AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003967

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003967.t1 MTR_4g065017 96.418 335 7 3 1 333 1 332 0.0 659
MS.gene003967.t1 MTR_2g097910 58.807 352 87 14 1 328 1 318 4.99e-114 333
MS.gene003967.t1 MTR_3g028740 84.000 125 15 1 1 120 3 127 1.68e-72 228
MS.gene003967.t1 MTR_1g085040 80.374 107 21 0 14 120 11 117 5.68e-59 194
MS.gene003967.t1 MTR_2g099740 75.229 109 27 0 11 119 8 116 1.34e-57 191
MS.gene003967.t1 MTR_7g110830 77.570 107 24 0 14 120 11 117 7.99e-57 188
MS.gene003967.t1 MTR_3g077110 79.245 106 22 0 14 119 11 116 1.06e-56 187
MS.gene003967.t1 MTR_4g105130 78.302 106 23 0 14 119 11 116 1.53e-56 187
MS.gene003967.t1 MTR_1g112760 77.358 106 24 0 14 119 12 117 3.24e-56 182
MS.gene003967.t1 MTR_1g085640 75.701 107 26 0 14 120 11 117 9.91e-56 186
MS.gene003967.t1 MTR_7g111290 82.828 99 17 0 14 112 11 109 4.58e-55 184
MS.gene003967.t1 MTR_8g017440 71.560 109 31 0 11 119 8 116 2.39e-54 181
MS.gene003967.t1 MTR_8g017540 71.560 109 31 0 11 119 54 162 6.22e-54 182
MS.gene003967.t1 MTR_8g017500 69.725 109 33 0 11 119 8 116 3.95e-53 178
MS.gene003967.t1 MTR_8g098860 68.182 110 35 0 11 120 8 117 4.20e-53 177
MS.gene003967.t1 MTR_1g100667 71.818 110 31 0 10 119 8 117 5.26e-52 173
MS.gene003967.t1 MTR_5g010020 56.579 152 58 3 11 162 8 151 6.13e-52 175
MS.gene003967.t1 MTR_2g064160 50.000 182 80 5 14 188 10 187 1.13e-50 171
MS.gene003967.t1 MTR_8g017390 69.027 113 34 1 8 119 5 117 3.09e-50 174
MS.gene003967.t1 MTR_8g017340 72.897 107 28 1 14 119 11 117 5.95e-50 173
MS.gene003967.t1 MTR_4g082230 53.793 145 60 1 14 158 11 148 9.78e-50 171
MS.gene003967.t1 MTR_6g055910 58.955 134 52 1 5 135 4 137 1.08e-49 167
MS.gene003967.t1 MTR_4g082290 54.861 144 58 1 15 158 12 148 1.56e-49 170
MS.gene003967.t1 MTR_2g011660 66.667 111 37 0 12 122 10 120 3.62e-49 168
MS.gene003967.t1 MTR_8g017350 71.963 107 29 1 14 119 11 117 8.99e-49 173
MS.gene003967.t1 MTR_5g079670 52.632 152 56 3 1 152 1 136 1.19e-48 162
MS.gene003967.t1 MTR_3g097450 69.903 103 31 0 17 119 14 116 1.27e-48 165
MS.gene003967.t1 MTR_4g091490 64.602 113 40 0 10 122 8 120 2.01e-48 166
MS.gene003967.t1 MTR_4g073420 48.824 170 73 3 17 184 14 171 2.41e-48 164
MS.gene003967.t1 MTR_2g089620 60.000 130 45 1 13 142 10 132 6.68e-48 164
MS.gene003967.t1 MTR_8g095390 66.990 103 34 0 17 119 14 116 9.58e-48 163
MS.gene003967.t1 MTR_3g074520 62.500 112 42 0 11 122 8 119 1.53e-47 164
MS.gene003967.t1 MTR_5g078140 57.895 133 49 1 15 140 12 144 2.62e-47 162
MS.gene003967.t1 MTR_7g011170 64.815 108 38 0 15 122 12 119 6.32e-47 161
MS.gene003967.t1 MTR_2g089450 64.286 112 40 0 15 126 12 123 7.82e-47 159
MS.gene003967.t1 MTR_6g012690 65.741 108 37 0 15 122 12 119 7.95e-47 162
MS.gene003967.t1 MTR_3g065440 66.667 108 36 0 15 122 12 119 8.23e-47 160
MS.gene003967.t1 MTR_7g115650 42.857 203 95 5 15 217 12 193 1.43e-46 157
MS.gene003967.t1 MTR_7g076740 56.489 131 54 2 15 142 12 142 1.43e-46 160
MS.gene003967.t1 MTR_1g100653 57.895 114 48 0 15 128 12 125 3.12e-46 159
MS.gene003967.t1 MTR_5g029840 55.814 129 50 1 15 143 12 133 5.19e-46 159
MS.gene003967.t1 MTR_4g102380 63.889 108 39 0 15 122 12 119 1.19e-45 156
MS.gene003967.t1 MTR_4g485530 48.538 171 73 4 1 161 1 166 1.45e-45 154
MS.gene003967.t1 MTR_4g125520 45.732 164 89 0 15 178 12 175 1.96e-45 157
MS.gene003967.t1 MTR_4g478180 55.385 130 51 1 13 142 11 133 3.05e-45 158
MS.gene003967.t1 MTR_5g007370 52.817 142 56 2 1 142 2 132 4.87e-45 155
MS.gene003967.t1 MTR_7g035075 44.776 201 95 5 1 193 1 193 5.98e-45 152
MS.gene003967.t1 MTR_1g076150 60.345 116 46 0 15 130 12 127 9.78e-45 154
MS.gene003967.t1 MTR_8g031360 61.062 113 43 1 11 122 9 121 1.03e-44 155
MS.gene003967.t1 MTR_6g009430 57.143 112 48 0 11 122 8 119 4.07e-44 154
MS.gene003967.t1 MTR_4g121460 57.627 118 46 1 15 128 12 129 2.65e-43 152
MS.gene003967.t1 MTR_1g043050 62.162 111 42 0 15 125 12 122 3.07e-43 150
MS.gene003967.t1 MTR_3g461490 61.111 108 42 0 15 122 12 119 3.17e-43 152
MS.gene003967.t1 MTR_2g089420 42.647 204 110 3 11 207 7 210 5.79e-43 154
MS.gene003967.t1 MTR_2g034790 49.068 161 74 3 15 173 12 166 6.01e-43 151
MS.gene003967.t1 MTR_7g117730 59.813 107 43 0 15 121 12 118 7.27e-43 149
MS.gene003967.t1 MTR_0251s0050 57.018 114 49 0 8 121 6 119 1.48e-42 148
MS.gene003967.t1 MTR_8g020490 61.111 108 42 0 17 124 10 117 1.72e-42 148
MS.gene003967.t1 MTR_1g043080 62.857 105 39 0 15 119 12 116 2.23e-42 147
MS.gene003967.t1 MTR_3g083540 59.813 107 43 0 15 121 41 147 2.73e-42 149
MS.gene003967.t1 MTR_1g110460 52.500 120 57 0 3 122 14 133 4.23e-42 148
MS.gene003967.t1 MTR_6g006030 56.757 111 48 0 12 122 11 121 4.72e-42 145
MS.gene003967.t1 MTR_7g096930 61.905 105 40 0 15 119 12 116 8.28e-42 147
MS.gene003967.t1 MTR_0008s0390 60.377 106 42 0 13 118 11 116 1.25e-41 146
MS.gene003967.t1 MTR_1g045610 62.264 106 40 0 16 121 22 127 3.22e-41 144
MS.gene003967.t1 MTR_5g042030 61.111 108 42 0 15 122 7 114 5.75e-41 145
MS.gene003967.t1 MTR_8g027345 59.434 106 43 0 15 120 12 117 7.45e-41 145
MS.gene003967.t1 MTR_4g100720 59.091 110 45 0 9 118 7 116 1.57e-40 140
MS.gene003967.t1 MTR_0008s0470 56.140 114 49 1 13 125 11 124 2.41e-40 143
MS.gene003967.t1 MTR_2g067420 61.165 103 40 0 11 113 10 112 3.48e-40 144
MS.gene003967.t1 MTR_7g087130 54.701 117 53 0 15 131 12 128 4.16e-40 144
MS.gene003967.t1 MTR_0140s0030 52.756 127 59 1 15 140 13 139 5.17e-40 144
MS.gene003967.t1 MTR_0489s0020 52.756 127 59 1 15 140 13 139 5.17e-40 144
MS.gene003967.t1 MTR_7g010210 59.434 106 43 0 15 120 12 117 6.91e-40 143
MS.gene003967.t1 MTR_3g039990 52.893 121 57 0 15 135 13 133 7.88e-40 142
MS.gene003967.t1 MTR_7g010210 59.434 106 43 0 15 120 12 117 9.51e-40 141
MS.gene003967.t1 MTR_3g052430 57.547 106 45 0 15 120 41 146 4.30e-39 145
MS.gene003967.t1 MTR_3g052450 57.547 106 45 0 15 120 40 145 5.03e-39 145
MS.gene003967.t1 MTR_1g017000 53.271 107 49 1 14 119 11 117 5.16e-39 139
MS.gene003967.t1 MTR_1g017140 40.678 177 94 3 11 176 8 184 5.27e-39 141
MS.gene003967.t1 MTR_1g073170 59.259 108 44 0 14 121 19 126 5.88e-39 139
MS.gene003967.t1 MTR_5g014990 40.541 185 100 3 11 185 8 192 7.84e-39 140
MS.gene003967.t1 MTR_8g042410 57.692 104 44 0 15 118 37 140 1.68e-38 144
MS.gene003967.t1 MTR_6g012180 61.616 99 38 0 15 113 12 110 2.03e-38 139
MS.gene003967.t1 MTR_1g086510 51.667 120 58 0 7 126 13 132 2.05e-38 137
MS.gene003967.t1 MTR_1g086530 50.833 120 59 0 7 126 25 144 2.22e-38 138
MS.gene003967.t1 MTR_1g021230 58.654 104 43 0 15 118 57 160 3.39e-38 141
MS.gene003967.t1 MTR_1g062940 55.660 106 47 0 15 120 6 111 6.81e-38 135
MS.gene003967.t1 MTR_3g011610 55.660 106 47 0 15 120 37 142 7.21e-38 141
MS.gene003967.t1 MTR_4g057635 52.991 117 54 1 11 126 8 124 1.79e-37 136
MS.gene003967.t1 MTR_4g063100 52.212 113 54 0 16 128 8 120 3.74e-37 134
MS.gene003967.t1 MTR_0008s0280 56.863 102 44 0 16 117 13 114 1.16e-36 132
MS.gene003967.t1 MTR_0063s0090 55.882 102 45 0 15 116 12 113 1.30e-36 131
MS.gene003967.t1 MTR_2g096380 45.985 137 61 1 14 137 5 141 2.74e-36 131
MS.gene003967.t1 MTR_3g103570 52.727 110 51 1 11 119 8 117 3.80e-36 134
MS.gene003967.t1 MTR_2g033170 56.481 108 47 0 15 122 24 131 4.23e-36 133
MS.gene003967.t1 MTR_5g078910 55.238 105 47 0 15 119 7 111 6.67e-36 132
MS.gene003967.t1 MTR_7g111290 87.879 66 8 0 47 112 2 67 8.58e-36 132
MS.gene003967.t1 MTR_7g109320 56.522 115 50 0 15 129 12 126 9.39e-36 133
MS.gene003967.t1 MTR_7g102110 52.294 109 51 1 15 122 12 120 1.38e-35 130
MS.gene003967.t1 MTR_2g088170 57.547 106 45 0 15 120 29 134 1.61e-35 134
MS.gene003967.t1 MTR_6g090405 51.695 118 56 1 11 127 8 125 3.11e-35 129
MS.gene003967.t1 MTR_2g095520 58.000 100 41 1 15 113 12 111 3.93e-35 130
MS.gene003967.t1 MTR_0197s0010 51.786 112 54 0 20 131 6 117 4.67e-35 127
MS.gene003967.t1 MTR_1g083630 51.754 114 55 0 7 120 4 117 1.27e-34 134
MS.gene003967.t1 MTR_5g079220 54.286 105 48 0 15 119 21 125 1.74e-34 127
MS.gene003967.t1 MTR_5g079290 52.381 105 50 0 15 119 17 121 2.70e-34 127
MS.gene003967.t1 MTR_5g078800 54.286 105 48 0 15 119 7 111 2.97e-34 126
MS.gene003967.t1 MTR_0247s0040 53.774 106 49 0 11 116 3 108 3.05e-34 124
MS.gene003967.t1 MTR_5g079120 50.909 110 54 0 10 119 56 165 5.38e-34 127
MS.gene003967.t1 MTR_4g123040 50.427 117 58 0 6 122 15 131 8.89e-34 126
MS.gene003967.t1 MTR_4g097570 55.340 103 45 1 11 112 8 110 9.24e-34 126
MS.gene003967.t1 MTR_5g062790 36.842 190 109 4 16 200 10 193 1.19e-33 126
MS.gene003967.t1 MTR_0193s0090 52.336 107 51 0 11 117 3 109 3.95e-33 122
MS.gene003967.t1 MTR_8g060940 52.830 106 50 0 10 115 2 107 5.46e-33 122
MS.gene003967.t1 MTR_4g128670 53.922 102 46 1 13 113 10 111 1.35e-32 124
MS.gene003967.t1 MTR_7g017260 51.351 111 52 1 11 119 21 131 2.30e-32 122
MS.gene003967.t1 MTR_5g078860 51.429 105 51 0 15 119 7 111 2.59e-32 122
MS.gene003967.t1 MTR_5g088080 41.667 144 77 3 16 158 13 150 2.91e-32 121
MS.gene003967.t1 MTR_5g088150 41.667 144 77 3 16 158 13 150 2.91e-32 121
MS.gene003967.t1 MTR_5g488210 41.667 144 77 3 16 158 13 150 2.91e-32 121
MS.gene003967.t1 MTR_4g097570 54.808 104 45 2 11 112 8 111 3.39e-32 122
MS.gene003967.t1 MTR_5g088640 41.667 144 77 3 16 158 13 150 3.60e-32 121
MS.gene003967.t1 MTR_5g078950 50.000 106 53 0 11 116 3 108 4.94e-32 120
MS.gene003967.t1 MTR_6g055910 61.538 91 32 1 48 135 18 108 6.86e-32 120
MS.gene003967.t1 MTR_5g078930 52.830 106 49 1 12 116 5 110 7.15e-32 119
MS.gene003967.t1 MTR_0001s0360 51.429 105 51 0 15 119 7 111 7.21e-32 120
MS.gene003967.t1 MTR_5g488170 41.667 144 77 3 16 158 13 150 7.63e-32 119
MS.gene003967.t1 MTR_8g006470 49.123 114 56 2 10 122 5 117 1.16e-30 117
MS.gene003967.t1 MTR_4g063100 58.537 82 34 0 47 128 10 91 3.37e-30 114
MS.gene003967.t1 MTR_4g128190 49.153 118 46 2 7 123 3 107 5.65e-30 114
MS.gene003967.t1 MTR_5g007300 63.291 79 29 0 13 91 62 140 2.81e-29 109
MS.gene003967.t1 MTR_4g029540 45.833 120 64 1 15 133 10 129 4.12e-29 114
MS.gene003967.t1 MTR_5g088610 50.000 106 52 1 16 120 10 115 5.46e-29 114
MS.gene003967.t1 MTR_2g096380 50.000 104 39 1 47 137 19 122 6.61e-29 111
MS.gene003967.t1 MTR_4g094982 39.205 176 88 5 17 180 5 173 1.33e-28 112
MS.gene003967.t1 MTR_3g463400 45.763 118 62 2 15 132 131 246 4.66e-28 113
MS.gene003967.t1 MTR_5g016510 48.113 106 54 1 17 122 5 109 1.26e-27 110
MS.gene003967.t1 MTR_5g070020 40.288 139 79 2 15 150 120 257 2.25e-27 110
MS.gene003967.t1 MTR_1g085880 52.212 113 52 2 7 117 3 115 2.75e-27 106
MS.gene003967.t1 MTR_4g019370 50.980 102 49 1 17 118 38 138 6.41e-27 108
MS.gene003967.t1 MTR_5g049190 46.729 107 56 1 11 117 13 118 1.16e-26 105
MS.gene003967.t1 MTR_3g045430 42.241 116 67 0 7 122 5 120 1.37e-26 107
MS.gene003967.t1 MTR_1g085770 52.212 113 52 2 7 117 3 115 1.44e-26 107
MS.gene003967.t1 MTR_3g101290 47.863 117 60 1 17 133 37 152 5.81e-26 103
MS.gene003967.t1 MTR_6g015455 50.000 102 50 1 17 118 5 105 6.06e-26 109
MS.gene003967.t1 MTR_7g061330 46.296 108 57 1 12 119 108 214 1.36e-25 107
MS.gene003967.t1 MTR_7g461410 46.296 108 57 1 12 119 108 214 1.36e-25 107
MS.gene003967.t1 MTR_3g110028 46.296 108 57 1 12 119 80 186 1.75e-25 107
MS.gene003967.t1 MTR_7g061330 46.296 108 57 1 12 119 72 178 2.29e-25 106
MS.gene003967.t1 MTR_3g077650 44.444 117 62 2 2 118 168 281 5.24e-25 105
MS.gene003967.t1 MTR_6g027360 41.880 117 65 2 12 127 73 187 6.95e-25 102
MS.gene003967.t1 MTR_6g027340 40.171 117 67 2 12 127 11 125 3.40e-24 98.2
MS.gene003967.t1 MTR_1g057980 47.000 100 52 1 15 114 78 176 4.53e-24 100
MS.gene003967.t1 MTR_5g082910 47.664 107 55 1 9 115 11 116 1.29e-23 99.0
MS.gene003967.t1 MTR_6g074860 45.545 101 54 1 17 117 4 103 1.48e-23 97.4
MS.gene003967.t1 MTR_4g105660 41.818 110 63 1 9 118 172 280 1.71e-23 100
MS.gene003967.t1 MTR_6g027370 42.735 117 65 2 12 127 93 208 2.14e-23 99.4
MS.gene003967.t1 MTR_7g035350 44.444 108 57 2 17 124 225 329 4.23e-23 99.8
MS.gene003967.t1 MTR_1g026870 43.519 108 60 1 12 119 80 186 5.34e-23 100
MS.gene003967.t1 MTR_5g041570 41.441 111 64 1 13 123 130 239 5.72e-23 99.4
MS.gene003967.t1 MTR_4g082040 42.149 121 66 3 5 124 94 211 6.91e-23 99.0
MS.gene003967.t1 MTR_7g451170 42.157 102 58 1 17 118 191 291 2.31e-22 97.1
MS.gene003967.t1 MTR_7g037260 42.202 109 61 2 17 125 145 251 3.20e-22 96.3
MS.gene003967.t1 MTR_4g088015 41.584 101 58 1 17 117 221 320 9.18e-22 95.9
MS.gene003967.t1 MTR_7g450950 38.261 115 70 1 17 131 157 270 8.73e-21 91.7
MS.gene003967.t1 MTR_5g010650 44.118 102 56 1 11 112 104 204 5.43e-20 90.9
MS.gene003967.t1 MTR_3g089045 42.593 108 59 2 17 123 16 121 5.71e-20 89.0
MS.gene003967.t1 MTR_7g037130 39.450 109 64 2 17 125 145 251 7.11e-19 86.7
MS.gene003967.t1 MTR_7g086960 42.157 102 58 1 17 118 89 189 1.25e-18 85.9
MS.gene003967.t1 MTR_0023s0210 49.383 81 41 0 11 91 3 83 4.61e-18 78.2
MS.gene003967.t1 MTR_7g061550 39.362 94 55 1 20 111 10 103 9.17e-16 77.8
MS.gene003967.t1 MTR_5g038910 36.634 101 63 1 20 120 29 128 9.76e-16 77.8
MS.gene003967.t1 MTR_5g038910 36.634 101 63 1 20 120 29 128 1.14e-15 77.8
MS.gene003967.t1 MTR_8g468380 36.283 113 70 2 20 131 25 136 1.68e-15 77.4
MS.gene003967.t1 MTR_8g017480 64.444 45 16 0 11 55 8 52 2.94e-15 69.7
MS.gene003967.t1 MTR_6g055910 51.515 66 29 1 73 135 2 67 2.00e-14 71.6
MS.gene003967.t1 MTR_4g063100 50.000 56 28 0 73 128 1 56 1.04e-13 68.9
MS.gene003967.t1 MTR_2g096380 42.308 78 32 1 73 137 1 78 2.60e-13 67.8
MS.gene003967.t1 MTR_1g008970 36.145 83 53 0 37 119 110 192 7.46e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003967.t1 AT3G08500 47.592 353 133 14 3 331 16 340 3.01e-76 238
MS.gene003967.t1 AT5G12870 82.540 126 19 1 1 123 1 126 4.40e-71 222
MS.gene003967.t1 AT1G09540 79.439 107 22 0 14 120 11 117 7.19e-59 194
MS.gene003967.t1 AT5G26660 79.439 107 22 0 14 120 11 117 7.46e-58 191
MS.gene003967.t1 AT1G57560 78.302 106 23 0 14 119 11 116 1.13e-57 188
MS.gene003967.t1 AT1G57560 78.302 106 23 0 14 119 11 116 1.25e-57 189
MS.gene003967.t1 AT3G13890 75.229 109 27 0 11 119 8 116 1.30e-57 190
MS.gene003967.t1 AT4G01680 77.570 107 24 0 14 120 11 117 2.47e-57 186
MS.gene003967.t1 AT4G01680 77.570 107 24 0 14 120 11 117 1.72e-56 187
MS.gene003967.t1 AT3G13890 69.492 118 27 1 11 119 8 125 1.57e-54 182
MS.gene003967.t1 AT1G63910 68.182 110 35 0 11 120 8 117 6.36e-53 178
MS.gene003967.t1 AT4G01680 69.748 119 24 1 14 120 11 129 6.53e-53 177
MS.gene003967.t1 AT3G12720 67.925 106 34 0 14 119 21 126 3.97e-50 169
MS.gene003967.t1 AT4G05100 68.519 108 34 0 15 122 13 120 9.36e-50 169
MS.gene003967.t1 AT4G21440 68.519 108 34 0 15 122 12 119 2.63e-49 168
MS.gene003967.t1 AT2G16720 51.829 164 66 2 17 178 14 166 5.31e-49 165
MS.gene003967.t1 AT5G54230 67.593 108 35 0 15 122 12 119 1.38e-48 166
MS.gene003967.t1 AT1G22640 61.864 118 43 1 13 130 10 125 3.19e-48 163
MS.gene003967.t1 AT3G02940 56.061 132 51 1 11 142 8 132 4.81e-48 164
MS.gene003967.t1 AT5G10280 63.393 112 41 0 11 122 8 119 6.48e-48 164
MS.gene003967.t1 AT3G02940 56.061 132 51 1 11 142 8 132 8.76e-48 164
MS.gene003967.t1 AT3G02940 56.061 132 51 1 11 142 8 132 8.76e-48 164
MS.gene003967.t1 AT4G12350 63.717 113 41 0 15 127 12 124 1.05e-47 162
MS.gene003967.t1 AT4G09460 66.990 103 34 0 17 119 14 116 1.17e-47 160
MS.gene003967.t1 AT4G34990 67.961 103 33 0 17 119 14 116 1.47e-47 162
MS.gene003967.t1 AT3G01140 65.741 108 37 0 15 122 12 119 2.06e-47 163
MS.gene003967.t1 AT5G65230 64.815 108 38 0 15 122 12 119 4.26e-47 161
MS.gene003967.t1 AT4G38620 56.934 137 58 1 17 152 14 150 4.55e-47 160
MS.gene003967.t1 AT4G28110 66.667 105 35 0 15 119 12 116 6.01e-47 160
MS.gene003967.t1 AT3G01140 63.393 112 41 0 11 122 51 162 6.51e-47 163
MS.gene003967.t1 AT5G15310 64.815 108 38 0 15 122 12 119 7.64e-47 159
MS.gene003967.t1 AT5G15310 64.815 108 38 0 15 122 12 119 8.48e-47 161
MS.gene003967.t1 AT5G15310 64.815 108 38 0 15 122 12 119 9.95e-47 160
MS.gene003967.t1 AT5G61420 46.988 166 87 1 15 180 12 176 1.38e-46 162
MS.gene003967.t1 AT2G31180 53.147 143 64 2 15 156 12 152 1.61e-46 158
MS.gene003967.t1 AT5G60890 53.125 128 56 1 15 138 12 139 2.14e-46 159
MS.gene003967.t1 AT3G48920 64.815 108 38 0 10 117 13 120 2.61e-46 158
MS.gene003967.t1 AT5G14340 56.923 130 53 1 15 141 24 153 3.93e-46 158
MS.gene003967.t1 AT5G14750 57.500 120 50 1 1 119 1 120 5.84e-46 155
MS.gene003967.t1 AT1G66230 65.741 108 37 0 15 122 12 119 7.26e-46 157
MS.gene003967.t1 AT4G25560 63.025 119 43 1 6 123 1 119 1.01e-45 157
MS.gene003967.t1 AT1G34670 62.963 108 40 0 15 122 12 119 1.69e-45 159
MS.gene003967.t1 AT3G27920 48.649 148 70 1 10 157 9 150 2.29e-45 154
MS.gene003967.t1 AT3G61250 62.037 108 41 0 15 122 12 119 2.38e-45 157
MS.gene003967.t1 AT5G16600 63.889 108 39 0 15 122 12 119 2.69e-45 157
MS.gene003967.t1 AT5G16770 54.688 128 51 1 15 142 12 132 3.87e-45 157
MS.gene003967.t1 AT5G16770 54.688 128 51 1 15 142 12 132 3.87e-45 157
MS.gene003967.t1 AT3G23250 60.748 107 42 0 15 121 12 118 4.49e-45 155
MS.gene003967.t1 AT1G35515 60.550 109 43 0 13 121 10 118 5.33e-45 153
MS.gene003967.t1 AT5G16770 54.688 128 51 1 15 142 12 132 6.50e-45 156
MS.gene003967.t1 AT5G16770 54.688 128 51 1 15 142 12 132 6.50e-45 156
MS.gene003967.t1 AT1G74430 64.762 105 37 0 15 119 12 116 6.75e-45 154
MS.gene003967.t1 AT1G18570 64.762 105 37 0 15 119 13 117 7.57e-45 157
MS.gene003967.t1 AT5G52600 43.503 177 90 2 5 173 2 176 8.53e-45 152
MS.gene003967.t1 AT3G27810 46.429 168 80 2 13 179 18 176 9.36e-45 153
MS.gene003967.t1 AT4G22680 62.963 108 40 0 15 122 12 119 1.11e-44 154
MS.gene003967.t1 AT1G06180 66.667 105 35 0 15 119 12 116 1.80e-44 153
MS.gene003967.t1 AT5G52260 69.903 103 31 0 16 118 13 115 2.05e-44 153
MS.gene003967.t1 AT5G40330 48.951 143 68 1 16 158 13 150 2.45e-44 151
MS.gene003967.t1 AT3G01530 56.452 124 53 1 3 125 12 135 9.62e-44 149
MS.gene003967.t1 AT2G47460 61.111 108 42 0 15 122 12 119 2.30e-43 153
MS.gene003967.t1 AT5G56110 60.550 109 43 0 15 123 12 120 3.17e-43 152
MS.gene003967.t1 AT5G07690 54.331 127 56 1 15 141 12 136 4.98e-43 151
MS.gene003967.t1 AT5G07700 60.952 105 41 0 15 119 12 116 5.67e-43 151
MS.gene003967.t1 AT5G07700 60.952 105 41 0 15 119 12 116 5.67e-43 151
MS.gene003967.t1 AT5G40350 57.407 108 46 0 12 119 14 121 5.76e-43 148
MS.gene003967.t1 AT1G56160 52.941 136 64 0 11 146 10 145 6.61e-43 150
MS.gene003967.t1 AT1G79180 56.000 125 55 0 11 135 10 134 8.92e-43 150
MS.gene003967.t1 AT4G17785 60.185 108 43 0 15 122 13 120 9.68e-43 151
MS.gene003967.t1 AT4G17785 60.185 108 43 0 15 122 13 120 1.08e-42 151
MS.gene003967.t1 AT1G16490 45.614 171 78 2 11 169 10 177 1.61e-42 149
MS.gene003967.t1 AT3G62610 56.198 121 48 1 15 130 12 132 5.00e-42 149
MS.gene003967.t1 AT5G62320 45.833 168 63 3 15 175 13 159 1.48e-41 145
MS.gene003967.t1 AT1G68320 55.856 111 49 0 12 122 16 126 2.25e-41 146
MS.gene003967.t1 AT5G49330 61.905 105 40 0 15 119 12 116 2.86e-41 147
MS.gene003967.t1 AT5G35550 63.208 106 39 0 14 119 13 118 3.71e-41 144
MS.gene003967.t1 AT3G12820 58.716 109 45 0 11 119 10 118 5.63e-41 143
MS.gene003967.t1 AT3G13540 57.143 105 45 0 15 119 23 127 6.15e-41 144
MS.gene003967.t1 AT1G74080 60.952 105 41 0 15 119 12 116 7.43e-41 145
MS.gene003967.t1 AT3G30210 62.037 108 41 0 16 123 28 135 1.95e-40 143
MS.gene003967.t1 AT1G18710 58.095 105 44 0 15 119 12 116 2.25e-40 142
MS.gene003967.t1 AT3G47600 51.079 139 65 2 15 153 12 147 2.73e-40 144
MS.gene003967.t1 AT1G08810 59.048 105 43 0 15 119 12 116 5.25e-40 142
MS.gene003967.t1 AT3G24310 61.321 106 41 0 16 121 19 124 6.07e-40 142
MS.gene003967.t1 AT1G48000 46.405 153 76 2 14 164 31 179 7.44e-40 140
MS.gene003967.t1 AT5G62470 56.481 108 47 0 15 122 12 119 1.35e-39 143
MS.gene003967.t1 AT4G26930 42.857 168 92 1 15 182 19 182 1.80e-39 143
MS.gene003967.t1 AT4G13480 57.658 111 47 0 16 126 7 117 1.98e-39 140
MS.gene003967.t1 AT1G74650 57.798 109 46 0 14 122 11 119 2.17e-39 142
MS.gene003967.t1 AT2G26960 43.293 164 82 2 17 170 22 184 3.15e-39 144
MS.gene003967.t1 AT5G55020 57.547 106 45 0 15 120 26 131 3.23e-39 145
MS.gene003967.t1 AT2G47190 49.600 125 63 0 10 134 15 139 3.28e-39 140
MS.gene003967.t1 AT5G26660 78.481 79 17 0 42 120 8 86 5.40e-39 140
MS.gene003967.t1 AT3G49690 57.143 112 47 1 11 121 8 119 5.82e-39 140
MS.gene003967.t1 AT3G28470 59.223 103 42 0 11 113 8 110 5.96e-39 140
MS.gene003967.t1 AT5G06100 57.547 106 45 0 15 120 32 137 6.30e-39 143
MS.gene003967.t1 AT2G32460 56.604 106 46 0 15 120 18 123 6.34e-39 144
MS.gene003967.t1 AT2G32460 56.604 106 46 0 15 120 6 111 6.97e-39 144
MS.gene003967.t1 AT3G28910 54.464 112 51 0 15 126 12 123 1.35e-38 139
MS.gene003967.t1 AT5G65790 56.250 112 48 1 11 121 8 119 1.41e-38 140
MS.gene003967.t1 AT5G06100 57.547 106 45 0 15 120 32 137 1.89e-38 143
MS.gene003967.t1 AT5G06100 57.547 106 45 0 15 120 32 137 1.89e-38 143
MS.gene003967.t1 AT5G06100 57.547 106 45 0 15 120 32 137 1.89e-38 143
MS.gene003967.t1 AT5G06100 57.547 106 45 0 15 120 32 137 1.89e-38 143
MS.gene003967.t1 AT1G25340 54.206 107 49 0 16 122 19 125 1.96e-38 138
MS.gene003967.t1 AT3G11440 54.630 108 49 0 13 120 39 146 5.00e-38 141
MS.gene003967.t1 AT5G62470 56.481 108 46 1 15 122 12 118 8.44e-38 138
MS.gene003967.t1 AT3G11440 54.630 108 49 0 13 120 39 146 1.72e-37 141
MS.gene003967.t1 AT3G11440 54.630 108 49 0 13 120 39 146 1.72e-37 141
MS.gene003967.t1 AT3G11440 54.630 108 49 0 13 120 39 146 1.72e-37 141
MS.gene003967.t1 AT5G23000 55.556 108 47 1 13 119 10 117 3.66e-37 136
MS.gene003967.t1 AT1G79180 44.937 158 54 1 11 135 10 167 6.92e-37 135
MS.gene003967.t1 AT3G06490 57.407 108 46 0 15 122 19 126 7.58e-37 135
MS.gene003967.t1 AT5G57620 54.545 110 49 1 11 119 8 117 1.40e-36 134
MS.gene003967.t1 AT5G59780 52.212 113 54 0 16 128 9 121 5.67e-36 130
MS.gene003967.t1 AT3G46130 51.327 113 55 0 16 128 10 122 1.12e-35 130
MS.gene003967.t1 AT3G53200 54.128 109 50 0 10 118 4 112 6.23e-35 127
MS.gene003967.t1 AT2G36890 51.818 110 52 1 11 119 8 117 1.87e-34 128
MS.gene003967.t1 AT2G36890 51.818 110 52 1 11 119 49 158 4.14e-34 128
MS.gene003967.t1 AT5G49620 51.786 112 54 0 15 126 26 137 5.14e-34 127
MS.gene003967.t1 AT4G37780 52.830 106 49 1 15 119 12 117 7.39e-34 126
MS.gene003967.t1 AT1G25340 51.402 107 47 1 16 122 19 120 1.58e-33 125
MS.gene003967.t1 AT1G66370 50.909 110 54 0 9 118 2 111 2.15e-33 124
MS.gene003967.t1 AT1G25340 51.402 107 47 1 16 122 19 120 2.98e-33 125
MS.gene003967.t1 AT2G26950 45.378 119 64 1 17 135 18 135 2.65e-32 124
MS.gene003967.t1 AT5G35550 72.727 77 21 0 43 119 45 121 3.48e-32 121
MS.gene003967.t1 AT3G27810 46.617 133 61 2 48 179 4 127 1.32e-31 117
MS.gene003967.t1 AT3G47600 48.819 127 58 3 27 153 22 141 2.88e-31 120
MS.gene003967.t1 AT1G66380 48.819 127 57 1 15 133 8 134 3.46e-31 115
MS.gene003967.t1 AT3G60460 44.898 147 75 3 1 146 1 142 8.37e-31 118
MS.gene003967.t1 AT5G49620 47.541 122 50 1 15 122 26 147 2.12e-30 117
MS.gene003967.t1 AT3G12820 72.464 69 19 0 51 119 2 70 2.21e-30 114
MS.gene003967.t1 AT5G14750 68.116 69 22 0 51 119 18 86 3.53e-30 113
MS.gene003967.t1 AT5G40350 63.514 74 27 0 46 119 3 76 5.54e-30 112
MS.gene003967.t1 AT1G56650 54.808 104 47 0 15 118 8 111 7.23e-30 114
MS.gene003967.t1 AT1G66390 54.808 104 47 0 15 118 8 111 3.63e-29 112
MS.gene003967.t1 AT3G46130 57.317 82 35 0 47 128 9 90 6.37e-29 111
MS.gene003967.t1 AT5G59780 58.025 81 34 0 48 128 20 100 1.07e-28 110
MS.gene003967.t1 AT3G46130 58.025 81 34 0 48 128 20 100 1.43e-28 110
MS.gene003967.t1 AT3G53200 64.789 71 25 0 48 118 9 79 3.49e-27 106
MS.gene003967.t1 AT5G11050 28.899 218 143 3 17 232 105 312 7.01e-27 110
MS.gene003967.t1 AT4G18770 41.135 141 79 3 13 152 213 350 4.05e-26 108
MS.gene003967.t1 AT5G67300 42.063 126 63 2 17 142 6 121 7.82e-26 105
MS.gene003967.t1 AT3G50060 40.625 128 75 1 17 144 6 132 1.33e-25 104
MS.gene003967.t1 AT5G40360 40.678 118 68 2 10 127 151 266 1.56e-25 105
MS.gene003967.t1 AT3G55730 38.922 167 92 4 17 181 56 214 2.09e-25 105
MS.gene003967.t1 AT3G09230 43.284 134 71 2 8 137 46 178 2.11e-25 105
MS.gene003967.t1 AT4G37260 46.789 109 57 1 10 118 6 113 7.09e-25 102
MS.gene003967.t1 AT2G39880 49.107 112 55 2 7 118 41 150 7.48e-25 103
MS.gene003967.t1 AT5G02320 42.623 122 67 2 12 131 62 182 9.51e-25 104
MS.gene003967.t1 AT1G69560 31.250 208 124 5 11 204 101 303 1.00e-24 102
MS.gene003967.t1 AT5G02320 42.623 122 67 2 12 131 122 242 1.09e-24 105
MS.gene003967.t1 AT5G02320 42.623 122 67 2 12 131 122 242 1.09e-24 105
MS.gene003967.t1 AT3G27785 42.857 119 63 3 1 118 175 289 1.18e-24 103
MS.gene003967.t1 AT1G69560 31.250 208 124 5 11 204 117 319 1.32e-24 102
MS.gene003967.t1 AT1G22640 65.714 70 22 1 61 130 1 68 1.49e-24 99.4
MS.gene003967.t1 AT3G09370 45.794 107 57 1 12 118 130 235 6.07e-24 102
MS.gene003967.t1 AT3G09370 45.794 107 57 1 12 118 125 230 6.34e-24 102
MS.gene003967.t1 AT5G58850 40.602 133 73 3 7 134 94 225 7.69e-24 101
MS.gene003967.t1 AT3G09370 45.794 107 57 1 12 118 138 243 8.29e-24 102
MS.gene003967.t1 AT2G23290 47.059 102 53 1 17 118 13 113 1.48e-23 99.0
MS.gene003967.t1 AT3G23250 65.574 61 21 0 61 121 1 61 2.67e-23 96.7
MS.gene003967.t1 AT1G17950 43.925 107 59 1 17 123 5 110 3.64e-23 96.7
MS.gene003967.t1 AT1G26780 44.144 111 59 2 15 124 96 204 5.75e-23 97.1
MS.gene003967.t1 AT1G26780 44.144 111 59 2 15 124 96 204 6.65e-23 98.2
MS.gene003967.t1 AT5G11510 43.519 108 60 1 12 119 76 182 6.82e-23 100
MS.gene003967.t1 AT5G11510 43.519 108 60 1 12 119 76 182 6.82e-23 100
MS.gene003967.t1 AT5G11510 43.519 108 60 1 12 119 76 182 6.82e-23 100
MS.gene003967.t1 AT2G25230 42.991 107 59 2 20 126 29 133 8.39e-23 95.5
MS.gene003967.t1 AT5G11510 43.519 108 60 1 12 119 76 182 9.66e-23 99.8
MS.gene003967.t1 AT5G11510 43.519 108 60 1 12 119 76 182 9.79e-23 99.8
MS.gene003967.t1 AT1G66380 50.526 95 39 1 47 133 7 101 1.08e-22 91.3
MS.gene003967.t1 AT4G32730 41.667 108 62 1 12 119 82 188 6.59e-22 97.4
MS.gene003967.t1 AT4G32730 41.667 108 62 1 12 119 82 188 6.59e-22 97.4
MS.gene003967.t1 AT4G32730 41.667 108 62 1 12 119 82 188 6.59e-22 97.4
MS.gene003967.t1 AT4G32730 41.667 108 62 1 12 119 82 188 6.59e-22 97.4
MS.gene003967.t1 AT4G32730 41.667 108 62 1 12 119 82 188 6.64e-22 97.1
MS.gene003967.t1 AT3G29020 36.719 128 79 2 17 144 65 190 1.33e-21 92.0
MS.gene003967.t1 AT3G29020 36.719 128 79 2 17 144 67 192 2.68e-21 92.8
MS.gene003967.t1 AT5G14750 62.712 59 22 0 61 119 1 59 3.28e-21 88.6
MS.gene003967.t1 AT5G14750 62.712 59 22 0 61 119 1 59 3.28e-21 88.6
MS.gene003967.t1 AT1G73410 43.925 107 59 1 17 123 6 111 3.71e-21 91.3
MS.gene003967.t1 AT5G17800 39.823 113 67 1 8 120 84 195 5.87e-21 92.0
MS.gene003967.t1 AT4G33450 38.393 112 68 1 16 127 18 128 6.94e-21 90.5
MS.gene003967.t1 AT1G73410 43.925 107 59 1 17 123 6 111 1.02e-20 89.0
MS.gene003967.t1 AT1G71030 55.072 69 31 0 54 122 5 73 5.39e-20 86.3
MS.gene003967.t1 AT1G71030 52.632 76 35 1 47 122 13 87 7.93e-20 86.3
MS.gene003967.t1 AT4G00540 41.739 115 61 3 15 125 101 213 5.03e-19 87.4
MS.gene003967.t1 AT1G18960 39.815 108 58 4 17 122 10 112 9.05e-19 85.9
MS.gene003967.t1 AT4G00540 41.739 115 61 3 15 125 99 211 9.06e-19 87.0
MS.gene003967.t1 AT5G40430 37.302 126 74 4 3 126 38 160 1.13e-18 84.7
MS.gene003967.t1 AT2G02820 40.196 102 60 1 20 121 33 133 2.28e-18 85.1
MS.gene003967.t1 AT2G02820 40.196 102 60 1 20 121 33 133 2.65e-18 85.9
MS.gene003967.t1 AT2G02820 40.196 102 60 1 20 121 33 133 3.72e-18 85.5
MS.gene003967.t1 AT1G66380 53.846 78 36 0 15 92 8 85 3.94e-18 79.3
MS.gene003967.t1 AT2G37630 38.017 121 72 2 20 137 7 127 6.26e-17 81.3
MS.gene003967.t1 AT5G39700 33.088 136 84 2 13 148 52 180 3.44e-16 76.3
MS.gene003967.t1 AT1G14350 38.235 102 62 1 20 121 28 128 6.40e-16 78.6
MS.gene003967.t1 AT1G14350 38.235 102 62 1 20 121 28 128 6.40e-16 78.6
MS.gene003967.t1 AT5G59780 50.000 56 28 0 73 128 1 56 6.64e-14 69.3
MS.gene003967.t1 AT3G46130 50.000 56 28 0 73 128 1 56 1.16e-13 68.9
MS.gene003967.t1 AT4G25560 64.706 51 17 1 74 123 3 53 2.99e-13 68.6
MS.gene003967.t1 AT1G74650 64.286 42 15 0 81 122 2 43 7.86e-12 65.1
MS.gene003967.t1 AT5G61420 39.175 97 58 1 84 180 2 97 1.40e-11 64.7
MS.gene003967.t1 AT1G14350 44.444 63 35 0 59 121 23 85 1.71e-11 65.1
MS.gene003967.t1 AT1G14350 44.444 63 35 0 59 121 23 85 1.71e-11 65.1
MS.gene003967.t1 AT3G28910 54.348 46 21 0 81 126 2 47 2.16e-11 63.5

Find 53 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCATTTGCATTCCCTTCT+TGG 0.153405 4.1:+35664111 MS.gene003967:CDS
TGACAGCAAAAGTTTCTATT+TGG 0.177929 4.1:+35666064 MS.gene003967:CDS
CCCATGTTATGGTCTTTGTT+AGG 0.202900 4.1:-35665855 None:intergenic
AATACCATTATGTCTGGTTC+TGG 0.257266 4.1:+35665987 MS.gene003967:CDS
ACAATGAAATCAAGAACTTT+TGG 0.281358 4.1:+35665754 MS.gene003967:CDS
GGGAGTGTAAATATTATTAA+TGG 0.283826 4.1:+35666098 MS.gene003967:CDS
ATTTCATTGTCTGTTCTTCC+AGG 0.287022 4.1:-35665741 None:intergenic
TGCATTCCCTTCTTGGAAAC+AGG 0.336319 4.1:+35664118 MS.gene003967:CDS
GAGATTTATCTGTTGGAGAT+TGG 0.356328 4.1:+35666363 MS.gene003967:CDS
CAAATTGCGGCGCGCTTACC+TGG 0.371371 4.1:+35665723 MS.gene003967:CDS
CCATGTTATGGTCTTTGTTA+GGG 0.387108 4.1:-35665854 None:intergenic
ATCTGTTGGAGATTGGGATT+TGG 0.391051 4.1:+35666370 MS.gene003967:CDS
AGATTTATCTGTTGGAGATT+GGG 0.394773 4.1:+35666364 MS.gene003967:CDS
AATATTATTAATGGTGTAGA+AGG 0.397124 4.1:+35666107 MS.gene003967:CDS
TAAATAGTGGACAAGGTTGT+TGG 0.399936 4.1:+35663965 MS.gene003967:CDS
ATACCATTATGTCTGGTTCT+GGG 0.402889 4.1:+35665988 MS.gene003967:CDS
TTATAAAACCTCCCATGTTA+TGG 0.404725 4.1:-35665866 None:intergenic
GAGGTGGAGAATTTATTTCA+TGG 0.406594 4.1:+35666341 MS.gene003967:CDS
GAGGATTCATCGCTTGCGTT+TGG 0.417571 4.1:-35665825 None:intergenic
ATTATGTCTGGTTCTGGGTG+TGG 0.433859 4.1:+35665993 MS.gene003967:CDS
TTTCATGGAGATTTATCTGT+TGG 0.445436 4.1:+35666356 MS.gene003967:CDS
ATAAGCTTCTCATCTTCCTC+TGG 0.451621 4.1:-35663931 None:intergenic
ACACCCAGAACCAGACATAA+TGG 0.452955 4.1:-35665991 None:intergenic
AACAACTCTAAGCTTAGAAA+AGG 0.456430 4.1:+35663898 MS.gene003967:CDS
AGGAAGCCAGAGATTGCATC+TGG 0.463580 4.1:+35663871 MS.gene003967:CDS
TTCCAAGAAGGGAATGCAAA+TGG 0.481023 4.1:-35664113 None:intergenic
TGGTGTAGAAGGAGATGAGA+TGG 0.483693 4.1:+35666118 MS.gene003967:CDS
ATGAACTACATGTTAAATAG+TGG 0.487097 4.1:+35663952 MS.gene003967:CDS
TTCTTCAATAATAGTACTAC+AGG 0.501923 4.1:+35666017 MS.gene003967:CDS
AGTGATGTTGCTAGAAATGC+TGG 0.514684 4.1:+35663988 MS.gene003967:CDS
AATGCACCACGTTTAAGATC+TGG 0.525169 4.1:-35664063 None:intergenic
AATGCATGCAATGGAGAAGA+TGG 0.536091 4.1:+35666218 MS.gene003967:CDS
TAGAGCTGAAATTGATGAGG+TGG 0.546382 4.1:+35666325 MS.gene003967:CDS
TCAAAGATGGTCTCAAATTG+CGG 0.554550 4.1:+35665710 MS.gene003967:intron
AAGTGGACCTGTTTCCAAGA+AGG 0.565199 4.1:-35664125 None:intergenic
AGTGGACCTGTTTCCAAGAA+GGG 0.574708 4.1:-35664124 None:intergenic
GGAGATGAAGTATTGAACAT+AGG 0.583399 4.1:-35665933 None:intergenic
CTAAGCTTAGAAAAGGATTG+TGG 0.585725 4.1:+35663905 MS.gene003967:CDS
ATGATATGTTCTTCTTCCTG+TGG 0.588188 4.1:-35664090 None:intergenic
CCCTAACAAAGACCATAACA+TGG 0.603188 4.1:+35665854 MS.gene003967:CDS
AATGCTGGATTGCAAAGATG+TGG 0.617901 4.1:+35664003 MS.gene003967:CDS
GTCTTTGTTAGGGTCGTACG+AGG 0.620442 4.1:-35665844 None:intergenic
ACGTGGTGCATTCTCACCAC+AGG 0.629748 4.1:+35664074 MS.gene003967:CDS
TAAGATGGATCAATTACTTG+AGG 0.633708 4.1:+35664040 MS.gene003967:CDS
AAAAGGATTGTGGTCACCAG+AGG 0.635321 4.1:+35663915 MS.gene003967:CDS
AAAATGGAGAATGCATGCAA+TGG 0.638345 4.1:+35666209 MS.gene003967:CDS
TTAGTATTAACACTCTCTAG+AGG 0.641496 4.1:-35666158 None:intergenic
GTATTAACACTCTCTAGAGG+AGG 0.651371 4.1:-35666155 None:intergenic
TACATGTTAAATAGTGGACA+AGG 0.672810 4.1:+35663958 MS.gene003967:CDS
AACAAAGACCATAACATGGG+AGG 0.678788 4.1:+35665858 MS.gene003967:CDS
CCTAACAAAGACCATAACAT+GGG 0.690044 4.1:+35665855 MS.gene003967:CDS
TTGAGGCCAGATCTTAAACG+TGG 0.709043 4.1:+35664057 MS.gene003967:CDS
AAATAGAGCTGAAATTGATG+AGG 0.717144 4.1:+35666322 MS.gene003967:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATAATAATAAAAAA+AGG + chr4.1:35664446-35664465 MS.gene003967:intron 0.0%
!!! ATTTTATAATAATAAAAAAA+GGG + chr4.1:35664447-35664466 MS.gene003967:intron 0.0%
!!! TTCATCATTTTATTAAAAAT+TGG - chr4.1:35664428-35664447 None:intergenic 10.0%
!! TCATAAATTAAAACATGAAA+AGG + chr4.1:35664909-35664928 MS.gene003967:intron 15.0%
!! TTCTCAAATTAAGATAAATT+TGG - chr4.1:35664246-35664265 None:intergenic 15.0%
!!! AATTCTAAAAAATAGTCTAA+AGG - chr4.1:35664523-35664542 None:intergenic 15.0%
!! AAACATGAGTATGTATAATA+TGG + chr4.1:35664371-35664390 MS.gene003967:intron 20.0%
!! AAAGATTATACATGAATAGA+AGG - chr4.1:35665610-35665629 None:intergenic 20.0%
!! AACAACAAATTTAAATCACT+TGG - chr4.1:35665046-35665065 None:intergenic 20.0%
!! AATATTATTAATGGTGTAGA+AGG + chr4.1:35666107-35666126 MS.gene003967:CDS 20.0%
!! ACAACAAATTTAAATCACTT+GGG - chr4.1:35665045-35665064 None:intergenic 20.0%
!! ATACACAACAATATAGTATA+TGG + chr4.1:35664700-35664719 MS.gene003967:intron 20.0%
!! ATATTATACATACTCATGTT+TGG - chr4.1:35664372-35664391 None:intergenic 20.0%
!! GTCTAAAAAATCTAAATCTT+TGG - chr4.1:35664885-35664904 None:intergenic 20.0%
!! TACAATTGAAAACAACATAT+AGG + chr4.1:35665290-35665309 MS.gene003967:intron 20.0%
!! TTCTATATCATAAATGATTC+AGG - chr4.1:35664796-35664815 None:intergenic 20.0%
!! TTTACTGTCTATTTCATAAA+TGG + chr4.1:35665489-35665508 MS.gene003967:intron 20.0%
!!! ATACATAGCTATTTTTTTCA+TGG - chr4.1:35664613-35664632 None:intergenic 20.0%
!!! CATCTTTAAAACATTTTTTG+AGG - chr4.1:35664398-35664417 None:intergenic 20.0%
!!! CTCAAAAAATGTTTTAAAGA+TGG + chr4.1:35664396-35664415 MS.gene003967:intron 20.0%
!!! GATAAATAAATTGATGATCT+AGG - chr4.1:35664161-35664180 None:intergenic 20.0%
!!! TACATAGCTATTTTTTTCAT+GGG - chr4.1:35664612-35664631 None:intergenic 20.0%
! ATGAACTACATGTTAAATAG+TGG + chr4.1:35663952-35663971 MS.gene003967:CDS 25.0%
! CAGTTTGAAAAATCAAGAAA+TGG - chr4.1:35666425-35666444 None:intergenic 25.0%
! CCAAATTTGATTCCATATAT+TGG + chr4.1:35664190-35664209 MS.gene003967:intron 25.0%
! CCAATATATGGAATCAAATT+TGG - chr4.1:35664193-35664212 None:intergenic 25.0%
! GATAACTTGAGAGAAAAAAA+TGG - chr4.1:35664559-35664578 None:intergenic 25.0%
! TAAATTAAGGAGCCAATATA+TGG - chr4.1:35664205-35664224 None:intergenic 25.0%
! TAACTAAATAGTATTACGAG+AGG + chr4.1:35665539-35665558 MS.gene003967:intron 25.0%
! TTCTTCAATAATAGTACTAC+AGG + chr4.1:35666017-35666036 MS.gene003967:CDS 25.0%
! TTGTGAACATAGTGTAAAAA+TGG + chr4.1:35666193-35666212 MS.gene003967:CDS 25.0%
!! ACAATGAAATCAAGAACTTT+TGG + chr4.1:35665754-35665773 MS.gene003967:CDS 25.0%
!! GGGAGTGTAAATATTATTAA+TGG + chr4.1:35666098-35666117 MS.gene003967:CDS 25.0%
!!! GAAGATAACCATTTTTACAT+TGG + chr4.1:35664263-35664282 MS.gene003967:intron 25.0%
!!! TCTATTTGGAAAAAGTGTTT+GGG + chr4.1:35666078-35666097 MS.gene003967:CDS 25.0%
!!! TTCTATTTGGAAAAAGTGTT+TGG + chr4.1:35666077-35666096 MS.gene003967:CDS 25.0%
AAAGATGTGGAAAAAGTTGT+AGG + chr4.1:35664016-35664035 MS.gene003967:CDS 30.0%
AAATAGAGCTGAAATTGATG+AGG + chr4.1:35666322-35666341 MS.gene003967:CDS 30.0%
AAATTGTCTGTCTCTCTAAA+TGG - chr4.1:35665106-35665125 None:intergenic 30.0%
AACAACTCTAAGCTTAGAAA+AGG + chr4.1:35663898-35663917 MS.gene003967:CDS 30.0%
AATTAGTTGTGTCGTATCTT+AGG - chr4.1:35665173-35665192 None:intergenic 30.0%
ACTGTGATTTCGTCTTTATT+TGG + chr4.1:35665314-35665333 MS.gene003967:intron 30.0%
AGATTTATCTGTTGGAGATT+GGG + chr4.1:35666364-35666383 MS.gene003967:CDS 30.0%
ATAGTATTACGAGAGGAAAT+AGG + chr4.1:35665546-35665565 MS.gene003967:intron 30.0%
CTCCTTAATTCACTATTTAG+TGG + chr4.1:35664286-35664305 MS.gene003967:intron 30.0%
GTCCACTAAATAGTGAATTA+AGG - chr4.1:35664291-35664310 None:intergenic 30.0%
TAAGATGGATCAATTACTTG+AGG + chr4.1:35664040-35664059 MS.gene003967:CDS 30.0%
TGACAGCAAAAGTTTCTATT+TGG + chr4.1:35666064-35666083 MS.gene003967:CDS 30.0%
TTAAGGAGCCAATGTAAAAA+TGG - chr4.1:35664274-35664293 None:intergenic 30.0%
TTAGTATTAACACTCTCTAG+AGG - chr4.1:35666161-35666180 None:intergenic 30.0%
TTATAAAACCTCCCATGTTA+TGG - chr4.1:35665869-35665888 None:intergenic 30.0%
TTTCATGGAGATTTATCTGT+TGG + chr4.1:35666356-35666375 MS.gene003967:CDS 30.0%
TTTGAACAATACACGTAGTA+TGG - chr4.1:35665359-35665378 None:intergenic 30.0%
! AAAACTGTGTTTTGCATTGT+TGG - chr4.1:35665966-35665985 None:intergenic 30.0%
! GAGACAGACAATTTTGTAAA+AGG + chr4.1:35665112-35665131 MS.gene003967:intron 30.0%
! GTTTTCAATACCATTATGTC+TGG + chr4.1:35665981-35666000 MS.gene003967:CDS 30.0%
! TTGTACTTTTGTCTTCTACA+AGG - chr4.1:35665275-35665294 None:intergenic 30.0%
! TTGTGCTTCATTTTCAAAGA+TGG + chr4.1:35665697-35665716 MS.gene003967:intron 30.0%
!! TACATGTTAAATAGTGGACA+AGG + chr4.1:35663958-35663977 MS.gene003967:CDS 30.0%
!!! ATTTTGAAACAGTTGTGCTA+TGG + chr4.1:35664633-35664652 MS.gene003967:intron 30.0%
AAAATGGAGAATGCATGCAA+TGG + chr4.1:35666209-35666228 MS.gene003967:CDS 35.0%
ATAGATTTCACCTCTTGATG+TGG - chr4.1:35664586-35664605 None:intergenic 35.0%
ATCTAGGTAGAAAAGTGAAG+TGG - chr4.1:35664145-35664164 None:intergenic 35.0%
ATGATATGTTCTTCTTCCTG+TGG - chr4.1:35664093-35664112 None:intergenic 35.0%
ATTCAGGAACACAATGATTC+AGG - chr4.1:35664780-35664799 None:intergenic 35.0%
ATTTCATTGTCTGTTCTTCC+AGG - chr4.1:35665744-35665763 None:intergenic 35.0%
CCATGTTATGGTCTTTGTTA+GGG - chr4.1:35665857-35665876 None:intergenic 35.0%
CCTAACAAAGACCATAACAT+GGG + chr4.1:35665855-35665874 MS.gene003967:CDS 35.0%
CTAAGCTTAGAAAAGGATTG+TGG + chr4.1:35663905-35663924 MS.gene003967:CDS 35.0%
GAAAAAGTTGTAGGCTAAGA+TGG + chr4.1:35664025-35664044 MS.gene003967:CDS 35.0%
GAGATTTATCTGTTGGAGAT+TGG + chr4.1:35666363-35666382 MS.gene003967:CDS 35.0%
GAGGTGGAGAATTTATTTCA+TGG + chr4.1:35666341-35666360 MS.gene003967:CDS 35.0%
TAGATTTCACCTCTTGATGT+GGG - chr4.1:35664585-35664604 None:intergenic 35.0%
TCAAAGATGGTCTCAAATTG+CGG + chr4.1:35665710-35665729 MS.gene003967:intron 35.0%
! AATACCATTATGTCTGGTTC+TGG + chr4.1:35665987-35666006 MS.gene003967:CDS 35.0%
!! ATACCATTATGTCTGGTTCT+GGG + chr4.1:35665988-35666007 MS.gene003967:CDS 35.0%
!! GGAGATGAAGTATTGAACAT+AGG - chr4.1:35665936-35665955 None:intergenic 35.0%
!! TAAATAGTGGACAAGGTTGT+TGG + chr4.1:35663965-35663984 MS.gene003967:CDS 35.0%
!!! TTTTTTCCAGATGCAATCTC+TGG - chr4.1:35663880-35663899 None:intergenic 35.0%
AACAAAGACCATAACATGGG+AGG + chr4.1:35665858-35665877 MS.gene003967:CDS 40.0%
AATGCATGCAATGGAGAAGA+TGG + chr4.1:35666218-35666237 MS.gene003967:CDS 40.0%
AATGCTGGATTGCAAAGATG+TGG + chr4.1:35664003-35664022 MS.gene003967:CDS 40.0%
ACGAGAGGAAATAGGTCTAA+AGG + chr4.1:35665554-35665573 MS.gene003967:intron 40.0%
AGTGATGTTGCTAGAAATGC+TGG + chr4.1:35663988-35664007 MS.gene003967:CDS 40.0%
ATAAGCTTCTCATCTTCCTC+TGG - chr4.1:35663934-35663953 None:intergenic 40.0%
ATCCATTTGCATTCCCTTCT+TGG + chr4.1:35664111-35664130 MS.gene003967:CDS 40.0%
ATCTGTTGGAGATTGGGATT+TGG + chr4.1:35666370-35666389 MS.gene003967:CDS 40.0%
CCCATGTTATGGTCTTTGTT+AGG - chr4.1:35665858-35665877 None:intergenic 40.0%
CCCTAACAAAGACCATAACA+TGG + chr4.1:35665854-35665873 MS.gene003967:CDS 40.0%
TAAGCAGATCAAGACTTGTG+TGG + chr4.1:35664853-35664872 MS.gene003967:intron 40.0%
TAGAGCTGAAATTGATGAGG+TGG + chr4.1:35666325-35666344 MS.gene003967:CDS 40.0%
TTCCAAGAAGGGAATGCAAA+TGG - chr4.1:35664116-35664135 None:intergenic 40.0%
! AATGCACCACGTTTAAGATC+TGG - chr4.1:35664066-35664085 None:intergenic 40.0%
! ACTGTGTTTTGCATTGTTGG+TGG - chr4.1:35665963-35665982 None:intergenic 40.0%
! GTATTAACACTCTCTAGAGG+AGG - chr4.1:35666158-35666177 None:intergenic 40.0%
! TTGTGTCGTATCTTAGGTTG+AGG - chr4.1:35665167-35665186 None:intergenic 40.0%
!!! TTTTGCATTGTTGGTGGTGA+TGG - chr4.1:35665957-35665976 None:intergenic 40.0%
AAAAGGATTGTGGTCACCAG+AGG + chr4.1:35663915-35663934 MS.gene003967:CDS 45.0%
AAGTGGACCTGTTTCCAAGA+AGG - chr4.1:35664128-35664147 None:intergenic 45.0%
ACACCCAGAACCAGACATAA+TGG - chr4.1:35665994-35666013 None:intergenic 45.0%
AGTGGACCTGTTTCCAAGAA+GGG - chr4.1:35664127-35664146 None:intergenic 45.0%
ATAGGTCTAAAGGCCTCTAG+CGG + chr4.1:35665564-35665583 MS.gene003967:intron 45.0%
GTTATCTCACCCACATCAAG+AGG + chr4.1:35664573-35664592 MS.gene003967:intron 45.0%
TGCATTCCCTTCTTGGAAAC+AGG + chr4.1:35664118-35664137 MS.gene003967:CDS 45.0%
TGGTGTAGAAGGAGATGAGA+TGG + chr4.1:35666118-35666137 MS.gene003967:CDS 45.0%
TTGAGGCCAGATCTTAAACG+TGG + chr4.1:35664057-35664076 MS.gene003967:CDS 45.0%
!! ATTATGTCTGGTTCTGGGTG+TGG + chr4.1:35665993-35666012 MS.gene003967:CDS 45.0%
!! TGTCGTATCTTAGGTTGAGG+AGG - chr4.1:35665164-35665183 None:intergenic 45.0%
!! ATAATATGATAAATAAATTA+AGG - chr4.1:35664218-35664237 None:intergenic 5.0%
AGGAAGCCAGAGATTGCATC+TGG + chr4.1:35663871-35663890 MS.gene003967:CDS 50.0%
CTGACAGCGTGTTTGACATC+AGG + chr4.1:35664669-35664688 MS.gene003967:intron 50.0%
CTGATGTCAAACACGCTGTC+AGG - chr4.1:35664671-35664690 None:intergenic 50.0%
GAGGATTCATCGCTTGCGTT+TGG - chr4.1:35665828-35665847 None:intergenic 50.0%
GTCTTTGTTAGGGTCGTACG+AGG - chr4.1:35665847-35665866 None:intergenic 50.0%
! ACAACAAACTGTGCCGCTAG+AGG - chr4.1:35665580-35665599 None:intergenic 50.0%
ACGTGGTGCATTCTCACCAC+AGG + chr4.1:35664074-35664093 MS.gene003967:CDS 55.0%
CAAATTGCGGCGCGCTTACC+TGG + chr4.1:35665723-35665742 MS.gene003967:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 35663868 35666445 35663868 ID=MS.gene003967
chr4.1 mRNA 35663868 35666445 35663868 ID=MS.gene003967.t1;Parent=MS.gene003967
chr4.1 exon 35663868 35664139 35663868 ID=MS.gene003967.t1.exon1;Parent=MS.gene003967.t1
chr4.1 CDS 35663868 35664139 35663868 ID=cds.MS.gene003967.t1;Parent=MS.gene003967.t1
chr4.1 exon 35665716 35666445 35665716 ID=MS.gene003967.t1.exon2;Parent=MS.gene003967.t1
chr4.1 CDS 35665716 35666445 35665716 ID=cds.MS.gene003967.t1;Parent=MS.gene003967.t1
Gene Sequence

>MS.gene003967

ATGAGGAAGCCAGAGATTGCATCTGGAAAAAACAACTCTAAGCTTAGAAAAGGATTGTGGTCACCAGAGGAAGATGAGAAGCTTATGAACTACATGTTAAATAGTGGACAAGGTTGTTGGAGTGATGTTGCTAGAAATGCTGGATTGCAAAGATGTGGAAAAAGTTGTAGGCTAAGATGGATCAATTACTTGAGGCCAGATCTTAAACGTGGTGCATTCTCACCACAGGAAGAAGAACATATCATCCATTTGCATTCCCTTCTTGGAAACAGGTCCACTTCACTTTTCTACCTAGATCATCAATTTATTTATCTTATTAGTACCAAATTTGATTCCATATATTGGCTCCTTAATTTATTTATCATATTATTAGTACCAAATTTATCTTAATTTGAGAAGATAACCATTTTTACATTGGCTCCTTAATTCACTATTTAGTGGACATAAAGAGATTTCAACTGTGAACTAATAATTAATATATTACATATATATTTGTATGCACCAAACATGAGTATGTATAATATGGACCTCAAAAAATGTTTTAAAGATGGACTTGACCAATTTTTAATAAAATGATGAATTTTATAATAATAAAAAAAGGGAAGAGATGTAGTATTTCATTACAATTTATTTAAAAAAATGTAAATATTCACCTTTAGACTATTTTTTAGAATTTATATTTGATACACCATTTTTTTCTCTCAAGTTATCTCACCCACATCAAGAGGTGAAATCTATATTCCCATGAAAAAAATAGCTATGTATATTTTGAAACAGTTGTGCTATGGAAACATAGATTTCCTGACAGCGTGTTTGACATCAGGTCAAATGTATACACAACAATATAGTATATGGTGTCATGTTGTGCAAAATTGTTTCTAAAAAAAATGTTGTAAAAAAAATTGTGTTCCTGAATCATTGTGTTCCTGAATCATTTATGATATAGAAAACATAGAATTATCACAAAAAGTCAATAGATACATCATAAGCAGATCAAGACTTGTGTGGTCACAACCAAAGATTTAGATTTTTTAGACAAACTCATAAATTAAAACATGAAAAGGAGAAAAAAAAGCAATTATATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGATTGAATTAATTAATGTGCATTTGTGTTGTGTGTGCACCCAAGTGATTTAAATTTGTTGTTGTGATCATGCAAATTATTCTCATAAGCAATAGTGCTTCCATTTAGAGAGACAGACAATTTTGTAAAAGGAAGTCTTTTTGCGTCAAAATTTAAGTCCTCCTCAACCTAAGATACGACACAACTAATTCAAAGTTAAAAAATACATGCACAACATGCATCAAATATAATAATATTATTATTAATATATGTATATGATCAAGACAGCTCCTTGTAGAAGACAAAAGTACAATTGAAAACAACATATAGGCACTGTGATTTCGTCTTTATTTGGACTTCGAGTTGAAGACACTCCATACTACGTGTATTGTTCAAAAAAGACTAATTAACTTTCATGCAAAGCATGCATTCAATTTCAGTTTTAAAAAATTGACAGAAATTAATTAATAAACATATATGTAGTCATATATACTCAAGACAACTCTATTTACTGTCTATTTCATAAATGGTATTTTTTTTTTATAAACAAAATTTATTAACTAAATAGTATTACGAGAGGAAATAGGTCTAAAGGCCTCTAGCGGCACAGTTTGTTGTTTGTTTGCCTTCTATTCATGTATAATCTTTGCTATTTTAAAAAGAAAATTATTTTTGTGCTATATATATTTATGAATTATTAAGCAAACATATTAAATTGTGCTTCATTTTCAAAGATGGTCTCAAATTGCGGCGCGCTTACCTGGAAGAACAGACAATGAAATCAAGAACTTTTGGAATTCAACAATAAAGAAAAGACTCAAGAACATGTCGTCGAACACTTCACCAAACGCAAGCGATGAATCCTCGTACGACCCTAACAAAGACCATAACATGGGAGGTTTTATAACTTCTTCAACACAAGATCAACAACATATTGATAATCATTTTATGCCTATGTTCAATACTTCATCTCCATCACCACCAACAATGCAAAACACAGTTTTCAATACCATTATGTCTGGTTCTGGGTGTGGATTCTTCAATAATAGTACTACAGGAACATACTTGTCACAGAATAATCATGACAGCAAAAGTTTCTATTTGGAAAAAGTGTTTGGGAGTGTAAATATTATTAATGGTGTAGAAGGAGATGAGATGGAAATTTACAATGTTCCTCCTCTAGAGAGTGTTAATACTAATAGTACTATTACTTGTGAACATAGTGTAAAAATGGAGAATGCATGCAATGGAGAAGATGGTAATTACAATAGTAGTTATAACTTTGATGACATAAACAACATTGTTATTAACAACTGCAATGTTGTTAGTAAGAGAAGTGAAAATAGAGCTGAAATTGATGAGGTGGAGAATTTATTTCATGGAGATTTATCTGTTGGAGATTGGGATTTGGAAGATTTGATGAAAGATGTTTCATCATTTCCATTTCTTGATTTTTCAAACTGA
Protein sequence

>MS.gene003967.t1

MRKPEIASGKNNSKLRKGLWSPEEDEKLMNYMLNSGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEEHIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNMSSNTSPNASDESSYDPNKDHNMGGFITSSTQDQQHIDNHFMPMFNTSSPSPPTMQNTVFNTIMSGSGCGFFNNSTTGTYLSQNNHDSKSFYLEKVFGSVNIINGVEGDEMEIYNVPPLESVNTNSTITCEHSVKMENACNGEDGNYNSSYNFDDINNIVINNCNVVSKRSENRAEIDEVENLFHGDLSVGDWDLEDLMKDVSSFPFLDFSN