Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00332.t1 | XP_013463290.1 | 68.6 | 331 | 67 | 2 | 1 | 294 | 82 | 412 | 6.20E-103 | 384 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00332.t1 | A0A072V6R1 | 68.6 | 331 | 67 | 2 | 1 | 294 | 82 | 412 | 4.5e-103 | 384.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene00332.t1 | TR | mTERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00332.t1 | MTR_2g437240 | 68.580 | 331 | 67 | 1 | 1 | 294 | 82 | 412 | 1.85e-156 | 443 |
MS.gene00332.t1 | MTR_2g437960 | 74.227 | 291 | 73 | 1 | 4 | 292 | 108 | 398 | 1.84e-155 | 440 |
MS.gene00332.t1 | MTR_2g437960 | 74.227 | 291 | 73 | 1 | 4 | 292 | 108 | 398 | 2.10e-155 | 441 |
MS.gene00332.t1 | MTR_2g437170 | 71.477 | 298 | 81 | 2 | 4 | 297 | 110 | 407 | 1.13e-148 | 423 |
MS.gene00332.t1 | MTR_2g437200 | 68.139 | 317 | 64 | 1 | 1 | 280 | 82 | 398 | 2.07e-147 | 419 |
MS.gene00332.t1 | MTR_2g438020 | 66.465 | 331 | 73 | 2 | 1 | 294 | 121 | 450 | 3.92e-146 | 420 |
MS.gene00332.t1 | MTR_2g437150 | 70.307 | 293 | 83 | 2 | 4 | 292 | 110 | 402 | 4.37e-145 | 414 |
MS.gene00332.t1 | MTR_2g437120 | 73.883 | 291 | 73 | 2 | 4 | 292 | 106 | 395 | 1.18e-144 | 413 |
MS.gene00332.t1 | MTR_2g437990 | 72.014 | 293 | 79 | 2 | 4 | 294 | 105 | 396 | 3.06e-144 | 412 |
MS.gene00332.t1 | MTR_2g076320 | 70.890 | 292 | 83 | 1 | 5 | 294 | 106 | 397 | 1.87e-142 | 407 |
MS.gene00332.t1 | MTR_2g438010 | 68.259 | 293 | 91 | 1 | 4 | 294 | 125 | 417 | 9.81e-141 | 403 |
MS.gene00332.t1 | MTR_2g437180 | 70.790 | 291 | 81 | 2 | 4 | 292 | 104 | 392 | 1.50e-140 | 402 |
MS.gene00332.t1 | MTR_2g437100 | 71.731 | 283 | 76 | 2 | 4 | 282 | 115 | 397 | 1.42e-139 | 400 |
MS.gene00332.t1 | MTR_2g437160 | 68.475 | 295 | 90 | 2 | 4 | 296 | 118 | 411 | 3.49e-139 | 399 |
MS.gene00332.t1 | MTR_2g437940 | 66.212 | 293 | 69 | 2 | 4 | 294 | 104 | 368 | 4.51e-125 | 362 |
MS.gene00332.t1 | MTR_2g437130 | 62.925 | 294 | 104 | 2 | 1 | 292 | 93 | 383 | 5.12e-125 | 362 |
MS.gene00332.t1 | MTR_2g437080 | 51.712 | 292 | 136 | 2 | 1 | 290 | 92 | 380 | 4.39e-102 | 303 |
MS.gene00332.t1 | MTR_2g437060 | 52.069 | 290 | 134 | 3 | 1 | 288 | 107 | 393 | 4.52e-100 | 299 |
MS.gene00332.t1 | MTR_2g437020 | 53.425 | 292 | 128 | 4 | 1 | 288 | 91 | 378 | 7.34e-100 | 298 |
MS.gene00332.t1 | MTR_2g436440 | 51.877 | 293 | 135 | 3 | 2 | 292 | 100 | 388 | 2.07e-99 | 297 |
MS.gene00332.t1 | MTR_2g437040 | 49.831 | 295 | 143 | 2 | 1 | 293 | 92 | 383 | 7.54e-96 | 288 |
MS.gene00332.t1 | MTR_2g437260 | 47.766 | 291 | 145 | 4 | 1 | 287 | 86 | 373 | 5.58e-91 | 276 |
MS.gene00332.t1 | MTR_4g119550 | 48.454 | 291 | 144 | 3 | 1 | 288 | 101 | 388 | 1.03e-90 | 275 |
MS.gene00332.t1 | MTR_2g437030 | 48.805 | 293 | 144 | 3 | 2 | 292 | 180 | 468 | 1.90e-90 | 277 |
MS.gene00332.t1 | MTR_2g437160 | 70.745 | 188 | 55 | 0 | 109 | 296 | 133 | 320 | 4.32e-89 | 268 |
MS.gene00332.t1 | MTR_2g436400 | 47.902 | 286 | 144 | 3 | 1 | 284 | 99 | 381 | 1.13e-88 | 270 |
MS.gene00332.t1 | MTR_2g436460 | 49.470 | 283 | 137 | 4 | 1 | 280 | 97 | 376 | 1.57e-82 | 254 |
MS.gene00332.t1 | MTR_4g119580 | 44.523 | 283 | 146 | 3 | 1 | 278 | 94 | 370 | 7.63e-75 | 234 |
MS.gene00332.t1 | MTR_4g120380 | 43.929 | 280 | 152 | 2 | 1 | 278 | 94 | 370 | 5.30e-74 | 231 |
MS.gene00332.t1 | MTR_4g120380 | 42.960 | 277 | 144 | 3 | 1 | 275 | 94 | 358 | 1.55e-68 | 219 |
MS.gene00332.t1 | MTR_2g019840 | 42.955 | 291 | 153 | 7 | 1 | 285 | 93 | 376 | 2.83e-65 | 209 |
MS.gene00332.t1 | MTR_2g019810 | 44.211 | 285 | 148 | 6 | 1 | 280 | 81 | 359 | 2.66e-64 | 206 |
MS.gene00332.t1 | MTR_2g437090 | 55.488 | 164 | 73 | 0 | 123 | 286 | 1 | 164 | 2.75e-59 | 187 |
MS.gene00332.t1 | MTR_4g119570 | 37.903 | 248 | 112 | 3 | 34 | 278 | 21 | 229 | 5.95e-50 | 165 |
MS.gene00332.t1 | MTR_3g450500 | 30.466 | 279 | 189 | 3 | 5 | 278 | 92 | 370 | 1.13e-39 | 142 |
MS.gene00332.t1 | MTR_4g007490 | 29.825 | 285 | 190 | 5 | 1 | 278 | 87 | 368 | 2.96e-33 | 125 |
MS.gene00332.t1 | MTR_8g080990 | 28.058 | 278 | 194 | 4 | 1 | 274 | 93 | 368 | 8.11e-27 | 108 |
MS.gene00332.t1 | MTR_8g081000 | 25.887 | 282 | 203 | 3 | 1 | 278 | 106 | 385 | 6.26e-26 | 106 |
MS.gene00332.t1 | MTR_8g081000 | 25.887 | 282 | 203 | 3 | 1 | 278 | 106 | 385 | 6.47e-26 | 106 |
MS.gene00332.t1 | MTR_8g081000 | 25.887 | 282 | 203 | 3 | 1 | 278 | 106 | 385 | 9.93e-26 | 105 |
MS.gene00332.t1 | MTR_3g085240 | 55.556 | 90 | 23 | 1 | 182 | 271 | 176 | 248 | 2.82e-22 | 93.6 |
MS.gene00332.t1 | MTR_2g436380 | 56.667 | 60 | 26 | 0 | 123 | 182 | 1 | 60 | 1.73e-16 | 78.2 |
MS.gene00332.t1 | MTR_2g436370 | 41.573 | 89 | 49 | 2 | 1 | 87 | 98 | 185 | 6.15e-15 | 72.4 |
MS.gene00332.t1 | MTR_2g019830 | 52.564 | 78 | 34 | 2 | 210 | 285 | 128 | 204 | 6.47e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00332.t1 | AT5G07900 | 32.624 | 282 | 185 | 3 | 1 | 277 | 118 | 399 | 5.47e-46 | 160 |
MS.gene00332.t1 | AT1G21150 | 30.000 | 280 | 191 | 3 | 3 | 277 | 71 | 350 | 6.38e-33 | 124 |
MS.gene00332.t1 | AT1G21150 | 30.000 | 280 | 191 | 3 | 3 | 277 | 107 | 386 | 1.37e-32 | 124 |
MS.gene00332.t1 | AT1G21150 | 30.000 | 280 | 191 | 3 | 3 | 277 | 171 | 450 | 3.38e-32 | 124 |
MS.gene00332.t1 | AT5G64950 | 25.818 | 275 | 194 | 4 | 5 | 269 | 92 | 366 | 6.88e-22 | 94.7 |
MS.gene00332.t1 | AT1G61980 | 26.645 | 304 | 177 | 7 | 1 | 263 | 101 | 399 | 7.05e-22 | 95.1 |
MS.gene00332.t1 | AT1G61980 | 26.645 | 304 | 177 | 7 | 1 | 263 | 101 | 399 | 7.05e-22 | 95.1 |
MS.gene00332.t1 | AT1G61980 | 26.645 | 304 | 177 | 7 | 1 | 263 | 101 | 399 | 7.05e-22 | 95.1 |
MS.gene00332.t1 | AT1G61990 | 25.890 | 309 | 178 | 6 | 1 | 268 | 101 | 399 | 3.45e-21 | 93.2 |
MS.gene00332.t1 | AT1G61990 | 25.890 | 309 | 178 | 6 | 1 | 268 | 101 | 399 | 3.45e-21 | 93.2 |
MS.gene00332.t1 | AT1G62120 | 27.338 | 278 | 163 | 5 | 1 | 240 | 105 | 381 | 2.34e-19 | 88.2 |
MS.gene00332.t1 | AT1G61970 | 25.658 | 304 | 180 | 8 | 1 | 263 | 101 | 399 | 5.54e-19 | 87.0 |
MS.gene00332.t1 | AT1G61970 | 25.658 | 304 | 180 | 8 | 1 | 263 | 101 | 399 | 5.54e-19 | 87.0 |
MS.gene00332.t1 | AT1G61970 | 25.658 | 304 | 180 | 8 | 1 | 263 | 101 | 399 | 5.54e-19 | 87.0 |
MS.gene00332.t1 | AT1G61970 | 25.658 | 304 | 180 | 8 | 1 | 263 | 101 | 399 | 5.54e-19 | 87.0 |
MS.gene00332.t1 | AT1G61970 | 25.658 | 304 | 180 | 8 | 1 | 263 | 101 | 399 | 5.54e-19 | 87.0 |
MS.gene00332.t1 | AT1G61970 | 25.658 | 304 | 180 | 8 | 1 | 263 | 101 | 399 | 5.54e-19 | 87.0 |
MS.gene00332.t1 | AT1G61970 | 25.658 | 304 | 180 | 8 | 1 | 263 | 101 | 399 | 5.54e-19 | 87.0 |
MS.gene00332.t1 | AT1G62010 | 25.180 | 278 | 165 | 5 | 1 | 240 | 87 | 359 | 5.90e-17 | 80.9 |
MS.gene00332.t1 | AT1G61960 | 23.677 | 359 | 195 | 10 | 1 | 282 | 101 | 457 | 9.59e-17 | 80.5 |
MS.gene00332.t1 | AT3G46950 | 27.136 | 199 | 133 | 4 | 1 | 195 | 101 | 291 | 2.36e-15 | 76.3 |
Find 49 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCCTTCATTGGCTACTTT+TGG | 0.136382 | 2.1:-56131430 | MS.gene00332:CDS |
GATGTTGTTTCTTGCTTAAT+TGG | 0.154405 | 2.1:-56131628 | MS.gene00332:CDS |
TTAATTTGGTGATGAGATTT+TGG | 0.155421 | 2.1:-56131261 | MS.gene00332:CDS |
GTCAATTTGATGGCTGATTT+TGG | 0.160399 | 2.1:-56131556 | MS.gene00332:CDS |
TTCAATTGATAAGATTAATT+TGG | 0.211307 | 2.1:-56131275 | MS.gene00332:CDS |
TTGGAGGAAGTTAAAAGTTT+AGG | 0.232815 | 2.1:-56131457 | MS.gene00332:CDS |
TGGAGGAAGTTAAAAGTTTA+GGG | 0.262010 | 2.1:-56131456 | MS.gene00332:CDS |
ATTGAAGTCAACATCAAATT+AGG | 0.302705 | 2.1:+56131292 | None:intergenic |
TTTGTTATAGTTTACATAAA+AGG | 0.315414 | 2.1:-56131186 | MS.gene00332:CDS |
TCCTTTGAACAAAATATAGA+TGG | 0.321886 | 2.1:+56131493 | None:intergenic |
AAAGGATTTGATTAAGTCAT+TGG | 0.323129 | 2.1:-56131476 | MS.gene00332:CDS |
AAACTGTTATTCGAGTATTT+AGG | 0.326795 | 2.1:-56131321 | MS.gene00332:CDS |
TTAAAGCTATATGAAGAAAA+AGG | 0.334172 | 2.1:-56131016 | MS.gene00332:CDS |
AAGCTACTTCGCAAAATTGT+AGG | 0.340941 | 2.1:+56131709 | None:intergenic |
AACAATATCAGAAGCACCTT+TGG | 0.368277 | 2.1:+56131750 | None:intergenic |
AAGTCGATGTCTTTAAGAAA+TGG | 0.372668 | 2.1:-56131357 | MS.gene00332:CDS |
ATTAGCCACAATAAGGTGAT+AGG | 0.374098 | 2.1:+56131579 | None:intergenic |
AGTCGATGTCTTTAAGAAAT+GGG | 0.374511 | 2.1:-56131356 | MS.gene00332:CDS |
TGATTAGTAAATTACACATT+TGG | 0.384526 | 2.1:+56130953 | None:intergenic |
GCAAGAAACAACATCCTTGT+TGG | 0.393367 | 2.1:+56131636 | None:intergenic |
TTTAGGGTTTCATCCTTCAT+TGG | 0.395115 | 2.1:-56131440 | MS.gene00332:CDS |
AATTGACATTAGCCACAATA+AGG | 0.395523 | 2.1:+56131572 | None:intergenic |
TTGGGTCAATCAATTGGGTT+GGG | 0.410554 | 2.1:-56131242 | MS.gene00332:CDS |
TCAATTGGGTTGGGATTCCT+TGG | 0.411639 | 2.1:-56131233 | MS.gene00332:CDS |
TGTGGCTAATGTCAATTTGA+TGG | 0.420465 | 2.1:-56131566 | MS.gene00332:CDS |
TTCAGCTTTAAGGAGGAGTC+TGG | 0.429619 | 2.1:-56131046 | MS.gene00332:CDS |
TGCTTAATTGGATATTCGAC+TGG | 0.431141 | 2.1:-56131616 | MS.gene00332:CDS |
AAACTATAACAAAACATTTG+TGG | 0.448851 | 2.1:+56131196 | None:intergenic |
CTGCAATTTCTTGTGATGAA+AGG | 0.456099 | 2.1:-56131142 | MS.gene00332:CDS |
TTTCCTGCAATACCCACAAA+AGG | 0.474534 | 2.1:-56131801 | MS.gene00332:CDS |
TTTGGGTCAATCAATTGGGT+TGG | 0.485642 | 2.1:-56131243 | MS.gene00332:CDS |
AGCTACTTCGCAAAATTGTA+GGG | 0.505831 | 2.1:+56131710 | None:intergenic |
ATTGCTTTGGCAGCCAAGAA+AGG | 0.515077 | 2.1:-56131406 | MS.gene00332:CDS |
TACATAAAAGGATCATTCCA+AGG | 0.520767 | 2.1:-56131174 | MS.gene00332:CDS |
AATTGCAGAACTGAGGCCCT+TGG | 0.530422 | 2.1:+56131157 | None:intergenic |
ATCCCAAAAGTAGCCAATGA+AGG | 0.538329 | 2.1:+56131427 | None:intergenic |
TTAGCCACAATAAGGTGATA+GGG | 0.566024 | 2.1:+56131580 | None:intergenic |
GGATTTGATTAAGTCATTGG+AGG | 0.571043 | 2.1:-56131473 | MS.gene00332:CDS |
GTCGATGTCTTTAAGAAATG+GGG | 0.573187 | 2.1:-56131355 | MS.gene00332:CDS |
TGGACATTTAGTAAGTGCCA+AGG | 0.586798 | 2.1:+56131216 | None:intergenic |
ACATAAAAGGATCATTCCAA+GGG | 0.612722 | 2.1:-56131173 | MS.gene00332:CDS |
GAAACCCTATCACCTTATTG+TGG | 0.621156 | 2.1:-56131584 | MS.gene00332:CDS |
ATGTCTTTAAGAAATGGGGT+TGG | 0.647050 | 2.1:-56131351 | MS.gene00332:CDS |
CACAAGAAATTGCAGAACTG+AGG | 0.656909 | 2.1:+56131150 | None:intergenic |
GCAAACACAAAGGAGAACAA+TGG | 0.674249 | 2.1:-56130986 | MS.gene00332:CDS |
AGGTAAACTTGCAAACACAA+AGG | 0.676825 | 2.1:-56130996 | MS.gene00332:CDS |
GTATTGCAGGAAAGAATCCA+CGG | 0.696647 | 2.1:+56131811 | None:intergenic |
TAGGTTCTTTAAAACCAACA+AGG | 0.702489 | 2.1:-56131650 | MS.gene00332:CDS |
ACATCATTAAAACAGAACCG+TGG | 0.717103 | 2.1:-56131828 | MS.gene00332:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTCAATTGATAAGATTAATT+TGG | - | chr2.1:56131524-56131543 | MS.gene00332:CDS | 15.0% |
!!! | TTTGTTATAGTTTACATAAA+AGG | - | chr2.1:56131613-56131632 | MS.gene00332:CDS | 15.0% |
!! | AAACTATAACAAAACATTTG+TGG | + | chr2.1:56131606-56131625 | None:intergenic | 20.0% |
!! | AAGGTATAAGTAAAAAACTT+TGG | - | chr2.1:56131412-56131431 | MS.gene00332:CDS | 20.0% |
!! | AGAGTAAAAATTGAAACTTT+GGG | + | chr2.1:56131029-56131048 | None:intergenic | 20.0% |
!! | AGGTATAAGTAAAAAACTTT+GGG | - | chr2.1:56131413-56131432 | MS.gene00332:CDS | 20.0% |
!! | TAGTTAACAATTGAAAAAGA+GGG | + | chr2.1:56131131-56131150 | None:intergenic | 20.0% |
!! | TTAAAGCTATATGAAGAAAA+AGG | - | chr2.1:56131783-56131802 | MS.gene00332:CDS | 20.0% |
!!! | TTTTTTACTTATACCTTTCT+TGG | + | chr2.1:56131409-56131428 | None:intergenic | 20.0% |
! | AAACTGTTATTCGAGTATTT+AGG | - | chr2.1:56131478-56131497 | MS.gene00332:CDS | 25.0% |
! | AAAGGATTTGATTAAGTCAT+TGG | - | chr2.1:56131323-56131342 | MS.gene00332:CDS | 25.0% |
! | AGTTAACAATTGAAAAAGAG+GGG | + | chr2.1:56131130-56131149 | None:intergenic | 25.0% |
! | ATTGAAGTCAACATCAAATT+AGG | + | chr2.1:56131510-56131529 | None:intergenic | 25.0% |
! | CTAGTTAACAATTGAAAAAG+AGG | + | chr2.1:56131132-56131151 | None:intergenic | 25.0% |
! | GAGAGTAAAAATTGAAACTT+TGG | + | chr2.1:56131030-56131049 | None:intergenic | 25.0% |
! | TCCTTTGAACAAAATATAGA+TGG | + | chr2.1:56131309-56131328 | None:intergenic | 25.0% |
!! | ACCATCTATATTTTGTTCAA+AGG | - | chr2.1:56131305-56131324 | MS.gene00332:CDS | 25.0% |
!! | TTTCAATTTTTACTCTCCAA+AGG | - | chr2.1:56131033-56131052 | MS.gene00332:CDS | 25.0% |
!!! | CTCTTTTTCAATTGTTAACT+AGG | - | chr2.1:56131130-56131149 | MS.gene00332:CDS | 25.0% |
!!! | TAATTTGGTGATGAGATTTT+GGG | - | chr2.1:56131539-56131558 | MS.gene00332:CDS | 25.0% |
!!! | TTAATTTGGTGATGAGATTT+TGG | - | chr2.1:56131538-56131557 | MS.gene00332:CDS | 25.0% |
AATTGACATTAGCCACAATA+AGG | + | chr2.1:56131230-56131249 | None:intergenic | 30.0% | |
ACATAAAAGGATCATTCCAA+GGG | - | chr2.1:56131626-56131645 | MS.gene00332:CDS | 30.0% | |
TACATAAAAGGATCATTCCA+AGG | - | chr2.1:56131625-56131644 | MS.gene00332:CDS | 30.0% | |
TGGAGGAAGTTAAAAGTTTA+GGG | - | chr2.1:56131343-56131362 | MS.gene00332:CDS | 30.0% | |
TTGGAGGAAGTTAAAAGTTT+AGG | - | chr2.1:56131342-56131361 | MS.gene00332:CDS | 30.0% | |
! | AAGTCGATGTCTTTAAGAAA+TGG | - | chr2.1:56131442-56131461 | MS.gene00332:CDS | 30.0% |
! | AGTCGATGTCTTTAAGAAAT+GGG | - | chr2.1:56131443-56131462 | MS.gene00332:CDS | 30.0% |
!! | AGATTTTGGGTCAATCAATT+GGG | - | chr2.1:56131552-56131571 | MS.gene00332:CDS | 30.0% |
!! | GAAGTTTGTTTTCAGCTTTA+AGG | - | chr2.1:56131743-56131762 | MS.gene00332:CDS | 30.0% |
!! | GATGTTGTTTCTTGCTTAAT+TGG | - | chr2.1:56131171-56131190 | MS.gene00332:CDS | 30.0% |
!! | TAGGTTCTTTAAAACCAACA+AGG | - | chr2.1:56131149-56131168 | MS.gene00332:CDS | 30.0% |
AAGCTACTTCGCAAAATTGT+AGG | + | chr2.1:56131093-56131112 | None:intergenic | 35.0% | |
ACATCATTAAAACAGAACCG+TGG | - | chr2.1:56130971-56130990 | MS.gene00332:CDS | 35.0% | |
AGCTACTTCGCAAAATTGTA+GGG | + | chr2.1:56131092-56131111 | None:intergenic | 35.0% | |
AGGTAAACTTGCAAACACAA+AGG | - | chr2.1:56131803-56131822 | MS.gene00332:CDS | 35.0% | |
ATTAGCCACAATAAGGTGAT+AGG | + | chr2.1:56131223-56131242 | None:intergenic | 35.0% | |
CTGCAATTTCTTGTGATGAA+AGG | - | chr2.1:56131657-56131676 | MS.gene00332:CDS | 35.0% | |
GGATTTGATTAAGTCATTGG+AGG | - | chr2.1:56131326-56131345 | MS.gene00332:CDS | 35.0% | |
TGCTTAATTGGATATTCGAC+TGG | - | chr2.1:56131183-56131202 | MS.gene00332:CDS | 35.0% | |
TGTGGCTAATGTCAATTTGA+TGG | - | chr2.1:56131233-56131252 | MS.gene00332:CDS | 35.0% | |
TTAGCCACAATAAGGTGATA+GGG | + | chr2.1:56131222-56131241 | None:intergenic | 35.0% | |
! | ATGTCTTTAAGAAATGGGGT+TGG | - | chr2.1:56131448-56131467 | MS.gene00332:CDS | 35.0% |
! | GTCGATGTCTTTAAGAAATG+GGG | - | chr2.1:56131444-56131463 | MS.gene00332:CDS | 35.0% |
! | TACAATTTTGCGAAGTAGCT+TGG | - | chr2.1:56131092-56131111 | MS.gene00332:CDS | 35.0% |
! | TTTAGGGTTTCATCCTTCAT+TGG | - | chr2.1:56131359-56131378 | MS.gene00332:CDS | 35.0% |
!! | AACAATATCAGAAGCACCTT+TGG | + | chr2.1:56131052-56131071 | None:intergenic | 35.0% |
!! | GAGATTTTGGGTCAATCAAT+TGG | - | chr2.1:56131551-56131570 | MS.gene00332:CDS | 35.0% |
!! | GTCAATTTGATGGCTGATTT+TGG | - | chr2.1:56131243-56131262 | MS.gene00332:CDS | 35.0% |
!!! | ATCCTTCATTGGCTACTTTT+GGG | - | chr2.1:56131370-56131389 | MS.gene00332:CDS | 35.0% |
!!! | GTTTGTTTTCAGCTTTAAGG+AGG | - | chr2.1:56131746-56131765 | MS.gene00332:CDS | 35.0% |
ATCCCAAAAGTAGCCAATGA+AGG | + | chr2.1:56131375-56131394 | None:intergenic | 40.0% | |
CACAAGAAATTGCAGAACTG+AGG | + | chr2.1:56131652-56131671 | None:intergenic | 40.0% | |
CGAAAAAAGAATGCGAGCTT+AGG | - | chr2.1:56131684-56131703 | MS.gene00332:CDS | 40.0% | |
GAAACCCTATCACCTTATTG+TGG | - | chr2.1:56131215-56131234 | MS.gene00332:CDS | 40.0% | |
GCAAACACAAAGGAGAACAA+TGG | - | chr2.1:56131813-56131832 | MS.gene00332:CDS | 40.0% | |
GCAAGAAACAACATCCTTGT+TGG | + | chr2.1:56131166-56131185 | None:intergenic | 40.0% | |
GTATTGCAGGAAAGAATCCA+CGG | + | chr2.1:56130991-56131010 | None:intergenic | 40.0% | |
TGGACATTTAGTAAGTGCCA+AGG | + | chr2.1:56131586-56131605 | None:intergenic | 40.0% | |
TTGGGTCAATCAATTGGGTT+GGG | - | chr2.1:56131557-56131576 | MS.gene00332:CDS | 40.0% | |
TTTCCTGCAATACCCACAAA+AGG | - | chr2.1:56130998-56131017 | MS.gene00332:CDS | 40.0% | |
TTTGGGTCAATCAATTGGGT+TGG | - | chr2.1:56131556-56131575 | MS.gene00332:CDS | 40.0% | |
!! | AATCCTTTTGTGGGTATTGC+AGG | + | chr2.1:56131004-56131023 | None:intergenic | 40.0% |
!! | ACTTTGGGAGAATCCTTTTG+TGG | + | chr2.1:56131014-56131033 | None:intergenic | 40.0% |
!! | CATCCTTCATTGGCTACTTT+TGG | - | chr2.1:56131369-56131388 | MS.gene00332:CDS | 40.0% |
!! | CTTTGGGAGAATCCTTTTGT+GGG | + | chr2.1:56131013-56131032 | None:intergenic | 40.0% |
ATTGCTTTGGCAGCCAAGAA+AGG | - | chr2.1:56131393-56131412 | MS.gene00332:CDS | 45.0% | |
!! | TCAATTGGGTTGGGATTCCT+TGG | - | chr2.1:56131566-56131585 | MS.gene00332:CDS | 45.0% |
!! | TTCAGCTTTAAGGAGGAGTC+TGG | - | chr2.1:56131753-56131772 | MS.gene00332:CDS | 45.0% |
!!! | GGCTACTTTTGGGATTGCTT+TGG | - | chr2.1:56131380-56131399 | MS.gene00332:CDS | 45.0% |
AATTGCAGAACTGAGGCCCT+TGG | + | chr2.1:56131645-56131664 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 56130964 | 56131857 | 56130964 | ID=MS.gene00332 |
chr2.1 | mRNA | 56130964 | 56131857 | 56130964 | ID=MS.gene00332.t1;Parent=MS.gene00332 |
chr2.1 | exon | 56130964 | 56131857 | 56130964 | ID=MS.gene00332.t1.exon1;Parent=MS.gene00332.t1 |
chr2.1 | CDS | 56130964 | 56131857 | 56130964 | ID=cds.MS.gene00332.t1;Parent=MS.gene00332.t1 |
Gene Sequence |
Protein sequence |