AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003828

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003828.t1 MTR_4g068740 98.610 935 13 0 1 935 188 1122 0.0 1903
MS.gene003828.t1 MTR_4g068740 98.619 869 12 0 67 935 13 881 0.0 1781
MS.gene003828.t1 MTR_8g100085 27.245 323 166 10 599 920 133 387 1.93e-23 104
MS.gene003828.t1 MTR_3g034100 27.190 331 156 12 599 920 82 336 1.30e-22 101
MS.gene003828.t1 MTR_2g013900 31.466 232 120 7 609 840 171 363 1.88e-21 99.4
MS.gene003828.t1 MTR_3g073250 29.530 298 138 11 619 916 292 517 3.04e-21 99.4
MS.gene003828.t1 MTR_4g094415 27.469 324 166 10 595 918 159 413 4.16e-21 98.6
MS.gene003828.t1 MTR_5g059880 30.855 269 114 12 650 916 241 439 3.05e-20 95.5
MS.gene003828.t1 MTR_3g101210 27.844 334 152 13 615 934 315 573 8.54e-20 95.5
MS.gene003828.t1 MTR_3g073250 33.784 222 102 9 619 840 305 481 8.74e-20 94.4
MS.gene003828.t1 MTR_3g101210 27.844 334 152 13 615 934 315 573 1.04e-19 94.7
MS.gene003828.t1 MTR_3g078000 28.990 307 149 10 625 929 81 320 1.07e-19 92.4
MS.gene003828.t1 MTR_5g059940 30.627 271 112 12 650 916 174 372 3.27e-19 91.7
MS.gene003828.t1 MTR_5g060350 30.258 271 113 12 650 916 370 568 4.38e-19 92.8
MS.gene003828.t1 MTR_4g105770 28.527 319 155 14 613 928 72 320 4.69e-19 90.5
MS.gene003828.t1 MTR_5g017890 26.650 394 192 15 563 931 317 638 4.86e-19 92.8
MS.gene003828.t1 MTR_3g096230 29.455 275 122 13 650 923 294 497 5.07e-19 92.0
MS.gene003828.t1 MTR_1g100250 28.261 276 128 14 650 922 461 669 6.26e-19 92.8
MS.gene003828.t1 MTR_3g096230 29.455 275 122 13 650 923 294 497 8.32e-19 92.0
MS.gene003828.t1 MTR_4g094415 30.769 247 129 9 595 841 159 363 2.70e-18 89.0
MS.gene003828.t1 MTR_5g059910 29.478 268 119 10 650 916 180 378 6.81e-18 87.4
MS.gene003828.t1 MTR_8g098425 31.414 191 91 7 650 840 458 608 7.06e-18 89.4
MS.gene003828.t1 MTR_4g132860 27.835 291 143 11 622 911 101 325 3.20e-17 85.1
MS.gene003828.t1 MTR_1g113960 31.727 249 123 13 613 860 315 517 4.66e-17 86.3
MS.gene003828.t1 MTR_1g113960 31.727 249 123 13 613 860 315 517 4.68e-17 86.3
MS.gene003828.t1 MTR_4g088745 30.890 191 93 7 650 840 95 246 2.05e-16 82.4
MS.gene003828.t1 MTR_6g071280 25.658 304 184 7 579 879 23 287 2.36e-16 81.6
MS.gene003828.t1 MTR_4g088755 30.890 191 93 7 650 840 90 241 2.47e-16 82.0
MS.gene003828.t1 MTR_1g099110 30.702 228 101 8 691 916 338 510 3.84e-16 83.2
MS.gene003828.t1 MTR_4g088750 34.667 150 73 5 691 840 278 402 4.63e-16 82.8
MS.gene003828.t1 MTR_0685s0020 33.871 186 67 9 743 923 113 247 4.76e-16 79.7
MS.gene003828.t1 MTR_1g099110 30.702 228 101 8 691 916 355 527 4.96e-16 83.2
MS.gene003828.t1 MTR_7g072710 27.542 236 119 8 690 920 118 306 2.42e-15 79.3
MS.gene003828.t1 MTR_7g072710 28.390 236 117 8 690 920 81 269 2.80e-15 78.6
MS.gene003828.t1 MTR_3g114900 29.123 285 131 10 650 932 315 530 2.99e-15 80.5
MS.gene003828.t1 MTR_5g066490 26.437 348 169 15 589 920 624 900 3.02e-15 80.9
MS.gene003828.t1 MTR_1g050690 29.020 255 135 12 609 860 427 638 3.06e-15 80.5
MS.gene003828.t1 MTR_1g081790 27.344 256 142 10 613 867 703 915 3.45e-15 80.9
MS.gene003828.t1 MTR_1g061190 30.035 283 141 15 603 873 559 796 3.63e-15 80.5
MS.gene003828.t1 MTR_1g081790 27.344 256 142 10 613 867 703 915 3.89e-15 80.5
MS.gene003828.t1 MTR_2g092980 29.289 239 120 11 613 848 571 763 4.00e-15 80.5
MS.gene003828.t1 MTR_2g092980 29.289 239 120 11 613 848 552 744 4.59e-15 80.1
MS.gene003828.t1 MTR_2g092980 29.289 239 120 11 613 848 516 708 5.13e-15 80.1
MS.gene003828.t1 MTR_2g092980 29.289 239 120 11 613 848 535 727 5.50e-15 80.1
MS.gene003828.t1 MTR_6g044830 24.422 303 183 12 618 920 327 583 8.10e-15 79.3
MS.gene003828.t1 MTR_4g106980 24.615 325 180 12 605 920 95 363 8.65e-15 77.8
MS.gene003828.t1 MTR_0015s0060 24.709 344 195 13 594 925 32 323 8.92e-15 77.4
MS.gene003828.t1 MTR_1g016300 27.626 257 134 10 618 865 674 887 1.10e-14 79.3
MS.gene003828.t1 MTR_1g110130 24.092 303 184 13 618 920 305 561 1.17e-14 78.6
MS.gene003828.t1 MTR_3g100090 28.226 248 129 9 618 857 664 870 3.12e-14 77.8
MS.gene003828.t1 MTR_3g078110 26.068 234 115 8 691 920 155 334 5.49e-14 75.1
MS.gene003828.t1 MTR_3g115490 27.458 295 160 17 630 920 117 361 6.76e-14 75.1
MS.gene003828.t1 MTR_4g106980 26.531 245 141 9 605 840 95 309 9.07e-14 73.9
MS.gene003828.t1 MTR_7g101800 27.815 302 154 15 650 935 136 389 2.12e-13 73.9
MS.gene003828.t1 MTR_5g006560 25.617 324 174 12 609 920 93 361 2.14e-13 73.6
MS.gene003828.t1 MTR_7g101800 28.146 302 153 15 650 935 144 397 2.33e-13 73.9
MS.gene003828.t1 MTR_7g101800 28.146 302 153 15 650 935 156 409 2.64e-13 73.6
MS.gene003828.t1 MTR_5g018570 25.994 327 185 13 598 920 329 602 3.09e-13 74.3
MS.gene003828.t1 MTR_2g040510 32.895 152 79 5 690 840 142 271 5.59e-13 72.0
MS.gene003828.t1 MTR_5g055310 24.839 310 186 12 618 926 328 591 6.88e-13 73.2
MS.gene003828.t1 MTR_4g005730 33.117 154 83 3 691 844 97 230 7.50e-13 73.2
MS.gene003828.t1 MTR_1g103850 27.817 284 145 13 605 881 30 260 8.09e-13 72.8
MS.gene003828.t1 MTR_4g005730 33.117 154 83 3 691 844 97 230 8.25e-13 72.8
MS.gene003828.t1 MTR_5g006560 25.617 324 174 12 609 920 127 395 8.27e-13 72.0
MS.gene003828.t1 MTR_4g005730 33.117 154 83 3 691 844 97 230 8.43e-13 72.8
MS.gene003828.t1 MTR_1g010250 30.126 239 123 10 691 922 367 568 9.31e-13 72.4
MS.gene003828.t1 MTR_7g113490 28.272 191 99 7 650 840 121 273 9.42e-13 72.8
MS.gene003828.t1 MTR_1g103760 26.423 246 135 9 619 856 21 228 1.17e-12 71.6
MS.gene003828.t1 MTR_5g069600 25.970 335 185 14 595 922 125 403 1.19e-12 71.6
MS.gene003828.t1 MTR_2g088020 30.594 219 99 10 650 864 49 218 1.37e-12 71.2
MS.gene003828.t1 MTR_5g045190 27.885 312 154 16 610 916 242 487 1.46e-12 72.4
MS.gene003828.t1 MTR_2g034020 29.333 225 111 9 618 840 486 664 1.59e-12 72.0
MS.gene003828.t1 MTR_5g071560 27.072 181 93 7 660 840 67 208 2.31e-12 70.5
MS.gene003828.t1 MTR_8g442400 26.860 242 145 7 599 840 1386 1595 2.32e-12 72.0
MS.gene003828.t1 MTR_1g063910 28.467 274 151 14 650 920 139 370 2.40e-12 70.5
MS.gene003828.t1 MTR_1g063910 28.467 274 151 14 650 920 148 379 2.54e-12 70.5
MS.gene003828.t1 MTR_6g083020 24.342 304 182 13 618 920 351 607 2.59e-12 71.2
MS.gene003828.t1 MTR_1g110180 26.582 237 134 10 600 835 336 533 2.75e-12 71.2
MS.gene003828.t1 MTR_6g079540 28.054 221 114 8 625 843 436 613 3.09e-12 70.9
MS.gene003828.t1 MTR_3g086940 29.915 234 113 11 609 840 17 201 3.29e-12 69.3
MS.gene003828.t1 MTR_1g110120 24.026 308 180 13 618 921 344 601 3.82e-12 70.5
MS.gene003828.t1 MTR_6g079540 28.054 221 114 8 625 843 684 861 4.28e-12 70.9
MS.gene003828.t1 MTR_5g099130 30.189 212 105 12 629 835 123 296 4.31e-12 69.3
MS.gene003828.t1 MTR_1g081330 29.437 231 114 11 650 877 73 257 4.47e-12 70.5
MS.gene003828.t1 MTR_8g079560 33.775 151 76 6 690 840 93 219 4.47e-12 69.3
MS.gene003828.t1 MTR_7g114680 27.437 277 144 14 605 875 30 255 5.02e-12 70.5
MS.gene003828.t1 MTR_5g099130 30.189 212 105 12 629 835 130 303 5.46e-12 69.3
MS.gene003828.t1 MTR_5g099130 30.189 212 105 12 629 835 134 307 5.63e-12 69.3
MS.gene003828.t1 MTR_1g010220 29.583 240 125 10 691 921 486 690 5.82e-12 70.1
MS.gene003828.t1 MTR_7g114680 27.437 277 144 14 605 875 16 241 6.08e-12 70.1
MS.gene003828.t1 MTR_7g073520 32.692 208 95 9 638 842 182 347 6.25e-12 69.3
MS.gene003828.t1 MTR_5g064540 35.099 151 74 6 690 840 74 200 7.96e-12 67.0
MS.gene003828.t1 MTR_5g026510 28.417 278 138 12 650 920 350 573 8.07e-12 69.3
MS.gene003828.t1 MTR_3g067650 23.620 326 192 12 605 922 187 463 8.69e-12 69.3
MS.gene003828.t1 MTR_3g056025 26.667 270 129 13 650 916 75 278 9.24e-12 67.4
MS.gene003828.t1 MTR_8g100155 24.762 315 169 13 614 920 94 348 1.01e-11 68.2
MS.gene003828.t1 MTR_4g058710 27.076 277 154 12 650 920 273 507 1.06e-11 69.3
MS.gene003828.t1 MTR_8g035890 29.536 237 113 11 613 844 22 209 1.08e-11 67.0
MS.gene003828.t1 MTR_1g027460 26.190 294 150 14 648 929 71 309 1.16e-11 67.8
MS.gene003828.t1 MTR_6g044740 25.641 273 161 11 648 920 374 604 1.22e-11 68.9
MS.gene003828.t1 MTR_1g052425 24.540 326 186 13 613 920 359 642 1.26e-11 68.9
MS.gene003828.t1 MTR_6g082890 25.649 308 180 11 615 922 319 577 1.69e-11 68.6
MS.gene003828.t1 MTR_2g104790 29.091 275 144 15 650 921 166 392 1.79e-11 67.8
MS.gene003828.t1 MTR_4g128650 29.843 191 102 7 650 840 862 1020 1.86e-11 68.9
MS.gene003828.t1 MTR_4g099240 33.113 151 77 6 690 840 75 201 1.98e-11 67.0
MS.gene003828.t1 MTR_3g462390 27.124 306 168 13 618 920 148 401 2.09e-11 67.8
MS.gene003828.t1 MTR_3g099940 26.510 298 140 16 630 916 50 279 2.37e-11 66.2
MS.gene003828.t1 MTR_2g090250 24.679 312 176 13 620 928 367 622 2.51e-11 68.2
MS.gene003828.t1 MTR_4g029020 31.937 191 92 11 650 840 60 212 2.61e-11 67.4
MS.gene003828.t1 MTR_3g462390 27.124 306 168 13 618 920 36 289 3.09e-11 66.2
MS.gene003828.t1 MTR_4g109170 25.556 270 148 11 656 921 862 1082 3.25e-11 68.2
MS.gene003828.t1 MTR_5g064540 30.973 226 114 9 619 840 13 200 3.27e-11 66.2
MS.gene003828.t1 MTR_1g027160 25.338 296 150 14 648 929 44 282 3.37e-11 66.2
MS.gene003828.t1 MTR_2g016340 28.452 239 107 11 619 840 21 212 3.99e-11 66.6
MS.gene003828.t1 MTR_8g089975 29.060 234 115 10 609 840 16 200 4.06e-11 65.9
MS.gene003828.t1 MTR_6g082700 24.579 297 169 14 626 920 146 389 5.28e-11 66.2
MS.gene003828.t1 MTR_5g013550 33.113 151 77 6 690 840 76 202 5.42e-11 65.5
MS.gene003828.t1 MTR_3g056010 27.376 263 144 12 650 909 75 293 6.31e-11 65.1
MS.gene003828.t1 MTR_3g113140 27.574 272 155 11 654 922 897 1129 6.56e-11 67.0
MS.gene003828.t1 MTR_1g034030 33.113 151 77 6 690 840 94 220 8.30e-11 64.7
MS.gene003828.t1 MTR_3g069050 26.182 275 156 11 648 918 386 617 8.55e-11 66.2
MS.gene003828.t1 MTR_0015s0090 26.423 246 132 10 598 834 329 534 8.66e-11 66.2
MS.gene003828.t1 MTR_8g040300 27.426 237 118 9 613 844 16 203 8.87e-11 64.3
MS.gene003828.t1 MTR_1g039240 25.857 321 153 14 619 921 902 1155 9.08e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003828.t1 AT1G04210 54.100 939 403 10 1 926 188 1111 0.0 942
MS.gene003828.t1 AT4G31170 27.215 316 163 10 605 920 137 385 7.24e-24 105
MS.gene003828.t1 AT4G31170 27.215 316 163 10 605 920 137 385 7.24e-24 105
MS.gene003828.t1 AT4G31170 27.215 316 163 10 605 920 137 385 7.24e-24 105
MS.gene003828.t1 AT4G31170 27.215 316 163 10 605 920 137 385 7.24e-24 105
MS.gene003828.t1 AT4G31170 27.215 316 163 10 605 920 137 385 7.24e-24 105
MS.gene003828.t1 AT4G31170 27.215 316 163 10 605 920 137 385 7.24e-24 105
MS.gene003828.t1 AT4G31170 27.215 316 163 10 605 920 137 385 7.24e-24 105
MS.gene003828.t1 AT2G24360 26.453 344 169 12 593 920 109 384 5.69e-23 103
MS.gene003828.t1 AT1G63700 28.889 270 120 10 650 916 450 650 3.69e-20 97.1
MS.gene003828.t1 AT1G63700 28.889 270 120 10 650 916 450 650 3.69e-20 97.1
MS.gene003828.t1 AT5G66850 27.273 308 149 11 619 923 369 604 7.56e-19 92.4
MS.gene003828.t1 AT5G66850 27.597 308 148 11 619 923 369 604 7.84e-19 92.4
MS.gene003828.t1 AT4G08500 30.872 298 135 12 619 916 355 581 1.18e-18 91.7
MS.gene003828.t1 AT5G50180 29.653 317 150 13 617 927 38 287 3.55e-18 87.8
MS.gene003828.t1 AT1G62400 28.000 300 149 11 622 920 107 340 6.60e-18 87.4
MS.gene003828.t1 AT4G31170 30.198 202 104 7 605 806 137 301 1.09e-17 85.5
MS.gene003828.t1 AT4G31170 30.198 202 104 7 605 806 137 301 1.09e-17 85.5
MS.gene003828.t1 AT4G31170 30.198 202 104 7 605 806 137 301 1.09e-17 85.5
MS.gene003828.t1 AT4G12020 31.878 229 94 8 691 916 1627 1796 2.19e-17 88.6
MS.gene003828.t1 AT4G12020 31.878 229 94 8 691 916 1702 1871 2.21e-17 88.6
MS.gene003828.t1 AT4G12020 31.878 229 94 8 691 916 1694 1863 2.32e-17 88.2
MS.gene003828.t1 AT3G27560 29.555 247 123 8 690 932 99 298 5.41e-17 84.3
MS.gene003828.t1 AT3G46930 30.000 220 108 8 624 840 128 304 1.30e-16 82.8
MS.gene003828.t1 AT3G46930 30.137 219 109 8 624 840 224 400 1.41e-16 84.0
MS.gene003828.t1 AT3G46930 30.594 219 108 9 624 840 224 400 1.86e-16 83.6
MS.gene003828.t1 AT3G63260 25.610 328 178 11 605 920 89 362 1.97e-16 82.8
MS.gene003828.t1 AT3G46930 30.000 220 108 8 624 840 189 365 2.35e-16 82.8
MS.gene003828.t1 AT3G46930 30.088 226 113 9 618 840 217 400 3.09e-16 83.6
MS.gene003828.t1 AT4G08470 30.224 268 120 10 649 916 351 551 4.74e-16 83.2
MS.gene003828.t1 AT3G46930 30.088 226 113 9 618 840 182 365 5.82e-16 82.4
MS.gene003828.t1 AT4G08470 30.224 268 120 10 649 916 269 469 7.91e-16 82.0
MS.gene003828.t1 AT5G58950 27.350 234 123 7 611 840 219 409 9.07e-16 82.0
MS.gene003828.t1 AT3G53930 30.732 205 98 8 641 842 58 221 1.77e-15 81.6
MS.gene003828.t1 AT3G53930 30.732 205 98 8 641 842 58 221 1.79e-15 81.6
MS.gene003828.t1 AT3G61960 28.936 235 121 11 609 842 22 211 2.54e-15 80.9
MS.gene003828.t1 AT3G61960 28.936 235 121 11 609 842 22 211 2.74e-15 80.5
MS.gene003828.t1 AT5G50000 25.538 325 173 11 611 920 86 356 3.39e-15 79.0
MS.gene003828.t1 AT1G69220 28.846 312 151 16 610 916 252 497 3.70e-15 80.9
MS.gene003828.t1 AT4G38470 27.562 283 158 12 579 860 270 506 4.04e-15 80.1
MS.gene003828.t1 AT4G38470 27.562 283 158 12 579 860 270 506 4.35e-15 79.7
MS.gene003828.t1 AT4G14480 25.000 296 170 10 624 916 41 287 4.83e-15 79.3
MS.gene003828.t1 AT3G06030 30.000 200 84 7 650 840 121 273 6.33e-15 79.7
MS.gene003828.t1 AT2G37840 28.505 214 114 10 630 842 38 213 6.54e-15 79.7
MS.gene003828.t1 AT5G03730 30.000 240 123 11 603 840 555 751 8.02e-15 79.7
MS.gene003828.t1 AT5G03730 30.000 240 123 11 603 840 555 751 8.02e-15 79.7
MS.gene003828.t1 AT1G69220 28.664 307 148 16 615 916 230 470 1.16e-14 79.0
MS.gene003828.t1 AT5G40540 29.630 243 118 8 690 927 2 196 1.19e-14 75.5
MS.gene003828.t1 AT3G63260 27.935 247 140 8 605 840 89 308 1.26e-14 77.0
MS.gene003828.t1 AT4G24480 26.115 314 161 12 609 920 679 923 1.40e-14 79.0
MS.gene003828.t1 AT4G24480 26.115 314 161 12 609 920 679 923 1.46e-14 79.0
MS.gene003828.t1 AT5G40540 29.630 243 118 8 690 927 23 217 2.19e-14 75.1
MS.gene003828.t1 AT3G22750 25.993 277 146 10 650 920 126 349 3.02e-14 76.3
MS.gene003828.t1 AT3G46160 29.630 189 107 7 648 835 105 268 3.06e-14 76.3
MS.gene003828.t1 AT4G08480 27.517 298 145 10 619 916 523 749 3.66e-14 77.4
MS.gene003828.t1 AT1G49180 33.333 153 78 6 690 842 80 208 4.04e-14 75.9
MS.gene003828.t1 AT5G40540 29.536 237 114 8 690 921 99 287 4.09e-14 75.5
MS.gene003828.t1 AT5G11850 26.953 256 139 11 613 865 623 833 4.83e-14 77.0
MS.gene003828.t1 AT1G49180 33.333 153 78 6 690 842 80 208 4.93e-14 75.9
MS.gene003828.t1 AT2G35620 28.832 274 142 10 650 920 348 571 5.22e-14 76.6
MS.gene003828.t1 AT2G35620 28.832 274 142 10 650 920 348 571 5.22e-14 76.6
MS.gene003828.t1 AT2G35620 28.832 274 142 10 650 920 348 571 5.22e-14 76.6
MS.gene003828.t1 AT2G35620 28.832 274 142 10 650 920 348 571 5.22e-14 76.6
MS.gene003828.t1 AT3G01490 24.299 321 186 11 605 920 114 382 5.34e-14 75.5
MS.gene003828.t1 AT5G18700 28.372 215 112 8 648 860 44 218 6.89e-14 77.0
MS.gene003828.t1 AT5G50000 27.459 244 136 8 611 840 86 302 1.16e-13 73.9
MS.gene003828.t1 AT1G67890 28.440 218 110 9 625 840 511 684 3.04e-13 74.3
MS.gene003828.t1 AT1G67890 28.440 218 110 9 625 840 511 684 4.28e-13 73.9
MS.gene003828.t1 AT1G67890 28.440 218 110 9 625 840 511 684 4.28e-13 73.9
MS.gene003828.t1 AT4G24480 25.397 315 167 12 609 920 679 928 4.33e-13 73.9
MS.gene003828.t1 AT5G38210 25.083 303 181 10 618 920 386 642 5.60e-13 73.6
MS.gene003828.t1 AT1G25390 25.733 307 174 15 618 919 307 564 5.83e-13 73.2
MS.gene003828.t1 AT1G25390 25.733 307 174 15 618 919 307 564 5.83e-13 73.2
MS.gene003828.t1 AT1G67890 28.440 218 110 9 625 840 383 556 6.12e-13 73.2
MS.gene003828.t1 AT5G38210 25.083 303 181 10 618 920 368 624 6.62e-13 73.2
MS.gene003828.t1 AT1G08720 27.155 232 122 8 618 843 680 870 6.79e-13 73.6
MS.gene003828.t1 AT1G08720 27.155 232 122 8 618 843 680 870 7.16e-13 73.2
MS.gene003828.t1 AT1G66880 26.752 314 166 13 618 922 362 620 8.23e-13 72.8
MS.gene003828.t1 AT5G38210 25.083 303 181 10 618 920 374 630 8.70e-13 72.8
MS.gene003828.t1 AT1G66880 26.752 314 166 13 618 922 604 862 9.47e-13 72.8
MS.gene003828.t1 AT1G18390 24.116 311 186 12 618 928 354 614 9.87e-13 72.8
MS.gene003828.t1 AT2G23030 31.064 235 109 12 609 840 16 200 1.49e-12 70.5
MS.gene003828.t1 AT1G24030 27.306 271 143 12 650 913 18 241 1.57e-12 69.3
MS.gene003828.t1 AT1G76360 27.465 284 157 15 650 930 217 454 1.67e-12 71.2
MS.gene003828.t1 AT4G36180 27.636 275 154 10 650 922 885 1116 1.75e-12 72.4
MS.gene003828.t1 AT1G18390 24.116 311 186 12 618 928 360 620 1.77e-12 71.6
MS.gene003828.t1 AT1G24030 27.306 271 143 12 650 913 55 278 1.78e-12 69.7
MS.gene003828.t1 AT1G24030 27.306 271 143 12 650 913 109 332 2.06e-12 70.5
MS.gene003828.t1 AT2G39110 27.372 274 155 13 650 920 140 372 2.30e-12 70.9
MS.gene003828.t1 AT1G66880 27.358 318 159 15 618 922 983 1241 2.73e-12 71.6
MS.gene003828.t1 AT1G24030 27.306 271 143 12 650 913 123 346 3.11e-12 69.7
MS.gene003828.t1 AT5G15730 25.392 319 168 12 611 921 118 374 3.14e-12 70.5
MS.gene003828.t1 AT2G39110 27.737 274 154 13 650 920 125 357 3.23e-12 70.1
MS.gene003828.t1 AT2G42550 27.083 288 149 16 644 924 45 278 3.36e-12 69.3
MS.gene003828.t1 AT5G06740 25.449 334 182 15 603 925 334 611 3.60e-12 70.9
MS.gene003828.t1 AT3G45790 32.124 193 105 7 648 837 138 307 3.77e-12 69.7
MS.gene003828.t1 AT5G06740 25.449 334 182 15 603 925 346 623 4.23e-12 70.5
MS.gene003828.t1 AT3G08720 30.303 264 120 14 614 867 157 366 4.33e-12 70.1
MS.gene003828.t1 AT3G08720 30.303 264 120 14 614 867 157 366 4.33e-12 70.1
MS.gene003828.t1 AT3G08720 30.303 264 120 14 614 867 157 366 4.33e-12 70.1
MS.gene003828.t1 AT3G08720 30.303 264 120 14 614 867 157 366 4.33e-12 70.1
MS.gene003828.t1 AT5G57610 29.319 191 103 6 650 840 832 990 4.50e-12 70.9
MS.gene003828.t1 AT3G08730 29.787 235 110 10 619 842 143 333 5.33e-12 69.7
MS.gene003828.t1 AT3G08730 29.787 235 110 10 619 842 143 333 5.33e-12 69.7
MS.gene003828.t1 AT5G63650 34.437 151 75 6 690 840 74 200 5.95e-12 68.9
MS.gene003828.t1 AT2G35050 27.459 244 140 9 599 840 974 1182 6.32e-12 70.5
MS.gene003828.t1 AT2G35050 27.459 244 140 9 599 840 974 1182 6.32e-12 70.5
MS.gene003828.t1 AT3G04530 34.337 166 84 6 690 855 86 226 6.41e-12 67.8
MS.gene003828.t1 AT1G49160 28.139 231 117 10 650 877 59 243 6.54e-12 69.7
MS.gene003828.t1 AT1G49160 28.139 231 117 10 650 877 77 261 6.77e-12 69.7
MS.gene003828.t1 AT5G08590 33.775 151 76 6 690 840 74 200 7.28e-12 68.6
MS.gene003828.t1 AT1G24030 31.414 191 90 9 650 835 109 263 8.74e-12 67.4
MS.gene003828.t1 AT5G55830 24.367 316 180 11 615 920 373 639 9.16e-12 69.7
MS.gene003828.t1 AT5G15730 25.078 319 171 12 611 921 118 376 9.19e-12 68.9
MS.gene003828.t1 AT5G15730 25.078 319 171 12 611 921 118 376 9.19e-12 68.9
MS.gene003828.t1 AT3G01490 24.896 241 150 8 605 840 114 328 1.03e-11 68.2
MS.gene003828.t1 AT1G49160 28.139 231 117 11 650 877 124 308 1.38e-11 68.9
MS.gene003828.t1 AT1G31420 28.417 278 138 12 650 920 350 573 1.46e-11 68.6
MS.gene003828.t1 AT2G23450 24.922 321 184 12 604 920 353 620 1.57e-11 68.9
MS.gene003828.t1 AT2G23450 24.922 321 184 12 604 920 353 620 1.57e-11 68.9
MS.gene003828.t1 AT3G46140 31.606 193 106 7 648 837 138 307 2.27e-11 67.4
MS.gene003828.t1 AT4G14780 23.692 325 181 11 612 922 66 337 2.38e-11 67.0
MS.gene003828.t1 AT5G08590 33.108 148 75 6 693 840 1 124 2.95e-11 65.9
MS.gene003828.t1 AT5G40540 32.919 161 82 6 690 845 99 238 3.86e-11 65.5
MS.gene003828.t1 AT5G07180 28.159 277 141 11 650 921 599 822 5.88e-11 67.0
MS.gene003828.t1 AT5G07180 28.159 277 141 11 650 921 695 918 6.04e-11 67.0
MS.gene003828.t1 AT4G33950 33.113 151 77 6 690 840 91 217 6.09e-11 65.5
MS.gene003828.t1 AT1G49160 28.085 235 120 11 650 881 124 312 6.15e-11 66.6
MS.gene003828.t1 AT4G40010 33.987 153 73 7 690 840 74 200 6.36e-11 65.5
MS.gene003828.t1 AT2G39660 32.105 190 93 10 648 835 119 274 7.40e-11 65.9

Find 176 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTTGCAAATTCCATATTT+TGG 0.121009 4.2:-38010823 MS.gene003828:CDS
TCAAAATGTTAGTGAGATTT+AGG 0.187238 4.2:-38010429 None:intergenic
TGCTAGTTGAAAGAGGAATT+TGG 0.193301 4.2:+38012594 None:intergenic
CTCTTTGTATCTGATCATTT+TGG 0.207442 4.2:-38014385 MS.gene003828:CDS
AAACTTCGAATATAATTCTT+TGG 0.223578 4.2:-38012271 MS.gene003828:CDS
GAAAAGGTTTCCTCACTTTC+CGG 0.228525 4.2:+38015587 None:intergenic
TCTAATTTGAAGCAGTTAAA+TGG 0.238157 4.2:-38014469 MS.gene003828:CDS
GTCATTTGGATGTTTACTTC+TGG 0.243782 4.2:-38010854 MS.gene003828:CDS
CTGTACCTTGCGAGCTAGTT+AGG 0.260994 4.2:-38013952 MS.gene003828:CDS
ACTATCAAGGTTGGAGAGTT+TGG 0.263545 4.2:-38017693 MS.gene003828:CDS
AGGGCACGCAAATCTGTTTC+TGG 0.277854 4.2:-38014334 MS.gene003828:CDS
TTGGGAGAAATCAGAATTCT+TGG 0.296196 4.2:-38012252 MS.gene003828:CDS
TGCAACAGGAAGCTGATATT+TGG 0.296255 4.2:-38010876 MS.gene003828:intron
TTCATGGATATGCTGTAATA+TGG 0.300573 4.2:-38015687 MS.gene003828:CDS
TTCACTTTGCCCATTGTCTA+AGG 0.302512 4.2:+38014992 None:intergenic
ACATTAGTTCGGTGCAAATA+TGG 0.314424 4.2:-38012500 MS.gene003828:CDS
GAAGCTGATATTTGGTCATT+TGG 0.319323 4.2:-38010868 MS.gene003828:CDS
GAATCAGGTACTCCAAAATA+TGG 0.324280 4.2:+38010811 None:intergenic
TGTGTCCAAGCAGCATTTCA+TGG 0.327851 4.2:+38010468 None:intergenic
GTTTGGACCTGTCAAATAAT+AGG 0.330672 4.2:-38017676 MS.gene003828:CDS
CTTTATTAAAATGATATTCC+AGG 0.331643 4.2:+38013904 None:intergenic
AACTTCGAATATAATTCTTT+GGG 0.342287 4.2:-38012270 MS.gene003828:CDS
GCTAGTTGAAAGAGGAATTT+GGG 0.343487 4.2:+38012595 None:intergenic
CCCTGTATAGTGGAAATATA+TGG 0.351120 4.2:-38012216 MS.gene003828:CDS
TTTCTAGACTTGCAGGGTTT+AGG 0.352330 4.2:+38014891 None:intergenic
TCCATATATTTCCACTATAC+AGG 0.354739 4.2:+38012215 None:intergenic
AGAAAGATTGATATCTTCTA+TGG 0.358775 4.2:+38014225 None:intergenic
CCGTTTACCTGATGACTTCC+AGG 0.365094 4.2:+38015373 None:intergenic
TAGCAGTTCTTCTGTTGAAA+TGG 0.366960 4.2:-38015630 MS.gene003828:CDS
CAGACAAAGGGATGAAGAAT+TGG 0.371121 4.2:-38014524 MS.gene003828:CDS
AGATGTCTCATGCGCTTTGT+TGG 0.376947 4.2:-38011934 MS.gene003828:CDS
GAATAACATACCTGTCTAAC+AGG 0.382077 4.2:+38014703 None:intergenic
TGCCATTCTGCTATCTGCTC+AGG 0.382902 4.2:-38014500 MS.gene003828:CDS
AATTCAATCATTGTTCCAAT+TGG 0.383287 4.2:-38014160 MS.gene003828:CDS
ACTTCAGAACTTAAGTCTTC+AGG 0.383512 4.2:-38017612 MS.gene003828:intron
ATTTATACTCGTGCTGCTTC+CGG 0.384916 4.2:+38014273 None:intergenic
TAGTCCATATGCATGATATT+TGG 0.388291 4.2:+38012190 None:intergenic
AGAGATGGAAAGGAATTATC+AGG 0.388777 4.2:+38012560 None:intergenic
AATTTCTGAACCAGAAAATC+TGG 0.389574 4.2:-38015222 MS.gene003828:CDS
TGTACCTTGCGAGCTAGTTA+GGG 0.390296 4.2:-38013951 MS.gene003828:CDS
TCAGCTGTAGGTCGTTCATT+TGG 0.397022 4.2:+38010497 None:intergenic
ACATTCTGTTCGATTGTGAT+AGG 0.397749 4.2:-38011866 MS.gene003828:CDS
TAAATACCTGCAGAAATATT+CGG 0.413886 4.2:+38013811 None:intergenic
TAATTCTCAAGAGGCATAAA+CGG 0.413925 4.2:+38014762 None:intergenic
CGAGCTAGTTAGGGGTTACC+TGG 0.417649 4.2:-38013942 MS.gene003828:CDS
CTATCATGGACGTGTGAATC+AGG 0.417672 4.2:+38010796 None:intergenic
AGAAGATATCAATCTTTCTA+TGG 0.419967 4.2:-38014221 MS.gene003828:CDS
TCCTTGTTGATTTGTTTCAT+AGG 0.420696 4.2:-38010535 MS.gene003828:CDS
GACACCAAATATCATGCATA+TGG 0.428562 4.2:-38012194 MS.gene003828:CDS
TACATAGTTCGCATGACCTC+TGG 0.430682 4.2:+38011699 None:intergenic
TCTTCTATGGCATTAACAAC+TGG 0.431884 4.2:+38014238 None:intergenic
AAGCTTTAACTACATTAGTT+CGG 0.434269 4.2:-38012511 MS.gene003828:CDS
CCAATTGGCTCTGTTCAGTA+CGG 0.434843 4.2:-38014145 MS.gene003828:CDS
AGACAATGGGCAAAGTGAAC+AGG 0.437742 4.2:-38014988 MS.gene003828:CDS
TCTGCTATCTGCTCAGGGAC+TGG 0.440616 4.2:-38014494 MS.gene003828:CDS
AATAATAGGTTGACTTCGTT+AGG 0.441910 4.2:-38017662 MS.gene003828:CDS
ACGCTTGAAGAGATGGTATC+AGG 0.444138 4.2:+38015434 None:intergenic
CAATTGGCTCTGTTCAGTAC+GGG 0.446917 4.2:-38014144 MS.gene003828:CDS
CAAAGCGCATGAGACATCTT+TGG 0.448446 4.2:+38011938 None:intergenic
TGTCTATGAAAGCAATTTGC+CGG 0.448891 4.2:-38015606 MS.gene003828:CDS
AACAAAGAGGCATTCAGATC+GGG 0.450284 4.2:-38014925 MS.gene003828:CDS
GATCTCAACACTCGATGCTT+CGG 0.450332 4.2:+38012150 None:intergenic
ACCTCCTCCTTCTTTGTGCG+TGG 0.454273 4.2:-38011742 MS.gene003828:CDS
GGATCTTCTTGCTTAACAAC+TGG 0.458038 4.2:+38015249 None:intergenic
TTTGTTGTGTTTCAGACAAA+GGG 0.459672 4.2:-38014536 MS.gene003828:intron
GATTCAATCTGGTGAAGAGC+TGG 0.462255 4.2:-38010591 MS.gene003828:CDS
TGGAAAGGAATTATCAGGAC+TGG 0.466721 4.2:+38012565 None:intergenic
CGGCTTTGACCTCACTATCA+AGG 0.467927 4.2:-38017706 MS.gene003828:CDS
CATAAAAGCCATCTGATAGA+TGG 0.470894 4.2:+38014802 None:intergenic
TCAACTTCATCCTGGCTCCC+AGG 0.471851 4.2:+38014436 None:intergenic
TCACCAGATTGAATCATTGT+GGG 0.475459 4.2:+38010599 None:intergenic
TTCTCTTCTCTAATATCATA+CGG 0.478423 4.2:+38013839 None:intergenic
GAACCCACAATGATTCAATC+TGG 0.478717 4.2:-38010602 MS.gene003828:CDS
TCATGGATTTCTTCAGCTGT+AGG 0.478876 4.2:+38010485 None:intergenic
TAATAAAGAGGAGTGATACA+TGG 0.481610 4.2:-38013889 MS.gene003828:CDS
TTTAAACAAACCTGGGAGCC+AGG 0.485820 4.2:-38014446 MS.gene003828:CDS
TCCTCATGCTCCTTAGACAA+TGG 0.486313 4.2:-38015002 MS.gene003828:CDS
CCTCATGCTCCTTAGACAAT+GGG 0.486998 4.2:-38015001 MS.gene003828:CDS
CTAGAGAAGTTGTCAGAAGC+TGG 0.492700 4.2:-38011999 MS.gene003828:CDS
TTTGCAGCCTGGAAGTCATC+AGG 0.492845 4.2:-38015380 MS.gene003828:CDS
TGTTAATACGCTTGAAGAGA+TGG 0.503360 4.2:+38015427 None:intergenic
TGTCTCAGACAATGGAAGCC+TGG 0.503746 4.2:-38015168 MS.gene003828:CDS
GTCGAACATGTACAGACAAA+AGG 0.504161 4.2:+38014295 None:intergenic
ATAGAGGTGCTATTATAGAA+AGG 0.506477 4.2:-38014354 MS.gene003828:CDS
AAACAAAGAGGCATTCAGAT+CGG 0.509562 4.2:-38014926 MS.gene003828:CDS
AGGTGCCTCACCATGAGAAA+AGG 0.512326 4.2:+38015571 None:intergenic
CCTGGAAGTCATCAGGTAAA+CGG 0.512547 4.2:-38015373 MS.gene003828:CDS
TTCACCAGATTGAATCATTG+TGG 0.512647 4.2:+38010598 None:intergenic
GTGAAGTCATCCTGTTAGAC+AGG 0.516811 4.2:-38014713 MS.gene003828:intron
CCATATATTTCCACTATACA+GGG 0.519179 4.2:+38012216 None:intergenic
GCATGTAGAGGTGATCTTAG+TGG 0.520766 4.2:+38011789 None:intergenic
CGTGGGAACACCTCGGTGGA+TGG 0.522173 4.2:-38011724 MS.gene003828:CDS
TGTGATAGGAAGAGAGATGA+TGG 0.522468 4.2:-38011852 MS.gene003828:CDS
AAGTCAACCTATTATTTGAC+AGG 0.526361 4.2:+38017669 None:intergenic
GAAAGTTGCGAATAATAAGT+TGG 0.526712 4.2:-38017741 MS.gene003828:CDS
TTCTGACAACTTCTCTAGAT+AGG 0.527799 4.2:+38012004 None:intergenic
GGTGTTCCCACGCACAAAGA+AGG 0.531621 4.2:+38011735 None:intergenic
CCTCCTCCTTCTTTGTGCGT+GGG 0.535678 4.2:-38011741 MS.gene003828:CDS
TTAAATGGTTTAAACAAACC+TGG 0.536201 4.2:-38014454 MS.gene003828:CDS
ACCATACCTGCAGACTATCA+TGG 0.538917 4.2:+38010782 None:intergenic
CCGTACTGAACAGAGCCAAT+TGG 0.539320 4.2:+38014145 None:intergenic
CTTGATAGTGAGGTCAAAGC+CGG 0.546797 4.2:+38017707 None:intergenic
GGAAAGGAATTATCAGGACT+GGG 0.546960 4.2:+38012566 None:intergenic
GGTGCGTACTTTGGAAGTAC+AGG 0.548062 4.2:-38012316 MS.gene003828:CDS
GCCATTCTGCTATCTGCTCA+GGG 0.549712 4.2:-38014499 MS.gene003828:CDS
TAGAGGTGCTATTATAGAAA+GGG 0.552194 4.2:-38014353 MS.gene003828:CDS
TGTAATATGGAAGGAAATGA+TGG 0.557258 4.2:-38015674 MS.gene003828:CDS
TTCAAAGAACTAATCTCTGA+AGG 0.559343 4.2:+38017779 None:intergenic
GGAAGAATGCTAGTTGAAAG+AGG 0.559676 4.2:+38012587 None:intergenic
CATCAGGTAAACGGTGGAAG+CGG 0.559694 4.2:-38015364 MS.gene003828:CDS
GAAATCCATGAAATGCTGCT+TGG 0.560516 4.2:-38010473 MS.gene003828:CDS
CTAACTAGCTCGCAAGGTAC+AGG 0.561580 4.2:+38013953 None:intergenic
TCTAGAAAACCGATTGGTGA+TGG 0.563245 4.2:-38014876 MS.gene003828:CDS
TCATCACAATTAGAGAGAGA+TGG 0.564212 4.2:+38012545 None:intergenic
TTTCTGGTTCAGAAATTCTG+TGG 0.566187 4.2:+38015228 None:intergenic
TAAGTTGGTGGAGTTACCGC+CGG 0.566822 4.2:-38017726 MS.gene003828:CDS
ACCTCGGTGGATGGCTCCAG+AGG 0.567188 4.2:-38011715 MS.gene003828:CDS
TTTGACCTCACTATCAAGGT+TGG 0.568167 4.2:-38017702 MS.gene003828:CDS
ATATACAACGCTAACTCCAC+AGG 0.568710 4.2:+38011963 None:intergenic
AATAATGAGCCATCACCAAT+CGG 0.568980 4.2:+38014867 None:intergenic
CTGTTCAGTACGGGGTCTGT+AGG 0.569511 4.2:-38014135 MS.gene003828:CDS
GCAAGTTATCAACTTCATCC+TGG 0.570651 4.2:+38014428 None:intergenic
CTTTGTGCGTGGGAACACCT+CGG 0.570842 4.2:-38011731 MS.gene003828:CDS
ATGGAAGGAAATGATGGTGA+TGG 0.574126 4.2:-38015668 MS.gene003828:CDS
ACAATTAGAGAGAGATGGAA+AGG 0.575155 4.2:+38012550 None:intergenic
AAGACACCGAATATTTCTGC+AGG 0.576402 4.2:-38013817 MS.gene003828:intron
TAAATGGTTTAAACAAACCT+GGG 0.580803 4.2:-38014453 MS.gene003828:CDS
TTTGTCTGTACATGTTCGAC+CGG 0.585419 4.2:-38014292 MS.gene003828:CDS
CCCATTGTCTAAGGAGCATG+AGG 0.585844 4.2:+38015001 None:intergenic
ACACGTCCATGATAGTCTGC+AGG 0.585863 4.2:-38010788 MS.gene003828:intron
TGGATATGCTGTAATATGGA+AGG 0.587537 4.2:-38015683 MS.gene003828:CDS
GGTGTTGTAGGTGCGTACTT+TGG 0.587946 4.2:-38012325 MS.gene003828:intron
AAGCAATTTGCCGGAAAGTG+AGG 0.588042 4.2:-38015597 MS.gene003828:CDS
CTTCTCTAATATCATACGGT+CGG 0.588545 4.2:+38013843 None:intergenic
ACAGAAACTGTCTCAGACAA+TGG 0.589068 4.2:-38015176 MS.gene003828:CDS
AATAAAGAGGAGTGATACAT+GGG 0.592176 4.2:-38013888 MS.gene003828:CDS
ATCAGTTGAGGCTGCTGTGA+AGG 0.593727 4.2:-38012477 MS.gene003828:intron
ACAGTATTTATGTGATCACA+TGG 0.594608 4.2:-38013981 MS.gene003828:intron
GGAATTTGGGTTCGACGAAG+AGG 0.596421 4.2:+38012608 None:intergenic
AGCAGAAAGCTCGTCAAGAG+CGG 0.600768 4.2:-38015310 MS.gene003828:CDS
TTTATGGAATATGTGAAAGG+GGG 0.604311 4.2:-38012120 MS.gene003828:CDS
TCTAGCTCATCAGTTAGTTG+TGG 0.605980 4.2:+38010644 None:intergenic
GGTTGAATAACAGCAGGAAG+TGG 0.607940 4.2:-38015289 MS.gene003828:CDS
ATTGAGGACCATCTATCAGA+TGG 0.610301 4.2:-38014810 MS.gene003828:CDS
AAGAGCGGTTGAATAACAGC+AGG 0.611135 4.2:-38015295 MS.gene003828:CDS
ATATTACAGCATATCCATGA+AGG 0.615260 4.2:+38015689 None:intergenic
AGTTGCGAATAATAAGTTGG+TGG 0.615889 4.2:-38017738 MS.gene003828:CDS
AATTGGCTCTGTTCAGTACG+GGG 0.618154 4.2:-38014143 MS.gene003828:CDS
TGCAAGTCTAGAAAACCGAT+TGG 0.618653 4.2:-38014882 MS.gene003828:CDS
ATATGGACTATCTCAGCTGA+TGG 0.626899 4.2:-38012177 MS.gene003828:CDS
TGATAATATCGACAATGATG+AGG 0.632731 4.2:-38015093 MS.gene003828:CDS
GCAATACAGCATGCATGTAG+AGG 0.633551 4.2:+38011777 None:intergenic
ACTCTCCAACCTTGATAGTG+AGG 0.636026 4.2:+38017697 None:intergenic
ACAACTAACTGATGAGCTAG+AGG 0.640084 4.2:-38010642 MS.gene003828:CDS
TAACCCCTAACTAGCTCGCA+AGG 0.640861 4.2:+38013947 None:intergenic
AAATCACAGAGCTTCACAGT+GGG 0.643973 4.2:+38011825 None:intergenic
GCATGCTGTATTGCTCATGT+AGG 0.645157 4.2:-38011768 MS.gene003828:CDS
GTTCCCACGCACAAAGAAGG+AGG 0.646977 4.2:+38011738 None:intergenic
CCCACGCACAAAGAAGGAGG+AGG 0.648018 4.2:+38011741 None:intergenic
GTACCTTGCGAGCTAGTTAG+GGG 0.648639 4.2:-38013950 MS.gene003828:CDS
GTGCAAATATGGATCAGTTG+AGG 0.652715 4.2:-38012489 MS.gene003828:CDS
TCCCTGAGCAGATAGCAGAA+TGG 0.660194 4.2:+38014498 None:intergenic
ACTAGCTCGCAAGGTACAGG+TGG 0.663189 4.2:+38013956 None:intergenic
AAAATGATATTCCAGGCATG+TGG 0.666273 4.2:+38013911 None:intergenic
AATAACAGCAGGAAGTGGAA+AGG 0.667194 4.2:-38015284 MS.gene003828:CDS
AAAACATCTACTGTTAGATG+AGG 0.669477 4.2:+38015400 None:intergenic
AATGGGCAAAGTGAACAGGA+TGG 0.677892 4.2:-38014984 MS.gene003828:CDS
GGAAGTCATCAGGTAAACGG+TGG 0.680297 4.2:-38015370 MS.gene003828:CDS
ACCTATGAAACAAATCAACA+AGG 0.683231 4.2:+38010534 None:intergenic
GATAGTGAGGTCAAAGCCGG+CGG 0.688135 4.2:+38017710 None:intergenic
TGATTTGTTTCATAGGTGCG+TGG 0.700976 4.2:-38010528 MS.gene003828:CDS
ACCTCTGGAGCCATCCACCG+AGG 0.713982 4.2:+38011714 None:intergenic
CATATATTTCCACTATACAG+GGG 0.717541 4.2:+38012217 None:intergenic
TGGTGAAAAGCATGTTCCTG+TGG 0.718899 4.2:-38011979 MS.gene003828:CDS
AAAATCACAGAGCTTCACAG+TGG 0.725075 4.2:+38011824 None:intergenic
TGTGCGTGGGAACACCTCGG+TGG 0.757904 4.2:-38011728 MS.gene003828:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.2 gene 38010430 38017813 38010430 ID=MS.gene003828
chr4.2 mRNA 38010430 38017813 38010430 ID=MS.gene003828.t1;Parent=MS.gene003828
chr4.2 exon 38017613 38017813 38017613 ID=MS.gene003828.t1.exon1;Parent=MS.gene003828.t1
chr4.2 CDS 38017613 38017813 38017613 ID=cds.MS.gene003828.t1;Parent=MS.gene003828.t1
chr4.2 exon 38015582 38015741 38015582 ID=MS.gene003828.t1.exon2;Parent=MS.gene003828.t1
chr4.2 CDS 38015582 38015741 38015582 ID=cds.MS.gene003828.t1;Parent=MS.gene003828.t1
chr4.2 exon 38014714 38015458 38014714 ID=MS.gene003828.t1.exon3;Parent=MS.gene003828.t1
chr4.2 CDS 38014714 38015458 38014714 ID=cds.MS.gene003828.t1;Parent=MS.gene003828.t1
chr4.2 exon 38014114 38014543 38014114 ID=MS.gene003828.t1.exon4;Parent=MS.gene003828.t1
chr4.2 CDS 38014114 38014543 38014114 ID=cds.MS.gene003828.t1;Parent=MS.gene003828.t1
chr4.2 exon 38013818 38013999 38013818 ID=MS.gene003828.t1.exon5;Parent=MS.gene003828.t1
chr4.2 CDS 38013818 38013999 38013818 ID=cds.MS.gene003828.t1;Parent=MS.gene003828.t1
chr4.2 exon 38012478 38012637 38012478 ID=MS.gene003828.t1.exon6;Parent=MS.gene003828.t1
chr4.2 CDS 38012478 38012637 38012478 ID=cds.MS.gene003828.t1;Parent=MS.gene003828.t1
chr4.2 exon 38012110 38012337 38012110 ID=MS.gene003828.t1.exon7;Parent=MS.gene003828.t1
chr4.2 CDS 38012110 38012337 38012110 ID=cds.MS.gene003828.t1;Parent=MS.gene003828.t1
chr4.2 exon 38011677 38012027 38011677 ID=MS.gene003828.t1.exon8;Parent=MS.gene003828.t1
chr4.2 CDS 38011677 38012027 38011677 ID=cds.MS.gene003828.t1;Parent=MS.gene003828.t1
chr4.2 exon 38010789 38010890 38010789 ID=MS.gene003828.t1.exon9;Parent=MS.gene003828.t1
chr4.2 CDS 38010789 38010890 38010789 ID=cds.MS.gene003828.t1;Parent=MS.gene003828.t1
chr4.2 exon 38010430 38010678 38010430 ID=MS.gene003828.t1.exon10;Parent=MS.gene003828.t1
chr4.2 CDS 38010430 38010678 38010430 ID=cds.MS.gene003828.t1;Parent=MS.gene003828.t1
Gene Sequence

>MS.gene003828

ATGAAGACATTGCCTTCAGAGATTAGTTCTTTGAAAGCATTAATATCGATGAAAGTTGCGAATAATAAGTTGGTGGAGTTACCGCCGGCTTTGACCTCACTATCAAGGTTGGAGAGTTTGGACCTGTCAAATAATAGGTTGACTTCGTTAGGATCACTTGAACTTAGCTCAATGCATAGACTTCAGAACTTAAGTCTTCAGGTACCTTGCTTTGATTTGTAAATCGTGCTAATTCTGCAAAAATGAGGTTTTTTAAGTATCTGCGTTCTTAGATGGTGCTTTTGCTGCTTCTGACTTTGCTTTGTGTGTGGGTTTTTATGTATACTGGTTTTGCTTAAATATTCCCGCTTCTATCATGGGATGAAGAATATATATTAAAACCCTGTACCCTTTTACAAATTCGTTGTGAAGAGGGAGGGGGATTAGAGTGGATTAGAGTATAGTGTAGGAGTAGGACTTGGGAGAGAAGAGAGTGAAACTGAAAGTTTTACAGAAAAAATTCAATAACATTAATGCTTGTTTAAAAATGAATAAAGAGAGGACTAGAGTGCAATTTCACTTGAAATGAACACTCGCCACCCTTGTTCTTGTAATGACGTGACACTTTATCCCCTAGATCTAATGTCCGTTTGACACAAGGATCTTTTTGCTGCTTCTTCTTTCTTGGTTCTTTCCTTTTGTATTAATCTTCCTCCCCATCAATTAAATTAATTAATTAATCTTCCTCCCCATTAATTAAATTAATTAAATAGTATATATTTATGAAATTTTTCTGCCTTTCTTGTGCAACGTGTCATCCTATAACAACACCATCGAGCCAGCAACTAATGCTTCTGTTGTGTGTGAGAGAGAGAGAGAGAGACATTTATAACGTTGTTGAAATGTAAAACGGGAAAATATAACTTGATTAAGTTCAATAACCATTTATAGAAGAATAATATTAAGAGAGAAAGAATGAGAAACTGTGCACCAATCTAGATTTGGTGTGCCAAGGACCATAGCCATTAAGTGCTATGTATTTCTTGAAGTACTGTGGTATAGAGAATCCCATAAAAACAGAATCCTAGATGACATTAAGTTTGTAAGCTGTTTATATAGCAACATTGAAGGAAACTGATGCCTGTAAAACCTGTGTTGTAGGGGAAAATATCAAATTAAAAGGGTGAACTAATCAAACTTTAAAAAAAAAAAAAATGACAAAAGCCAGATTCTTGGGTTGATCATGCATACCGACACAGGCAAAGAGAAGGCAATATGGTTGAGCTGATTGCTATATAAACTGAGCTCACGATAGCAATGGTTGAGAGATCCGTAAATTGACCCAACAAGAGTGCTTTGCTGGTTAAGTAGTTGAACATCCTTTTTTATATATATACAATAGGATAGGAAACAAATCAATAGTAGACCAAACAGACATAGATCACAGGGTTGTAGCTGATTGCAAATGATAGACTGAGTTCACGATAGCAATGGTTGAGAGATCCATAAATTGATCCAACAAGAGTGTTTTGCTGGTTAAGTAGTTGAACATGCTAATGAGACGAGAACACATCCTTTTCTATATATACAAATAGGATAGGAAACAAATCAATGGTAGACCAAACAGACCGCAACCAATTTAGGATTTGAGTGCACTAGAAAAGACAAAAGGCTTCGTCTGATCAAATACCTTAAGGGTCAATAAAGTCCTTAAGAGTGCATTCCCAAATGGCTGATTTTGTTTGCTAGAATCTGATGTGCAACCTATGTTCTGTTTCCTTTACCTGAATGTACGTTTAATATGTATTTAATTTGGTGACATCTGACAGTGTTTCTCATGGAGGGACCGCGTTGGAGGTGCCTCTGTGCATCCAAGGTATTGATTTAGTAGATGTAGCTTGCCTGTGTGAGTAGGTTAAACTATTATGATTGTGGTTGCTTGCAGTAGTGCACATATATCTCTATTTTACATAACTTTTGTTCTGTGTGTTATTAGGTTCTAACTGTGTAATTTATTGATCAGGATTTTTTGAAAATTTCCTATGATTTTCATATGGTAAAGTTGTTTTTAACATATTTGTTTTTACATTTAGCACAACAAGCTGCCCAGCATTTTTCAAATTCCTTCATGGATATGCTGTAATATGGAAGGAAATGATGGTGATGGATGCAAAGACAGTTATAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAAGCAATTTGCCGGAAAGTGAGGAAACCTTTTCTCATGGTGAGGCACCTTTCCATATTTGCCCCCCTCCTTTTTTTGTGTACGCTCTTCCCTTCTGAATTGTGGATGATTAAATTCATGTGTTTAAATTGGAGTTTCACTTTTCTATGCATTCTTTTGCAGGACCTGATACCATCTCTTCAAGCGTATTAACAAACTCCTCATCTAACAGTAGATGTTTTGCAGCCTGGAAGTCATCAGGTAAACGGTGGAAGCGGCGACACAGTAAACAGCATAAAACTCGTCAAGAGCAGAAAGCTCGTCAAGAGCGGTTGAATAACAGCAGGAAGTGGAAAGGTGTAGATCATGACCAGTTGTTAAGCAAGAAGATCCACAGAATTTCTGAACCAGAAAATCTGGATACTCTTGTCTCTGAAAACTGCACAGAAACTGTCTCAGACAATGGAAGCCTGGATGACAATCATAAAAAAATATTCTCGGAAGAAGCAGCTCAAAACAATTTAATTGATAATATCGACAATGATGAGGTAATCATTGAAAAACAATTTTCTCAAGAAGATTGCTGCACTGCAGAAAGTAAAGACGAACGAGATGCATCCTCATGCTCCTTAGACAATGGGCAAAGTGAACAGGATGGATCATCTTGTTCAGATTTTTCGAAGTGTAGTTTTAAAACAAAGAGGCATTCAGATCGGGATCTTGATAATCCTAAACCCTGCAAGTCTAGAAAACCGATTGGTGATGGCTCATTATTGTCTTCCAAGTACAGTAAAATTTCATTTTGTGGCATTGAGGACCATCTATCAGATGGCTTTTATGATGCGGGGCGTGATCGTCCGTTTATGCCTCTTGAGAATTACGAGCAAAATCAGTGTCTTGCTTCTCGTGAAGTCATCCTGTTAGACAGGTATGTTATTCCTACTACTACTAGTATATATATATATTTGTGATTCTTTTTGAGGGTACAAGTAAATTAGTAATAGTAATAGTAGTAGTCATAGTAATATATATTGGTATCTTTTTTGCGATTCATTTTTATATAATATGATTGGATTGGATTATTTTGTTGTGTTTCAGACAAAGGGATGAAGAATTGGATGCCATTCTGCTATCTGCTCAGGGACTGGTCTCTAATTTGAAGCAGTTAAATGGTTTAAACAAACCTGGGAGCCAGGATGAAGTTGATAACTTGCAGACAGCATCACTGCTTGCACTCTTTGTATCTGATCATTTTGGCGGAAGTGATAGAGGTGCTATTATAGAAAGGGCACGCAAATCTGTTTCTGGCTCAAACTATAGTAAGCCTTTTGTCTGTACATGTTCGACCGGAAGCAGCACGAGTATAAATGCTGCAACTGAACCAGTTGTTAATGCCATAGAAGATATCAATCTTTCTATGGTCTCTGAAAAATCTCTTGATTCTATTAAAAAAAGGCGAAATTCAATCATTGTTCCAATTGGCTCTGTTCAGTACGGGGTCTGTAGGCACAGAGCTCTTCTTTTTAAGGTGAGCAGTGTTGTTATATTCATCATATAATTTTGTTTATATACATATTTTAGTGTAACTTTTTCTTTTTTGCCTCTTATTGCAAGGATCTAATCCAAGTTATTTTGTTTACAGTATTTATGTGATCACATGGAGCCACCTGTACCTTGCGAGCTAGTTAGGGGTTACCTGGATTTTTCACCACATGCCTGGAATATCATTTTAATAAAGAGGAGTGATACATGGGTTCGAATGCTTGTTGATGCTTGCCGACCGTATGATATTAGAGAAGAGAAAGACACCGAATATTTCTGCAGGTATTTACTGCCGCTTAGTAAAAATGGATGTGCTAGTCCTTTTCTTATTATAAATAAGCAGCTTGGCTTGCTACATTCTATAACATTTCTATCATTTGAATTGGTTATATTATATAATATTGCTTTCATATTTAATATTGATTTTATATGTTGATGTGTTGAAATATATATTTCGTTATTAGTTCTGTTTCCCTTATTATTAATCAACAATCATTTGGTGGTTTAGCACTTGGATTCGGTTTTGAATATTGGATCTGATATCATATTGTAGCATACAAAGAATATTGCTTAATTATTGGATACTGATTTTGTAGTTGATGAAGTTCACTTTAATTATGCTCGATTTCTTGTTCAAATATAGATTGTTATTAGTTTTGCTCCTATTATTTATAAGTAATCAAAATTCGTTTAGAAATTTAGAACCCGGGTTTGTTTTTGAATATTGGATCTCATCTCATATTGTACCATGTAAAGAATATTGCTTATGCTAAACCAATAACGGCAAATCTGGCTCCAATTAGTCAAAAAGTATTTTGAAATCTAACCTCATTTAAAGTTAGAAAGATATTAGTGACTCTAAATACTGTGTTGTTGTCTCCAAACTGTCAGTGCATCTAAGGTGTTCAAAAGAATTCTTGGTGTTAAGTTAAATTTCGTCTGTAACACTAATGCTTTGTTTGGACGGAGAGGAAAAATGAGATGATAGAAAAAATGGTTTGAAAGAAAGTGTTTAGAAGAAAATGGAATTGAAGAACGGATGAATTTATATATTTCATTGGATGAACAGAAAATTGAAAGAAAGAAAGAAGTGTGATAGATTCCCTTCTCTTGTTTGACTAGATGGAATGAGAGGAAAGAAAATGAGTCCATGGCCATGCTATGAATGTGTGGATGAATATATTTTCATTTCATCACAAAATTCCTTCCTAGTTTTCTTTCTTGCAATGGAGATGATGTTTTATCTGGGTCTGACAGTTTTCCCACCCTTTTCTCTATTTTCCCTCTTAAACTAAATGAGTAAAAATGATATTTTTCGTTTATATCTCCTGTTTTCTTTTAATTTTTATCTGAAACAAACATTGCAAGAGATTTTTTTTGCTGCCCGGAAAGCATTTTAAACTCTTCTATTTTTGTAGTATTATATGGGATTATTCAGGGTCTGATGACTTGGTATTTCCAGGTACATTCCTCTTCGTCGAACCCAAATTCCTCTTTCAACTAGCATTCTTCCCAGTCCTGATAATTCCTTTCCATCTCTCTCTAATTGTGATGAACTTGAGAAAAAAGCTTTAACTACATTAGTTCGGTGCAAATATGGATCAGTTGAGGCTGCTGTGAAGGTATTTAATTATCCATGAATGATAGTAACATGGTTCCCTTAATGTTTTATTTTATTTTAATTGTTATTCCGGATCTTCTGATTTTTTGGATATCATGCAATTTAATGCAATTTTATACAATATCTTTTATGGTGTTGTAGGTGCGTACTTTGGAAGTACAGGAAAATTCAGCAGACAAAATAAAAAACTTCGAATATAATTCTTTGGGAGAAATCAGAATTCTTGGTGCTTTTAAACACCCCTGTATAGTGGAAATATATGGACACCAAATATCATGCATATGGACTATCTCAGCTGATGGTAATCCGAAGCATCGAGTGTTGAGATCTGCAATTTTTATGGAATATGTGAAAGGGGGCTCCTTAAAAGTAAGATTTTCTATATCATTTCTATGTTATTGCTAAGGTATTTTTGGTTGTTTTATTAAATCAACACCTCATTTTCTTATAGACCTATCTAGAGAAGTTGTCAGAAGCTGGTGAAAAGCATGTTCCTGTGGAGTTAGCGTTGTATATTGCCAAAGATGTCTCATGCGCTTTGTTGGAGCTGCATTCAAAGCACATAATTCACCGTGACATAAAAAGTGAAAACATTCTGTTCGATTGTGATAGGAAGAGAGATGATGGAACTCCCACTGTGAAGCTCTGTGATTTTGATAGTGCAGTGCCACTAAGATCACCTCTACATGCATGCTGTATTGCTCATGTAGGAACACCTCCTCCTTCTTTGTGCGTGGGAACACCTCGGTGGATGGCTCCAGAGGTCATGCGAACTATGTACAAGAAAAACACTTATGGATTGGTAAGATCCTTCAACTTATCAGCCATTTATTTGATCATTTTGGAAGGTTTACATGAATTCTTCCAATTTAATCTATGTTGTTATAATATTGTTAAAATAAAAAATATATTAATCATAAACATTAATTTACCAGTCTTTAAAAAAACACTTCCAATTTTTTTGAAAGATTTCTCCATTTTCCCTTTTATTTCCCACCCCCCAAAGCCCTCCCTTCCCCTCCCCTTCAAACTCCCAAACAAAGCCTTAGGGTTTATAGATAAAATGCCTATTCCAGTTTCTTATTCTGTAGATAATATTCTATAATCTTTGGTTCCTCTTTTATTCTTGTATTCCCAATTGCATAATTTCGAGTGTGTTTTTGAACACTAAATTGGATGGGTTGGGCAGGTCATATTGCACGTAAATAATATGGAAGAGATTTCAAATCACTTTTGGTGAAGAGCTAAAGTAATAAAAATAATTTTAGAATTTTTCATCTTGGTTTCAATAAAAACAATTATTGGCGTGTTTACAAAACTGTGATCTTTATTGTGCTCCTTGTCATTTTGTCATATATACCTAACCAATATAAATTTCCTGTTCCTTTTTTTTTTTTTTTTGGGTTAGAAGCATAAGTGCTCATGTTGCTTATTGCCATTGATTTTATTATGTCTAGAAAAGGAGTAATTTGATCTGTCTCTTGTTCTTGTCCTCAAATAAGCATAGCTGTATCGTGAAAATAATTCTTTTTGCCGTCACCAGACATAGTATTTATCTTTGATCTTAATTTACTTTATTTTGCAACAGGAAGCTGATATTTGGTCATTTGGATGTTTACTTCTGGAGATGCTAACTTTGCAAATTCCATATTTTGGAGTACCTGATTCACACGTCCATGATAGTCTGCAGGTATGGTTGTATTTTCTTCTAGATGGATGTTGTTTTTTGAACTCTACGGGCATACGCTCGTTCATTGCAACCCCTGTTTTACTTAATATTTCTTCTAATGATTGATACAGATGGGTAAACGACCACAACTAACTGATGAGCTAGAGGCATTGAGCTCAATGAATGAACCCACAATGATTCAATCTGGTGAAGAGCTGGAAAAATCAGATGCTGAGGCAGATACATTGAAGTTCCTTGTTGATTTGTTTCATAGGTGCGTGGAAGAAAATCCAAATGAACGACCTACAGCTGAAGAAATCCATGAAATGCTGCTTGGACACACAAGTCGCATACAAGTTCAAAATGTTAGTGAGATTTAG
Protein sequence

>MS.gene003828.t1

MKTLPSEISSLKALISMKVANNKLVELPPALTSLSRLESLDLSNNRLTSLGSLELSSMHRLQNLSLQHNKLPSIFQIPSWICCNMEGNDGDGCKDSYSSSSVEMDVYESNLPESEETFSHGPDTISSSVLTNSSSNSRCFAAWKSSGKRWKRRHSKQHKTRQEQKARQERLNNSRKWKGVDHDQLLSKKIHRISEPENLDTLVSENCTETVSDNGSLDDNHKKIFSEEAAQNNLIDNIDNDEVIIEKQFSQEDCCTAESKDERDASSCSLDNGQSEQDGSSCSDFSKCSFKTKRHSDRDLDNPKPCKSRKPIGDGSLLSSKYSKISFCGIEDHLSDGFYDAGRDRPFMPLENYEQNQCLASREVILLDRQRDEELDAILLSAQGLVSNLKQLNGLNKPGSQDEVDNLQTASLLALFVSDHFGGSDRGAIIERARKSVSGSNYSKPFVCTCSTGSSTSINAATEPVVNAIEDINLSMVSEKSLDSIKKRRNSIIVPIGSVQYGVCRHRALLFKYLCDHMEPPVPCELVRGYLDFSPHAWNIILIKRSDTWVRMLVDACRPYDIREEKDTEYFCRYIPLRRTQIPLSTSILPSPDNSFPSLSNCDELEKKALTTLVRCKYGSVEAAVKVRTLEVQENSADKIKNFEYNSLGEIRILGAFKHPCIVEIYGHQISCIWTISADGNPKHRVLRSAIFMEYVKGGSLKTYLEKLSEAGEKHVPVELALYIAKDVSCALLELHSKHIIHRDIKSENILFDCDRKRDDGTPTVKLCDFDSAVPLRSPLHACCIAHVGTPPPSLCVGTPRWMAPEVMRTMYKKNTYGLEADIWSFGCLLLEMLTLQIPYFGVPDSHVHDSLQMGKRPQLTDELEALSSMNEPTMIQSGEELEKSDAEADTLKFLVDLFHRCVEENPNERPTAEEIHEMLLGHTSRIQVQNVSEI