AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003232

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003232.t1 MTR_2g028950 97.963 589 10 1 1 587 1 589 0.0 1179
MS.gene003232.t1 MTR_2g028950 98.008 502 8 1 1 500 1 502 0.0 1008
MS.gene003232.t1 MTR_5g090770 59.206 554 214 4 21 567 23 571 0.0 667
MS.gene003232.t1 MTR_5g090770 60.095 421 159 3 21 434 23 441 1.05e-176 508
MS.gene003232.t1 MTR_2g039880 44.112 569 280 12 9 564 15 558 2.22e-141 422
MS.gene003232.t1 MTR_7g090020 34.545 385 223 10 42 401 6 386 1.42e-46 171
MS.gene003232.t1 MTR_1g051025 32.812 384 230 9 42 401 6 385 2.13e-44 165
MS.gene003232.t1 MTR_3g102610 52.542 118 20 3 187 302 40 123 3.31e-23 95.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003232.t1 AT5G45110 62.039 569 195 7 1 559 1 558 0.0 676
MS.gene003232.t1 AT4G19660 60.406 591 199 11 2 580 3 570 0.0 647
MS.gene003232.t1 AT4G19660 57.767 618 199 12 2 580 3 597 0.0 632
MS.gene003232.t1 AT5G45110 60.762 525 186 7 1 519 1 511 0.0 605
MS.gene003232.t1 AT1G64280 40.602 532 298 7 39 562 42 563 1.35e-125 382
MS.gene003232.t1 AT4G26120 40.700 543 300 10 39 573 45 573 1.42e-123 377
MS.gene003232.t1 AT4G26120 40.700 543 300 10 39 573 44 572 1.49e-123 377
MS.gene003232.t1 AT3G57130 33.858 381 227 8 42 401 8 384 3.11e-50 180
MS.gene003232.t1 AT2G41370 33.756 394 227 10 37 401 3 391 4.81e-47 172
MS.gene003232.t1 AT3G57130 30.769 156 98 3 42 188 8 162 2.06e-16 78.2

Find 135 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGACTCTTTGCTCTTCT+TGG 0.133695 2.1:-62143877 None:intergenic
TGCAATGTCCATGGCTAATT+TGG 0.171363 2.1:-62143356 None:intergenic
GAACAAGCTGAGTTCTAATT+TGG 0.195265 2.1:+62139981 MS.gene003232:CDS
ATTGATTCTGATTATGATTA+TGG 0.207555 2.1:+62140015 MS.gene003232:CDS
AAAACAAGAGACTTATTTCT+AGG 0.255152 2.1:+62143476 MS.gene003232:CDS
TACCCCTCTTAAATATTTCA+TGG 0.278681 2.1:-62140113 None:intergenic
AAGGTTGTTTCTGAAGTTCT+TGG 0.286176 2.1:+62141559 MS.gene003232:CDS
ATCCGAGTTTGCTGGTCTTT+CGG 0.306284 2.1:+62143393 MS.gene003232:CDS
CTTGACTCTTTGCTCTTCTT+GGG 0.320433 2.1:-62143876 None:intergenic
TCGAGCACTTCCGAGCAATT+AGG 0.321539 2.1:-62143803 None:intergenic
TCTCAAAATAATGGCTAATT+CGG 0.322919 2.1:+62139843 None:intergenic
TTTAAGAGGGGTAAAGATAA+AGG 0.330980 2.1:+62140123 MS.gene003232:CDS
TGAAGTTCTTGGATTGGGTT+TGG 0.339158 2.1:+62141570 MS.gene003232:CDS
AGACGTCTTCTTAACTTTGT+AGG 0.350294 2.1:+62141178 MS.gene003232:CDS
TGTAACATACAGACTCTCTA+AGG 0.352554 2.1:-62144003 None:intergenic
GTTTCTGAAGTTCTTGGATT+GGG 0.355904 2.1:+62141565 MS.gene003232:CDS
AAAATTCATCGGTGCATTCT+AGG 0.360553 2.1:+62140072 MS.gene003232:CDS
CGAGCATGATCGGAGCCATT+AGG 0.362185 2.1:-62139937 None:intergenic
AGGGCATATGTTGTGACTAA+TGG 0.365492 2.1:-62139917 None:intergenic
ATCGGTGCATTCTAGGTTCT+AGG 0.371950 2.1:+62140079 MS.gene003232:CDS
TATCATTGTGGAGGGAATTC+CGG 0.388694 2.1:+62140047 MS.gene003232:CDS
AAAGCTGAGTTTAGTCGCTC+TGG 0.402143 2.1:+62143953 MS.gene003232:CDS
TGTTTCTGAAGTTCTTGGAT+TGG 0.410365 2.1:+62141564 MS.gene003232:CDS
AATTCCCTCCACAATGATAT+CGG 0.420705 2.1:-62140043 None:intergenic
TCCACAGCAAAATTAATTGC+AGG 0.431240 2.1:-62140324 None:intergenic
TTCTCAAGGTAAAACAAATC+AGG 0.437786 2.1:-62143848 None:intergenic
TTGAGCGATTTGTTGCCTTA+TGG 0.438180 2.1:+62140180 MS.gene003232:CDS
AGTCACAACATATGCCCTAA+TGG 0.443721 2.1:+62139922 MS.gene003232:CDS
GCTCCGCCGCGACCTTCATC+AGG 0.443936 2.1:+62141363 MS.gene003232:CDS
ATGGAGGCCCTGATGAAAAC+AGG 0.445853 2.1:+62143499 MS.gene003232:CDS
GCTCTTTCTCAATTGAGATC+TGG 0.446362 2.1:-62141309 None:intergenic
GGAAGTGCTCGACAAGTTCA+TGG 0.446634 2.1:+62143814 MS.gene003232:CDS
TAGTATCGCTTCTTACGAAA+GGG 0.448428 2.1:+62141668 MS.gene003232:CDS
TCATCTTCGCACTTGTCAAA+TGG 0.450698 2.1:+62139892 MS.gene003232:CDS
GTGGTGGGTGTCAGTCGAGA+TGG 0.451143 2.1:+62143766 MS.gene003232:intron
AGAGTGCTGTTAGTATTTGT+AGG 0.451754 2.1:+62141722 MS.gene003232:CDS
GACGTCTTCTTAACTTTGTA+GGG 0.452305 2.1:+62141179 MS.gene003232:CDS
GAGACAACATCCGAGTTTGC+TGG 0.452844 2.1:+62143385 MS.gene003232:CDS
AGAACTTCAGAAACAACCTT+AGG 0.452990 2.1:-62141556 None:intergenic
TCATAACCAACTTTGCCATA+AGG 0.458550 2.1:-62140195 None:intergenic
GCTGGTCTTTCGGCATCAAA+AGG 0.459478 2.1:+62143403 MS.gene003232:CDS
AGAAGCGATACTATAATTGA+AGG 0.460936 2.1:-62141658 None:intergenic
CTCGAGGTTACGAGCATGAT+CGG 0.461902 2.1:-62139947 None:intergenic
GAGCATGATCGGAGCCATTA+GGG 0.467051 2.1:-62139936 None:intergenic
TGGTGGGTGTCAGTCGAGAT+GGG 0.469353 2.1:+62143767 MS.gene003232:intron
GTTTGGCTAATGTCAATCTT+CGG 0.472297 2.1:+62141587 MS.gene003232:CDS
AAAGGATTGTCGAAGAATGA+AGG 0.474320 2.1:+62140141 MS.gene003232:CDS
CTTTGTAGGGAAGGCTCTTG+TGG 0.482823 2.1:+62141192 MS.gene003232:CDS
TGCCACTCTGTCAACACATT+GGG 0.488312 2.1:-62141272 None:intergenic
CAAGAGACTTATTTCTAGGA+TGG 0.490241 2.1:+62143480 MS.gene003232:CDS
CTTCTTGGGTGCCCTTCTCA+AGG 0.494673 2.1:-62143862 None:intergenic
GACATTACTTTAGATGAAGC+TGG 0.496309 2.1:+62141502 MS.gene003232:CDS
AGGTTCAAACGGAAACTTAA+GGG 0.497387 2.1:+62143423 MS.gene003232:CDS
TTTCCATGAAATATTTAAGA+GGG 0.500978 2.1:+62140110 MS.gene003232:CDS
TTGTTGCCTTATGGCAAAGT+TGG 0.501023 2.1:+62140189 MS.gene003232:CDS
AAGGTTCAAACGGAAACTTA+AGG 0.501661 2.1:+62143422 MS.gene003232:CDS
AGGGACAAAGTGTCCACTAC+AGG 0.502128 2.1:-62141403 None:intergenic
AGAAATGCGAAGGAATCCTT+TGG 0.503336 2.1:+62141834 MS.gene003232:CDS
TTCTTGAGCTATGCATATAG+TGG 0.505104 2.1:+62140231 MS.gene003232:CDS
TACGAAAGGGGCTTGTGCAT+CGG 0.506556 2.1:+62141681 MS.gene003232:CDS
CAAGAACATCAATGCATATC+CGG 0.508900 2.1:-62141807 None:intergenic
TCGGCATCAAAAGGTTCAAA+CGG 0.510189 2.1:+62143412 MS.gene003232:CDS
GCATCGGATTTGACTTTCGA+TGG 0.514017 2.1:+62141697 MS.gene003232:CDS
ATAGTATCGCTTCTTACGAA+AGG 0.524638 2.1:+62141667 MS.gene003232:CDS
AAGCTGAGTTTAGTCGCTCT+GGG 0.526051 2.1:+62143954 MS.gene003232:CDS
TGCCGAAAGACCAGCAAACT+CGG 0.526961 2.1:-62143395 None:intergenic
CACTAGAATTCACAAGGCAT+TGG 0.529760 2.1:+62141435 MS.gene003232:CDS
ATGGCTAATTTGGCTTCCAA+AGG 0.534107 2.1:-62143346 None:intergenic
GCGCTACTTTCCTAATTGCT+CGG 0.534492 2.1:+62143793 MS.gene003232:CDS
CTCTGCACGTGCAATGTCCA+TGG 0.539317 2.1:-62143365 None:intergenic
TGGCTAATTTGGCTTCCAAA+GGG 0.539806 2.1:-62143345 None:intergenic
TCACATTGCTGCCATGCGTA+AGG 0.540227 2.1:+62141633 MS.gene003232:CDS
CGAGTTGATTCAATTGACAA+TGG 0.543054 2.1:-62141246 None:intergenic
CACAGTGGGCTACTGCATAG+TGG 0.545838 2.1:-62141531 None:intergenic
TCTTCTTAACTTTGTAGGGA+AGG 0.546009 2.1:+62141183 MS.gene003232:CDS
CATCATCCTGATGAAGGTCG+CGG 0.548121 2.1:-62141369 None:intergenic
ACACATGTAGACACCTCCAT+TGG 0.548193 2.1:-62140270 None:intergenic
AGTAGCCCACTGTGACCCTA+AGG 0.552063 2.1:+62141540 MS.gene003232:CDS
AGATGTCATTTCAATCCTCA+TGG 0.554111 2.1:+62141216 MS.gene003232:CDS
GGAAAGAAACAAATAAAGAC+CGG 0.554242 2.1:+62141788 MS.gene003232:CDS
GAACTTCAGAAACAACCTTA+GGG 0.555444 2.1:-62141555 None:intergenic
GTCAATCTTCGGAATTCTCG+AGG 0.563292 2.1:+62141598 MS.gene003232:CDS
GATGTATTATTGCTCAAAGA+GGG 0.566332 2.1:-62139871 None:intergenic
GTGCCACTCTGTCAACACAT+TGG 0.567094 2.1:-62141273 None:intergenic
GGGTGTCAGTCGAGATGGGG+CGG 0.570433 2.1:+62143771 MS.gene003232:intron
TCACCATACCTCTGTTCTCA+AGG 0.571825 2.1:-62141918 None:intergenic
TAGAGAGTCTGTATGTTACA+AGG 0.574111 2.1:+62144006 MS.gene003232:CDS
AAGGATTGTCGAAGAATGAA+GGG 0.575680 2.1:+62140142 MS.gene003232:CDS
TGTTGACAGAGTGGCACGAT+CGG 0.578105 2.1:+62141279 MS.gene003232:CDS
GTGCTGTTAGTATTTGTAGG+AGG 0.578982 2.1:+62141725 MS.gene003232:CDS
TTTGGAAGCCAAATTAGCCA+TGG 0.582434 2.1:+62143348 MS.gene003232:CDS
TAGGAGGTTGACGAGGCCAA+AGG 0.585498 2.1:+62141741 MS.gene003232:CDS
TTCCATGAAATATTTAAGAG+GGG 0.588302 2.1:+62140111 MS.gene003232:CDS
AAGAAGAGCAAAGAGTCAAG+AGG 0.588632 2.1:+62143879 MS.gene003232:CDS
TAAACTTAAACCCTCTCCAA+TGG 0.595072 2.1:+62140254 MS.gene003232:CDS
TGATGTATTATTGCTCAAAG+AGG 0.595361 2.1:-62139872 None:intergenic
GGTGGGTGTCAGTCGAGATG+GGG 0.597335 2.1:+62143768 MS.gene003232:intron
AGACTCTCTAAGGGATGAAG+AGG 0.598944 2.1:-62143993 None:intergenic
GAGACTTATTTCTAGGATGG+AGG 0.602102 2.1:+62143483 MS.gene003232:CDS
AGTATCGCTTCTTACGAAAG+GGG 0.605200 2.1:+62141669 MS.gene003232:CDS
TGGAAAAGTGATACCAACTC+TGG 0.609116 2.1:-62140378 None:intergenic
GTTTGTGCTCATGATGCTTG+CGG 0.612341 2.1:+62140300 MS.gene003232:CDS
TTCTTGAAAGAGAAATGCGA+AGG 0.612843 2.1:+62141824 MS.gene003232:CDS
GAATTCCGGTGAAAATTCAT+CGG 0.614156 2.1:+62140061 MS.gene003232:CDS
TCTCAATTGAGATCTGGTCA+AGG 0.616130 2.1:-62141303 None:intergenic
CAAGGTACAAAAGCTTCATG+TGG 0.618221 2.1:-62141900 None:intergenic
CTCTGTGTCTTCCCACACAG+TGG 0.626716 2.1:+62141867 MS.gene003232:CDS
CAAGGTAAAACAAATCAGGT+AGG 0.633426 2.1:-62143844 None:intergenic
AATTGAAGGCTCCTTACGCA+TGG 0.634465 2.1:-62141644 None:intergenic
GTAGACACCTCCATTGGAGA+GGG 0.634552 2.1:-62140264 None:intergenic
GTAACATACAGACTCTCTAA+GGG 0.634970 2.1:-62144002 None:intergenic
TGAAAACGATGCTCCTGTAG+TGG 0.635923 2.1:+62141390 MS.gene003232:CDS
ACTTAAACCCTCTCCAATGG+AGG 0.636356 2.1:+62140257 MS.gene003232:CDS
TGTTCAAACTTATAACCTCG+AGG 0.641337 2.1:-62139963 None:intergenic
ACAGAGGGATCTGTAGCCAA+AGG 0.651194 2.1:-62141850 None:intergenic
AACAACCTTAGGGTCACAGT+GGG 0.652928 2.1:-62141545 None:intergenic
TCAATCTTCGGAATTCTCGA+GGG 0.655049 2.1:+62141599 MS.gene003232:CDS
GCTTAAAGATGATGTCAACA+AGG 0.657265 2.1:+62143916 MS.gene003232:CDS
ACGAATCACTAGAATTCACA+AGG 0.672729 2.1:+62141429 MS.gene003232:CDS
GACAATGGAAAGCAACCATG+AGG 0.674409 2.1:-62141231 None:intergenic
CACTGTGTGGGAAGACACAG+AGG 0.675475 2.1:-62141866 None:intergenic
TGTAGACACCTCCATTGGAG+AGG 0.677893 2.1:-62140265 None:intergenic
TGCCCAATGTGTTGACAGAG+TGG 0.682710 2.1:+62141270 MS.gene003232:CDS
TTCAAACGGAAACTTAAGGG+AGG 0.682937 2.1:+62143426 MS.gene003232:CDS
GTATTTGTAGGAGGTTGACG+AGG 0.688711 2.1:+62141734 MS.gene003232:CDS
TGATGCCGATATCATTGTGG+AGG 0.689812 2.1:+62140038 MS.gene003232:CDS
GAGATCATCAGCCACTGTGT+GGG 0.692384 2.1:-62141878 None:intergenic
CGATCATGCTCGTAACCTCG+AGG 0.695662 2.1:+62139948 MS.gene003232:CDS
GGAGATCATCAGCCACTGTG+TGG 0.705139 2.1:-62141879 None:intergenic
TGGTGATGCCGATATCATTG+TGG 0.710168 2.1:+62140035 MS.gene003232:CDS
GATGCCGATATCATTGTGGA+GGG 0.714650 2.1:+62140039 MS.gene003232:CDS
AAACAACCTTAGGGTCACAG+TGG 0.718165 2.1:-62141546 None:intergenic
ACTGTGTGGGAAGACACAGA+GGG 0.734076 2.1:-62141865 None:intergenic
CATCCTGATGAAGGTCGCGG+CGG 0.747920 2.1:-62141366 None:intergenic
AGTGCTCGACAAGTTCATGG+AGG 0.770013 2.1:+62143817 MS.gene003232:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAAAAAAAAAAAAAA+AGG - chr2.1:62143141-62143160 None:intergenic 0.0%
!!! CTTTTATTTTTGAAGTATTT+GGG + chr2.1:62140678-62140697 MS.gene003232:intron 15.0%
!!! TATTATTATCAGATACTTTT+TGG + chr2.1:62140598-62140617 MS.gene003232:intron 15.0%
!!! TCTTTTATTTTTGAAGTATT+TGG + chr2.1:62140677-62140696 MS.gene003232:intron 15.0%
!!! TTTTAAACAATATTTTCCTA+AGG - chr2.1:62142669-62142688 None:intergenic 15.0%
!!! TTTTTTAAATTTTCTGTTTC+AGG + chr2.1:62143152-62143171 MS.gene003232:intron 15.0%
!! AAACAAAAAAACTCCAAAAT+GGG - chr2.1:62142128-62142147 None:intergenic 20.0%
!! AAGAACCACTTAAAATTTAT+GGG + chr2.1:62142166-62142185 MS.gene003232:intron 20.0%
!! AGTTCAAAATTACATAAAGT+TGG - chr2.1:62142290-62142309 None:intergenic 20.0%
!! ATAATATAGAGAAAACAGAA+AGG - chr2.1:62140750-62140769 None:intergenic 20.0%
!! ATATAGAAAAATGTTCAAGT+GGG - chr2.1:62140725-62140744 None:intergenic 20.0%
!! GGAATAATTAATTATCTGTT+AGG + chr2.1:62140789-62140808 MS.gene003232:intron 20.0%
!! TTTCCATGAAATATTTAAGA+GGG + chr2.1:62140110-62140129 MS.gene003232:CDS 20.0%
!!! ATGAAATTTAGTTCAAGTTT+AGG + chr2.1:62140768-62140787 MS.gene003232:intron 20.0%
!!! ATTGATTCTGATTATGATTA+TGG + chr2.1:62140015-62140034 MS.gene003232:CDS 20.0%
!!! GTATAGTAAGAAATTTGTTT+TGG - chr2.1:62140927-62140946 None:intergenic 20.0%
!!! TAAGAAATTTGTTTTGGAAA+AGG - chr2.1:62140921-62140940 None:intergenic 20.0%
!!! TTACTTTTGTTGATTTTGAA+GGG + chr2.1:62140975-62140994 MS.gene003232:intron 20.0%
!!! TTTACTTTTGTTGATTTTGA+AGG + chr2.1:62140974-62140993 MS.gene003232:intron 20.0%
!!! TTTTCCATGAAATATTTAAG+AGG + chr2.1:62140109-62140128 MS.gene003232:CDS 20.0%
! AATCATCATACAAAACATCT+TGG - chr2.1:62140833-62140852 None:intergenic 25.0%
! ATTTAGCTACAAATGAAACA+AGG - chr2.1:62142977-62142996 None:intergenic 25.0%
! CAAACAAAAAAACTCCAAAA+TGG - chr2.1:62142129-62142148 None:intergenic 25.0%
! CATATAGAAAAATGTTCAAG+TGG - chr2.1:62140726-62140745 None:intergenic 25.0%
! GAAGAACCACTTAAAATTTA+TGG + chr2.1:62142165-62142184 MS.gene003232:intron 25.0%
! TAGAATTGTACATAGAAACA+TGG - chr2.1:62143720-62143739 None:intergenic 25.0%
! TATAGAAAAATGTTCAAGTG+GGG - chr2.1:62140724-62140743 None:intergenic 25.0%
! TATTTAATAGTATCCTCTTG+TGG + chr2.1:62143539-62143558 MS.gene003232:intron 25.0%
! TCATAGATATAATGTTTACC+TGG - chr2.1:62140401-62140420 None:intergenic 25.0%
! TTCCATGAAATATTTAAGAG+GGG + chr2.1:62140111-62140130 MS.gene003232:CDS 25.0%
!! AAAACAAAATGACTCAGTTT+TGG - chr2.1:62142044-62142063 None:intergenic 25.0%
!! AAAACAAGAGACTTATTTCT+AGG + chr2.1:62143476-62143495 MS.gene003232:CDS 25.0%
!! AAACAAAATGACTCAGTTTT+GGG - chr2.1:62142043-62142062 None:intergenic 25.0%
!! AAGATGTATTTGAGAAGTAT+TGG + chr2.1:62140546-62140565 MS.gene003232:intron 25.0%
!! AATTCTAGTGATTCGTTTTA+GGG - chr2.1:62141425-62141444 None:intergenic 25.0%
AAATCAATCAGAGAATCAGA+TGG - chr2.1:62143658-62143677 None:intergenic 30.0%
AATATAGCTTAGAGCATGAA+AGG + chr2.1:62142730-62142749 MS.gene003232:intron 30.0%
AGAAGCGATACTATAATTGA+AGG - chr2.1:62141661-62141680 None:intergenic 30.0%
AGTCATATTGTATCTGATCA+AGG + chr2.1:62141115-62141134 MS.gene003232:intron 30.0%
ATAGAAAAATGTTCAAGTGG+GGG - chr2.1:62140723-62140742 None:intergenic 30.0%
ATATAGCTTAGAGCATGAAA+GGG + chr2.1:62142731-62142750 MS.gene003232:intron 30.0%
ATTGTATCTGATCAAGGTTA+AGG + chr2.1:62141121-62141140 MS.gene003232:intron 30.0%
CAACTCTGGTATTTGAAAAA+TGG - chr2.1:62140367-62140386 None:intergenic 30.0%
CAATCTTACCTTGCAATTAA+AGG - chr2.1:62142538-62142557 None:intergenic 30.0%
CAGCAATGCTTATTATTTGA+TGG - chr2.1:62143293-62143312 None:intergenic 30.0%
CATAATTGGCATCTTATGTT+GGG + chr2.1:62141050-62141069 MS.gene003232:intron 30.0%
CCATATATCTTGCTTTCTTT+AGG + chr2.1:62141027-62141046 MS.gene003232:intron 30.0%
CCTAAAGAAAGCAAGATATA+TGG - chr2.1:62141030-62141049 None:intergenic 30.0%
CTAAAGTTTCATCTAGCAAA+AGG + chr2.1:62142395-62142414 MS.gene003232:intron 30.0%
CTGATTTACTATGTTTGTGT+TGG + chr2.1:62143250-62143269 MS.gene003232:intron 30.0%
GATGTATTATTGCTCAAAGA+GGG - chr2.1:62139874-62139893 None:intergenic 30.0%
GGAAAGAAACAAATAAAGAC+CGG + chr2.1:62141788-62141807 MS.gene003232:CDS 30.0%
TAAAACCTTCAGCAGAAAAT+TGG - chr2.1:62142442-62142461 None:intergenic 30.0%
TACCCCTCTTAAATATTTCA+TGG - chr2.1:62140116-62140135 None:intergenic 30.0%
TATCACACAAAAACAGAACA+GGG + chr2.1:62141766-62141785 MS.gene003232:CDS 30.0%
TCAGAGAATTTAGATAGTTC+TGG + chr2.1:62142309-62142328 MS.gene003232:intron 30.0%
TCTATTGTTAGTTAGACGTA+CGG + chr2.1:62140462-62140481 MS.gene003232:intron 30.0%
TGATGTATTATTGCTCAAAG+AGG - chr2.1:62139875-62139894 None:intergenic 30.0%
TGGTATTTGAAAAATGGAAG+AGG - chr2.1:62140361-62140380 None:intergenic 30.0%
TGTATGATGATTCAGAACAT+GGG + chr2.1:62140841-62140860 MS.gene003232:intron 30.0%
TTATCACACAAAAACAGAAC+AGG + chr2.1:62141765-62141784 MS.gene003232:CDS 30.0%
TTCATATGGCTGAAAAATTC+AGG + chr2.1:62143098-62143117 MS.gene003232:intron 30.0%
TTGCTTTCTTTAGGCATAAT+TGG + chr2.1:62141036-62141055 MS.gene003232:intron 30.0%
TTGTATGATGATTCAGAACA+TGG + chr2.1:62140840-62140859 MS.gene003232:intron 30.0%
TTTAAGAGGGGTAAAGATAA+AGG + chr2.1:62140123-62140142 MS.gene003232:CDS 30.0%
TTTGGGAAATTTCCATTCAA+AGG - chr2.1:62142026-62142045 None:intergenic 30.0%
! CGAAACCCATAAATTTTAAG+TGG - chr2.1:62142174-62142193 None:intergenic 30.0%
! GAATTCTAGTGATTCGTTTT+AGG - chr2.1:62141426-62141445 None:intergenic 30.0%
! GTTTTTGTGTGATAATCCTT+TGG - chr2.1:62141760-62141779 None:intergenic 30.0%
!! CATTTTTCAAATACCAGAGT+TGG + chr2.1:62140365-62140384 MS.gene003232:CDS 30.0%
!! TAGATAGTTCTGGAAATGTA+AGG + chr2.1:62142319-62142338 MS.gene003232:intron 30.0%
!! TGAATTTTTCAGCCATATGA+AGG - chr2.1:62143099-62143118 None:intergenic 30.0%
!!! AAGTCTCTTGTTTTGCATTA+TGG - chr2.1:62143470-62143489 None:intergenic 30.0%
!!! AGTCTCTTGTTTTGCATTAT+GGG - chr2.1:62143469-62143488 None:intergenic 30.0%
!!! GATTTGTTTTACCTTGAGAA+GGG + chr2.1:62143851-62143870 MS.gene003232:CDS 30.0%
!!! TGATTTGTTTTACCTTGAGA+AGG + chr2.1:62143850-62143869 MS.gene003232:CDS 30.0%
AAAATTCATCGGTGCATTCT+AGG + chr2.1:62140072-62140091 MS.gene003232:CDS 35.0%
AAAGGATTGTCGAAGAATGA+AGG + chr2.1:62140141-62140160 MS.gene003232:CDS 35.0%
AAGGATTGTCGAAGAATGAA+GGG + chr2.1:62140142-62140161 MS.gene003232:CDS 35.0%
AAGGTTCAAACGGAAACTTA+AGG + chr2.1:62143422-62143441 MS.gene003232:CDS 35.0%
AATAAAGCTGGCAAATCCAA+TGG - chr2.1:62142242-62142261 None:intergenic 35.0%
AATACCAGCATAAACAAGAC+AGG - chr2.1:62143178-62143197 None:intergenic 35.0%
AATTCCCTCCACAATGATAT+CGG - chr2.1:62140046-62140065 None:intergenic 35.0%
ACCGTGAAAATCAATAAAGC+TGG - chr2.1:62142254-62142273 None:intergenic 35.0%
ACGAATCACTAGAATTCACA+AGG + chr2.1:62141429-62141448 MS.gene003232:CDS 35.0%
AGAACTTCAGAAACAACCTT+AGG - chr2.1:62141559-62141578 None:intergenic 35.0%
AGACGTCTTCTTAACTTTGT+AGG + chr2.1:62141178-62141197 MS.gene003232:CDS 35.0%
AGGTTCAAACGGAAACTTAA+GGG + chr2.1:62143423-62143442 MS.gene003232:CDS 35.0%
AGTCAACATGAAAATCTCTC+TGG - chr2.1:62143001-62143020 None:intergenic 35.0%
ATAGTATCGCTTCTTACGAA+AGG + chr2.1:62141667-62141686 MS.gene003232:CDS 35.0%
ATCACACAAAAACAGAACAG+GGG + chr2.1:62141767-62141786 MS.gene003232:CDS 35.0%
ATTAGCGTCCTTTAATTGCA+AGG + chr2.1:62142527-62142546 MS.gene003232:intron 35.0%
ATTCACAAGTTACCGCATTA+GGG + chr2.1:62142363-62142382 MS.gene003232:intron 35.0%
CAAGAACATCAATGCATATC+CGG - chr2.1:62141810-62141829 None:intergenic 35.0%
CATCTTATGTTGGGCATATT+TGG + chr2.1:62141059-62141078 MS.gene003232:intron 35.0%
CTGTCTTCAATGTTCTTATG+TGG + chr2.1:62143747-62143766 MS.gene003232:intron 35.0%
CTTCAATGTTCTTATGTGGT+GGG + chr2.1:62143751-62143770 MS.gene003232:intron 35.0%
GAAATTTCCATTCAAAGGCA+TGG - chr2.1:62142021-62142040 None:intergenic 35.0%
GAACATAAGCAAGAAGTTGA+AGG - chr2.1:62141948-62141967 None:intergenic 35.0%
GAACTTCAGAAACAACCTTA+GGG - chr2.1:62141558-62141577 None:intergenic 35.0%
GAAGAAGTCTTAACTGAGTA+AGG + chr2.1:62142759-62142778 MS.gene003232:intron 35.0%
GAATTCCGGTGAAAATTCAT+CGG + chr2.1:62140061-62140080 MS.gene003232:CDS 35.0%
GACATTACTTTAGATGAAGC+TGG + chr2.1:62141502-62141521 MS.gene003232:CDS 35.0%
GACGTCTTCTTAACTTTGTA+GGG + chr2.1:62141179-62141198 MS.gene003232:CDS 35.0%
GCATAATTGGCATCTTATGT+TGG + chr2.1:62141049-62141068 MS.gene003232:intron 35.0%
GCTTAAAGATGATGTCAACA+AGG + chr2.1:62143916-62143935 MS.gene003232:CDS 35.0%
GTAACATACAGACTCTCTAA+GGG - chr2.1:62144005-62144024 None:intergenic 35.0%
GTTTGGCTAATGTCAATCTT+CGG + chr2.1:62141587-62141606 MS.gene003232:CDS 35.0%
TAAACTTAAACCCTCTCCAA+TGG + chr2.1:62140254-62140273 MS.gene003232:CDS 35.0%
TAGAGAGTCTGTATGTTACA+AGG + chr2.1:62144006-62144025 MS.gene003232:CDS 35.0%
TAGTATCGCTTCTTACGAAA+GGG + chr2.1:62141668-62141687 MS.gene003232:CDS 35.0%
TATCAGTATCCGATATGTGT+CGG + chr2.1:62140647-62140666 MS.gene003232:intron 35.0%
TCATAACCAACTTTGCCATA+AGG - chr2.1:62140198-62140217 None:intergenic 35.0%
TCATCTAGCAAAAGGAATTC+AGG + chr2.1:62142403-62142422 MS.gene003232:intron 35.0%
TCCACAGCAAAATTAATTGC+AGG - chr2.1:62140327-62140346 None:intergenic 35.0%
TCTCTATAACGATGTGGATT+CGG + chr2.1:62143603-62143622 MS.gene003232:intron 35.0%
TCTTCAATGTTCTTATGTGG+TGG + chr2.1:62143750-62143769 MS.gene003232:intron 35.0%
TCTTCTTAACTTTGTAGGGA+AGG + chr2.1:62141183-62141202 MS.gene003232:CDS 35.0%
TGATCCACGACAACAATATA+TGG - chr2.1:62141970-62141989 None:intergenic 35.0%
TGTAACATACAGACTCTCTA+AGG - chr2.1:62144006-62144025 None:intergenic 35.0%
TGTTCAAACTTATAACCTCG+AGG - chr2.1:62139966-62139985 None:intergenic 35.0%
TGTTCCATATATTGTTGTCG+TGG + chr2.1:62141963-62141982 MS.gene003232:intron 35.0%
TGTTTGTGAAAAATGCCACT+CGG + chr2.1:62142143-62142162 MS.gene003232:intron 35.0%
TTACTATAAAGCTCCTTCCA+TGG - chr2.1:62142601-62142620 None:intergenic 35.0%
TTCCAAAGGGAAAAATAGTC+TGG - chr2.1:62143335-62143354 None:intergenic 35.0%
TTCTTGAAAGAGAAATGCGA+AGG + chr2.1:62141824-62141843 MS.gene003232:CDS 35.0%
TTCTTGAGCTATGCATATAG+TGG + chr2.1:62140231-62140250 MS.gene003232:CDS 35.0%
! ACCTGCAATTAATTTTGCTG+TGG + chr2.1:62140323-62140342 MS.gene003232:CDS 35.0%
! AGATGTCATTTCAATCCTCA+TGG + chr2.1:62141216-62141235 MS.gene003232:CDS 35.0%
! GAACAAGCTGAGTTCTAATT+TGG + chr2.1:62139981-62140000 MS.gene003232:CDS 35.0%
! GAAGAAGTTCTTGATGCTTT+TGG + chr2.1:62142917-62142936 MS.gene003232:intron 35.0%
! GCAATTACCTGTTTTCATCA+GGG - chr2.1:62143509-62143528 None:intergenic 35.0%
! TGCAATTACCTGTTTTCATC+AGG - chr2.1:62143510-62143529 None:intergenic 35.0%
!! AACTTTTTCTGAGAGCTCAT+GGG - chr2.1:62141338-62141357 None:intergenic 35.0%
!! AAGGTTGTTTCTGAAGTTCT+TGG + chr2.1:62141559-62141578 MS.gene003232:CDS 35.0%
!! AGAGTGCTGTTAGTATTTGT+AGG + chr2.1:62141722-62141741 MS.gene003232:CDS 35.0%
!! ATACTTTTTGGACACGTATC+GGG + chr2.1:62140610-62140629 MS.gene003232:intron 35.0%
!! ATTTTTCAGCCATATGAAGG+TGG - chr2.1:62143096-62143115 None:intergenic 35.0%
!! CAAGAGACTTATTTCTAGGA+TGG + chr2.1:62143480-62143499 MS.gene003232:CDS 35.0%
!! CGAGTTGATTCAATTGACAA+TGG - chr2.1:62141249-62141268 None:intergenic 35.0%
!! GATACTTTTTGGACACGTAT+CGG + chr2.1:62140609-62140628 MS.gene003232:intron 35.0%
!! GTTTCTGAAGTTCTTGGATT+GGG + chr2.1:62141565-62141584 MS.gene003232:CDS 35.0%
!! TAACTTTTTCTGAGAGCTCA+TGG - chr2.1:62141339-62141358 None:intergenic 35.0%
!! TGTTTCTGAAGTTCTTGGAT+TGG + chr2.1:62141564-62141583 MS.gene003232:CDS 35.0%
!!! AGTAACAGGTTGCTGTTTTT+AGG + chr2.1:62142616-62142635 MS.gene003232:intron 35.0%
!!! GCCAGCTTTATTGATTTTCA+CGG + chr2.1:62142250-62142269 MS.gene003232:intron 35.0%
!!! GTAACAGGTTGCTGTTTTTA+GGG + chr2.1:62142617-62142636 MS.gene003232:intron 35.0%
AAACAAGGCAAAATCGATGC+TGG - chr2.1:62142962-62142981 None:intergenic 40.0%
AAACTCCAAAATGGGAAGCA+AGG - chr2.1:62142120-62142139 None:intergenic 40.0%
AAGAAGAGCAAAGAGTCAAG+AGG + chr2.1:62143879-62143898 MS.gene003232:CDS 40.0%
AGAAATGCGAAGGAATCCTT+TGG + chr2.1:62141834-62141853 MS.gene003232:CDS 40.0%
AGCACTCAGTGAAAAGGATT+AGG + chr2.1:62142832-62142851 MS.gene003232:intron 40.0%
AGGAGCAACTGATCTTATAG+AGG + chr2.1:62142895-62142914 MS.gene003232:intron 40.0%
AGGGCATATGTTGTGACTAA+TGG - chr2.1:62139920-62139939 None:intergenic 40.0%
AGTATCGCTTCTTACGAAAG+GGG + chr2.1:62141669-62141688 MS.gene003232:CDS 40.0%
AGTCACAACATATGCCCTAA+TGG + chr2.1:62139922-62139941 MS.gene003232:CDS 40.0%
ATAGTATCCTCTTGTGGTCA+CGG + chr2.1:62143545-62143564 MS.gene003232:intron 40.0%
ATGACAGTTGCGTCTTTAGT+TGG + chr2.1:62140511-62140530 MS.gene003232:intron 40.0%
ATGATTCAGAACATGGGAAG+AGG + chr2.1:62140847-62140866 MS.gene003232:intron 40.0%
CAAATCCTAATCACTCGCAA+GGG - chr2.1:62142468-62142487 None:intergenic 40.0%
CAAGGTACAAAAGCTTCATG+TGG - chr2.1:62141903-62141922 None:intergenic 40.0%
CACTAGAATTCACAAGGCAT+TGG + chr2.1:62141435-62141454 MS.gene003232:CDS 40.0%
CCTTAATCAGTGAAGACAGA+TGG - chr2.1:62142802-62142821 None:intergenic 40.0%
CGGTTAACTCTGGGTTTATA+CGG + chr2.1:62143623-62143642 MS.gene003232:intron 40.0%
CTTGACTCTTTGCTCTTCTT+GGG - chr2.1:62143879-62143898 None:intergenic 40.0%
GATTCACAAGTTACCGCATT+AGG + chr2.1:62142362-62142381 MS.gene003232:intron 40.0%
GCTCTTTCTCAATTGAGATC+TGG - chr2.1:62141312-62141331 None:intergenic 40.0%
GGAAATGTAAGGCTGGAATT+TGG + chr2.1:62142330-62142349 MS.gene003232:intron 40.0%
GTGACTTCTCTATAACGATG+TGG + chr2.1:62143597-62143616 MS.gene003232:intron 40.0%
TAAGGTGAATCCAATGACCA+AGG - chr2.1:62142651-62142670 None:intergenic 40.0%
TAATTCCCTTGCGAGTGATT+AGG + chr2.1:62142460-62142479 MS.gene003232:intron 40.0%
TACGGAACACGTATTGTATC+CGG + chr2.1:62140480-62140499 MS.gene003232:intron 40.0%
TAGAACTCTACACCCTAATG+CGG - chr2.1:62142378-62142397 None:intergenic 40.0%
TATCATTGTGGAGGGAATTC+CGG + chr2.1:62140047-62140066 MS.gene003232:CDS 40.0%
TCAATCTTCGGAATTCTCGA+GGG + chr2.1:62141599-62141618 MS.gene003232:CDS 40.0%
TCATCTTCGCACTTGTCAAA+TGG + chr2.1:62139892-62139911 MS.gene003232:CDS 40.0%
TCGGCATCAAAAGGTTCAAA+CGG + chr2.1:62143412-62143431 MS.gene003232:CDS 40.0%
TCTCAATTGAGATCTGGTCA+AGG - chr2.1:62141306-62141325 None:intergenic 40.0%
TCTTGACTCTTTGCTCTTCT+TGG - chr2.1:62143880-62143899 None:intergenic 40.0%
TCTTTAACTCCTTGTGCAAC+TGG + chr2.1:62142201-62142220 MS.gene003232:intron 40.0%
TGCAATGTCCATGGCTAATT+TGG - chr2.1:62143359-62143378 None:intergenic 40.0%
TGGAAAAGTGATACCAACTC+TGG - chr2.1:62140381-62140400 None:intergenic 40.0%
TTCAAACGGAAACTTAAGGG+AGG + chr2.1:62143426-62143445 MS.gene003232:CDS 40.0%
TTCGTTTCCATGCCTTTGAA+TGG + chr2.1:62142011-62142030 MS.gene003232:intron 40.0%
TTGGTCATTGGATTCACCTT+AGG + chr2.1:62142650-62142669 MS.gene003232:intron 40.0%
TTGTTGCCTTATGGCAAAGT+TGG + chr2.1:62140189-62140208 MS.gene003232:CDS 40.0%
TTTGGAAGCCAAATTAGCCA+TGG + chr2.1:62143348-62143367 MS.gene003232:CDS 40.0%
! ATGGCTAATTTGGCTTCCAA+AGG - chr2.1:62143349-62143368 None:intergenic 40.0%
! ATGTGGATTCGGTTAACTCT+GGG + chr2.1:62143614-62143633 MS.gene003232:intron 40.0%
! CCATCTGTCTTCACTGATTA+AGG + chr2.1:62142799-62142818 MS.gene003232:intron 40.0%
! CGTTTTCATCATCCTGATGA+AGG - chr2.1:62141378-62141397 None:intergenic 40.0%
! CTTTTGTACCTTGAGAACAG+AGG + chr2.1:62141910-62141929 MS.gene003232:CDS 40.0%
! GGAAGGAGCTTTATAGTAAC+AGG + chr2.1:62142602-62142621 MS.gene003232:intron 40.0%
! GTGCTGTTAGTATTTGTAGG+AGG + chr2.1:62141725-62141744 MS.gene003232:CDS 40.0%
! TGAAGTTCTTGGATTGGGTT+TGG + chr2.1:62141570-62141589 MS.gene003232:CDS 40.0%
! TGGCTAATTTGGCTTCCAAA+GGG - chr2.1:62143348-62143367 None:intergenic 40.0%
!! ACTTTTTCTGAGAGCTCATG+GGG - chr2.1:62141337-62141356 None:intergenic 40.0%
!! ATGCACCGATGAATTTTCAC+CGG - chr2.1:62140069-62140088 None:intergenic 40.0%
!! GAGACTTATTTCTAGGATGG+AGG + chr2.1:62143483-62143502 MS.gene003232:CDS 40.0%
!! TAGTTCTGGAAATGTAAGGC+TGG + chr2.1:62142323-62142342 MS.gene003232:intron 40.0%
!! TGCCAGACTATTTTTCCCTT+TGG + chr2.1:62143330-62143349 MS.gene003232:CDS 40.0%
!! TTGAGCGATTTGTTGCCTTA+TGG + chr2.1:62140180-62140199 MS.gene003232:CDS 40.0%
!! TTTGCTGTTGCATTACGAAG+AGG + chr2.1:62142484-62142503 MS.gene003232:intron 40.0%
!! TTTTAAGTGGTTCTTCCGAG+TGG - chr2.1:62142161-62142180 None:intergenic 40.0%
!!! AGAGTTGGTATCACTTTTCC+AGG + chr2.1:62140380-62140399 MS.gene003232:CDS 40.0%
!!! TTTTTAGGGTTCTTGCTCCT+TGG + chr2.1:62142631-62142650 MS.gene003232:intron 40.0%
AAACAACCTTAGGGTCACAG+TGG - chr2.1:62141549-62141568 None:intergenic 45.0%
AAAGCTGAGTTTAGTCGCTC+TGG + chr2.1:62143953-62143972 MS.gene003232:CDS 45.0%
AACAACCTTAGGGTCACAGT+GGG - chr2.1:62141548-62141567 None:intergenic 45.0%
AAGCTGAGTTTAGTCGCTCT+GGG + chr2.1:62143954-62143973 MS.gene003232:CDS 45.0%
AATTGAAGGCTCCTTACGCA+TGG - chr2.1:62141647-62141666 None:intergenic 45.0%
ACACATGTAGACACCTCCAT+TGG - chr2.1:62140273-62140292 None:intergenic 45.0%
ACGGAACACGTATTGTATCC+GGG + chr2.1:62140481-62140500 MS.gene003232:intron 45.0%
ACTTAAACCCTCTCCAATGG+AGG + chr2.1:62140257-62140276 MS.gene003232:CDS 45.0%
AGCTGGAGCAAGAACAAGTA+TGG - chr2.1:62142867-62142886 None:intergenic 45.0%
AGGAATTCAGGCGCAAACAA+AGG + chr2.1:62142415-62142434 MS.gene003232:intron 45.0%
ATCGGTGCATTCTAGGTTCT+AGG + chr2.1:62140079-62140098 MS.gene003232:CDS 45.0%
CTAAAGACGCAACTGTCATC+CGG - chr2.1:62140510-62140529 None:intergenic 45.0%
CTTAGAGCATGAAAGGGAGA+AGG + chr2.1:62142737-62142756 MS.gene003232:intron 45.0%
GACAATGGAAAGCAACCATG+AGG - chr2.1:62141234-62141253 None:intergenic 45.0%
GATGCCGATATCATTGTGGA+GGG + chr2.1:62140039-62140058 MS.gene003232:CDS 45.0%
GCAAATCCTAATCACTCGCA+AGG - chr2.1:62142469-62142488 None:intergenic 45.0%
GGAATTCAGGCGCAAACAAA+GGG + chr2.1:62142416-62142435 MS.gene003232:intron 45.0%
GTAAGGCTGGAATTTGGAAG+TGG + chr2.1:62142336-62142355 MS.gene003232:intron 45.0%
GTACCTTGAGAACAGAGGTA+TGG + chr2.1:62141915-62141934 MS.gene003232:intron 45.0%
GTATTTGTAGGAGGTTGACG+AGG + chr2.1:62141734-62141753 MS.gene003232:CDS 45.0%
GTCAATCTTCGGAATTCTCG+AGG + chr2.1:62141598-62141617 MS.gene003232:CDS 45.0%
GTTTGTGCTCATGATGCTTG+CGG + chr2.1:62140300-62140319 MS.gene003232:CDS 45.0%
TAAAGACGCAACTGTCATCC+GGG - chr2.1:62140509-62140528 None:intergenic 45.0%
TCACCATACCTCTGTTCTCA+AGG - chr2.1:62141921-62141940 None:intergenic 45.0%
TCTTCGTCATGTACCATGGA+AGG + chr2.1:62142585-62142604 MS.gene003232:intron 45.0%
TGAAAACGATGCTCCTGTAG+TGG + chr2.1:62141390-62141409 MS.gene003232:CDS 45.0%
TGAGTGAGCACTCAGTGAAA+AGG + chr2.1:62142826-62142845 MS.gene003232:intron 45.0%
TGATGCCGATATCATTGTGG+AGG + chr2.1:62140038-62140057 MS.gene003232:CDS 45.0%
TGCCACTCTGTCAACACATT+GGG - chr2.1:62141275-62141294 None:intergenic 45.0%
TTCCATGGTACATGACGAAG+AGG - chr2.1:62142586-62142605 None:intergenic 45.0%
! AAGGGCCAATTTTCTGCTGA+AGG + chr2.1:62142434-62142453 MS.gene003232:intron 45.0%
! AGACTCTCTAAGGGATGAAG+AGG - chr2.1:62143996-62144015 None:intergenic 45.0%
! AGTATCCGATATGTGTCGGT+CGG + chr2.1:62140651-62140670 MS.gene003232:intron 45.0%
! GAGGTCACACGTTTGAGTTA+TGG + chr2.1:62142503-62142522 MS.gene003232:intron 45.0%
! GATGTGGATTCGGTTAACTC+TGG + chr2.1:62143613-62143632 MS.gene003232:intron 45.0%
! GCATCGGATTTGACTTTCGA+TGG + chr2.1:62141697-62141716 MS.gene003232:CDS 45.0%
! GCGCTACTTTCCTAATTGCT+CGG + chr2.1:62143793-62143812 MS.gene003232:CDS 45.0%
! GTGATCCTTGCTTCCCATTT+TGG + chr2.1:62142112-62142131 MS.gene003232:intron 45.0%
! TGGTGATGCCGATATCATTG+TGG + chr2.1:62140035-62140054 MS.gene003232:CDS 45.0%
!! ATCCGAGTTTGCTGGTCTTT+CGG + chr2.1:62143393-62143412 MS.gene003232:CDS 45.0%
!!! TATTTTTTTTTAATTAAAAC+TGG - chr2.1:62143041-62143060 None:intergenic 5.0%
ACAGAGGGATCTGTAGCCAA+AGG - chr2.1:62141853-62141872 None:intergenic 50.0%
ACGTATTGTATCCGGGATCC+CGG + chr2.1:62140488-62140507 MS.gene003232:intron 50.0%
ACTGTGTGGGAAGACACAGA+GGG - chr2.1:62141868-62141887 None:intergenic 50.0%
AGTGCTCGACAAGTTCATGG+AGG + chr2.1:62143817-62143836 MS.gene003232:CDS 50.0%
ATCCAATGGTCAGCTTTCCG+AGG - chr2.1:62142228-62142247 None:intergenic 50.0%
ATGGAGGCCCTGATGAAAAC+AGG + chr2.1:62143499-62143518 MS.gene003232:CDS 50.0%
CATCATCCTGATGAAGGTCG+CGG - chr2.1:62141372-62141391 None:intergenic 50.0%
CGATTTCCAATGGAATCGCG+GGG + chr2.1:62143568-62143587 MS.gene003232:intron 50.0%
CTCGAGGTTACGAGCATGAT+CGG - chr2.1:62139950-62139969 None:intergenic 50.0%
CTTGCTCCAGCTCTCAGATT+AGG + chr2.1:62142875-62142894 MS.gene003232:intron 50.0%
CTTTGTAGGGAAGGCTCTTG+TGG + chr2.1:62141192-62141211 MS.gene003232:CDS 50.0%
GACCTCTTCGTCATGTACCA+TGG + chr2.1:62142581-62142600 MS.gene003232:intron 50.0%
GAGACAACATCCGAGTTTGC+TGG + chr2.1:62143385-62143404 MS.gene003232:CDS 50.0%
GAGATCATCAGCCACTGTGT+GGG - chr2.1:62141881-62141900 None:intergenic 50.0%
GAGCATGATCGGAGCCATTA+GGG - chr2.1:62139939-62139958 None:intergenic 50.0%
GCGATTTCCAATGGAATCGC+GGG + chr2.1:62143567-62143586 MS.gene003232:intron 50.0%
GGCGATTTCCAATGGAATCG+CGG + chr2.1:62143566-62143585 MS.gene003232:intron 50.0%
GGCTGGAATTTGGAAGTGGT+TGG + chr2.1:62142340-62142359 MS.gene003232:intron 50.0%
GGTTCTTGCTCCTTGGTCAT+TGG + chr2.1:62142638-62142657 MS.gene003232:intron 50.0%
GTACATGACGAAGAGGTCAC+AGG - chr2.1:62142579-62142598 None:intergenic 50.0%
GTAGACACCTCCATTGGAGA+GGG - chr2.1:62140267-62140286 None:intergenic 50.0%
GTTGCTCCTAATCTGAGAGC+TGG - chr2.1:62142884-62142903 None:intergenic 50.0%
TACGAAAGGGGCTTGTGCAT+CGG + chr2.1:62141681-62141700 MS.gene003232:CDS 50.0%
TCACATTGCTGCCATGCGTA+AGG + chr2.1:62141633-62141652 MS.gene003232:CDS 50.0%
TCGAGCACTTCCGAGCAATT+AGG - chr2.1:62143806-62143825 None:intergenic 50.0%
TGCCGAAAGACCAGCAAACT+CGG - chr2.1:62143398-62143417 None:intergenic 50.0%
TGTAGACACCTCCATTGGAG+AGG - chr2.1:62140268-62140287 None:intergenic 50.0%
TGTTGACAGAGTGGCACGAT+CGG + chr2.1:62141279-62141298 MS.gene003232:CDS 50.0%
TTGTCGTGGATCAAGCTTCG+AGG + chr2.1:62141977-62141996 MS.gene003232:intron 50.0%
! AGGGACAAAGTGTCCACTAC+AGG - chr2.1:62141406-62141425 None:intergenic 50.0%
! GTGCCACTCTGTCAACACAT+TGG - chr2.1:62141276-62141295 None:intergenic 50.0%
! TGCCCAATGTGTTGACAGAG+TGG + chr2.1:62141270-62141289 MS.gene003232:CDS 50.0%
!! CAGGCCTGTCTTGTTTATGC+TGG + chr2.1:62143171-62143190 MS.gene003232:intron 50.0%
!! GCTGGTCTTTCGGCATCAAA+AGG + chr2.1:62143403-62143422 MS.gene003232:CDS 50.0%
!! GGAAGTGCTCGACAAGTTCA+TGG + chr2.1:62143814-62143833 MS.gene003232:CDS 50.0%
AGCATTGCTGTCTGCTGCAG+TGG + chr2.1:62143303-62143322 MS.gene003232:intron 55.0%
AGTAGCCCACTGTGACCCTA+AGG + chr2.1:62141540-62141559 MS.gene003232:CDS 55.0%
CACTGTGTGGGAAGACACAG+AGG - chr2.1:62141869-62141888 None:intergenic 55.0%
CGAGCATGATCGGAGCCATT+AGG - chr2.1:62139940-62139959 None:intergenic 55.0%
CGATCATGCTCGTAACCTCG+AGG + chr2.1:62139948-62139967 MS.gene003232:CDS 55.0%
CTCCTTGTGCAACTGGACCT+CGG + chr2.1:62142208-62142227 MS.gene003232:intron 55.0%
CTCTGCACGTGCAATGTCCA+TGG - chr2.1:62143368-62143387 None:intergenic 55.0%
CTCTGTGTCTTCCCACACAG+TGG + chr2.1:62141867-62141886 MS.gene003232:CDS 55.0%
CTTCTTGGGTGCCCTTCTCA+AGG - chr2.1:62143865-62143884 None:intergenic 55.0%
GAAATCGCCGTGACCACAAG+AGG - chr2.1:62143555-62143574 None:intergenic 55.0%
GACCTCGGAAAGCTGACCAT+TGG + chr2.1:62142223-62142242 MS.gene003232:intron 55.0%
GCGCTGAGACCACCTTCATA+TGG + chr2.1:62143084-62143103 MS.gene003232:intron 55.0%
GGAGATCATCAGCCACTGTG+TGG - chr2.1:62141882-62141901 None:intergenic 55.0%
GTGGTCACGGCGATTTCCAA+TGG + chr2.1:62143558-62143577 MS.gene003232:intron 55.0%
TAGGAGGTTGACGAGGCCAA+AGG + chr2.1:62141741-62141760 MS.gene003232:CDS 55.0%
TTCCGAGGTCCAGTTGCACA+AGG - chr2.1:62142213-62142232 None:intergenic 55.0%
! TGGTGGGTGTCAGTCGAGAT+GGG + chr2.1:62143767-62143786 MS.gene003232:intron 55.0%
!! CACAGTGGGCTACTGCATAG+TGG - chr2.1:62141534-62141553 None:intergenic 55.0%
!! GAGCACCGACCGACACATAT+CGG - chr2.1:62140659-62140678 None:intergenic 55.0%
CATCCTGATGAAGGTCGCGG+CGG - chr2.1:62141369-62141388 None:intergenic 60.0%
GCAACTGTCATCCGGGATCC+CGG - chr2.1:62140502-62140521 None:intergenic 60.0%
GGTGGGTGTCAGTCGAGATG+GGG + chr2.1:62143768-62143787 MS.gene003232:intron 60.0%
!! GTGGTGGGTGTCAGTCGAGA+TGG + chr2.1:62143766-62143785 MS.gene003232:intron 60.0%
CAATGGAATCGCGGGGCAGC+AGG + chr2.1:62143575-62143594 MS.gene003232:intron 65.0%
CTGCTGCCCCGCGATTCCAT+TGG - chr2.1:62143577-62143596 None:intergenic 65.0%
GGGTGTCAGTCGAGATGGGG+CGG + chr2.1:62143771-62143790 MS.gene003232:intron 65.0%
GCTCCGCCGCGACCTTCATC+AGG + chr2.1:62141363-62141382 MS.gene003232:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 62139853 62144042 62139853 ID=MS.gene003232
chr2.1 mRNA 62139853 62144042 62139853 ID=MS.gene003232.t1;Parent=MS.gene003232
chr2.1 exon 62139853 62140401 62139853 ID=MS.gene003232.t1.exon1;Parent=MS.gene003232.t1
chr2.1 CDS 62139853 62140401 62139853 ID=cds.MS.gene003232.t1;Parent=MS.gene003232.t1
chr2.1 exon 62141178 62141931 62141178 ID=MS.gene003232.t1.exon2;Parent=MS.gene003232.t1
chr2.1 CDS 62141178 62141931 62141178 ID=cds.MS.gene003232.t1;Parent=MS.gene003232.t1
chr2.1 exon 62143323 62143520 62143323 ID=MS.gene003232.t1.exon3;Parent=MS.gene003232.t1
chr2.1 CDS 62143323 62143520 62143323 ID=cds.MS.gene003232.t1;Parent=MS.gene003232.t1
chr2.1 exon 62143780 62144042 62143780 ID=MS.gene003232.t1.exon4;Parent=MS.gene003232.t1
chr2.1 CDS 62143780 62144042 62143780 ID=cds.MS.gene003232.t1;Parent=MS.gene003232.t1
Gene Sequence

>MS.gene003232

ATGGCTAATTCGGCTGAACCCTCTTTGAGCAATAATACATCATCTTCGCACTTGTCAAATGGATCCATTAGTCACAACATATGCCCTAATGGCTCCGATCATGCTCGTAACCTCGAGGTTATAAGTTTGAACAAGCTGAGTTCTAATTTGGAGCAGCTTTTGATTGATTCTGATTATGATTATGGTGATGCCGATATCATTGTGGAGGGAATTCCGGTGAAAATTCATCGGTGCATTCTAGGTTCTAGGAGTAAGTTTTTCCATGAAATATTTAAGAGGGGTAAAGATAAAGGATTGTCGAAGAATGAAGGGAAATTGAAGTATTGTTTGAGCGATTTGTTGCCTTATGGCAAAGTTGGTTATGAAGCTTTTCTTATATTCTTGAGCTATGCATATAGTGGTAAACTTAAACCCTCTCCAATGGAGGTGTCTACATGTGTTGATAATGTTTGTGCTCATGATGCTTGCGGACCTGCAATTAATTTTGCTGTGGAGTTAATGTATGCCTCTTCCATTTTTCAAATACCAGAGTTGGTATCACTTTTCCAGGTAAACATTATATCTATGATGATAGTTATGAATCTGTCACAAGAAACATACAATTCAATGTCTATTGTTAGTTAGACGTACGGAACACGTATTGTATCCGGGATCCCGGATGACAGTTGCGTCTTTAGTTGGTAAAAAGCATTGAAGATGTATTTGAGAAGTATTGGTGAAAATACATATTTTTTAAAATAATATATATTATTATCAGATACTTTTTGGACACGTATCGGGAAGTATGAGATGCTTATCAGTATCCGATATGTGTCGGTCGGTGCTCTTTTATTTTTGAAGTATTTGGGCTTCATAGCTGCTACTTGACCCCCACTTGAACATTTTTCTATATGTCCTTTCTGTTTTCTCTATATTATGAAATTTAGTTCAAGTTTAGGAATAATTAATTATCTGTTAGGCTATTGTCATGTTCTATGCCAAGATGTTTTGTATGATGATTCAGAACATGGGAAGAGGTTTCATATATCTAGCAAGTAGTAGTGCGTGCTTCAATATAAATGATTTCCTTTTCCAAAACAAATTTCTTACTATACATGTATTATTGTTGATTGAATACAACTTTTACTTTTGTTGATTTTGAAGGGATTTGAAATTAAACTCTATGATCAATACGCCATATATCTTGCTTTCTTTAGGCATAATTGGCATCTTATGTTGGGCATATTTGGAAAATTGCAAACTAATTTCACATCTGAATTACTAGTCATATTGTATCTGATCAAGGTTAAGGATTGAGAAACTAAGTATTACTTCAAATTTTGCAGAGACGTCTTCTTAACTTTGTAGGGAAGGCTCTTGTGGAAGATGTCATTTCAATCCTCATGGTTGCTTTCCATTGTCAATTGAATCAACTCGTTGCCCAATGTGTTGACAGAGTGGCACGATCGGACCTTGACCAGATCTCAATTGAGAAAGAGCTTCCCCATGAGCTCTCAGAAAAAGTTAAATTGCTCCGCCGCGACCTTCATCAGGATGATGAAAACGATGCTCCTGTAGTGGACACTTTGTCCCTAAAACGAATCACTAGAATTCACAAGGCATTGGACTCAGACGACGTCGAGCTTGTTAAACTTCTTTTAAACGAGTCAGACATTACTTTAGATGAAGCTGGTGCTCTCCACTATGCAGTAGCCCACTGTGACCCTAAGGTTGTTTCTGAAGTTCTTGGATTGGGTTTGGCTAATGTCAATCTTCGGAATTCTCGAGGGTATACAGTGCTTCACATTGCTGCCATGCGTAAGGAGCCTTCAATTATAGTATCGCTTCTTACGAAAGGGGCTTGTGCATCGGATTTGACTTTCGATGGTCAGAGTGCTGTTAGTATTTGTAGGAGGTTGACGAGGCCAAAGGATTATCACACAAAAACAGAACAGGGGAAAGAAACAAATAAAGACCGGATATGCATTGATGTTCTTGAAAGAGAAATGCGAAGGAATCCTTTGGCTACAGATCCCTCTGTGTCTTCCCACACAGTGGCTGATGATCTCCACATGAAGCTTTTGTACCTTGAGAACAGAGGTATGGTGATATTCCTTCAACTTCTTGCTTATGTTCCATATATTGTTGTCGTGGATCAAGCTTCGAGGATTTTAAATGCTTCGTTTCCATGCCTTTGAATGGAAATTTCCCAAAACTGAGTCATTTTGTTTTCATACTTCTTTTTGTGTATATTTCTATTTTACTTTGTATTTGATCAGTGTGATCCTTGCTTCCCATTTTGGAGTTTTTTTGTTTGTGAAAAATGCCACTCGGAAGAACCACTTAAAATTTATGGGTTTCGATTGTGTTCTTTAACTCCTTGTGCAACTGGACCTCGGAAAGCTGACCATTGGATTTGCCAGCTTTATTGATTTTCACGGTAACAGTTTTGACACCAACTTTATGTAATTTTGAACTCAGAGAATTTAGATAGTTCTGGAAATGTAAGGCTGGAATTTGGAAGTGGTTGGATTCACAAGTTACCGCATTAGGGTGTAGAGTTCTAAAGTTTCATCTAGCAAAAGGAATTCAGGCGCAAACAAAGGGCCAATTTTCTGCTGAAGGTTTTAATTCCCTTGCGAGTGATTAGGATTTGCTGTTGCATTACGAAGAGGTCACACGTTTGAGTTATGGTATTAGCGTCCTTTAATTGCAAGGTAAGATTGTTTACACAATAGATCAAACCTGTGACCTCTTCGTCATGTACCATGGAAGGAGCTTTATAGTAACAGGTTGCTGTTTTTAGGGTTCTTGCTCCTTGGTCATTGGATTCACCTTAGGAAAATATTGTTTAAAATAAAAAGTTGAGATGTAGAAAAGTGCAAGCATTTTACTCTGAATATAGCTTAGAGCATGAAAGGGAGAAGGAAGAAGTCTTAACTGAGTAAGGAAGAAGTCAAACTCATACCATCTGTCTTCACTGATTAAGGAGTTTGAGTGAGCACTCAGTGAAAAGGATTAGGAAAGCTCGTCCATACTTGTTCTTGCTCCAGCTCTCAGATTAGGAGCAACTGATCTTATAGAGGAAGAAGTTCTTGATGCTTTTGGACGTCTTTCACAAACGCTACCAGCATCGATTTTGCCTTGTTTCATTTGTAGCTAAATGCCAGAGAGATTTTCATGTTGACTTGAATAATTTCTTAATTCCAGTTTTAATTAAAAAAAAATAAGAAATGATATTTTTTAAAAGAAGCGCTGAGACCACCTTCATATGGCTGAAAAATTCAGGAGCTAGTTTCTATAAAACCTTTTTTTTTTTTTTTTTTAAATTTTCTGTTTCAGGCCTGTCTTGTTTATGCTGGTATTTCATTCTCTTAATAAATATGATGTTTGACTTCTTTTTGAATGTTATGTTCAACTGATTTACTATGTTTGTGTTGGTTTTTTATTCTCAAAAACCATCAAATAATAAGCATTGCTGTCTGCTGCAGTGGCATTTGCCAGACTATTTTTCCCTTTGGAAGCCAAATTAGCCATGGACATTGCACGTGCAGAGACAACATCCGAGTTTGCTGGTCTTTCGGCATCAAAAGGTTCAAACGGAAACTTAAGGGAGGTTGATCTCAATGAAACTCCCATAATGCAAAACAAGAGACTTATTTCTAGGATGGAGGCCCTGATGAAAACAGGTAATTGCAATCTTTTGCTATTTAATAGTATCCTCTTGTGGTCACGGCGATTTCCAATGGAATCGCGGGGCAGCAGGTGACTTCTCTATAACGATGTGGATTCGGTTAACTCTGGGTTTATACGGTTAGAGAAGCCATCTGATTCTCTGATTGATTTCAACTGTCTTTAGTTTTGATTAGATTTCGCTTTATTTATCCATGTTTCTATGTACAATTCTAAGTCTTACTGTCTTCAATGTTCTTATGTGGTGGGTGTCAGTCGAGATGGGGCGGCGCTACTTTCCTAATTGCTCGGAAGTGCTCGACAAGTTCATGGAGGATGACCTACCTGATTTGTTTTACCTTGAGAAGGGCACCCAAGAAGAGCAAAGAGTCAAGAGGACGAGATTCGTTGAGCTTAAAGATGATGTCAACAAGGCTTTCAGCAAAGACAAAGCTGAGTTTAGTCGCTCTGGGATTTCATCTTCATCATCCTCTTCATCCCTTAGAGAGTCTGTATGTTACAAGGCTAGAAAAATGTGA
Protein sequence

>MS.gene003232.t1

MANSAEPSLSNNTSSSHLSNGSISHNICPNGSDHARNLEVISLNKLSSNLEQLLIDSDYDYGDADIIVEGIPVKIHRCILGSRSKFFHEIFKRGKDKGLSKNEGKLKYCLSDLLPYGKVGYEAFLIFLSYAYSGKLKPSPMEVSTCVDNVCAHDACGPAINFAVELMYASSIFQIPELVSLFQRRLLNFVGKALVEDVISILMVAFHCQLNQLVAQCVDRVARSDLDQISIEKELPHELSEKVKLLRRDLHQDDENDAPVVDTLSLKRITRIHKALDSDDVELVKLLLNESDITLDEAGALHYAVAHCDPKVVSEVLGLGLANVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACASDLTFDGQSAVSICRRLTRPKDYHTKTEQGKETNKDRICIDVLEREMRRNPLATDPSVSSHTVADDLHMKLLYLENRVAFARLFFPLEAKLAMDIARAETTSEFAGLSASKGSNGNLREVDLNETPIMQNKRLISRMEALMKTVEMGRRYFPNCSEVLDKFMEDDLPDLFYLEKGTQEEQRVKRTRFVELKDDVNKAFSKDKAEFSRSGISSSSSSSSLRESVCYKARKM