACCGGGGCAAACC+CGG | - | chr2.2:60430102-60430121 | None:intergenic | 60.0% | |
TCCATCGGTCTCGACCCCAT+CGG | - | chr2.2:60432352-60432371 | None:intergenic | 60.0% | |
TCGGCATAACGAGGCCCAAG+AGG | - | chr2.2:60431053-60431072 | None:intergenic | 60.0% | |
ACCGATGGGGTCGAGACCGA+TGG | + | chr2.2:60432348-60432367 | MS.gene003114:CDS | 65.0% | |
CCGGGTTTGCCCCGGTTAAG+AGG | + | chr2.2:60430099-60430118 | MS.gene003114:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 60429792 | 60432410 | 60429792 | ID=MS.gene003114 |
chr2.2 | mRNA | 60429792 | 60432410 | 60429792 | ID=MS.gene003114.t1;Parent=MS.gene003114 |
chr2.2 | exon | 60429792 | 60430808 | 60429792 | ID=MS.gene003114.t1.exon1;Parent=MS.gene003114.t1 |
chr2.2 | CDS | 60429792 | 60430808 | 60429792 | ID=cds.MS.gene003114.t1;Parent=MS.gene003114.t1 |
chr2.2 | exon | 60430894 | 60431337 | 60430894 | ID=MS.gene003114.t1.exon2;Parent=MS.gene003114.t1 |
chr2.2 | CDS | 60430894 | 60431337 | 60430894 | ID=cds.MS.gene003114.t1;Parent=MS.gene003114.t1 |
chr2.2 | exon | 60431778 | 60432410 | 60431778 | ID=MS.gene003114.t1.exon3;Parent=MS.gene003114.t1 |
chr2.2 | CDS | 60431778 | 60432410 | 60431778 | ID=cds.MS.gene003114.t1;Parent=MS.gene003114.t1 |
Gene Sequence |
Protein sequence |