AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003330.t1 MTR_2g030660 47.339 714 295 13 8 707 3 649 0.0 597
MS.gene003330.t1 MTR_2g030570 36.179 738 399 18 1 707 1 697 1.60e-134 412
MS.gene003330.t1 MTR_6g477820 34.848 726 400 21 22 705 29 723 1.39e-128 398
MS.gene003330.t1 MTR_2g030600 33.684 760 381 22 1 707 1 690 2.64e-119 373
MS.gene003330.t1 MTR_4g047800 32.882 739 419 22 1 705 34 729 2.57e-110 350
MS.gene003330.t1 MTR_8g432540 31.599 769 377 23 7 701 101 794 2.90e-101 329
MS.gene003330.t1 MTR_7g427710 35.392 599 322 17 140 705 72 638 1.49e-97 314
MS.gene003330.t1 MTR_7g427710 41.322 121 56 2 22 140 17 124 2.70e-21 99.4
MS.gene003330.t1 MTR_7g076080 30.719 765 381 25 7 701 77 762 1.76e-97 318
MS.gene003330.t1 MTR_5g029320 32.258 651 387 18 22 653 89 704 1.58e-95 313
MS.gene003330.t1 MTR_2g088470 32.114 629 367 14 129 705 112 732 1.19e-92 304
MS.gene003330.t1 MTR_2g088470 36.306 157 90 4 1 149 41 195 6.48e-21 98.2
MS.gene003330.t1 MTR_2g101720 30.423 710 399 21 27 705 144 789 6.21e-91 301
MS.gene003330.t1 MTR_1g101280 27.356 764 406 18 22 705 56 750 3.46e-83 279
MS.gene003330.t1 MTR_0198s0030 30.422 664 395 18 27 660 60 686 1.40e-82 278
MS.gene003330.t1 MTR_5g005600 31.707 615 357 17 152 706 106 717 1.83e-75 258
MS.gene003330.t1 MTR_5g005600 35.780 109 69 1 32 140 56 163 3.84e-15 79.7
MS.gene003330.t1 MTR_2g030690 46.953 279 137 5 440 707 1 279 2.86e-74 241
MS.gene003330.t1 MTR_7g427690 39.674 368 201 9 238 596 57 412 3.76e-73 244
MS.gene003330.t1 MTR_2g083330 30.206 437 262 14 296 705 105 525 1.20e-42 162
MS.gene003330.t1 MTR_2g083350 28.454 485 290 15 252 705 73 531 6.60e-41 158
MS.gene003330.t1 MTR_2g451350 48.485 132 67 1 251 381 2 133 1.27e-31 120
MS.gene003330.t1 MTR_7g427700 34.821 224 121 6 140 354 72 279 5.55e-28 117
MS.gene003330.t1 MTR_7g427700 41.322 121 56 2 22 140 17 124 1.13e-21 99.0
MS.gene003330.t1 MTR_2g030710 42.690 171 73 5 511 675 90 241 1.81e-26 108
MS.gene003330.t1 MTR_0653s0020 36.264 182 105 5 416 597 1 171 1.60e-24 102
MS.gene003330.t1 MTR_7g027605 53.333 90 39 2 326 413 3 91 1.94e-23 95.5
MS.gene003330.t1 MTR_2g030700 40.476 126 66 3 14 139 11 127 6.32e-19 84.7
MS.gene003330.t1 MTR_2g030680 39.370 127 68 3 14 140 11 128 2.61e-18 83.2
MS.gene003330.t1 MTR_5g046040 36.154 130 83 0 17 146 30 159 1.03e-17 85.9
MS.gene003330.t1 MTR_2g451350 42.222 90 52 0 292 381 5 94 3.56e-17 77.8
MS.gene003330.t1 MTR_2g030720 41.270 126 62 4 14 139 11 124 1.99e-16 77.4
MS.gene003330.t1 MTR_7g027265 35.772 123 75 2 23 143 19 139 4.43e-16 75.9
MS.gene003330.t1 MTR_6g027290 33.548 155 97 4 7 158 10 161 1.86e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003330.t1 AT1G73360 34.318 711 411 14 22 705 32 713 3.28e-125 389
MS.gene003330.t1 AT1G17920 34.290 697 399 17 27 705 26 681 1.09e-120 376
MS.gene003330.t1 AT1G17920 34.290 697 399 17 27 705 26 681 1.09e-120 376
MS.gene003330.t1 AT3G03260 32.153 734 429 20 1 705 1 694 3.40e-113 357
MS.gene003330.t1 AT3G61150 33.148 718 406 20 22 701 110 791 6.39e-107 344
MS.gene003330.t1 AT1G05230 32.109 735 376 19 7 701 51 702 1.65e-105 338
MS.gene003330.t1 AT1G05230 31.929 736 378 19 7 701 51 704 2.80e-104 334
MS.gene003330.t1 AT1G05230 31.929 736 378 19 7 701 51 704 2.80e-104 334
MS.gene003330.t1 AT1G05230 31.929 736 378 19 7 701 51 704 2.80e-104 334
MS.gene003330.t1 AT1G05230 31.929 736 378 19 7 701 51 704 2.80e-104 334
MS.gene003330.t1 AT1G05230 31.929 736 378 19 7 701 51 704 2.80e-104 334
MS.gene003330.t1 AT1G05230 31.929 736 378 19 7 701 51 704 2.80e-104 334
MS.gene003330.t1 AT1G05230 31.929 736 378 19 7 701 51 704 2.80e-104 334
MS.gene003330.t1 AT1G05230 31.929 736 378 19 7 701 51 704 2.80e-104 334
MS.gene003330.t1 AT1G05230 31.929 736 378 19 7 701 51 704 2.80e-104 334
MS.gene003330.t1 AT1G05230 31.929 736 378 19 7 701 51 704 2.80e-104 334
MS.gene003330.t1 AT1G34650 33.527 689 413 20 13 681 12 675 3.92e-103 331
MS.gene003330.t1 AT4G04890 32.018 684 401 16 22 680 62 706 4.42e-100 324
MS.gene003330.t1 AT4G04890 32.018 684 401 16 22 680 62 706 4.42e-100 324
MS.gene003330.t1 AT4G21750 29.634 766 387 18 22 705 62 757 6.51e-95 311
MS.gene003330.t1 AT4G21750 29.634 766 387 18 22 705 62 757 6.51e-95 311
MS.gene003330.t1 AT4G21750 29.634 766 387 18 22 705 62 757 6.51e-95 311
MS.gene003330.t1 AT4G21750 29.634 766 387 18 22 705 62 757 6.51e-95 311
MS.gene003330.t1 AT4G00730 30.585 752 396 19 7 705 120 798 5.55e-94 309
MS.gene003330.t1 AT3G03260 33.625 571 330 15 1 561 1 532 3.06e-92 297
MS.gene003330.t1 AT5G17320 31.908 655 358 20 129 705 71 715 3.82e-91 300
MS.gene003330.t1 AT1G05230 32.273 629 310 16 7 597 51 601 3.58e-90 294
MS.gene003330.t1 AT5G46880 31.025 722 438 22 22 707 111 808 2.94e-83 281
MS.gene003330.t1 AT5G46880 31.025 722 438 22 22 707 111 808 2.94e-83 281
MS.gene003330.t1 AT5G46880 31.025 722 438 22 22 707 111 808 2.94e-83 281
MS.gene003330.t1 AT1G79840 29.363 722 406 21 15 705 36 684 2.13e-80 270
MS.gene003330.t1 AT1G79840 29.363 722 406 21 15 705 36 684 2.13e-80 270
MS.gene003330.t1 AT4G17710 30.056 712 378 22 22 707 88 705 4.00e-80 270
MS.gene003330.t1 AT1G79840 29.501 722 405 21 15 705 94 742 5.30e-80 270
MS.gene003330.t1 AT1G79840 29.363 722 406 21 15 705 123 771 1.03e-79 270
MS.gene003330.t1 AT2G32370 29.093 739 408 22 9 703 52 718 1.55e-79 269
MS.gene003330.t1 AT5G52170 28.435 735 386 23 10 705 45 678 2.45e-74 254
MS.gene003330.t1 AT5G52170 28.435 735 386 23 10 705 45 678 2.45e-74 254
MS.gene003330.t1 AT5G52170 28.223 737 390 22 10 705 45 683 2.87e-74 253
MS.gene003330.t1 AT1G79840 30.369 596 331 16 15 595 94 620 1.07e-72 248
MS.gene003330.t1 AT4G00730 30.279 502 248 11 7 475 120 552 3.55e-61 215
MS.gene003330.t1 AT4G25530 25.770 714 426 16 23 705 42 682 1.07e-57 208
MS.gene003330.t1 AT1G79840 30.369 461 246 12 15 467 94 487 1.04e-54 196
MS.gene003330.t1 AT5G07260 25.136 553 341 20 174 705 37 537 3.24e-23 104
MS.gene003330.t1 AT5G07260 25.046 547 344 19 174 705 37 532 1.02e-22 103

Find 117 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATGAAGGTTTACCATTAA+TGG 0.136704 2.4:+59103782 None:intergenic
TCAGTGGTTACTTTACTTAA+AGG 0.217161 2.4:-59105381 MS.gene003330:intron
AACCAAAACTTCACTTGATT+TGG 0.218865 2.4:+59110682 None:intergenic
CAATTATATTTCAATTATTC+AGG 0.226703 2.4:-59104542 MS.gene003330:intron
TTAAAATCCGGTATATTTAA+AGG 0.243162 2.4:+59103810 None:intergenic
TCCACTTGGATGTTTCCTTC+TGG 0.250199 2.4:-59106696 MS.gene003330:CDS
CCTGATGTTGTTGATGGTTT+TGG 0.260108 2.4:+59103602 None:intergenic
TCTTCATGATTCTTACAATA+TGG 0.264773 2.4:+59109434 None:intergenic
TAAGAACCAATGATCCCTTA+TGG 0.268122 2.4:-59107950 MS.gene003330:CDS
TGGAGCAGAAAGATTGCTTT+TGG 0.273244 2.4:-59106041 MS.gene003330:CDS
ACATCCAAATTCACTCCTTC+TGG 0.276992 2.4:+59103645 None:intergenic
AATTTCTAATGAATATTCTA+AGG 0.277550 2.4:-59106658 MS.gene003330:intron
AATATTCATTAGAAATTTGA+TGG 0.280982 2.4:+59106664 None:intergenic
ATCCAAATCAAGTGAAGTTT+TGG 0.286140 2.4:-59110684 MS.gene003330:CDS
TGTTTCGGATGAAAATATTT+TGG 0.290522 2.4:-59108060 MS.gene003330:CDS
TCTTCAATTCCTCTTTCATT+TGG 0.310977 2.4:+59109477 None:intergenic
TCTTCAATTCCTCTTTCATT+TGG 0.310977 2.4:+59110417 None:intergenic
AGAAGATTCAACTCTTGTTT+TGG 0.315969 2.4:+59107842 None:intergenic
TAGTCCAGAAGGAGTGAATT+TGG 0.335626 2.4:-59103649 MS.gene003330:CDS
GTCGATCACACAATTGCATT+TGG 0.340096 2.4:-59106061 MS.gene003330:CDS
TCACATCTTTGCTTGTCGTT+TGG 0.348151 2.4:+59110730 None:intergenic
GGTTCTTTAGAAAATCAAAA+TGG 0.351712 2.4:-59106978 MS.gene003330:CDS
CTCTATACAGACAGTGTGTT+TGG 0.351748 2.4:+59106089 None:intergenic
TACCTATCAAACAAGTAAAC+TGG 0.352064 2.4:-59112010 MS.gene003330:CDS
TGAATTATCACCACACCGTT+TGG 0.357501 2.4:+59103876 None:intergenic
GAATTATCACCACACCGTTT+GGG 0.358303 2.4:+59103877 None:intergenic
GGAGAAAATTCCTGTTGTTT+CGG 0.362562 2.4:-59108075 MS.gene003330:CDS
AAGTATAATCTTGCTATCTA+AGG 0.371432 2.4:+59105269 None:intergenic
AAAATTTATTGCTACACATA+TGG 0.374508 2.4:-59108096 MS.gene003330:CDS
CCGTTGAAATGATCAATAAT+AGG 0.379183 2.4:+59107867 None:intergenic
AAGAACCAATGATCCCTTAT+GGG 0.382977 2.4:-59107949 MS.gene003330:CDS
CTTAACCCATAAGGGATCAT+TGG 0.393215 2.4:+59107944 None:intergenic
AGAATCCCTGATGTTGTTGA+TGG 0.401806 2.4:+59103596 None:intergenic
TTCCAGTTTACTTGTTTGAT+AGG 0.405010 2.4:+59112008 None:intergenic
AGAATGCTTCATAGATCCTC+TGG 0.408780 2.4:-59103853 MS.gene003330:CDS
GTGATATAGCCACGGAGCTT+GGG 0.423366 2.4:-59110711 MS.gene003330:CDS
AACATGCAGAAGAACAGAAA+TGG 0.430765 2.4:-59108030 MS.gene003330:CDS
TAGATTTAAAGCAAGCCATT+TGG 0.434363 2.4:-59107802 MS.gene003330:CDS
ACAATGTCACTTCTTTCCTC+TGG 0.439586 2.4:-59103759 MS.gene003330:CDS
ATAAAAGTGTCATTGTTGTT+TGG 0.440180 2.4:+59105216 None:intergenic
TCTCTCTCATCGAATGGTTA+AGG 0.440789 2.4:-59105340 MS.gene003330:CDS
CCAAAACCATCAACAACATC+AGG 0.441289 2.4:-59103602 MS.gene003330:CDS
AGAAGTGACATTGTTGATGA+AGG 0.443329 2.4:+59103768 None:intergenic
CTTGTTCACAATAGCGTAGA+AGG 0.453227 2.4:+59106787 None:intergenic
GAGATTGCACACATTTCAAC+TGG 0.456031 2.4:-59104577 MS.gene003330:CDS
ATTTCTGTTCTTCTGCATGT+TGG 0.465349 2.4:+59108032 None:intergenic
AACAAGTTGAAGCTGGTACT+TGG 0.466646 2.4:-59106770 MS.gene003330:CDS
GAAACATCCAAGTGGAAGAA+TGG 0.468632 2.4:+59106703 None:intergenic
TCTTCATCAGAAAATTTATG+AGG 0.468658 2.4:-59107898 MS.gene003330:CDS
TCTTGCTATCTAAGGATTGT+GGG 0.474566 2.4:+59105277 None:intergenic
TGTGATATAGCCACGGAGCT+TGG 0.475429 2.4:-59110712 MS.gene003330:CDS
AGTTGCAATTTCTGCTAAAG+AGG 0.476885 2.4:-59107988 MS.gene003330:CDS
ACAATTGAAGTGCTTGAAGA+AGG 0.478953 2.4:-59106999 MS.gene003330:CDS
CACTTCGCGCGGAGAATGAA+AGG 0.480846 2.4:-59109517 MS.gene003330:CDS
AATTCTCGAGATGGTACAAA+AGG 0.482781 2.4:+59106813 None:intergenic
AATGTGAGACTTAACCCATA+AGG 0.489274 2.4:+59107935 None:intergenic
ATGTGAGACTTAACCCATAA+GGG 0.491613 2.4:+59107936 None:intergenic
AAACAAAAGGAGTCAACAAA+AGG 0.492314 2.4:-59110656 MS.gene003330:intron
CTAAAAGCAACTTAACCAAA+TGG 0.494670 2.4:+59107787 None:intergenic
CATTGTTGTTTGGTTGAAAG+AGG 0.495907 2.4:+59105226 None:intergenic
ATCTTGCTATCTAAGGATTG+TGG 0.501981 2.4:+59105276 None:intergenic
CCCAACTATTGTTACAAAAG+CGG 0.502689 2.4:-59107024 MS.gene003330:CDS
AAGTCAAACAACATCTGAGA+TGG 0.504447 2.4:+59105165 None:intergenic
CACTTCGAGCGGAGAATGAA+AGG 0.507621 2.4:-59110457 MS.gene003330:CDS
CAAGAACAACCAAATGAAAG+AGG 0.509196 2.4:-59109486 MS.gene003330:CDS
TCTTTATTGTATTTGAGATG+AGG 0.509325 2.4:+59112052 None:intergenic
ACGATAGTCAATCTCATTCG+AGG 0.514712 2.4:-59103722 MS.gene003330:CDS
CGAGAACAACCAAATGAAAG+AGG 0.517989 2.4:-59110426 MS.gene003330:CDS
ATCATATGATTACGCAAAAG+AGG 0.522040 2.4:-59106733 MS.gene003330:CDS
CCTATTATTGATCATTTCAA+CGG 0.522352 2.4:-59107867 MS.gene003330:CDS
TTAATGGAATCCTTAAAATC+CGG 0.522496 2.4:+59103798 None:intergenic
GGAACCTGAAAACGTCCTAC+AGG 0.527300 2.4:+59105132 None:intergenic
TTCATTCTCCGCTCGAAGTG+CGG 0.534827 2.4:+59110460 None:intergenic
CGAATGAGATTGACTATCGT+TGG 0.536682 2.4:+59103725 None:intergenic
AACAAGCTCCGCACTTCGAG+CGG 0.542911 2.4:-59110468 MS.gene003330:CDS
TAGTGGGATGATAATTATCA+AGG 0.543064 2.4:-59104613 MS.gene003330:CDS
ATGGACTCCATTCTTCCACT+TGG 0.544255 2.4:-59106710 MS.gene003330:CDS
TTCAAGTTGAAGTTGTTGCA+TGG 0.545091 2.4:+59109400 None:intergenic
TTCAAGTTGAAGTTGTTGCA+TGG 0.545091 2.4:+59110340 None:intergenic
CTATCGATGTCTAGTCCAGA+AGG 0.560750 2.4:-59103660 MS.gene003330:CDS
AACTAGCTCTGCACTTCGCG+CGG 0.567018 2.4:-59109528 MS.gene003330:CDS
AACATATCTATTTATGATAG+CGG 0.567961 2.4:-59105980 MS.gene003330:CDS
TAAAGGAGAAAACACAACAT+AGG 0.568052 2.4:+59103827 None:intergenic
AGTCAAACAACATCTGAGAT+GGG 0.573568 2.4:+59105166 None:intergenic
AATTATCACCACACCGTTTG+GGG 0.574452 2.4:+59103878 None:intergenic
TATGATTACGCAAAAGAGGA+TGG 0.580737 2.4:-59106729 MS.gene003330:CDS
GGTTTCATGGGTTGAACATG+TGG 0.586718 2.4:-59106128 MS.gene003330:CDS
ACAAGTTGAAGCTGGTACTT+GGG 0.588116 2.4:-59106769 MS.gene003330:CDS
AGAAGGTAAAATTCTCGAGA+TGG 0.590134 2.4:+59106804 None:intergenic
ATGTGTGCAATCTCATGCAT+TGG 0.597886 2.4:+59104586 None:intergenic
TGAAAATGCTTGTCTCAAAG+AGG 0.600390 2.4:-59110321 MS.gene003330:CDS
TATAGCCACGGAGCTTGGGA+TGG 0.601253 2.4:-59110707 MS.gene003330:CDS
AAATGCTCGTCTCAAAGAAG+AGG 0.602513 2.4:-59109378 MS.gene003330:intron
GAATGCTTCATAGATCCTCT+GGG 0.604427 2.4:-59103852 MS.gene003330:CDS
TGATGGATCAAGCATCCAGA+AGG 0.609676 2.4:+59106681 None:intergenic
TATTGTGAACAAGTTGAAGC+TGG 0.610611 2.4:-59106777 MS.gene003330:CDS
AACAACATCTGAGATGGGAA+AGG 0.613811 2.4:+59105171 None:intergenic
AAGAAGTTCTTTGTTGACCG+TGG 0.617944 2.4:-59103691 MS.gene003330:CDS
GGTGCATCTCTCTCATCGAA+TGG 0.618887 2.4:-59105346 MS.gene003330:CDS
AAGAATAAGATATCATGTAG+TGG 0.624551 2.4:-59109458 MS.gene003330:CDS
CATCGATAGTTGAAAAGCCA+CGG 0.634954 2.4:+59103674 None:intergenic
GATGTTTGACTTGCTTAACA+AGG 0.643929 2.4:+59105299 None:intergenic
AAGAATAAGATATCATGCAG+TGG 0.648893 2.4:-59110398 MS.gene003330:CDS
ACTTAAAGGAAAGAAGAGTG+TGG 0.653545 2.4:-59105367 MS.gene003330:CDS
ATTATCACCACACCGTTTGG+GGG 0.657117 2.4:+59103879 None:intergenic
GCAAAGATGTGATATAGCCA+CGG 0.659016 2.4:-59110719 MS.gene003330:CDS
CAAAACCATCAACAACATCA+GGG 0.661282 2.4:-59103601 MS.gene003330:CDS
AAAATGGACTCATCTTCAAG+AGG 0.661814 2.4:-59112099 MS.gene003330:CDS
AAATGCTTGTCTCAAAGAGG+AGG 0.663354 2.4:-59110318 MS.gene003330:intron
GACTTCTTAAGAGATCCTGT+AGG 0.666406 2.4:-59105147 MS.gene003330:CDS
ATATCTATTTATGATAGCGG+AGG 0.672126 2.4:-59105977 MS.gene003330:intron
ATTGCACACATTTCAACTGG+TGG 0.679678 2.4:-59104574 MS.gene003330:CDS
TCCAGAAGGAAACATCCAAG+TGG 0.683818 2.4:+59106695 None:intergenic
TGGATCCATCCCAAGCTCCG+TGG 0.704130 2.4:+59110702 None:intergenic
GTTGGAGATGACAAAGCCAG+AGG 0.710138 2.4:+59103743 None:intergenic
AACACAACATAGGATCCCAG+AGG 0.760672 2.4:+59103837 None:intergenic
TGGGAAAGGAAGCAACACTG+AGG 0.770808 2.4:+59105185 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr2.4 gene 59103581 59112118 59103581 ID=MS.gene003330
chr2.4 mRNA 59103581 59112118 59103581 ID=MS.gene003330.t1;Parent=MS.gene003330
chr2.4 exon 59112006 59112118 59112006 ID=MS.gene003330.t1.exon1;Parent=MS.gene003330.t1
chr2.4 CDS 59112006 59112118 59112006 ID=cds.MS.gene003330.t1;Parent=MS.gene003330.t1
chr2.4 exon 59110657 59110774 59110657 ID=MS.gene003330.t1.exon2;Parent=MS.gene003330.t1
chr2.4 CDS 59110657 59110774 59110657 ID=cds.MS.gene003330.t1;Parent=MS.gene003330.t1
chr2.4 exon 59110319 59110507 59110319 ID=MS.gene003330.t1.exon3;Parent=MS.gene003330.t1
chr2.4 CDS 59110319 59110507 59110319 ID=cds.MS.gene003330.t1;Parent=MS.gene003330.t1
chr2.4 exon 59109379 59109567 59109379 ID=MS.gene003330.t1.exon4;Parent=MS.gene003330.t1
chr2.4 CDS 59109379 59109567 59109379 ID=cds.MS.gene003330.t1;Parent=MS.gene003330.t1
chr2.4 exon 59107782 59108132 59107782 ID=MS.gene003330.t1.exon5;Parent=MS.gene003330.t1
chr2.4 CDS 59107782 59108132 59107782 ID=cds.MS.gene003330.t1;Parent=MS.gene003330.t1
chr2.4 exon 59106965 59107066 59106965 ID=MS.gene003330.t1.exon6;Parent=MS.gene003330.t1
chr2.4 CDS 59106965 59107066 59106965 ID=cds.MS.gene003330.t1;Parent=MS.gene003330.t1
chr2.4 exon 59106659 59106862 59106659 ID=MS.gene003330.t1.exon7;Parent=MS.gene003330.t1
chr2.4 CDS 59106659 59106862 59106659 ID=cds.MS.gene003330.t1;Parent=MS.gene003330.t1
chr2.4 exon 59105978 59106149 59105978 ID=MS.gene003330.t1.exon8;Parent=MS.gene003330.t1
chr2.4 CDS 59105978 59106149 59105978 ID=cds.MS.gene003330.t1;Parent=MS.gene003330.t1
chr2.4 exon 59105137 59105399 59105137 ID=MS.gene003330.t1.exon9;Parent=MS.gene003330.t1
chr2.4 CDS 59105137 59105399 59105137 ID=cds.MS.gene003330.t1;Parent=MS.gene003330.t1
chr2.4 exon 59104543 59104632 59104543 ID=MS.gene003330.t1.exon10;Parent=MS.gene003330.t1
chr2.4 CDS 59104543 59104632 59104543 ID=cds.MS.gene003330.t1;Parent=MS.gene003330.t1
chr2.4 exon 59103581 59103916 59103581 ID=MS.gene003330.t1.exon11;Parent=MS.gene003330.t1
chr2.4 CDS 59103581 59103916 59103581 ID=cds.MS.gene003330.t1;Parent=MS.gene003330.t1
Gene Sequence

>MS.gene003330

ATGGACTCATCTTCAAGAGGTGTATCTGATGATCATCAAGAGAACCTCATCTCAAATACAATAAAGAAAGCTAGCAATCATCGCTCTACCTATCAAACAAGTAAACTGGAAGAGTAAGAAGACTAATCCTTGTTTGTGAAAATTTTCTTTTCTTCTTCTTGATTTTACTTTATTTGTTGTGTGAAAAAGCATTGATCTTGGAGTATTGTGTTGAGGAATGTGTGTGTATATATGTGTGTGTCATTTTACTCGATACATATTTTACAAATTTGTCCATTGAATTTTAAGCTTATATCATATAGATCATCCATGTAAAGTTTTACACAAATTTAAAATCATTTGATATGTTATTGATACTCATTAAGATTAACTGTTTATGCAATTTTATTGAACATCATTCATCTTGGTGAGTATCAATAAGATATCAAATGATTTTAAATTTGTGTAAAATTTGACATGAATGATATATATGATGTAAATTTATAATTTTATGGTCAAATTTAAAAATTATATATGGTGTAAAAGGATATTGAGCGGTGTAACATTGATATAACATAGGCGAAATTTGATCCATCCCCGTTATGATTTTTTTTTTGAAGGGATCCATCCCCGTTATGATATAATTTTATTCATGTAGTCAGTCACATTCAATATATATCCAACTTTTTTTAATCGCAGATATGTGTGAGTGTCAGTGTGGAAAATGGTTATATTTACGAAAATTGGTTGCAAGAAAGGCACGAATAAATCTTATCGGTTGATCTTAGTTTTTCAACCACACATGACCGTGTATTTAGTCAAATATTTAATTAATGTGTCTCTTTTTTAAAAAAAAAAAAAATTAAATGCTTCATAACATGTATGTGTCAATTCTTGTAAAAAAAAAAAAGGCTTAATTGCACTTTTCCCCTATCTTTTGTTAATTGTGCGATTTTGCACCCCCTCTTTTTTTTTTGAGCGATTTTGCACCCCATCTTTTTGCCCAATTTCTGGTTAGATGAAACTTCTTGTGTTTAATTGCACTTTTGCCCCCTATCTTTTTGCCAATTGTGCGATTTTGCACCCCCTCTTATATTTTTTGAGCGATTTTGCACCCCATCTTTTTGCCCCCTTTCCCCTTTTTTAATGATGATTTTGAACAAAACACAATTGGCAAAAGATGGGGTTCAAAATCGCTCAAAAAAAAGAGGGGGTGTAAAATCGCACATTTGGCAAAAGATAGGGGGAAAGGTGCAATTAAGAAAAAAAAAATTGGAAGTGTCAAATGTTTTTTTGCATATGTCATTTATGTTTTTATATACTTTCTCACCTGATTGGATCTTTTTTTCCCCTTCTGAAATAAAGAATATTCACGACAGTCACACATCCAAACGACAAGCAAAGATGTGATATAGCCACGGAGCTTGGGATGGATCCAAATCAAGTGAAGTTTTGGTTTCAAAACAAAAGGAGTCAACAAAAGGTCACATTTTTTTTTCTTTTATTTAATTTGATACTTCATTTTAAAGACAAAAGTCTTTTACATGACTGACCAAGTAATATAAATTAATGTTTCAAAAAAAAAAGTAATATAAATTAATAATAAGTTTAGTTGTATATTATGATTTCTAGACTCAAAATGAGAAAGCAACAAGCTCCGCACTTCGAGCGGAGAATGAAAGGCTTCTTAACGAGAACAACCAAATGAAAGAGGAATTGAAGAATAAGATATCATGCAGTGGTTCATACTGTAAGAATCATGAAGATTATGAAAACTCCATGCAACAACTTCAACTTGAAAATGCTTGTCTCAAAGAGGAGGTGAGTCAATATGACTAATAATATGTGTAATTTGTTAGGTTAAGCGTGAGCGATTAGTCTCACTCTAAATCTATTTCGACCCTACAAAATCAACTTTTAATGTAAAAATTATTCTCATAGACACATGCTCATGTCATATCTAATCTAGTATGAGACTTTTAATATCGACTATTGATCTTGTCGCACCTGAGATCTTTGAGTGACGATGTTGAATGGCATTTGAGTTACGTACTTCTGTGAGCAGTAACTTTTTTCTATGGAACAATGAGGGTGGTGTATCTGCATACATTCTGACGATCAAGCAAGTAAGTGATGTGGAATGATAGGTATTTTATGGTAAATGTGAGTGTACCTGACCCAATGTCCATGAGTTAGTATTTATAAAATAGGTTTAGGGTTGTGTTTTTTTGACCTTCACCTAGACAATTGTCCTTAAGGGACAATAGTAGTCCTCAAGTGATAACAATGAGTAGATAATGAGATGATGACCTTGGGTCCGAGCTAAAGGATCCAGATTGCTTCCAAGGGTCATTATTCTCATGTTGTCTATACCATGGTAGTTGCGGACCTTGTACAAAGAGCCACTTAGAGCACATGTTGGATTGGACCTCACCCAGACCGTAGCAACTATGAATGTCACATTTTTTCTTTTATTTAATTTGATACTTCATTTTAAAGACAAAATTCTTTTACGTGACTTACCAAGTAATATAATTTAATAATAATTTTACATGTATATTATGAATTCTAGACTCAAAATGAGAAAGCAACTAGCTCTGCACTTCGCGCGGAGAATGAAAGGCTTCTCGACAAGAACAACCAAATGAAAGAGGAATTGAAGAATAAGATATCATGTAGTGGTCCATATTGTAAGAATCATGAAGATTATGAAAACTCCATGCAACAACTTCAACTTGAAAATGCTCGTCTCAAAGAAGAGGTGAGTCAACATGACTAATAAGATGTGTAATTTGTTACATTAAGAATGAGTGATTAGTCTCGCATTGAATCTATTTTGATCCTACAAAACCAATTTTTAATGTAAAAATTATTCTCATAGACACATGTTAATGTCATATCTAATCTAGTATGAGACTTTTAATATCGACTGTTGATCTTGTCAAGCCTATGATCTTTGAGTGACGATGTTGAATGGAATTCCAGTTACCTATTTATGTGAGCAACAACTTTTTTTCTTTGGAACAATGAGGGTGGTGTACCTGCATACATTATGATAATCAAGTAAGTAAGTAAGTGATGTTGAATGATAAGTATTTTAGGGTAAATGTGAGCGTACCTGACCCAATGTTCATGAGTTAGTATTTATAGAGTATGTTTAGGGTTTTGGTCCTTGGACCTTTACCTATACATATGTCCTTAAGGGACGATTGTAGTCTTCAAGGGATATCTGTGAGTAGATCATGAGACGATGGCCTTGGATCCAGGCAGAAGGGTCCAGATTGCTTCCAGGGGTCATTATTTCCATGAGGTCTATACCATGGTCCTTACGAGCCTTGTACAAAGAGCCTCTTAGAACTTATGTTAAGTTGGACCTCGCCCATACTGGAACAACTATGAATGAATATATCTAATGTCTCCAGATTTTAAGAGGAGATATGATGGTATGATCTCTTAGTGGTTTTAGAGCCTTAGTTCAGCTTGGTGGGTGAGTGAAAGTGAGTCGTGATGTATTAGATCCTTGTATAAATGTCATTCTGACATTACTCAGGAGTTGGTGTTTCGTTGGTTCTAAATATTGGATAGAAATTGTGGTGTTCAAGTGTGACCACATCAACCATCAATATATAAATATTGGATATATAATAAATGTGATCCACATAATGTTTTAAGATTTTGTATGAAGATGTGTTGTCCTGATCTTTTGATGGTCCAAGAAATACTATGCAAATATAGGAAATTGGACACTCACACTTGAGGAAGAAATTGTTGGTCGGATTAAAACGTTAGTTAGTCCACATGGACTATGAATTGTGGATATATAAGAGAGGTGAACATATATCCAATAACCTAAGATTTTGATTGGAGATGTGATGTATTAATCTCTTAATGGTCCTTGATTATTAATTGGAGTATCTTTTATACTCTCCTAATTGAAATAATATTTATATGTTATTAGATTATATACAAAATAACTGATTTGTGTTTATTTATGAACTTGTTTTCAGTATGAGAGGATGTCAAAATTTATTGCTACACATATGGAGAAAATTCCTGTTGTTTCGGATGAAAATATTTTGGTCAAACCAACATGCAGAAGAACAGAAATGGAAAAAACAATGATGTTGGAAGTTGCAATTTCTGCTAAAGAGGAGTTACTTAAGCTCTTAAGAACCAATGATCCCTTATGGGTTAAGTCTCACATTGATCAAAGACTTGTTCTTCATCAGAAAATTTATGAGGATGTATTTCCTATTATTGATCATTTCAACGGCGCCAAAACAAGAGTTGAATCTTCTAATGATTCAAAAACAGTTAGATTTAAAGCAAGCCATTTGGTTAAGTTGCTTTTAGATTCGGTAAGAATTTATAACTTAAGTATCCCCACAATGATTTTTATGTTGAGGATTTCCTACATATAACATTTTCTTTACCTAATTACTGTTTACCCTTTGTATGGTCAATAATTTAAGGGTCATGCTAACCAGTGTCCCCGGTGCACCGTACCGTACTGATTAAGGAAGCCAAAAAAGAAAATTTTGAGTCAAAATATCATTTTTTAAGCTTTTAATGTATTAAATACACAACTTTTAATGCAAAAAACTACTATATTTGATTCCTTAACCAGTGCCCGGAGGCACTGATTAACATTTCCCATAATTTAAATAGCCATTGTGGTCAAACGACCTAAGCTATTGGATTGAGATGATTCACACTGGGATTTCAAAAGTCTAGACTTAGGAATCTCTAACCTCCAATATTTCTCGATGGTTAAGATCATAACTGCAATAATTGTTGAGCACATAATTTTTTTTAATTAATTCAGTTTTTATCTAAAAACCGACTAATTTAGGAATACTAAGGGACAAATTTACTAATTATTATCATATATTTTTGGAGATTAAGTAGTATAAAAAAAGTGACACTTGAGTAACTAATAGGGTTTTACACGTTAAATATGTATACTAATGATTTTAAAAACATTAATTTTAACATTATCTTACAATTTTAATATGTCTCATAAGAAGTATTCATTGTCTATGGAAATGTTGTAATTTTCATCTATCAATATAGGAAAAATGGAAAACTCTTTTCCCAACTATTGTTACAAAAGCGGAAACAATTGAAGTGCTTGAAGAAGGTTCTTTAGAAAATCAAAATGGAGTTTTGCAATTGGTATGTGTTCCTAATTAAAACCCTAGTTCTTTTTATAATAACTTTATTTGTTTATAATATTTTGATTTTGATTTTTGCTAAATGGTACGACTTATGTTGCAGATGTATGAAGAGATGCATGTTCTTTCACCTTTTGTACCATCTCGAGAATTTTACCTTCTACGCTATTGTGAACAAGTTGAAGCTGGTACTTGGGTGATAGCTAATGTATCATATGATTACGCAAAAGAGGATGGACTCCATTCTTCCACTTGGATGTTTCCTTCTGGATGCTTGATCCATCAAATTTCTAATGAATATTCTAAGGTTGGTACAAGTATATTTTTGTTTTTGTGAAATACAGTTATACATAAATTGTATGATACTGCTACAATTTATGAGTAGAGTCAATATGGTCCAAAAATAAGTTAATAAAAAAATTAGTTATCAAAATTAAAGGAAAAAAAATGATTTTTTTTCATTTGTTTAGTAGTGAATATATAAGTAATTTTTGTATACAGTTGTTTTCCAATCTCTACATTGATGCATGCAGCATGCATGCTTTGCTAAAATTTGATAATAGTATAAATGAAATGCTAACAAGTGCCTTTAGGGCATTGTTTAAGCATTCAAAAGTGGTAATTTTTTACATTAAAATCGTGTAGTTGTGACTTTTACAAGTGTTTAACTTATATTTTTAAGTCAATATTTTTTTTGTTGATGTGGGCTTCTTAAAGAATATCTTTAGGGCACTTGATAGCAAGACTCATAGTATAATATGCTAGCTAAATGTGTTATTTGAATGTCATTAATTAATATAAATATTTTTCTTGTAGGTTTCATGGGTTGAACATGTGGAAGTCATTGACAAGATCCAAACACACTGTCTGTATAGAGATGTTGTCGATCACACAATTGCATTTGGAGCAGAAAGATTGCTTTTGGATCTTCAAAGAGCGTGTGAAAAGATTTCCAGACTAAAAAACATATCTATTTATGATAGCGGAGGTAACTCACTAGTTACTATCTATCAACATTACACTAAATTAACATATTTTTTGGACAAAATCAAATTAACATTTTACATCTCGTTCCATCTCATGTTACATGTATTTTTAAGATAATGCACAATTTTTAAGAAAATGACTTGCTTGTTAAATTCAATAGTAAAATAGTGCATTCAGTGTAGAGTATTGAACAAAGACATTTATAATGCCAAATCAATTTCAATATATGTTGGTAACTACTTCTTTCGATCCTATTTATAAGAGACATTTAAGTCAACGTAAAATGATGTATCTAATTCAAATTTTGAACCAGATATCTCAATTTTTTGTTGACCTAAAAGTCACTTATAAACAAAACCAGAAATAGTTTATTCTCTTTCGATCCTATTTATAGGGGTCATATTATTTCGAAAATGAGTCCCACCACATAGAAAATTGACCCAAATAGATCAGTGTGGTCCACATAAATTTTGATCAATAATAGAAAAAGTATAAAAAAAAGGTGTTAGAAAGTTTGTTGTTAACAAGTATCTTACCTTATTAATTGTGAGTTAATTTGTTATTCTATTCATTTTTCAGTGGTTACTTTACTTAAAGGAAAGAAGAGTGTGGTGCATCTCTCTCATCGAATGGTTAAGGACTTCTGTAAAATTTTGTCCTTGTTAAGCAAGTCAAACATCCCACAATCCTTAGATAGCAAGATTATACTTGCTATTAGAAAAAGTGGGGTCCTCTTTCAACCAAACAACAATGACACTTTTATTGTTGCTACCTCAGTGTTGCTTCCTTTCCCATCTCAGATGTTGTTTGACTTCTTAAGAGATCCTGTAGGACGTTTTCAGGTTCCTAAAGCTAAATAGTTTTTTAGTTTATTTAAAATTTAGAGGTCGTTTGTTATTATAAAAATAGCGATTTTGGTATTTAATAATTAATAGATTAATTTGTAAAGTATTTTAAATAAATAAATAAAGTTTTTTTTGTCTTTTTATTAGAATGTAAATCATTTTCCTTTTCTTTTTTTTGAATATGTATTAAAATGAATTTTTAGCGAAGCTACTAAAAACAATTTATGATTTGATTTAGTTTTAGATTAGGTTTTTTTTTATTTTTAAAAAGCTACTAAAAACAATTTATTTCAACGCTTTTCTTTTTTAAATCACATTTTTTTTTATGAAAACCCGTAACCAACCGATAAAAGTTTTAAAAGTGATTATTTTATTTAAAGAAAAAGTTTTTCTCACGAAAAAAAGTTGTAAGAAACAAGCTTGTATTTTGCTTGTTCTTAAATATATTTTTTTTTTATTGTAGACTATCATTAATCAATTTACTCATTATTTTTCTTGTAGTGGGATGATAATTATCAAGGAAATCCAATGCATGAGATTGCACACATTTCAACTGGTGGTGACTCAAACAATTATATTTCAATTATTCAGGTACTCACCATTTTTCTTCCTTAAAAATATTTTAGCAATTATTATGTATTTATAAAGATGATTGACATCCAAATGTTAAAACTTAAAAGTCATTTATGAAAATAAAAACATCAAGGATTTTATGATCATATACAGTGTTGCGTATCCATACAAGAGATCTATGTGAGAGGAGAAATCATTACTCTAGTTGACTAGTCATATATATCATCGTTTTTTTAGTATGCAAATAAAATAACAAACACTTTTGAACTCGGCGAAGATAACAAACACTTGAGAGGTTACATTATACCTCTAAAGAGTAAGCAGTAATGTACTTTTCAACCTAATGTTGGATGCCATTAACATCTACAACCCATGCATTTCCAACTTGCAAATATATTGTATGAATCCTCTCCCTATATTCAACATATGCCTGAAAATAACCAGCATTGGCATCATTTACTTAAAAAATTATCTTGCTTTCATAAATTTGTCATCAAAGATTATGTTGATCCCAATCTTGACAATCATAATATGTTCAAAATATGAATCAACTTGATTCTTTTTTAGAATAAAAATCAAGTTGTCCCTTTATTGTAAATGCTTTCCCTATTATTAACTTGATTGCTAATAATTCATGTGAGCAGCCTATGGAACCTCCTCCCCCAAACGGTGTGGTGATAATTCAAGAATGCTTCATAGATCCTCTGGGATCCTATGTTGTGTTTTCTCCTTTAAATATACCGGATTTTAAGGATTCCATTAATGGTAAACCTTCATCAACAATGTCACTTCTTTCCTCTGGCTTTGTCATCTCCAACGATAGTCAATCTCATTCGAGGAAAAATGCAAGAAGTTCTTTGTTGACCGTGGCTTTTCAACTATCGATGTCTAGTCCAGAAGGAGTGAATTTGGATGTTGTTGCTAAATCATTCGTGACCAAAACCATCAACAACATCAGGGATTCTTTAATCAATGTCTAA
Protein sequence

>MS.gene003330.t1

MDSSSRGVSDDHQENLISNTIKKASNHRSTYQTSKLEEIFTTVTHPNDKQRCDIATELGMDPNQVKFWFQNKRSQQKTQNEKATSSALRAENERLLNENNQMKEELKNKISCSGSYCKNHEDYENSMQQLQLENACLKEETQNEKATSSALRAENERLLDKNNQMKEELKNKISCSGPYCKNHEDYENSMQQLQLENARLKEEYERMSKFIATHMEKIPVVSDENILVKPTCRRTEMEKTMMLEVAISAKEELLKLLRTNDPLWVKSHIDQRLVLHQKIYEDVFPIIDHFNGAKTRVESSNDSKTVRFKASHLVKLLLDSEKWKTLFPTIVTKAETIEVLEEGSLENQNGVLQLMYEEMHVLSPFVPSREFYLLRYCEQVEAGTWVIANVSYDYAKEDGLHSSTWMFPSGCLIHQISNEYSKVSWVEHVEVIDKIQTHCLYRDVVDHTIAFGAERLLLDLQRACEKISRLKNISIYDSGVVTLLKGKKSVVHLSHRMVKDFCKILSLLSKSNIPQSLDSKIILAIRKSGVLFQPNNNDTFIVATSVLLPFPSQMLFDFLRDPVGRFQWDDNYQGNPMHEIAHISTGGDSNNYISIIQPMEPPPPNGVVIIQECFIDPLGSYVVFSPLNIPDFKDSINGKPSSTMSLLSSGFVISNDSQSHSRKNARSSLLTVAFQLSMSSPEGVNLDVVAKSFVTKTINNIRDSLINV