Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003907.t1 | XP_013456276.1 | 76.2 | 298 | 46 | 3 | 1 | 298 | 23 | 295 | 8.10E-111 | 410.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003907.t1 | Q1PF16 | 41.0 | 156 | 86 | 2 | 149 | 298 | 118 | 273 | 1.4e-23 | 111.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003907.t1 | A0A072UKT5 | 76.2 | 298 | 46 | 3 | 1 | 298 | 23 | 295 | 5.8e-111 | 410.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene003907.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003907.t1 | MTR_4g067010 | 84.899 | 298 | 20 | 3 | 1 | 298 | 23 | 295 | 0.0 | 507 |
MS.gene003907.t1 | MTR_4g066460 | 83.946 | 299 | 29 | 3 | 1 | 298 | 23 | 303 | 2.82e-174 | 485 |
MS.gene003907.t1 | MTR_4g066380 | 88.255 | 298 | 16 | 3 | 1 | 298 | 22 | 300 | 1.40e-172 | 481 |
MS.gene003907.t1 | MTR_6g047570 | 65.909 | 308 | 76 | 8 | 1 | 298 | 22 | 310 | 2.73e-130 | 374 |
MS.gene003907.t1 | MTR_0011s0260 | 62.805 | 328 | 77 | 7 | 1 | 298 | 22 | 334 | 3.99e-120 | 349 |
MS.gene003907.t1 | MTR_0011s0210 | 62.500 | 328 | 78 | 7 | 1 | 298 | 22 | 334 | 5.12e-118 | 343 |
MS.gene003907.t1 | MTR_0250s0040 | 57.475 | 301 | 62 | 7 | 2 | 298 | 1 | 239 | 7.45e-104 | 304 |
MS.gene003907.t1 | MTR_0246s0020 | 52.941 | 340 | 109 | 7 | 1 | 298 | 23 | 353 | 1.82e-92 | 279 |
MS.gene003907.t1 | MTR_0246s0020 | 52.941 | 340 | 109 | 7 | 1 | 298 | 23 | 353 | 2.91e-92 | 278 |
MS.gene003907.t1 | MTR_0246s0050 | 46.584 | 322 | 120 | 10 | 1 | 298 | 2 | 295 | 1.54e-73 | 229 |
MS.gene003907.t1 | MTR_4g098035 | 46.584 | 322 | 120 | 10 | 1 | 298 | 23 | 316 | 2.50e-73 | 229 |
MS.gene003907.t1 | MTR_6g047550 | 56.652 | 233 | 63 | 6 | 1 | 213 | 22 | 236 | 2.39e-71 | 221 |
MS.gene003907.t1 | MTR_5g014520 | 46.392 | 291 | 113 | 11 | 24 | 298 | 45 | 308 | 2.05e-56 | 185 |
MS.gene003907.t1 | MTR_5g014560 | 47.343 | 207 | 88 | 6 | 100 | 298 | 89 | 282 | 3.87e-45 | 155 |
MS.gene003907.t1 | MTR_4g097920 | 38.272 | 243 | 125 | 6 | 76 | 298 | 52 | 289 | 2.81e-40 | 142 |
MS.gene003907.t1 | MTR_4g097940 | 38.683 | 243 | 124 | 6 | 76 | 298 | 67 | 304 | 2.82e-40 | 143 |
MS.gene003907.t1 | MTR_4g097920 | 38.272 | 243 | 125 | 6 | 76 | 298 | 67 | 304 | 4.00e-40 | 142 |
MS.gene003907.t1 | MTR_2g104490 | 39.556 | 225 | 123 | 6 | 79 | 298 | 70 | 286 | 2.31e-37 | 135 |
MS.gene003907.t1 | MTR_2g104490 | 39.556 | 225 | 123 | 6 | 79 | 298 | 70 | 286 | 3.22e-37 | 134 |
MS.gene003907.t1 | MTR_5g014600 | 41.117 | 197 | 93 | 3 | 124 | 298 | 118 | 313 | 3.52e-37 | 135 |
MS.gene003907.t1 | MTR_2g010450 | 43.548 | 186 | 94 | 3 | 117 | 298 | 151 | 329 | 5.41e-37 | 135 |
MS.gene003907.t1 | MTR_2g104550 | 39.352 | 216 | 119 | 4 | 88 | 298 | 82 | 290 | 6.21e-37 | 134 |
MS.gene003907.t1 | MTR_8g009020 | 39.462 | 223 | 113 | 5 | 88 | 298 | 89 | 301 | 1.71e-36 | 133 |
MS.gene003907.t1 | MTR_5g014640 | 36.585 | 246 | 133 | 4 | 66 | 298 | 67 | 302 | 3.21e-36 | 132 |
MS.gene003907.t1 | MTR_4g097950 | 49.080 | 163 | 71 | 4 | 147 | 298 | 67 | 228 | 1.18e-35 | 129 |
MS.gene003907.t1 | MTR_4g092700 | 41.304 | 184 | 93 | 3 | 124 | 298 | 132 | 309 | 4.82e-35 | 129 |
MS.gene003907.t1 | MTR_4g009540 | 42.941 | 170 | 82 | 5 | 142 | 298 | 142 | 309 | 8.34e-35 | 128 |
MS.gene003907.t1 | MTR_8g069740 | 41.954 | 174 | 92 | 4 | 133 | 298 | 93 | 265 | 1.66e-34 | 126 |
MS.gene003907.t1 | MTR_4g009540 | 42.941 | 170 | 82 | 5 | 142 | 298 | 142 | 309 | 2.00e-34 | 127 |
MS.gene003907.t1 | MTR_4g009110 | 39.785 | 186 | 102 | 3 | 121 | 298 | 145 | 328 | 2.27e-34 | 128 |
MS.gene003907.t1 | MTR_7g080780 | 38.421 | 190 | 108 | 3 | 109 | 298 | 114 | 294 | 1.02e-30 | 117 |
MS.gene003907.t1 | MTR_7g080780 | 38.421 | 190 | 108 | 3 | 109 | 298 | 127 | 307 | 1.36e-30 | 117 |
MS.gene003907.t1 | MTR_2g104650 | 44.048 | 168 | 85 | 4 | 139 | 298 | 81 | 247 | 4.91e-29 | 112 |
MS.gene003907.t1 | MTR_2g104560 | 39.766 | 171 | 84 | 6 | 139 | 298 | 41 | 203 | 5.32e-29 | 110 |
MS.gene003907.t1 | MTR_8g009010 | 36.449 | 214 | 93 | 4 | 88 | 298 | 77 | 250 | 5.07e-28 | 110 |
MS.gene003907.t1 | MTR_2g104530 | 33.871 | 186 | 108 | 4 | 117 | 298 | 78 | 252 | 2.44e-23 | 97.1 |
MS.gene003907.t1 | MTR_5g014550 | 47.619 | 126 | 55 | 3 | 180 | 298 | 54 | 175 | 2.53e-23 | 95.1 |
MS.gene003907.t1 | MTR_2g104590 | 36.747 | 166 | 78 | 5 | 139 | 298 | 58 | 202 | 1.13e-21 | 91.7 |
MS.gene003907.t1 | MTR_2g104500 | 30.417 | 240 | 128 | 8 | 78 | 298 | 31 | 250 | 1.70e-21 | 92.0 |
MS.gene003907.t1 | MTR_8g024790 | 31.481 | 162 | 103 | 3 | 122 | 276 | 263 | 423 | 1.56e-17 | 82.8 |
MS.gene003907.t1 | MTR_8g067280 | 31.138 | 167 | 91 | 2 | 141 | 283 | 443 | 609 | 4.17e-17 | 82.0 |
MS.gene003907.t1 | MTR_1g072320 | 31.250 | 144 | 84 | 2 | 150 | 280 | 470 | 611 | 5.19e-17 | 81.6 |
MS.gene003907.t1 | MTR_5g030430 | 31.138 | 167 | 97 | 3 | 135 | 283 | 474 | 640 | 1.45e-15 | 77.4 |
MS.gene003907.t1 | MTR_4g009510 | 34.000 | 150 | 85 | 5 | 152 | 298 | 45 | 183 | 2.19e-15 | 73.9 |
MS.gene003907.t1 | MTR_3g030700 | 28.191 | 188 | 127 | 2 | 119 | 298 | 165 | 352 | 5.34e-15 | 75.1 |
MS.gene003907.t1 | MTR_7g451650 | 33.835 | 133 | 67 | 2 | 173 | 298 | 57 | 175 | 5.80e-15 | 72.4 |
MS.gene003907.t1 | MTR_7g451650 | 33.835 | 133 | 67 | 2 | 173 | 298 | 57 | 175 | 6.03e-15 | 72.4 |
MS.gene003907.t1 | MTR_8g064700 | 26.596 | 188 | 118 | 5 | 121 | 296 | 219 | 398 | 1.65e-14 | 73.6 |
MS.gene003907.t1 | MTR_8g024770 | 30.263 | 152 | 72 | 5 | 134 | 256 | 246 | 392 | 2.24e-14 | 73.6 |
MS.gene003907.t1 | MTR_4g009420 | 32.667 | 150 | 69 | 4 | 157 | 298 | 50 | 175 | 6.91e-14 | 69.3 |
MS.gene003907.t1 | MTR_7g117670 | 30.323 | 155 | 99 | 2 | 146 | 296 | 394 | 543 | 1.09e-13 | 71.6 |
MS.gene003907.t1 | MTR_4g009420 | 34.328 | 134 | 57 | 3 | 173 | 298 | 65 | 175 | 1.50e-13 | 68.6 |
MS.gene003907.t1 | MTR_7g096350 | 42.529 | 87 | 46 | 1 | 135 | 217 | 336 | 422 | 2.79e-13 | 70.1 |
MS.gene003907.t1 | MTR_3g498695 | 27.485 | 171 | 111 | 2 | 136 | 293 | 284 | 454 | 5.58e-13 | 69.3 |
MS.gene003907.t1 | MTR_3g498695 | 27.485 | 171 | 111 | 2 | 136 | 293 | 284 | 454 | 5.69e-13 | 69.3 |
MS.gene003907.t1 | MTR_8g027495 | 45.000 | 80 | 36 | 2 | 146 | 217 | 450 | 529 | 7.86e-13 | 68.9 |
MS.gene003907.t1 | MTR_7g050350 | 32.283 | 127 | 65 | 2 | 179 | 298 | 1 | 113 | 9.45e-13 | 64.7 |
MS.gene003907.t1 | MTR_7g451650 | 32.283 | 127 | 65 | 2 | 179 | 298 | 1 | 113 | 9.45e-13 | 64.7 |
MS.gene003907.t1 | MTR_3g104100 | 26.452 | 155 | 101 | 2 | 152 | 293 | 197 | 351 | 8.19e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003907.t1 | AT4G37850 | 47.853 | 163 | 75 | 5 | 143 | 298 | 145 | 304 | 2.94e-36 | 132 |
MS.gene003907.t1 | AT4G37850 | 47.853 | 163 | 75 | 5 | 143 | 298 | 145 | 304 | 2.94e-36 | 132 |
MS.gene003907.t1 | AT2G22760 | 40.361 | 166 | 93 | 2 | 139 | 298 | 108 | 273 | 2.69e-33 | 124 |
MS.gene003907.t1 | AT2G22760 | 40.361 | 166 | 93 | 2 | 139 | 298 | 108 | 273 | 5.04e-33 | 123 |
MS.gene003907.t1 | AT2G22750 | 45.349 | 172 | 84 | 4 | 136 | 298 | 111 | 281 | 3.95e-31 | 118 |
MS.gene003907.t1 | AT2G22750 | 45.349 | 172 | 84 | 4 | 136 | 298 | 139 | 309 | 4.17e-31 | 119 |
MS.gene003907.t1 | AT2G22750 | 45.349 | 172 | 84 | 4 | 136 | 298 | 111 | 281 | 4.57e-31 | 118 |
MS.gene003907.t1 | AT2G22750 | 45.349 | 172 | 84 | 4 | 136 | 298 | 139 | 309 | 4.75e-31 | 119 |
MS.gene003907.t1 | AT2G22750 | 45.349 | 172 | 84 | 4 | 136 | 298 | 135 | 305 | 4.95e-31 | 119 |
MS.gene003907.t1 | AT2G22770 | 37.500 | 168 | 87 | 1 | 149 | 298 | 131 | 298 | 1.26e-27 | 109 |
MS.gene003907.t1 | AT4G17880 | 32.558 | 215 | 109 | 5 | 93 | 283 | 350 | 552 | 2.08e-20 | 91.7 |
MS.gene003907.t1 | AT5G46760 | 35.542 | 166 | 85 | 6 | 135 | 280 | 396 | 559 | 1.41e-19 | 89.4 |
MS.gene003907.t1 | AT1G32640 | 32.099 | 162 | 94 | 4 | 134 | 283 | 432 | 589 | 2.50e-17 | 82.4 |
MS.gene003907.t1 | AT1G01260 | 29.775 | 178 | 111 | 3 | 74 | 241 | 351 | 524 | 8.20e-15 | 75.1 |
MS.gene003907.t1 | AT1G01260 | 29.775 | 178 | 111 | 3 | 74 | 241 | 351 | 524 | 8.20e-15 | 75.1 |
MS.gene003907.t1 | AT1G01260 | 29.775 | 178 | 111 | 3 | 74 | 241 | 351 | 524 | 8.20e-15 | 75.1 |
MS.gene003907.t1 | AT2G46510 | 47.297 | 74 | 29 | 1 | 142 | 205 | 377 | 450 | 1.26e-14 | 74.3 |
MS.gene003907.t1 | AT4G16430 | 39.216 | 102 | 58 | 1 | 135 | 232 | 301 | 402 | 2.90e-14 | 73.2 |
MS.gene003907.t1 | AT4G09820 | 30.769 | 130 | 73 | 1 | 139 | 268 | 352 | 464 | 3.17e-13 | 70.1 |
MS.gene003907.t1 | AT5G46830 | 41.667 | 96 | 42 | 2 | 146 | 227 | 335 | 430 | 8.28e-13 | 68.9 |
MS.gene003907.t1 | AT4G00870 | 34.188 | 117 | 65 | 2 | 151 | 258 | 250 | 363 | 1.30e-12 | 68.2 |
MS.gene003907.t1 | AT5G41315 | 29.310 | 174 | 92 | 6 | 150 | 295 | 441 | 611 | 1.17e-11 | 65.5 |
MS.gene003907.t1 | AT5G41315 | 29.310 | 174 | 92 | 6 | 150 | 295 | 446 | 616 | 1.26e-11 | 65.5 |
MS.gene003907.t1 | AT5G41315 | 29.310 | 174 | 92 | 6 | 150 | 295 | 449 | 619 | 1.34e-11 | 65.5 |
MS.gene003907.t1 | AT1G63650 | 27.811 | 169 | 96 | 6 | 150 | 295 | 405 | 570 | 5.66e-11 | 63.5 |
MS.gene003907.t1 | AT1G63650 | 27.811 | 169 | 96 | 6 | 150 | 295 | 405 | 570 | 5.66e-11 | 63.5 |
MS.gene003907.t1 | AT1G63650 | 27.811 | 169 | 96 | 6 | 150 | 295 | 405 | 570 | 5.66e-11 | 63.5 |
Find 43 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGTGGAAGCAAGAGTATT+AGG | 0.274085 | 4.4:+39785180 | MS.gene003907:CDS |
TCTTGTTCCTAACCTTAAAA+AGG | 0.274757 | 4.4:+39781761 | MS.gene003907:CDS |
TCAAGAGCACAAGGGGCTTT+TGG | 0.303932 | 4.4:+39785230 | MS.gene003907:CDS |
CATCAGCATCAAGGAAATTC+AGG | 0.324134 | 4.4:-39781287 | None:intergenic |
GATGGTGATGGAGAAATATT+TGG | 0.350142 | 4.4:-39781465 | None:intergenic |
CTGCAAGAGCAATGAAGGTT+TGG | 0.363766 | 4.4:-39781737 | None:intergenic |
ATCAGTGTCTCCAACCGAAT+TGG | 0.364748 | 4.4:+39781572 | MS.gene003907:CDS |
GATAGTGTTGAATGTGTTGT+TGG | 0.376948 | 4.4:+39785147 | MS.gene003907:CDS |
ACTCTTGCTTCCACTTGAAA+TGG | 0.401306 | 4.4:-39785174 | None:intergenic |
ATCGCTGCATAGGCATGGTT+TGG | 0.409003 | 4.4:-39785103 | None:intergenic |
AATAGCAGTGTCTTACCCTT+TGG | 0.414898 | 4.4:+39785297 | MS.gene003907:CDS |
TAGGAAAACAAATGTTGATT+CGG | 0.415655 | 4.4:+39785199 | MS.gene003907:CDS |
TGCAAGAGCAATGAAGGTTT+GGG | 0.438568 | 4.4:-39781736 | None:intergenic |
CACTCAACAGAAACCTCAAA+AGG | 0.444007 | 4.4:+39781606 | MS.gene003907:CDS |
CAAACAACAATGTTTAACTC+TGG | 0.449913 | 4.4:+39781359 | MS.gene003907:CDS |
AAAGAGGAGTTAGATGGTGA+TGG | 0.464747 | 4.4:-39781477 | None:intergenic |
AAACAACAATGTTTAACTCT+GGG | 0.467228 | 4.4:+39781360 | MS.gene003907:CDS |
TGACTTGCTGAGATTATTTG+TGG | 0.472239 | 4.4:-39781391 | None:intergenic |
GCTGAGATTATTTGTGGAAG+TGG | 0.485912 | 4.4:-39781385 | None:intergenic |
AAGAGCTGCAAGAGCAATGA+AGG | 0.494766 | 4.4:-39781742 | None:intergenic |
AACTGAAAAGAGGAGTTAGA+TGG | 0.496291 | 4.4:-39781483 | None:intergenic |
AATTTCCTTGATGCTGATGT+AGG | 0.503309 | 4.4:+39781291 | MS.gene003907:CDS |
GGTAACTACCTGAGCAATGA+TGG | 0.506977 | 4.4:-39785340 | None:intergenic |
AGCAAAAGGCCTCGTGCTCA+TGG | 0.511731 | 4.4:+39781669 | MS.gene003907:CDS |
TTCCTTGATGCTGATGTAGG+AGG | 0.513457 | 4.4:+39781294 | MS.gene003907:CDS |
TGACATTACCATCATTGCTC+AGG | 0.520672 | 4.4:+39785332 | MS.gene003907:CDS |
AGAAACCTCAAAAGGGTCGT+TGG | 0.545529 | 4.4:+39781614 | MS.gene003907:CDS |
TCCTTGATGCTGATGTAGGA+GGG | 0.555978 | 4.4:+39781295 | MS.gene003907:CDS |
GTCAAGTGTAGAATCTCCAA+AGG | 0.576619 | 4.4:-39785313 | None:intergenic |
TCTTCATCGCTGCATAGGCA+TGG | 0.581383 | 4.4:-39785108 | None:intergenic |
AAGAATCTTCATCGCTGCAT+AGG | 0.581886 | 4.4:-39785113 | None:intergenic |
ACCCTCCTACATCAGCATCA+AGG | 0.584158 | 4.4:-39781296 | None:intergenic |
TGGTATTTGAAACTGAAAAG+AGG | 0.585974 | 4.4:-39781493 | None:intergenic |
ACTCAACAGAAACCTCAAAA+GGG | 0.587077 | 4.4:+39781607 | MS.gene003907:CDS |
TACAATGTCAAGAGCACAAG+GGG | 0.594830 | 4.4:+39785223 | MS.gene003907:CDS |
TGTTGGTTCACCATTTCAAG+TGG | 0.611743 | 4.4:+39785164 | MS.gene003907:CDS |
GATACAATGTCAAGAGCACA+AGG | 0.611765 | 4.4:+39785221 | MS.gene003907:CDS |
TCAAGTGTAGAATCTCCAAA+GGG | 0.613125 | 4.4:-39785312 | None:intergenic |
CGAATACAATATATTTGCTG+AGG | 0.615306 | 4.4:+39781257 | MS.gene003907:CDS |
AACAACAATGTTTAACTCTG+GGG | 0.649069 | 4.4:+39781361 | MS.gene003907:CDS |
TCATGGTAGAGATCACATCA+TGG | 0.685356 | 4.4:+39781686 | MS.gene003907:CDS |
TGATCTCTACCATGAGCACG+AGG | 0.691122 | 4.4:-39781678 | None:intergenic |
ATACAATGTCAAGAGCACAA+GGG | 0.744485 | 4.4:+39785222 | MS.gene003907:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATAATTAAGGAATTAA+TGG | + | chr4.4:39784094-39784113 | MS.gene003907:intron | 10.0% |
!! | AAAAATGATTGTTAATTTAT+TGG | + | chr4.4:39784135-39784154 | MS.gene003907:intron | 10.0% |
!! | AAAATAATTAAGGAATTAAT+GGG | + | chr4.4:39784095-39784114 | MS.gene003907:intron | 10.0% |
!! | AAAATTGATTGTTAATTTAT+TGG | + | chr4.4:39784171-39784190 | MS.gene003907:intron | 10.0% |
!! | ACAAATTAGTAATATTAATT+GGG | + | chr4.4:39783217-39783236 | MS.gene003907:intron | 10.0% |
!! | TATTTGTTTATAAATGTAAT+CGG | - | chr4.4:39783400-39783419 | None:intergenic | 10.0% |
!!! | TTTTTTTAAAATTTCGTTTT+AGG | - | chr4.4:39784350-39784369 | None:intergenic | 10.0% |
!! | AAATTAGTAATATTAATTGG+GGG | + | chr4.4:39783219-39783238 | MS.gene003907:intron | 15.0% |
!! | ATGAAAAAGGTAAAAAAAAT+AGG | + | chr4.4:39784064-39784083 | MS.gene003907:intron | 15.0% |
!! | ATTTGTTTATAAATGTAATC+GGG | - | chr4.4:39783399-39783418 | None:intergenic | 15.0% |
!! | CAAATTAGTAATATTAATTG+GGG | + | chr4.4:39783218-39783237 | MS.gene003907:intron | 15.0% |
!! | GACAAATTAGTAATATTAAT+TGG | + | chr4.4:39783216-39783235 | MS.gene003907:intron | 15.0% |
!! | TGTTGTTCTATAAAATAAAA+TGG | + | chr4.4:39782745-39782764 | MS.gene003907:intron | 15.0% |
!! | TTCTCTTAAATAAAATCAAA+GGG | - | chr4.4:39782404-39782423 | None:intergenic | 15.0% |
!! | TTTCTCTTAAATAAAATCAA+AGG | - | chr4.4:39782405-39782424 | None:intergenic | 15.0% |
!!! | AAATTGTAGAGTATTTTATT+TGG | - | chr4.4:39782944-39782963 | None:intergenic | 15.0% |
!!! | AATTGTAGAGTATTTTATTT+GGG | - | chr4.4:39782943-39782962 | None:intergenic | 15.0% |
!!! | AGTATTTTTATAATAATGAC+CGG | - | chr4.4:39782083-39782102 | None:intergenic | 15.0% |
!!! | ATTTTATGATCTCTAATAAT+TGG | - | chr4.4:39784571-39784590 | None:intergenic | 15.0% |
!!! | ATTTTTTTTTTTTTGACAAG+AGG | - | chr4.4:39782010-39782029 | None:intergenic | 15.0% |
!!! | TATTTTGACCAATATATAAA+GGG | - | chr4.4:39782041-39782060 | None:intergenic | 15.0% |
!!! | TCAATAAAATCACATTTTTA+AGG | - | chr4.4:39783653-39783672 | None:intergenic | 15.0% |
!!! | TTATTTTGACCATATATTAA+CGG | - | chr4.4:39783712-39783731 | None:intergenic | 15.0% |
!! | AAAAGGTAAAAAAAATAGGA+AGG | + | chr4.4:39784068-39784087 | MS.gene003907:intron | 20.0% |
!! | AAATGGAAAATGTTATCTTA+AGG | + | chr4.4:39782762-39782781 | MS.gene003907:intron | 20.0% |
!! | AAATTCTTGATAAAAAGCTT+CGG | + | chr4.4:39782710-39782729 | MS.gene003907:intron | 20.0% |
!! | AACAATTAGAATTATCATGA+GGG | + | chr4.4:39783583-39783602 | MS.gene003907:intron | 20.0% |
!! | AACATATTAATTCTCTTACT+TGG | - | chr4.4:39784263-39784282 | None:intergenic | 20.0% |
!! | AATGGAAAATGTTATCTTAA+GGG | + | chr4.4:39782763-39782782 | MS.gene003907:intron | 20.0% |
!! | ACATATTAATTCTCTTACTT+GGG | - | chr4.4:39784262-39784281 | None:intergenic | 20.0% |
!! | ACATTCTTATCTTTCTATAA+AGG | + | chr4.4:39782314-39782333 | MS.gene003907:intron | 20.0% |
!! | AGTAAGAGAATTAATATGTT+TGG | + | chr4.4:39784263-39784282 | MS.gene003907:intron | 20.0% |
!! | ATTCAATTAACCTAAAAAGT+TGG | - | chr4.4:39783423-39783442 | None:intergenic | 20.0% |
!! | GGACAAAAATAAAATCAAAT+GGG | + | chr4.4:39783301-39783320 | MS.gene003907:intron | 20.0% |
!! | TAACATTTCCCTTTATATAT+TGG | + | chr4.4:39782030-39782049 | MS.gene003907:intron | 20.0% |
!! | TACTCATATTTAATTAGTGT+CGG | - | chr4.4:39784418-39784437 | None:intergenic | 20.0% |
!! | TTAGAGATAAAGATAAATCT+TGG | + | chr4.4:39784917-39784936 | MS.gene003907:intron | 20.0% |
!! | TTTAATACACATACAAACAA+AGG | - | chr4.4:39783176-39783195 | None:intergenic | 20.0% |
!! | TTTGTTTATAAATGTAATCG+GGG | - | chr4.4:39783398-39783417 | None:intergenic | 20.0% |
!!! | AAAGTATACTACTACTTTTA+AGG | - | chr4.4:39782989-39783008 | None:intergenic | 20.0% |
!!! | CACTTTAGTTCAAAATAAAT+AGG | + | chr4.4:39783615-39783634 | MS.gene003907:intron | 20.0% |
!!! | CTATTTTGACCAATATATAA+AGG | - | chr4.4:39782042-39782061 | None:intergenic | 20.0% |
!!! | TAAACAAATACCAACTTTTT+AGG | + | chr4.4:39783410-39783429 | MS.gene003907:intron | 20.0% |
!!! | TAATTGATGATTTTAAGAGT+TGG | - | chr4.4:39781817-39781836 | None:intergenic | 20.0% |
!!! | TTAACTTTTCCGTTAATATA+TGG | + | chr4.4:39783700-39783719 | MS.gene003907:intron | 20.0% |
!!! | TTGATTTTGTTTATTTGCAA+CGG | + | chr4.4:39783669-39783688 | MS.gene003907:intron | 20.0% |
! | AAACAACAATGTTTAACTCT+GGG | + | chr4.4:39781360-39781379 | MS.gene003907:CDS | 25.0% |
! | AAGAAATGTGAAAAATGCAA+AGG | - | chr4.4:39783094-39783113 | None:intergenic | 25.0% |
! | AATAAGAAGTGAGAAAAACA+AGG | + | chr4.4:39782534-39782553 | MS.gene003907:intron | 25.0% |
! | AATTCTTGATAAAAAGCTTC+GGG | + | chr4.4:39782711-39782730 | MS.gene003907:intron | 25.0% |
! | ACAAGTTAAGGATCTATAAA+AGG | - | chr4.4:39782895-39782914 | None:intergenic | 25.0% |
! | AGAAATGTGAAAAATGCAAA+GGG | - | chr4.4:39783093-39783112 | None:intergenic | 25.0% |
! | AGTTATATAAATAGTGCACA+TGG | + | chr4.4:39783731-39783750 | MS.gene003907:intron | 25.0% |
! | ATGATTCAATCACAAATGTA+AGG | - | chr4.4:39784233-39784252 | None:intergenic | 25.0% |
! | ATGCATCTAGTAATTTGAAA+AGG | + | chr4.4:39783265-39783284 | MS.gene003907:intron | 25.0% |
! | CAAAAAAATGAAGCCTAATA+CGG | + | chr4.4:39784763-39784782 | MS.gene003907:intron | 25.0% |
! | CAAAAATAAAATCAAATGGG+TGG | + | chr4.4:39783304-39783323 | MS.gene003907:intron | 25.0% |
! | CAACAATTAGAATTATCATG+AGG | + | chr4.4:39783582-39783601 | MS.gene003907:intron | 25.0% |
! | CTCATGATAATTCTAATTGT+TGG | - | chr4.4:39783584-39783603 | None:intergenic | 25.0% |
! | GGAAGGAGAAAAAATAATTA+AGG | + | chr4.4:39784085-39784104 | MS.gene003907:intron | 25.0% |
! | GGGACAAAAATAAAATCAAA+TGG | + | chr4.4:39783300-39783319 | MS.gene003907:intron | 25.0% |
! | TAAAACAATGCTACATAGTA+GGG | - | chr4.4:39784847-39784866 | None:intergenic | 25.0% |
! | TGATTCAATCACAAATGTAA+GGG | - | chr4.4:39784232-39784251 | None:intergenic | 25.0% |
! | TGCATCTAGTAATTTGAAAA+GGG | + | chr4.4:39783266-39783285 | MS.gene003907:intron | 25.0% |
! | TTAATACAGCAACAAATTGT+AGG | + | chr4.4:39783552-39783571 | MS.gene003907:intron | 25.0% |
! | TTCTTATTGGTCAAAAACAA+TGG | - | chr4.4:39782522-39782541 | None:intergenic | 25.0% |
! | TTTAGGCCTAAAAATACATT+GGG | - | chr4.4:39784333-39784352 | None:intergenic | 25.0% |
!! | ACTGCTACTTCAAAAAAATA+TGG | + | chr4.4:39782623-39782642 | MS.gene003907:intron | 25.0% |
!! | CTGCTACTTCAAAAAAATAT+GGG | + | chr4.4:39782624-39782643 | MS.gene003907:intron | 25.0% |
!! | GTGATTCATATTTTCCAATT+CGG | - | chr4.4:39781589-39781608 | None:intergenic | 25.0% |
!! | TAATTAAGGAATTAATGGGT+TGG | + | chr4.4:39784099-39784118 | MS.gene003907:intron | 25.0% |
!! | TAGGAAAACAAATGTTGATT+CGG | + | chr4.4:39785199-39785218 | MS.gene003907:CDS | 25.0% |
!! | TTTTAGGCCTAAAAATACAT+TGG | - | chr4.4:39784334-39784353 | None:intergenic | 25.0% |
!! | TTTTTATAATAATGACCGGA+AGG | - | chr4.4:39782079-39782098 | None:intergenic | 25.0% |
!!! | AATCACATTTTTAAGGAATG+TGG | - | chr4.4:39783646-39783665 | None:intergenic | 25.0% |
!!! | GTTTTAATGAATACTTACTC+TGG | - | chr4.4:39783513-39783532 | None:intergenic | 25.0% |
!!! | TAAAGTATCGTACCTTTTTA+AGG | - | chr4.4:39781776-39781795 | None:intergenic | 25.0% |
!!! | TAAGCAAAAGACTACTTTTT+AGG | - | chr4.4:39782202-39782221 | None:intergenic | 25.0% |
!!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr4.4:39782535-39782554 | None:intergenic | 25.0% |
AAAACAATGGAGAGAGAAAA+AGG | - | chr4.4:39782509-39782528 | None:intergenic | 30.0% | |
AAATGTGAAAAATGCAAAGG+GGG | - | chr4.4:39783091-39783110 | None:intergenic | 30.0% | |
AACAACAATGTTTAACTCTG+GGG | + | chr4.4:39781361-39781380 | MS.gene003907:CDS | 30.0% | |
ATCTGTAAAAATCTGCTAGA+TGG | + | chr4.4:39784975-39784994 | MS.gene003907:intron | 30.0% | |
ATGAAATTTCCAGAATGTGT+TGG | + | chr4.4:39782367-39782386 | MS.gene003907:intron | 30.0% | |
CAAAAACCTCAAAAAGCAAA+AGG | + | chr4.4:39781655-39781674 | MS.gene003907:CDS | 30.0% | |
CAAACAACAATGTTTAACTC+TGG | + | chr4.4:39781359-39781378 | MS.gene003907:CDS | 30.0% | |
CATACAAACAAAGGACAATT+TGG | - | chr4.4:39783167-39783186 | None:intergenic | 30.0% | |
CATCTAGTAATTTGAAAAGG+GGG | + | chr4.4:39783268-39783287 | MS.gene003907:intron | 30.0% | |
CTTTCTATAAAGGAAAATGC+TGG | + | chr4.4:39782324-39782343 | MS.gene003907:intron | 30.0% | |
GAAAGAGCTTAAAAATCGTT+TGG | + | chr4.4:39785035-39785054 | MS.gene003907:CDS | 30.0% | |
GAAATGTGAAAAATGCAAAG+GGG | - | chr4.4:39783092-39783111 | None:intergenic | 30.0% | |
GCATCTAGTAATTTGAAAAG+GGG | + | chr4.4:39783267-39783286 | MS.gene003907:intron | 30.0% | |
GCTGTATTAATTACTACAAG+TGG | - | chr4.4:39783542-39783561 | None:intergenic | 30.0% | |
GGTTTAGAAAACAAATACTC+CGG | + | chr4.4:39784192-39784211 | MS.gene003907:intron | 30.0% | |
GTAAAACAATGCTACATAGT+AGG | - | chr4.4:39784848-39784867 | None:intergenic | 30.0% | |
TATAGAATCACTTTCGATTG+AGG | - | chr4.4:39784385-39784404 | None:intergenic | 30.0% | |
TATGAAATGAGTGATGTATG+TGG | - | chr4.4:39782177-39782196 | None:intergenic | 30.0% | |
TCAACAAAGTTGTCATCAAA+TGG | + | chr4.4:39782560-39782579 | MS.gene003907:intron | 30.0% | |
TCTTGTTCCTAACCTTAAAA+AGG | + | chr4.4:39781761-39781780 | MS.gene003907:CDS | 30.0% | |
! | AGTATTTAGTTCCAGTTGAT+AGG | - | chr4.4:39783047-39783066 | None:intergenic | 30.0% |
! | CGAATACAATATATTTGCTG+AGG | + | chr4.4:39781257-39781276 | MS.gene003907:CDS | 30.0% |
! | TATTAATTGGGGGTATGTTT+AGG | + | chr4.4:39783229-39783248 | MS.gene003907:intron | 30.0% |
! | TGGTATTTGAAACTGAAAAG+AGG | - | chr4.4:39781496-39781515 | None:intergenic | 30.0% |
! | TTCATATTTTCCAATTCGGT+TGG | - | chr4.4:39781585-39781604 | None:intergenic | 30.0% |
!! | AAGGGTTTTGATATATACTC+CGG | - | chr4.4:39784214-39784233 | None:intergenic | 30.0% |
!! | ATCCTTAACTTGTATCCTTA+GGG | + | chr4.4:39782902-39782921 | MS.gene003907:intron | 30.0% |
!! | ATTTTGTTTATTTGCAACGG+AGG | + | chr4.4:39783672-39783691 | MS.gene003907:intron | 30.0% |
!! | CTTCTTTTAAAGATGAGTAG+TGG | + | chr4.4:39784020-39784039 | MS.gene003907:intron | 30.0% |
!! | CTTTGACTTGTATTTATGAG+CGG | + | chr4.4:39783789-39783808 | MS.gene003907:intron | 30.0% |
!! | GATTTTAAGAGTTGGCTAAT+AGG | - | chr4.4:39781809-39781828 | None:intergenic | 30.0% |
!! | TTTTGTTTATTTGCAACGGA+GGG | + | chr4.4:39783673-39783692 | MS.gene003907:intron | 30.0% |
!!! | AACCACTTTTTGACAACTTT+TGG | + | chr4.4:39782437-39782456 | MS.gene003907:intron | 30.0% |
!!! | AATTTTTTAGGCTCCGTATT+AGG | - | chr4.4:39784779-39784798 | None:intergenic | 30.0% |
!!! | ATTCTCTTTTGAGTTACTAG+GGG | - | chr4.4:39781544-39781563 | None:intergenic | 30.0% |
!!! | CATTCTCTTTTGAGTTACTA+GGG | - | chr4.4:39781545-39781564 | None:intergenic | 30.0% |
!!! | TATCGTACCTTTTTAAGGTT+AGG | - | chr4.4:39781771-39781790 | None:intergenic | 30.0% |
!!! | TCATTCTCTTTTGAGTTACT+AGG | - | chr4.4:39781546-39781565 | None:intergenic | 30.0% |
AACTGAAAAGAGGAGTTAGA+TGG | - | chr4.4:39781486-39781505 | None:intergenic | 35.0% | |
AATGTGAAAAATGCAAAGGG+GGG | - | chr4.4:39783090-39783109 | None:intergenic | 35.0% | |
AATTTCCTTGATGCTGATGT+AGG | + | chr4.4:39781291-39781310 | MS.gene003907:CDS | 35.0% | |
ACTCAACAGAAACCTCAAAA+GGG | + | chr4.4:39781607-39781626 | MS.gene003907:CDS | 35.0% | |
AGTGCAAGGAGTCATAATAT+AGG | + | chr4.4:39782270-39782289 | MS.gene003907:intron | 35.0% | |
AGTGGTATGTAATTCGATGT+CGG | - | chr4.4:39784688-39784707 | None:intergenic | 35.0% | |
ATAGTGACTAGTAGTGTACA+TGG | + | chr4.4:39782224-39782243 | MS.gene003907:intron | 35.0% | |
CAAATGGGTGGTTACATTAA+GGG | + | chr4.4:39783316-39783335 | MS.gene003907:intron | 35.0% | |
CATCGAAGAAATGATGTATG+TGG | + | chr4.4:39782112-39782131 | MS.gene003907:intron | 35.0% | |
CTTTCGATTGAGGAAACTTA+TGG | - | chr4.4:39784375-39784394 | None:intergenic | 35.0% | |
GACATGTATTTATGAGTGCA+AGG | + | chr4.4:39782256-39782275 | MS.gene003907:intron | 35.0% | |
GATGTATGTGGTCTATTATG+TGG | + | chr4.4:39782124-39782143 | MS.gene003907:intron | 35.0% | |
GATTACATAGATACTCCTTC+CGG | + | chr4.4:39782061-39782080 | MS.gene003907:intron | 35.0% | |
GTCCAAAAGTTGTCAAAAAG+TGG | - | chr4.4:39782442-39782461 | None:intergenic | 35.0% | |
GTCGTTGGAAAAAGAAAACA+TGG | + | chr4.4:39781629-39781648 | MS.gene003907:CDS | 35.0% | |
TACCCTAAGGATACAAGTTA+AGG | - | chr4.4:39782907-39782926 | None:intergenic | 35.0% | |
TCAAATGGGTGGTTACATTA+AGG | + | chr4.4:39783315-39783334 | MS.gene003907:intron | 35.0% | |
TCAAGTGTAGAATCTCCAAA+GGG | - | chr4.4:39785315-39785334 | None:intergenic | 35.0% | |
TGAAAAGGGGGTTACATTTA+GGG | + | chr4.4:39783280-39783299 | MS.gene003907:intron | 35.0% | |
TTGAAAAGGGGGTTACATTT+AGG | + | chr4.4:39783279-39783298 | MS.gene003907:intron | 35.0% | |
TTGACAATTACTCTGTAGCA+GGG | + | chr4.4:39784303-39784322 | MS.gene003907:intron | 35.0% | |
TTTATCAAGAATTTGTCCCG+AGG | - | chr4.4:39782704-39782723 | None:intergenic | 35.0% | |
! | AGCGGATGAAGTACTAATAT+AGG | + | chr4.4:39783807-39783826 | MS.gene003907:intron | 35.0% |
! | ATACAATGTCAAGAGCACAA+GGG | + | chr4.4:39785222-39785241 | MS.gene003907:CDS | 35.0% |
! | CACATTCTGGAAATTTCATG+AGG | - | chr4.4:39782366-39782385 | None:intergenic | 35.0% |
! | GATAGTGTTGAATGTGTTGT+TGG | + | chr4.4:39785147-39785166 | MS.gene003907:CDS | 35.0% |
! | TAATGCTAACTTGTACCCTA+AGG | - | chr4.4:39782920-39782939 | None:intergenic | 35.0% |
!! | GATCCTTAACTTGTATCCTT+AGG | + | chr4.4:39782901-39782920 | MS.gene003907:intron | 35.0% |
!! | GATGGTGATGGAGAAATATT+TGG | - | chr4.4:39781468-39781487 | None:intergenic | 35.0% |
!! | TGACTTGCTGAGATTATTTG+TGG | - | chr4.4:39781394-39781413 | None:intergenic | 35.0% |
!!! | TTCTCTTTTGAGTTACTAGG+GGG | - | chr4.4:39781543-39781562 | None:intergenic | 35.0% |
!!! | TTTAGGCCCTCGAATTTTTT+AGG | - | chr4.4:39784791-39784810 | None:intergenic | 35.0% |
AAAGAGGAGTTAGATGGTGA+TGG | - | chr4.4:39781480-39781499 | None:intergenic | 40.0% | |
AAGAATCTTCATCGCTGCAT+AGG | - | chr4.4:39785116-39785135 | None:intergenic | 40.0% | |
AATAGCAGTGTCTTACCCTT+TGG | + | chr4.4:39785297-39785316 | MS.gene003907:CDS | 40.0% | |
ACGGAGCCTAAAAAATTCGA+GGG | + | chr4.4:39784782-39784801 | MS.gene003907:intron | 40.0% | |
ACTCTTGCTTCCACTTGAAA+TGG | - | chr4.4:39785177-39785196 | None:intergenic | 40.0% | |
AGAATGTTGCCAACACATTC+TGG | - | chr4.4:39782379-39782398 | None:intergenic | 40.0% | |
AGAGAGAAAAAGGAAGAGAG+AGG | - | chr4.4:39782499-39782518 | None:intergenic | 40.0% | |
CACTCAACAGAAACCTCAAA+AGG | + | chr4.4:39781606-39781625 | MS.gene003907:CDS | 40.0% | |
CATCAGCATCAAGGAAATTC+AGG | - | chr4.4:39781290-39781309 | None:intergenic | 40.0% | |
GAGTTTATGAACCCGAAACA+CGG | + | chr4.4:39783018-39783037 | MS.gene003907:intron | 40.0% | |
GCTGAGATTATTTGTGGAAG+TGG | - | chr4.4:39781388-39781407 | None:intergenic | 40.0% | |
GGCCTAAAAATACATTGGGA+CGG | - | chr4.4:39784329-39784348 | None:intergenic | 40.0% | |
GTCAAGTGTAGAATCTCCAA+AGG | - | chr4.4:39785316-39785335 | None:intergenic | 40.0% | |
GTTGACAATTACTCTGTAGC+AGG | + | chr4.4:39784302-39784321 | MS.gene003907:intron | 40.0% | |
TACGGAGCCTAAAAAATTCG+AGG | + | chr4.4:39784781-39784800 | MS.gene003907:intron | 40.0% | |
TCATGGTAGAGATCACATCA+TGG | + | chr4.4:39781686-39781705 | MS.gene003907:CDS | 40.0% | |
TGCAAGAGCAATGAAGGTTT+GGG | - | chr4.4:39781739-39781758 | None:intergenic | 40.0% | |
! | AGTTACTAGGGGGTGAATTT+TGG | - | chr4.4:39781533-39781552 | None:intergenic | 40.0% |
! | GATACAATGTCAAGAGCACA+AGG | + | chr4.4:39785221-39785240 | MS.gene003907:CDS | 40.0% |
! | GTTACTAGGGGGTGAATTTT+GGG | - | chr4.4:39781532-39781551 | None:intergenic | 40.0% |
! | TACAATGTCAAGAGCACAAG+GGG | + | chr4.4:39785223-39785242 | MS.gene003907:CDS | 40.0% |
! | TTACTAGGGGGTGAATTTTG+GGG | - | chr4.4:39781531-39781550 | None:intergenic | 40.0% |
! | TTTTTCCAACGACCCTTTTG+AGG | - | chr4.4:39781622-39781641 | None:intergenic | 40.0% |
!! | CAAGTGGAAGCAAGAGTATT+AGG | + | chr4.4:39785180-39785199 | MS.gene003907:CDS | 40.0% |
!! | TGTTGGTTCACCATTTCAAG+TGG | + | chr4.4:39785164-39785183 | MS.gene003907:CDS | 40.0% |
!! | TTTTGGGGGTTGTCAAAAGA+TGG | - | chr4.4:39781516-39781535 | None:intergenic | 40.0% |
AAGAGCTGCAAGAGCAATGA+AGG | - | chr4.4:39781745-39781764 | None:intergenic | 45.0% | |
AATCACAATTCATGCTGGCC+CGG | - | chr4.4:39782669-39782688 | None:intergenic | 45.0% | |
ACAATGCTACATAGTAGGGC+TGG | - | chr4.4:39784843-39784862 | None:intergenic | 45.0% | |
AGAAACCTCAAAAGGGTCGT+TGG | + | chr4.4:39781614-39781633 | MS.gene003907:CDS | 45.0% | |
ATCAGTGTCTCCAACCGAAT+TGG | + | chr4.4:39781572-39781591 | MS.gene003907:CDS | 45.0% | |
ATGTTCACTCGAAGCTCAAG+TGG | - | chr4.4:39784706-39784725 | None:intergenic | 45.0% | |
CTGCAAGAGCAATGAAGGTT+TGG | - | chr4.4:39781740-39781759 | None:intergenic | 45.0% | |
GCAAAGGGGGGTTACATTAA+GGG | - | chr4.4:39783078-39783097 | None:intergenic | 45.0% | |
GGACCAATCACAATTCATGC+TGG | - | chr4.4:39782674-39782693 | None:intergenic | 45.0% | |
TCCTTGATGCTGATGTAGGA+GGG | + | chr4.4:39781295-39781314 | MS.gene003907:CDS | 45.0% | |
TGCAAAGGGGGGTTACATTA+AGG | - | chr4.4:39783079-39783098 | None:intergenic | 45.0% | |
TGGGTGGTTACATTAAGGGA+CGG | + | chr4.4:39783320-39783339 | MS.gene003907:intron | 45.0% | |
TGGTTACATTAAGGGACGGA+GGG | + | chr4.4:39783324-39783343 | MS.gene003907:intron | 45.0% | |
TTCCTTGATGCTGATGTAGG+AGG | + | chr4.4:39781294-39781313 | MS.gene003907:CDS | 45.0% | |
TTTATGAACCCGAAACACGG+TGG | + | chr4.4:39783021-39783040 | MS.gene003907:intron | 45.0% | |
! | AATTTGTCCCGAGGCTTTGT+TGG | - | chr4.4:39782695-39782714 | None:intergenic | 45.0% |
! | GGCCGTCCCAATGTATTTTT+AGG | + | chr4.4:39784324-39784343 | MS.gene003907:intron | 45.0% |
! | TACTAGGGGGTGAATTTTGG+GGG | - | chr4.4:39781530-39781549 | None:intergenic | 45.0% |
! | TGATTGGTCCAACAAAGCCT+CGG | + | chr4.4:39782684-39782703 | MS.gene003907:intron | 45.0% |
!! | ACATAGTAGGGCTGGTCTAA+GGG | - | chr4.4:39784835-39784854 | None:intergenic | 45.0% |
!! | TACATAGTAGGGCTGGTCTA+AGG | - | chr4.4:39784836-39784855 | None:intergenic | 45.0% |
!!! | AACCACGATGCCGTTTTTTC+CGG | + | chr4.4:39782647-39782666 | MS.gene003907:intron | 45.0% |
!!! | ACGAGGCCTTTTGCTTTTTG+AGG | - | chr4.4:39781664-39781683 | None:intergenic | 45.0% |
!! | ATATAATAAAAAAATGAAAA+AGG | + | chr4.4:39784051-39784070 | MS.gene003907:intron | 5.0% |
!!! | TAAAAGTAAAATTATTTTTT+TGG | + | chr4.4:39782801-39782820 | MS.gene003907:intron | 5.0% |
!!! | TTATATTTTAAAAATATTGA+AGG | + | chr4.4:39781952-39781971 | MS.gene003907:intron | 5.0% |
AAACACGGTGGCCTATCAAC+TGG | + | chr4.4:39783033-39783052 | MS.gene003907:intron | 50.0% | |
AAATGCTGGATAACGCGAGG+TGG | + | chr4.4:39782338-39782357 | MS.gene003907:intron | 50.0% | |
ACCCTCCTACATCAGCATCA+AGG | - | chr4.4:39781299-39781318 | None:intergenic | 50.0% | |
AGGGGGGTTACATTAAGGGA+CGG | - | chr4.4:39783074-39783093 | None:intergenic | 50.0% | |
ATCGCTGCATAGGCATGGTT+TGG | - | chr4.4:39785106-39785125 | None:intergenic | 50.0% | |
GGAAAATGCTGGATAACGCG+AGG | + | chr4.4:39782335-39782354 | MS.gene003907:intron | 50.0% | |
GGGCCAGCATGAATTGTGAT+TGG | + | chr4.4:39782668-39782687 | MS.gene003907:intron | 50.0% | |
GGGTTACATTAAGGGACGGA+GGG | - | chr4.4:39783070-39783089 | None:intergenic | 50.0% | |
GTGGTTACATTAAGGGACGG+AGG | + | chr4.4:39783323-39783342 | MS.gene003907:intron | 50.0% | |
TCATGCTGGCCCGGAAAAAA+CGG | - | chr4.4:39782660-39782679 | None:intergenic | 50.0% | |
TCTTCATCGCTGCATAGGCA+TGG | - | chr4.4:39785111-39785130 | None:intergenic | 50.0% | |
TGATCTCTACCATGAGCACG+AGG | - | chr4.4:39781681-39781700 | None:intergenic | 50.0% | |
TTGATAGGCCACCGTGTTTC+GGG | - | chr4.4:39783032-39783051 | None:intergenic | 50.0% | |
! | GATTGGTCCAACAAAGCCTC+GGG | + | chr4.4:39782685-39782704 | MS.gene003907:intron | 50.0% |
! | GTTGATAGGCCACCGTGTTT+CGG | - | chr4.4:39783033-39783052 | None:intergenic | 50.0% |
!! | ATAGTAGGGCTGGTCTAAGG+GGG | - | chr4.4:39784833-39784852 | None:intergenic | 50.0% |
!! | CATAGTAGGGCTGGTCTAAG+GGG | - | chr4.4:39784834-39784853 | None:intergenic | 50.0% |
!!! | ACCACGATGCCGTTTTTTCC+GGG | + | chr4.4:39782648-39782667 | MS.gene003907:intron | 50.0% |
AGCAAAAGGCCTCGTGCTCA+TGG | + | chr4.4:39781669-39781688 | MS.gene003907:CDS | 55.0% | |
GCCACTAAAGCAGGGGCTTT+AGG | - | chr4.4:39784808-39784827 | None:intergenic | 55.0% | |
GCCTAAAGCCCCTGCTTTAG+TGG | + | chr4.4:39784804-39784823 | MS.gene003907:intron | 55.0% | |
GGGGTTACATTAAGGGACGG+AGG | - | chr4.4:39783071-39783090 | None:intergenic | 55.0% | |
AAGGGGGCTGCCACTAAAGC+AGG | - | chr4.4:39784817-39784836 | None:intergenic | 60.0% | |
AGGGGGCTGCCACTAAAGCA+GGG | - | chr4.4:39784816-39784835 | None:intergenic | 60.0% | |
GCCCGGAAAAAACGGCATCG+TGG | - | chr4.4:39782652-39782671 | None:intergenic | 60.0% | |
GGGGGCTGCCACTAAAGCAG+GGG | - | chr4.4:39784815-39784834 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 39781249 | 39785353 | 39781249 | ID=MS.gene003907 |
chr4.4 | mRNA | 39781249 | 39785353 | 39781249 | ID=MS.gene003907.t1;Parent=MS.gene003907 |
chr4.4 | exon | 39781249 | 39781782 | 39781249 | ID=MS.gene003907.t1.exon1;Parent=MS.gene003907.t1 |
chr4.4 | CDS | 39781249 | 39781782 | 39781249 | ID=cds.MS.gene003907.t1;Parent=MS.gene003907.t1 |
chr4.4 | exon | 39784994 | 39785353 | 39784994 | ID=MS.gene003907.t1.exon2;Parent=MS.gene003907.t1 |
chr4.4 | CDS | 39784994 | 39785353 | 39784994 | ID=cds.MS.gene003907.t1;Parent=MS.gene003907.t1 |
Gene Sequence |
Protein sequence |