Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004024.t1 | XP_003606667.1 | 93.3 | 628 | 42 | 0 | 1 | 628 | 1 | 628 | 0.00E+00 | 1167.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004024.t1 | Q9XE58 | 45.7 | 692 | 277 | 17 | 31 | 628 | 81 | 767 | 8.4e-151 | 535.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004024.t1 | G7JUT4 | 93.3 | 628 | 42 | 0 | 1 | 628 | 1 | 628 | 0.0e+00 | 1167.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene004024.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004024.t1 | MTR_4g064120 | 94.268 | 628 | 36 | 0 | 1 | 628 | 1 | 628 | 0.0 | 1216 |
MS.gene004024.t1 | MTR_4g064180 | 93.631 | 628 | 40 | 0 | 1 | 628 | 1 | 628 | 0.0 | 1207 |
MS.gene004024.t1 | MTR_4g064150 | 71.235 | 664 | 141 | 8 | 14 | 628 | 73 | 735 | 0.0 | 931 |
MS.gene004024.t1 | MTR_2g097410 | 54.883 | 727 | 218 | 12 | 2 | 628 | 27 | 743 | 0.0 | 763 |
MS.gene004024.t1 | MTR_4g064160 | 49.031 | 671 | 266 | 14 | 24 | 628 | 26 | 686 | 0.0 | 597 |
MS.gene004024.t1 | MTR_7g062120 | 44.152 | 684 | 294 | 17 | 26 | 628 | 66 | 742 | 0.0 | 540 |
MS.gene004024.t1 | MTR_2g097467 | 45.687 | 626 | 302 | 17 | 27 | 628 | 45 | 656 | 4.13e-171 | 503 |
MS.gene004024.t1 | MTR_2g097473 | 45.104 | 623 | 310 | 12 | 27 | 628 | 45 | 656 | 2.49e-170 | 500 |
MS.gene004024.t1 | MTR_2g097463 | 44.182 | 636 | 279 | 16 | 36 | 628 | 55 | 657 | 5.31e-167 | 492 |
MS.gene004024.t1 | MTR_4g064200 | 50.520 | 481 | 209 | 7 | 169 | 628 | 180 | 652 | 1.11e-164 | 486 |
MS.gene004024.t1 | MTR_2g097310 | 49.251 | 467 | 214 | 9 | 174 | 628 | 185 | 640 | 4.52e-153 | 456 |
MS.gene004024.t1 | MTR_2g097390 | 42.147 | 624 | 302 | 17 | 33 | 628 | 51 | 643 | 1.23e-152 | 454 |
MS.gene004024.t1 | MTR_2g097350 | 47.732 | 463 | 226 | 7 | 174 | 628 | 188 | 642 | 3.20e-148 | 443 |
MS.gene004024.t1 | MTR_2g097380 | 46.171 | 444 | 175 | 8 | 195 | 628 | 174 | 563 | 3.58e-129 | 392 |
MS.gene004024.t1 | MTR_2g082090 | 29.741 | 501 | 339 | 5 | 133 | 625 | 83 | 578 | 9.24e-70 | 237 |
MS.gene004024.t1 | MTR_3g056110 | 32.979 | 376 | 247 | 3 | 250 | 625 | 171 | 541 | 1.99e-63 | 219 |
MS.gene004024.t1 | MTR_5g097480 | 32.713 | 376 | 248 | 3 | 250 | 625 | 173 | 543 | 3.80e-63 | 218 |
MS.gene004024.t1 | MTR_4g133660 | 31.842 | 380 | 251 | 6 | 249 | 626 | 170 | 543 | 2.96e-62 | 216 |
MS.gene004024.t1 | MTR_7g027190 | 32.000 | 400 | 235 | 5 | 245 | 625 | 291 | 672 | 6.84e-60 | 212 |
MS.gene004024.t1 | MTR_5g094450 | 32.368 | 380 | 248 | 7 | 250 | 625 | 157 | 531 | 1.02e-58 | 206 |
MS.gene004024.t1 | MTR_1g029420 | 30.214 | 374 | 256 | 3 | 252 | 625 | 223 | 591 | 4.94e-58 | 205 |
MS.gene004024.t1 | MTR_2g026250 | 28.836 | 378 | 263 | 4 | 249 | 625 | 223 | 595 | 1.07e-55 | 199 |
MS.gene004024.t1 | MTR_3g089055 | 29.412 | 374 | 259 | 3 | 252 | 625 | 196 | 564 | 3.96e-55 | 197 |
MS.gene004024.t1 | MTR_3g089055 | 29.412 | 374 | 259 | 3 | 252 | 625 | 201 | 569 | 4.16e-55 | 197 |
MS.gene004024.t1 | MTR_3g065980 | 31.387 | 411 | 250 | 8 | 229 | 625 | 147 | 539 | 2.01e-54 | 194 |
MS.gene004024.t1 | MTR_8g442410 | 30.822 | 438 | 270 | 11 | 205 | 628 | 109 | 527 | 3.00e-54 | 194 |
MS.gene004024.t1 | MTR_4g104020 | 30.256 | 390 | 241 | 8 | 251 | 625 | 146 | 519 | 3.16e-54 | 193 |
MS.gene004024.t1 | MTR_7g074650 | 30.458 | 371 | 238 | 7 | 258 | 627 | 442 | 793 | 5.47e-50 | 186 |
MS.gene004024.t1 | MTR_5g009080 | 26.517 | 445 | 259 | 6 | 240 | 625 | 42 | 477 | 9.99e-49 | 177 |
MS.gene004024.t1 | MTR_4g076140 | 26.477 | 457 | 267 | 6 | 229 | 625 | 21 | 468 | 1.62e-48 | 176 |
MS.gene004024.t1 | MTR_3g022830 | 25.891 | 421 | 251 | 8 | 255 | 625 | 26 | 435 | 1.10e-41 | 157 |
MS.gene004024.t1 | MTR_4g102790 | 27.735 | 393 | 260 | 10 | 246 | 627 | 284 | 663 | 6.56e-41 | 158 |
MS.gene004024.t1 | MTR_4g097080 | 27.865 | 384 | 259 | 8 | 252 | 627 | 131 | 504 | 2.52e-39 | 151 |
MS.gene004024.t1 | MTR_2g034260 | 27.848 | 395 | 263 | 9 | 243 | 625 | 199 | 583 | 1.48e-38 | 150 |
MS.gene004024.t1 | MTR_4g076020 | 27.224 | 371 | 243 | 6 | 258 | 628 | 88 | 431 | 2.16e-38 | 147 |
MS.gene004024.t1 | MTR_2g089100 | 27.027 | 407 | 258 | 9 | 251 | 628 | 49 | 445 | 2.20e-38 | 148 |
MS.gene004024.t1 | MTR_2g034250 | 27.848 | 395 | 264 | 8 | 243 | 625 | 199 | 584 | 3.23e-37 | 147 |
MS.gene004024.t1 | MTR_1g069725 | 26.357 | 387 | 253 | 11 | 246 | 625 | 101 | 462 | 7.90e-37 | 144 |
MS.gene004024.t1 | MTR_1g096030 | 29.500 | 400 | 239 | 13 | 251 | 625 | 77 | 458 | 2.36e-35 | 139 |
MS.gene004024.t1 | MTR_5g015490 | 27.083 | 384 | 266 | 8 | 253 | 627 | 113 | 491 | 2.64e-34 | 137 |
MS.gene004024.t1 | MTR_4g077760 | 26.966 | 356 | 242 | 8 | 274 | 625 | 213 | 554 | 6.05e-32 | 130 |
MS.gene004024.t1 | MTR_7g057230 | 27.532 | 316 | 215 | 6 | 317 | 626 | 350 | 657 | 8.14e-32 | 131 |
MS.gene004024.t1 | MTR_2g034280 | 26.142 | 394 | 269 | 11 | 243 | 625 | 192 | 574 | 5.66e-31 | 128 |
MS.gene004024.t1 | MTR_5g015950 | 22.877 | 424 | 274 | 10 | 251 | 628 | 32 | 448 | 1.77e-28 | 119 |
MS.gene004024.t1 | MTR_3g053270 | 22.877 | 424 | 274 | 10 | 251 | 628 | 32 | 448 | 1.77e-28 | 119 |
MS.gene004024.t1 | MTR_3g072710 | 24.634 | 410 | 277 | 10 | 237 | 626 | 103 | 500 | 2.59e-28 | 119 |
MS.gene004024.t1 | MTR_7g109580 | 24.615 | 390 | 273 | 8 | 243 | 625 | 178 | 553 | 1.65e-27 | 117 |
MS.gene004024.t1 | MTR_5g058860 | 25.298 | 419 | 270 | 11 | 232 | 626 | 98 | 497 | 2.40e-27 | 116 |
MS.gene004024.t1 | MTR_1g086970 | 24.190 | 401 | 268 | 11 | 243 | 625 | 95 | 477 | 2.43e-26 | 113 |
MS.gene004024.t1 | MTR_4g095500 | 23.990 | 421 | 271 | 11 | 251 | 628 | 56 | 470 | 3.44e-26 | 112 |
MS.gene004024.t1 | MTR_2g099110 | 26.284 | 331 | 224 | 7 | 226 | 552 | 50 | 364 | 1.52e-25 | 110 |
MS.gene004024.t1 | MTR_8g093070 | 25.189 | 397 | 244 | 17 | 251 | 628 | 136 | 498 | 3.14e-21 | 97.8 |
MS.gene004024.t1 | MTR_0092s0100 | 22.252 | 373 | 270 | 7 | 255 | 625 | 376 | 730 | 6.12e-17 | 85.1 |
MS.gene004024.t1 | MTR_0092s0100 | 22.252 | 373 | 270 | 7 | 255 | 625 | 373 | 727 | 7.20e-17 | 85.1 |
MS.gene004024.t1 | MTR_4g026485 | 22.606 | 376 | 264 | 9 | 255 | 625 | 270 | 623 | 1.29e-14 | 77.8 |
MS.gene004024.t1 | MTR_8g020840 | 24.752 | 404 | 245 | 16 | 254 | 625 | 171 | 547 | 4.30e-14 | 75.9 |
MS.gene004024.t1 | MTR_3g022580 | 30.496 | 141 | 91 | 4 | 486 | 625 | 48 | 182 | 3.60e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004024.t1 | AT1G07530 | 45.428 | 689 | 274 | 15 | 35 | 628 | 86 | 767 | 0.0 | 569 |
MS.gene004024.t1 | AT2G29060 | 48.320 | 625 | 276 | 16 | 29 | 627 | 53 | 656 | 0.0 | 556 |
MS.gene004024.t1 | AT2G29060 | 46.605 | 648 | 290 | 14 | 29 | 627 | 53 | 693 | 0.0 | 548 |
MS.gene004024.t1 | AT2G29065 | 46.687 | 664 | 284 | 16 | 1 | 628 | 1 | 630 | 0.0 | 539 |
MS.gene004024.t1 | AT1G07520 | 46.384 | 636 | 288 | 12 | 36 | 628 | 71 | 696 | 8.92e-179 | 523 |
MS.gene004024.t1 | AT1G07520 | 46.384 | 636 | 288 | 12 | 36 | 628 | 70 | 695 | 9.85e-179 | 523 |
MS.gene004024.t1 | AT1G07520 | 49.813 | 536 | 230 | 9 | 124 | 628 | 4 | 531 | 2.31e-176 | 511 |
MS.gene004024.t1 | AT1G07520 | 49.813 | 536 | 230 | 9 | 124 | 628 | 4 | 531 | 2.31e-176 | 511 |
MS.gene004024.t1 | AT2G37650 | 41.718 | 652 | 318 | 17 | 28 | 627 | 73 | 714 | 6.00e-159 | 473 |
MS.gene004024.t1 | AT2G37650 | 41.718 | 652 | 318 | 17 | 28 | 627 | 61 | 702 | 1.28e-158 | 472 |
MS.gene004024.t1 | AT3G46600 | 47.846 | 441 | 221 | 4 | 190 | 628 | 116 | 549 | 5.60e-146 | 434 |
MS.gene004024.t1 | AT3G46600 | 47.846 | 441 | 221 | 4 | 190 | 628 | 148 | 581 | 6.63e-146 | 435 |
MS.gene004024.t1 | AT5G59450 | 45.788 | 463 | 232 | 7 | 180 | 628 | 143 | 600 | 4.55e-144 | 432 |
MS.gene004024.t1 | AT3G46600 | 50.529 | 378 | 182 | 2 | 251 | 628 | 1 | 373 | 1.92e-138 | 409 |
MS.gene004024.t1 | AT1G50600 | 32.713 | 376 | 248 | 3 | 250 | 625 | 155 | 525 | 1.38e-61 | 214 |
MS.gene004024.t1 | AT5G48150 | 31.383 | 376 | 254 | 3 | 250 | 625 | 118 | 489 | 1.41e-61 | 213 |
MS.gene004024.t1 | AT5G48150 | 31.383 | 376 | 254 | 3 | 250 | 625 | 118 | 489 | 1.41e-61 | 213 |
MS.gene004024.t1 | AT5G48150 | 31.383 | 376 | 254 | 3 | 250 | 625 | 118 | 489 | 1.41e-61 | 213 |
MS.gene004024.t1 | AT5G48150 | 31.383 | 376 | 254 | 3 | 250 | 625 | 118 | 489 | 1.41e-61 | 213 |
MS.gene004024.t1 | AT1G50600 | 32.713 | 376 | 248 | 3 | 250 | 625 | 226 | 596 | 4.70e-61 | 214 |
MS.gene004024.t1 | AT1G50600 | 32.713 | 376 | 248 | 3 | 250 | 625 | 230 | 600 | 5.07e-61 | 214 |
MS.gene004024.t1 | AT2G04890 | 32.447 | 376 | 242 | 4 | 250 | 625 | 49 | 412 | 1.65e-60 | 207 |
MS.gene004024.t1 | AT1G21450 | 31.565 | 377 | 248 | 5 | 252 | 625 | 223 | 592 | 9.89e-57 | 202 |
MS.gene004024.t1 | AT1G66350 | 32.383 | 386 | 234 | 8 | 243 | 625 | 144 | 505 | 1.70e-56 | 199 |
MS.gene004024.t1 | AT4G17230 | 31.398 | 379 | 255 | 3 | 249 | 627 | 153 | 526 | 2.36e-53 | 191 |
MS.gene004024.t1 | AT4G17230 | 31.398 | 379 | 255 | 3 | 249 | 627 | 153 | 526 | 2.36e-53 | 191 |
MS.gene004024.t1 | AT1G14920 | 31.008 | 387 | 244 | 9 | 243 | 625 | 161 | 528 | 4.81e-51 | 185 |
MS.gene004024.t1 | AT3G03450 | 29.534 | 386 | 256 | 7 | 243 | 625 | 172 | 544 | 3.81e-50 | 183 |
MS.gene004024.t1 | AT3G54220 | 29.380 | 371 | 245 | 6 | 258 | 627 | 297 | 651 | 1.52e-49 | 183 |
MS.gene004024.t1 | AT2G01570 | 29.974 | 387 | 248 | 9 | 243 | 625 | 213 | 580 | 3.52e-49 | 181 |
MS.gene004024.t1 | AT1G50420 | 25.688 | 436 | 260 | 5 | 247 | 625 | 50 | 478 | 6.40e-49 | 178 |
MS.gene004024.t1 | AT5G17490 | 28.198 | 383 | 247 | 9 | 249 | 625 | 155 | 515 | 1.39e-44 | 167 |
MS.gene004024.t1 | AT5G66770 | 28.321 | 399 | 264 | 9 | 236 | 625 | 198 | 583 | 2.95e-43 | 164 |
MS.gene004024.t1 | AT5G41920 | 25.728 | 412 | 283 | 7 | 219 | 625 | 6 | 399 | 4.36e-39 | 149 |
MS.gene004024.t1 | AT4G37650 | 25.831 | 391 | 269 | 9 | 253 | 627 | 145 | 530 | 1.13e-36 | 144 |
MS.gene004024.t1 | AT1G63100 | 29.745 | 353 | 234 | 7 | 247 | 596 | 245 | 586 | 3.51e-36 | 144 |
MS.gene004024.t1 | AT1G63100 | 29.745 | 353 | 234 | 7 | 247 | 596 | 270 | 611 | 3.51e-36 | 144 |
MS.gene004024.t1 | AT5G52510 | 24.742 | 388 | 264 | 7 | 252 | 625 | 266 | 639 | 4.50e-35 | 141 |
MS.gene004024.t1 | AT3G50650 | 26.810 | 373 | 248 | 8 | 263 | 625 | 184 | 541 | 9.07e-33 | 133 |
MS.gene004024.t1 | AT3G49950 | 27.665 | 394 | 257 | 12 | 251 | 627 | 27 | 409 | 7.31e-29 | 119 |
MS.gene004024.t1 | AT1G55580 | 25.776 | 419 | 252 | 10 | 251 | 625 | 41 | 444 | 1.69e-28 | 119 |
MS.gene004024.t1 | AT4G08250 | 27.654 | 405 | 253 | 18 | 239 | 625 | 94 | 476 | 1.20e-24 | 108 |
MS.gene004024.t1 | AT3G13840 | 23.448 | 435 | 264 | 17 | 222 | 625 | 113 | 509 | 5.65e-15 | 78.6 |
MS.gene004024.t1 | AT5G67411 | 33.824 | 204 | 115 | 10 | 373 | 562 | 1 | 198 | 4.01e-14 | 72.0 |
Find 141 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTCTTCATCATATTGAAAT+TGG | 0.107646 | 4.3:-39605878 | None:intergenic |
TTCGCTCTGTCTATTATTAA+TGG | 0.122836 | 4.3:+39606828 | MS.gene004024:CDS |
ACCCTTCATATCATTGATTT+TGG | 0.132720 | 4.3:+39606438 | MS.gene004024:CDS |
TTTCTTTGCTACACGGTTTA+AGG | 0.151261 | 4.3:+39606866 | MS.gene004024:CDS |
CTTCAAAACCTTTGTTGAAT+TGG | 0.153592 | 4.3:-39605801 | None:intergenic |
CACAATTAATGGAGAAATTT+AGG | 0.174417 | 4.3:+39607105 | MS.gene004024:CDS |
TGCCATTGTCTATATGTTTC+AGG | 0.199418 | 4.3:-39607038 | None:intergenic |
TCCATTGGACTCACAATTAA+TGG | 0.218479 | 4.3:+39607094 | MS.gene004024:CDS |
CTGGTGCTGGTTGTGCCATT+AGG | 0.228538 | 4.3:-39605571 | None:intergenic |
AAAACAAAACGATAGATTTA+AGG | 0.243289 | 4.3:+39606091 | MS.gene004024:CDS |
GATGCTTGAGAGGGAAATTA+TGG | 0.244933 | 4.3:+39606962 | MS.gene004024:CDS |
TTCAAAACCTTTGTTGAATT+GGG | 0.284127 | 4.3:-39605800 | None:intergenic |
GATTTGAGTTATGAACTTTA+TGG | 0.285754 | 4.3:-39605461 | None:intergenic |
ATCCCAGTGATCCTCAATTT+TGG | 0.286472 | 4.3:-39606525 | None:intergenic |
AAATGCAGAACTGCGTTTCT+AGG | 0.293502 | 4.3:-39606780 | None:intergenic |
CATGATGCTCTTTCCCCTAA+TGG | 0.300350 | 4.3:+39605556 | MS.gene004024:CDS |
TGGTGCTGGTTGTGCCATTA+GGG | 0.317958 | 4.3:-39605570 | None:intergenic |
TTTATATGCTTCAACTTGTT+GGG | 0.327100 | 4.3:+39607211 | MS.gene004024:CDS |
ACAGGAGTATCAGGTGAAAA+TGG | 0.327130 | 4.3:-39605643 | None:intergenic |
ATGCCCTAGCGTCGCGGAAA+TGG | 0.329797 | 4.3:+39606649 | MS.gene004024:CDS |
GTTTCTGATCTTGTTAATCA+TGG | 0.337520 | 4.3:+39605664 | MS.gene004024:CDS |
ATTAGCATTTCTATTGTCAT+TGG | 0.363634 | 4.3:-39606148 | None:intergenic |
AGATCAGAAACAGGAGTATC+AGG | 0.366925 | 4.3:-39605652 | None:intergenic |
ACGCAGTTCTGCATTTGATT+AGG | 0.369643 | 4.3:+39606787 | MS.gene004024:CDS |
GGCCTTGAGGCTCGCCTTGT+AGG | 0.370231 | 4.3:+39606249 | MS.gene004024:CDS |
CTCTTCATCATATTGAAATT+GGG | 0.378176 | 4.3:-39605877 | None:intergenic |
CATCAAATACAAAATCTCTA+TGG | 0.379159 | 4.3:-39607148 | None:intergenic |
GAACCCTATAGAAGGTTATA+TGG | 0.379462 | 4.3:+39605393 | MS.gene004024:CDS |
AAATATGCAAATTTCTTGAA+TGG | 0.386099 | 4.3:-39606372 | None:intergenic |
CATATAGACAATGGCAGCTT+AGG | 0.386852 | 4.3:+39607045 | MS.gene004024:CDS |
TGTTGAAACTCATCACAGTT+TGG | 0.391044 | 4.3:-39605364 | None:intergenic |
GAAGCCATATAACCTTCTAT+AGG | 0.392171 | 4.3:-39605397 | None:intergenic |
AAGCTAAGTGGGTCATAAAA+AGG | 0.412714 | 4.3:-39605511 | None:intergenic |
AGGCAACATTCTTCACCCTT+TGG | 0.417772 | 4.3:+39606189 | MS.gene004024:CDS |
ATTATTATTGCTACTGGTGC+TGG | 0.419180 | 4.3:-39605584 | None:intergenic |
TGCTTCAACTTGTTGGGTGC+CGG | 0.420897 | 4.3:+39607217 | MS.gene004024:CDS |
TGCCCTAGCGTCGCGGAAAT+GGG | 0.427853 | 4.3:+39606650 | MS.gene004024:CDS |
GGTACTATTATTATTGCTAC+TGG | 0.432809 | 4.3:-39605590 | None:intergenic |
GGGATAGAGTTCCCCTTACC+AGG | 0.440508 | 4.3:+39606543 | MS.gene004024:CDS |
GTCTCCTCGATTCCTTCTGT+CGG | 0.441440 | 4.3:-39606573 | None:intergenic |
TACCAAAATCAATGATATGA+AGG | 0.442503 | 4.3:-39606440 | None:intergenic |
TTTCCCATTTCCGCGACGCT+AGG | 0.446236 | 4.3:-39606653 | None:intergenic |
CCGCCAAAATTGAGGATCAC+TGG | 0.447330 | 4.3:+39606522 | MS.gene004024:CDS |
TATTTGATGAAGACAGCAAT+TGG | 0.449195 | 4.3:+39607162 | MS.gene004024:CDS |
AAGCCATATAACCTTCTATA+GGG | 0.457326 | 4.3:-39605396 | None:intergenic |
CTGTGATTTGTAAGCTAAGT+GGG | 0.457899 | 4.3:-39605522 | None:intergenic |
AATGACAATAGAAATGCTAA+TGG | 0.460659 | 4.3:+39606150 | MS.gene004024:CDS |
ACCTTTCCTTCGTTTGATGA+AGG | 0.461817 | 4.3:-39606045 | None:intergenic |
AATGGAGGAGGATGCTTGAG+AGG | 0.465699 | 4.3:+39606952 | MS.gene004024:CDS |
CTCCTCCATTCACTTCCCTT+CGG | 0.465787 | 4.3:-39606939 | None:intergenic |
CAATATGAGAACCCTATAGA+AGG | 0.467769 | 4.3:+39605385 | MS.gene004024:CDS |
ATGCTTGAGAGGGAAATTAT+GGG | 0.469263 | 4.3:+39606963 | MS.gene004024:CDS |
CACCAGCTCTATCGCCTACA+AGG | 0.469788 | 4.3:-39606263 | None:intergenic |
TTCTGCTATTTATGATATGT+TGG | 0.469875 | 4.3:+39606905 | MS.gene004024:CDS |
CCTTCTGTCGGGCGAAAGCC+TGG | 0.470645 | 4.3:-39606561 | None:intergenic |
ATAGACAGAGCGAAAATATC+CGG | 0.471744 | 4.3:-39606819 | None:intergenic |
GACAGCAATTGGATGCTTCA+AGG | 0.472919 | 4.3:+39607173 | MS.gene004024:CDS |
TGTCGGGCGAAAGCCTGGTA+AGG | 0.486805 | 4.3:-39606556 | None:intergenic |
CGCCTTGTAGGCGATAGAGC+TGG | 0.491595 | 4.3:+39606261 | MS.gene004024:CDS |
GCAATTGGATGCTTCAAGGT+TGG | 0.492197 | 4.3:+39607177 | MS.gene004024:CDS |
CTGGCCACTGAAAACCATAA+AGG | 0.503527 | 4.3:-39606464 | None:intergenic |
TTCCCATTTCCGCGACGCTA+GGG | 0.504392 | 4.3:-39606652 | None:intergenic |
CGCCAAAATTGAGGATCACT+GGG | 0.504465 | 4.3:+39606523 | MS.gene004024:CDS |
GATAGAAACTTAATAAGCAC+TGG | 0.505792 | 4.3:-39606483 | None:intergenic |
TTCATCTATTACCAATATGT+TGG | 0.508354 | 4.3:+39605744 | MS.gene004024:CDS |
TGATTAACAAGATCAGAAAC+AGG | 0.510638 | 4.3:-39605661 | None:intergenic |
TTCACTTCCCTTCGGTAAGA+CGG | 0.511596 | 4.3:-39606931 | None:intergenic |
CTCAGCAGCAGTGATTCTCT+TGG | 0.512609 | 4.3:-39606313 | None:intergenic |
ATGCAAATTTCTTGAATGGA+GGG | 0.520263 | 4.3:-39606368 | None:intergenic |
TGAGAGGGAAATTATGGGTA+GGG | 0.522045 | 4.3:+39606968 | MS.gene004024:CDS |
TATGCAAATTTCTTGAATGG+AGG | 0.522171 | 4.3:-39606369 | None:intergenic |
TCTCCTCGATTCCTTCTGTC+GGG | 0.522739 | 4.3:-39606572 | None:intergenic |
AATGTTCTGTGCCAACATAT+TGG | 0.522800 | 4.3:-39605755 | None:intergenic |
CTTTGTGATGCATCGCCAAA+GGG | 0.524740 | 4.3:-39606204 | None:intergenic |
TTTGATTAGGAAGATAAGTC+CGG | 0.526586 | 4.3:+39606800 | MS.gene004024:CDS |
TTAAACCGTGTAGCAAAGAA+AGG | 0.528289 | 4.3:-39606864 | None:intergenic |
GTAGTTGCTGTGAACTGTGT+GGG | 0.528753 | 4.3:+39606714 | MS.gene004024:CDS |
AGGGAGAAGTAACAAGCAAT+CGG | 0.530121 | 4.3:+39605930 | MS.gene004024:CDS |
TGGTTTCAAGCAGCTTCCAT+TGG | 0.530154 | 4.3:+39607079 | MS.gene004024:CDS |
TCCATTAATTGTGAGTCCAA+TGG | 0.531558 | 4.3:-39607095 | None:intergenic |
TTTCCTTCGTTTGATGAAGG+TGG | 0.533082 | 4.3:-39606042 | None:intergenic |
CAGCTTAGGAATACAAGAGC+TGG | 0.535109 | 4.3:+39607059 | MS.gene004024:CDS |
ACTAACACTACTTGAAGCAC+AGG | 0.535170 | 4.3:-39605701 | None:intergenic |
CATGAGCGCGAAGAAGAAGA+AGG | 0.535210 | 4.3:+39605910 | MS.gene004024:CDS |
GTTCATAACTCAAATCCTCA+TGG | 0.541442 | 4.3:+39605468 | MS.gene004024:CDS |
CCTCAGACTCAACTCTTGAA+AGG | 0.543868 | 4.3:+39605844 | MS.gene004024:CDS |
GTCGGGCGAAAGCCTGGTAA+GGG | 0.545615 | 4.3:-39606555 | None:intergenic |
AAGATATGAATTGATTATGC+CGG | 0.549732 | 4.3:-39607236 | None:intergenic |
TGATAAAGCTTTGCTTAATG+TGG | 0.551145 | 4.3:+39605993 | MS.gene004024:CDS |
CGAAGGGAAGTGAATGGAGG+AGG | 0.551209 | 4.3:+39606940 | MS.gene004024:CDS |
TTTCTATCAAATAGAGAAGG+TGG | 0.552509 | 4.3:+39606498 | MS.gene004024:CDS |
CCAGGCTTTCGCCCGACAGA+AGG | 0.554024 | 4.3:+39606561 | MS.gene004024:CDS |
CCTTTGTGATGCATCGCCAA+AGG | 0.561319 | 4.3:-39606205 | None:intergenic |
GTGGCTCATTACTTTGCCGA+TGG | 0.563540 | 4.3:+39606228 | MS.gene004024:CDS |
TCTGTGATTTGTAAGCTAAG+TGG | 0.568670 | 4.3:-39605523 | None:intergenic |
TCTATTTCCCAATTCAACAA+AGG | 0.569524 | 4.3:+39605793 | MS.gene004024:CDS |
ATAGTTAGCAAGTCGATGAC+CGG | 0.571078 | 4.3:-39606595 | None:intergenic |
CGCCTACAAGGCGAGCCTCA+AGG | 0.571405 | 4.3:-39606251 | None:intergenic |
TCTTACCGAAGGGAAGTGAA+TGG | 0.573630 | 4.3:+39606934 | MS.gene004024:CDS |
ACCAAAATCAATGATATGAA+GGG | 0.575569 | 4.3:-39606439 | None:intergenic |
AAGGCGAGCCTCAAGGCCAT+CGG | 0.575761 | 4.3:-39606244 | None:intergenic |
ACAGAAGGAATCGAGGAGAC+CGG | 0.577833 | 4.3:+39606576 | MS.gene004024:CDS |
CTTTGGCGATGCATCACAAA+GGG | 0.583245 | 4.3:+39606206 | MS.gene004024:CDS |
GCAGTGATTCTCTTGGTGCT+AGG | 0.583817 | 4.3:-39606306 | None:intergenic |
ATTCACCTTTCTTTGCTACA+CGG | 0.584416 | 4.3:+39606859 | MS.gene004024:CDS |
TGGATGCTTCAAGGTTGGAA+AGG | 0.586034 | 4.3:+39607182 | MS.gene004024:CDS |
GTTGGACGCCGTCTTACCGA+AGG | 0.588496 | 4.3:+39606923 | MS.gene004024:CDS |
TTACTTTGCCGATGGCCTTG+AGG | 0.590932 | 4.3:+39606236 | MS.gene004024:CDS |
ATGAATGTTGTAGCATGTGA+AGG | 0.591903 | 4.3:+39606996 | MS.gene004024:CDS |
CTTTGCTACACGGTTTAAGG+AGG | 0.595296 | 4.3:+39606869 | MS.gene004024:CDS |
CCTTTCAAGAGTTGAGTCTG+AGG | 0.595634 | 4.3:-39605844 | None:intergenic |
GGCTATTAGTGTTGTTGATG+AGG | 0.599082 | 4.3:+39605951 | MS.gene004024:CDS |
ATGAGCGCGAAGAAGAAGAA+GGG | 0.599909 | 4.3:+39605911 | MS.gene004024:CDS |
TTCAAGAGTTGAGTCTGAGG+AGG | 0.601098 | 4.3:-39605841 | None:intergenic |
TTGAGAGGGAAATTATGGGT+AGG | 0.601904 | 4.3:+39606967 | MS.gene004024:CDS |
ATGGAGGAGGATGCTTGAGA+GGG | 0.602055 | 4.3:+39606953 | MS.gene004024:CDS |
AAGGTGGACCGCCAAAATTG+AGG | 0.602746 | 4.3:+39606514 | MS.gene004024:CDS |
TTAGGACTAAGTTAAAGCAA+TGG | 0.607899 | 4.3:+39607123 | MS.gene004024:CDS |
GATTCTCTTGGTGCTAGGCG+AGG | 0.610614 | 4.3:-39606301 | None:intergenic |
TTCAGTGACAGATTCTTCCA+TGG | 0.614881 | 4.3:+39605417 | MS.gene004024:CDS |
GCAAGAATCGTCGATGCTAG+TGG | 0.620710 | 4.3:-39605611 | None:intergenic |
TTGCTGTGAACTGTGTGGGG+AGG | 0.623836 | 4.3:+39606718 | MS.gene004024:CDS |
CATTAGGGGAAAGAGCATCA+TGG | 0.624005 | 4.3:-39605555 | None:intergenic |
ACCTTCATCAAACGAAGGAA+AGG | 0.627171 | 4.3:+39606044 | MS.gene004024:CDS |
TGGCGATGCATCACAAAGGG+TGG | 0.631669 | 4.3:+39606209 | MS.gene004024:CDS |
AAGTTTCTATCAAATAGAGA+AGG | 0.631857 | 4.3:+39606495 | MS.gene004024:CDS |
GGTGCTGGTTGTGCCATTAG+GGG | 0.631907 | 4.3:-39605569 | None:intergenic |
CCTTTGGCGATGCATCACAA+AGG | 0.636123 | 4.3:+39606205 | MS.gene004024:CDS |
GCTTCAAGTAGTGTTAGTGA+TGG | 0.644911 | 4.3:+39605706 | MS.gene004024:CDS |
TAGTTGCTGTGAACTGTGTG+GGG | 0.647970 | 4.3:+39606715 | MS.gene004024:CDS |
TCGGGCGAAAGCCTGGTAAG+GGG | 0.648782 | 4.3:-39606554 | None:intergenic |
TCGCCCGACAGAAGGAATCG+AGG | 0.651016 | 4.3:+39606569 | MS.gene004024:CDS |
AAGGTTTAGAAAGAGTTGAG+AGG | 0.653367 | 4.3:+39607015 | MS.gene004024:CDS |
GCTAGGGCATTGTACTCGAA+CGG | 0.658627 | 4.3:-39606636 | None:intergenic |
GGCCTGAAACATATAGACAA+TGG | 0.658975 | 4.3:+39607036 | MS.gene004024:CDS |
TTGGACGCCGTCTTACCGAA+GGG | 0.665080 | 4.3:+39606924 | MS.gene004024:CDS |
TACCGAAGGGAAGTGAATGG+AGG | 0.669237 | 4.3:+39606937 | MS.gene004024:CDS |
AGTACAATGCCCTAGCGTCG+CGG | 0.670515 | 4.3:+39606643 | MS.gene004024:CDS |
GGTAGTTGCTGTGAACTGTG+TGG | 0.682353 | 4.3:+39606713 | MS.gene004024:CDS |
AAACCACCTTCATCAAACGA+AGG | 0.698210 | 4.3:+39606039 | MS.gene004024:CDS |
TCTTAAAATCAAGAGCAACG+AGG | 0.764812 | 4.3:+39606692 | MS.gene004024:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAACAAAACGATAGATTTA+AGG | + | chr4.3:39606091-39606110 | MS.gene004024:CDS | 20.0% |
!! | AAATATGCAAATTTCTTGAA+TGG | - | chr4.3:39606375-39606394 | None:intergenic | 20.0% |
! | AAGTTTCTATCAAATAGAGA+AGG | + | chr4.3:39606495-39606514 | MS.gene004024:CDS | 25.0% |
! | AATGACAATAGAAATGCTAA+TGG | + | chr4.3:39606150-39606169 | MS.gene004024:CDS | 25.0% |
! | ACCAAAATCAATGATATGAA+GGG | - | chr4.3:39606442-39606461 | None:intergenic | 25.0% |
! | ACTCTTCATCATATTGAAAT+TGG | - | chr4.3:39605881-39605900 | None:intergenic | 25.0% |
! | ATTAGCATTTCTATTGTCAT+TGG | - | chr4.3:39606151-39606170 | None:intergenic | 25.0% |
! | CACAATTAATGGAGAAATTT+AGG | + | chr4.3:39607105-39607124 | MS.gene004024:CDS | 25.0% |
! | CATCAAATACAAAATCTCTA+TGG | - | chr4.3:39607151-39607170 | None:intergenic | 25.0% |
! | CTCTTCATCATATTGAAATT+GGG | - | chr4.3:39605880-39605899 | None:intergenic | 25.0% |
! | TACCAAAATCAATGATATGA+AGG | - | chr4.3:39606443-39606462 | None:intergenic | 25.0% |
! | TTCAAAACCTTTGTTGAATT+GGG | - | chr4.3:39605803-39605822 | None:intergenic | 25.0% |
! | TTCATCTATTACCAATATGT+TGG | + | chr4.3:39605744-39605763 | MS.gene004024:CDS | 25.0% |
!! | GATTTGAGTTATGAACTTTA+TGG | - | chr4.3:39605464-39605483 | None:intergenic | 25.0% |
!! | TTCTGCTATTTATGATATGT+TGG | + | chr4.3:39606905-39606924 | MS.gene004024:CDS | 25.0% |
!! | TTTATATGCTTCAACTTGTT+GGG | + | chr4.3:39607211-39607230 | MS.gene004024:CDS | 25.0% |
!! | TTTTATATGCTTCAACTTGT+TGG | + | chr4.3:39607210-39607229 | MS.gene004024:CDS | 25.0% |
!!! | ATTGATTTTGGTATCCTTTA+TGG | + | chr4.3:39606450-39606469 | MS.gene004024:CDS | 25.0% |
AAGCCATATAACCTTCTATA+GGG | - | chr4.3:39605399-39605418 | None:intergenic | 30.0% | |
ATGCAAATTTCTTGAATGGA+GGG | - | chr4.3:39606371-39606390 | None:intergenic | 30.0% | |
CTTCAAAACCTTTGTTGAAT+TGG | - | chr4.3:39605804-39605823 | None:intergenic | 30.0% | |
GATAGAAACTTAATAAGCAC+TGG | - | chr4.3:39606486-39606505 | None:intergenic | 30.0% | |
GGTACTATTATTATTGCTAC+TGG | - | chr4.3:39605593-39605612 | None:intergenic | 30.0% | |
GTTTCTGATCTTGTTAATCA+TGG | + | chr4.3:39605664-39605683 | MS.gene004024:CDS | 30.0% | |
TATGCAAATTTCTTGAATGG+AGG | - | chr4.3:39606372-39606391 | None:intergenic | 30.0% | |
TATTTGATGAAGACAGCAAT+TGG | + | chr4.3:39607162-39607181 | MS.gene004024:CDS | 30.0% | |
TCTATTTCCCAATTCAACAA+AGG | + | chr4.3:39605793-39605812 | MS.gene004024:CDS | 30.0% | |
TGATAAAGCTTTGCTTAATG+TGG | + | chr4.3:39605993-39606012 | MS.gene004024:CDS | 30.0% | |
TGATTAACAAGATCAGAAAC+AGG | - | chr4.3:39605664-39605683 | None:intergenic | 30.0% | |
TTAGGACTAAGTTAAAGCAA+TGG | + | chr4.3:39607123-39607142 | MS.gene004024:CDS | 30.0% | |
TTCGCTCTGTCTATTATTAA+TGG | + | chr4.3:39606828-39606847 | MS.gene004024:CDS | 30.0% | |
TTTCTATCAAATAGAGAAGG+TGG | + | chr4.3:39606498-39606517 | MS.gene004024:CDS | 30.0% | |
TTTGATTAGGAAGATAAGTC+CGG | + | chr4.3:39606800-39606819 | MS.gene004024:CDS | 30.0% | |
!! | TTTTTGCTATCACGTTTCTT+TGG | - | chr4.3:39606075-39606094 | None:intergenic | 30.0% |
!!! | ACCCTTCATATCATTGATTT+TGG | + | chr4.3:39606438-39606457 | MS.gene004024:CDS | 30.0% |
!!! | ATGGTCTTTTAAAGCAGATT+AGG | + | chr4.3:39606169-39606188 | MS.gene004024:CDS | 30.0% |
AAGCTAAGTGGGTCATAAAA+AGG | - | chr4.3:39605514-39605533 | None:intergenic | 35.0% | |
AAGGTTTAGAAAGAGTTGAG+AGG | + | chr4.3:39607015-39607034 | MS.gene004024:CDS | 35.0% | |
AATGTTCTGTGCCAACATAT+TGG | - | chr4.3:39605758-39605777 | None:intergenic | 35.0% | |
ATAGACAGAGCGAAAATATC+CGG | - | chr4.3:39606822-39606841 | None:intergenic | 35.0% | |
ATGAATGTTGTAGCATGTGA+AGG | + | chr4.3:39606996-39607015 | MS.gene004024:CDS | 35.0% | |
ATGCTTGAGAGGGAAATTAT+GGG | + | chr4.3:39606963-39606982 | MS.gene004024:CDS | 35.0% | |
ATTATTATTGCTACTGGTGC+TGG | - | chr4.3:39605587-39605606 | None:intergenic | 35.0% | |
ATTCACCTTTCTTTGCTACA+CGG | + | chr4.3:39606859-39606878 | MS.gene004024:CDS | 35.0% | |
CAATATGAGAACCCTATAGA+AGG | + | chr4.3:39605385-39605404 | MS.gene004024:CDS | 35.0% | |
GAACCCTATAGAAGGTTATA+TGG | + | chr4.3:39605393-39605412 | MS.gene004024:CDS | 35.0% | |
GAAGCCATATAACCTTCTAT+AGG | - | chr4.3:39605400-39605419 | None:intergenic | 35.0% | |
GTTCATAACTCAAATCCTCA+TGG | + | chr4.3:39605468-39605487 | MS.gene004024:CDS | 35.0% | |
TCCATTAATTGTGAGTCCAA+TGG | - | chr4.3:39607098-39607117 | None:intergenic | 35.0% | |
TCCATTGGACTCACAATTAA+TGG | + | chr4.3:39607094-39607113 | MS.gene004024:CDS | 35.0% | |
TCTTAAAATCAAGAGCAACG+AGG | + | chr4.3:39606692-39606711 | MS.gene004024:CDS | 35.0% | |
TGAAAAATCAGTGTCTTCCA+TGG | - | chr4.3:39605437-39605456 | None:intergenic | 35.0% | |
TGCCATTGTCTATATGTTTC+AGG | - | chr4.3:39607041-39607060 | None:intergenic | 35.0% | |
TGTTGAAACTCATCACAGTT+TGG | - | chr4.3:39605367-39605386 | None:intergenic | 35.0% | |
TTAAACCGTGTAGCAAAGAA+AGG | - | chr4.3:39606867-39606886 | None:intergenic | 35.0% | |
TTTCTTTGCTACACGGTTTA+AGG | + | chr4.3:39606866-39606885 | MS.gene004024:CDS | 35.0% | |
! | CTGTGATTTGTAAGCTAAGT+GGG | - | chr4.3:39605525-39605544 | None:intergenic | 35.0% |
! | GTATCCTTTATGGTTTTCAG+TGG | + | chr4.3:39606460-39606479 | MS.gene004024:CDS | 35.0% |
! | TCTGTGATTTGTAAGCTAAG+TGG | - | chr4.3:39605526-39605545 | None:intergenic | 35.0% |
AAACCACCTTCATCAAACGA+AGG | + | chr4.3:39606039-39606058 | MS.gene004024:CDS | 40.0% | |
AAATGCAGAACTGCGTTTCT+AGG | - | chr4.3:39606783-39606802 | None:intergenic | 40.0% | |
ACCTTCATCAAACGAAGGAA+AGG | + | chr4.3:39606044-39606063 | MS.gene004024:CDS | 40.0% | |
ACCTTTCCTTCGTTTGATGA+AGG | - | chr4.3:39606048-39606067 | None:intergenic | 40.0% | |
ACGCAGTTCTGCATTTGATT+AGG | + | chr4.3:39606787-39606806 | MS.gene004024:CDS | 40.0% | |
ACTAACACTACTTGAAGCAC+AGG | - | chr4.3:39605704-39605723 | None:intergenic | 40.0% | |
AGGGAGAAGTAACAAGCAAT+CGG | + | chr4.3:39605930-39605949 | MS.gene004024:CDS | 40.0% | |
ATAGTTAGCAAGTCGATGAC+CGG | - | chr4.3:39606598-39606617 | None:intergenic | 40.0% | |
CATATAGACAATGGCAGCTT+AGG | + | chr4.3:39607045-39607064 | MS.gene004024:CDS | 40.0% | |
GATGCTTGAGAGGGAAATTA+TGG | + | chr4.3:39606962-39606981 | MS.gene004024:CDS | 40.0% | |
GCTTCAAGTAGTGTTAGTGA+TGG | + | chr4.3:39605706-39605725 | MS.gene004024:CDS | 40.0% | |
GGCCTGAAACATATAGACAA+TGG | + | chr4.3:39607036-39607055 | MS.gene004024:CDS | 40.0% | |
TGAGAGGGAAATTATGGGTA+GGG | + | chr4.3:39606968-39606987 | MS.gene004024:CDS | 40.0% | |
TTCAGTGACAGATTCTTCCA+TGG | + | chr4.3:39605417-39605436 | MS.gene004024:CDS | 40.0% | |
TTGAGAGGGAAATTATGGGT+AGG | + | chr4.3:39606967-39606986 | MS.gene004024:CDS | 40.0% | |
TTTCCTTCGTTTGATGAAGG+TGG | - | chr4.3:39606045-39606064 | None:intergenic | 40.0% | |
! | ATCCCAGTGATCCTCAATTT+TGG | - | chr4.3:39606528-39606547 | None:intergenic | 40.0% |
! | GGCTATTAGTGTTGTTGATG+AGG | + | chr4.3:39605951-39605970 | MS.gene004024:CDS | 40.0% |
!! | ACAGGAGTATCAGGTGAAAA+TGG | - | chr4.3:39605646-39605665 | None:intergenic | 40.0% |
!! | AGATCAGAAACAGGAGTATC+AGG | - | chr4.3:39605655-39605674 | None:intergenic | 40.0% |
AGGCAACATTCTTCACCCTT+TGG | + | chr4.3:39606189-39606208 | MS.gene004024:CDS | 45.0% | |
ATGAGCGCGAAGAAGAAGAA+GGG | + | chr4.3:39605911-39605930 | MS.gene004024:CDS | 45.0% | |
CAGCTTAGGAATACAAGAGC+TGG | + | chr4.3:39607059-39607078 | MS.gene004024:CDS | 45.0% | |
CATGATGCTCTTTCCCCTAA+TGG | + | chr4.3:39605556-39605575 | MS.gene004024:CDS | 45.0% | |
CCTCAGACTCAACTCTTGAA+AGG | + | chr4.3:39605844-39605863 | MS.gene004024:CDS | 45.0% | |
CCTTTCAAGAGTTGAGTCTG+AGG | - | chr4.3:39605847-39605866 | None:intergenic | 45.0% | |
CGCCAAAATTGAGGATCACT+GGG | + | chr4.3:39606523-39606542 | MS.gene004024:CDS | 45.0% | |
CTGGCCACTGAAAACCATAA+AGG | - | chr4.3:39606467-39606486 | None:intergenic | 45.0% | |
CTTTGCTACACGGTTTAAGG+AGG | + | chr4.3:39606869-39606888 | MS.gene004024:CDS | 45.0% | |
CTTTGGCGATGCATCACAAA+GGG | + | chr4.3:39606206-39606225 | MS.gene004024:CDS | 45.0% | |
CTTTGTGATGCATCGCCAAA+GGG | - | chr4.3:39606207-39606226 | None:intergenic | 45.0% | |
GACAGCAATTGGATGCTTCA+AGG | + | chr4.3:39607173-39607192 | MS.gene004024:CDS | 45.0% | |
GCAATTGGATGCTTCAAGGT+TGG | + | chr4.3:39607177-39607196 | MS.gene004024:CDS | 45.0% | |
GTAGTTGCTGTGAACTGTGT+GGG | + | chr4.3:39606714-39606733 | MS.gene004024:CDS | 45.0% | |
GTGGGTCATAAAAAGGTCTC+TGG | - | chr4.3:39605507-39605526 | None:intergenic | 45.0% | |
TAGTTGCTGTGAACTGTGTG+GGG | + | chr4.3:39606715-39606734 | MS.gene004024:CDS | 45.0% | |
TCTTACCGAAGGGAAGTGAA+TGG | + | chr4.3:39606934-39606953 | MS.gene004024:CDS | 45.0% | |
TGGATGCTTCAAGGTTGGAA+AGG | + | chr4.3:39607182-39607201 | MS.gene004024:CDS | 45.0% | |
TGGTTTCAAGCAGCTTCCAT+TGG | + | chr4.3:39607079-39607098 | MS.gene004024:CDS | 45.0% | |
TTCAAGAGTTGAGTCTGAGG+AGG | - | chr4.3:39605844-39605863 | None:intergenic | 45.0% | |
TTCACTTCCCTTCGGTAAGA+CGG | - | chr4.3:39606934-39606953 | None:intergenic | 45.0% | |
! | CCAGTGATCCTCAATTTTGG+CGG | - | chr4.3:39606525-39606544 | None:intergenic | 45.0% |
! | GGTCAACGTTTTCTTCCATG+AGG | - | chr4.3:39605486-39605505 | None:intergenic | 45.0% |
!! | CATTAGGGGAAAGAGCATCA+TGG | - | chr4.3:39605558-39605577 | None:intergenic | 45.0% |
AAGGTGGACCGCCAAAATTG+AGG | + | chr4.3:39606514-39606533 | MS.gene004024:CDS | 50.0% | |
AATGGAGGAGGATGCTTGAG+AGG | + | chr4.3:39606952-39606971 | MS.gene004024:CDS | 50.0% | |
ACAGAAGGAATCGAGGAGAC+CGG | + | chr4.3:39606576-39606595 | MS.gene004024:CDS | 50.0% | |
ATGGAGGAGGATGCTTGAGA+GGG | + | chr4.3:39606953-39606972 | MS.gene004024:CDS | 50.0% | |
CATGAGCGCGAAGAAGAAGA+AGG | + | chr4.3:39605910-39605929 | MS.gene004024:CDS | 50.0% | |
CCGCCAAAATTGAGGATCAC+TGG | + | chr4.3:39606522-39606541 | MS.gene004024:CDS | 50.0% | |
CCTTTGGCGATGCATCACAA+AGG | + | chr4.3:39606205-39606224 | MS.gene004024:CDS | 50.0% | |
CCTTTGTGATGCATCGCCAA+AGG | - | chr4.3:39606208-39606227 | None:intergenic | 50.0% | |
CTCAGCAGCAGTGATTCTCT+TGG | - | chr4.3:39606316-39606335 | None:intergenic | 50.0% | |
CTCCTCCATTCACTTCCCTT+CGG | - | chr4.3:39606942-39606961 | None:intergenic | 50.0% | |
GCAAGAATCGTCGATGCTAG+TGG | - | chr4.3:39605614-39605633 | None:intergenic | 50.0% | |
GGTAGTTGCTGTGAACTGTG+TGG | + | chr4.3:39606713-39606732 | MS.gene004024:CDS | 50.0% | |
GTCTCCTCGATTCCTTCTGT+CGG | - | chr4.3:39606576-39606595 | None:intergenic | 50.0% | |
GTGGCTCATTACTTTGCCGA+TGG | + | chr4.3:39606228-39606247 | MS.gene004024:CDS | 50.0% | |
TACCGAAGGGAAGTGAATGG+AGG | + | chr4.3:39606937-39606956 | MS.gene004024:CDS | 50.0% | |
TCTCCTCGATTCCTTCTGTC+GGG | - | chr4.3:39606575-39606594 | None:intergenic | 50.0% | |
! | TTACTTTGCCGATGGCCTTG+AGG | + | chr4.3:39606236-39606255 | MS.gene004024:CDS | 50.0% |
!! | GCAGTGATTCTCTTGGTGCT+AGG | - | chr4.3:39606309-39606328 | None:intergenic | 50.0% |
!! | GCTAGGGCATTGTACTCGAA+CGG | - | chr4.3:39606639-39606658 | None:intergenic | 50.0% |
!! | TGCTTCAACTTGTTGGGTGC+CGG | + | chr4.3:39607217-39607236 | MS.gene004024:CDS | 50.0% |
!! | TGGTGCTGGTTGTGCCATTA+GGG | - | chr4.3:39605573-39605592 | None:intergenic | 50.0% |
AGTACAATGCCCTAGCGTCG+CGG | + | chr4.3:39606643-39606662 | MS.gene004024:CDS | 55.0% | |
CACCAGCTCTATCGCCTACA+AGG | - | chr4.3:39606266-39606285 | None:intergenic | 55.0% | |
CGAAGGGAAGTGAATGGAGG+AGG | + | chr4.3:39606940-39606959 | MS.gene004024:CDS | 55.0% | |
GGGATAGAGTTCCCCTTACC+AGG | + | chr4.3:39606543-39606562 | MS.gene004024:CDS | 55.0% | |
TGGCGATGCATCACAAAGGG+TGG | + | chr4.3:39606209-39606228 | MS.gene004024:CDS | 55.0% | |
TTCCCATTTCCGCGACGCTA+GGG | - | chr4.3:39606655-39606674 | None:intergenic | 55.0% | |
TTGCTGTGAACTGTGTGGGG+AGG | + | chr4.3:39606718-39606737 | MS.gene004024:CDS | 55.0% | |
TTGGACGCCGTCTTACCGAA+GGG | + | chr4.3:39606924-39606943 | MS.gene004024:CDS | 55.0% | |
TTTCCCATTTCCGCGACGCT+AGG | - | chr4.3:39606656-39606675 | None:intergenic | 55.0% | |
!! | CTGGTGCTGGTTGTGCCATT+AGG | - | chr4.3:39605574-39605593 | None:intergenic | 55.0% |
!! | GATTCTCTTGGTGCTAGGCG+AGG | - | chr4.3:39606304-39606323 | None:intergenic | 55.0% |
!! | GGTGCTGGTTGTGCCATTAG+GGG | - | chr4.3:39605572-39605591 | None:intergenic | 55.0% |
AAGGCGAGCCTCAAGGCCAT+CGG | - | chr4.3:39606247-39606266 | None:intergenic | 60.0% | |
ATGCCCTAGCGTCGCGGAAA+TGG | + | chr4.3:39606649-39606668 | MS.gene004024:CDS | 60.0% | |
CGCCTTGTAGGCGATAGAGC+TGG | + | chr4.3:39606261-39606280 | MS.gene004024:CDS | 60.0% | |
GTCGGGCGAAAGCCTGGTAA+GGG | - | chr4.3:39606558-39606577 | None:intergenic | 60.0% | |
GTTGGACGCCGTCTTACCGA+AGG | + | chr4.3:39606923-39606942 | MS.gene004024:CDS | 60.0% | |
TCGCCCGACAGAAGGAATCG+AGG | + | chr4.3:39606569-39606588 | MS.gene004024:CDS | 60.0% | |
TCGGGCGAAAGCCTGGTAAG+GGG | - | chr4.3:39606557-39606576 | None:intergenic | 60.0% | |
TGCCCTAGCGTCGCGGAAAT+GGG | + | chr4.3:39606650-39606669 | MS.gene004024:CDS | 60.0% | |
TGTCGGGCGAAAGCCTGGTA+AGG | - | chr4.3:39606559-39606578 | None:intergenic | 60.0% | |
CCAGGCTTTCGCCCGACAGA+AGG | + | chr4.3:39606561-39606580 | MS.gene004024:CDS | 65.0% | |
CCTTCTGTCGGGCGAAAGCC+TGG | - | chr4.3:39606564-39606583 | None:intergenic | 65.0% | |
CGCCTACAAGGCGAGCCTCA+AGG | - | chr4.3:39606254-39606273 | None:intergenic | 65.0% | |
GGCCTTGAGGCTCGCCTTGT+AGG | + | chr4.3:39606249-39606268 | MS.gene004024:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 39605358 | 39607244 | 39605358 | ID=MS.gene004024 |
chr4.3 | mRNA | 39605358 | 39607244 | 39605358 | ID=MS.gene004024.t1;Parent=MS.gene004024 |
chr4.3 | exon | 39605358 | 39607244 | 39605358 | ID=MS.gene004024.t1.exon1;Parent=MS.gene004024.t1 |
chr4.3 | CDS | 39605358 | 39607244 | 39605358 | ID=cds.MS.gene004024.t1;Parent=MS.gene004024.t1 |
Gene Sequence |
Protein sequence |