AlfalfaGEDB | MS.gene004087

M. sativa cultivar XinJiangDaYe / MS.gene004087

KEGG: K09422
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene004087.t1	AES88815.1	98.8	253	3	0	1	253	1	253	8.60E-122	446.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene004087.t1	Q9LX82	62.8	247	79	5	1	239	1	242	4.7e-60	232.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene004087.t1	G7JTP3	98.8	253	3	0	1	253	1	253	6.2e-122	446.4

TFs/TRs:

Gene ID	Type	Classification
MS.gene004087.t1	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene004087.t1	MTR_4g063100	98.814	253	3	0	1	253	1	253	0.0	522
MS.gene004087.t1	MTR_4g063100	96.818	220	7	0	34	253	5	224	1.44e-159	441
MS.gene004087.t1	MTR_4g063100	98.413	189	3	0	65	253	1	189	1.49e-138	387
MS.gene004087.t1	MTR_4g063100	98.830	171	2	0	83	253	6	176	1.37e-124	351
MS.gene004087.t1	MTR_4g063100	98.639	147	2	0	107	253	1	147	1.36e-104	300
MS.gene004087.t1	MTR_2g096380	59.231	260	62	12	1	243	1	233	4.82e-86	256
MS.gene004087.t1	MTR_2g096380	55.157	223	57	11	38	243	18	214	5.29e-61	191
MS.gene004087.t1	MTR_1g045610	65.455	110	38	0	1	110	15	124	2.51e-51	168
MS.gene004087.t1	MTR_1g073170	61.818	110	42	0	1	110	14	123	1.97e-48	160
MS.gene004087.t1	MTR_1g110460	63.208	106	39	0	8	113	27	132	3.26e-48	162
MS.gene004087.t1	MTR_1g086530	58.974	117	45	1	2	115	25	141	5.60e-47	157
MS.gene004087.t1	MTR_7g035075	60.377	106	42	0	8	113	15	120	1.96e-45	151
MS.gene004087.t1	MTR_6g006030	60.377	106	42	0	8	113	15	120	2.32e-45	151
MS.gene004087.t1	MTR_1g062940	63.107	103	38	0	8	110	7	109	4.38e-45	151
MS.gene004087.t1	MTR_1g086510	60.185	108	43	0	8	115	22	129	7.44e-44	149
MS.gene004087.t1	MTR_2g096380	51.020	196	53	11	65	243	1	170	1.15e-41	140
MS.gene004087.t1	MTR_4g102380	61.165	103	40	0	8	110	13	115	2.47e-41	143
MS.gene004087.t1	MTR_3g097450	57.009	107	46	0	4	110	9	115	4.67e-40	140
MS.gene004087.t1	MTR_4g100720	50.376	133	58	2	3	127	9	141	7.02e-40	136
MS.gene004087.t1	MTR_5g029840	59.223	103	42	0	8	110	13	115	8.59e-40	140
MS.gene004087.t1	MTR_5g078140	51.587	126	57	1	8	129	13	138	9.23e-40	140
MS.gene004087.t1	MTR_3g074520	56.604	106	46	0	8	113	13	118	3.33e-39	139
MS.gene004087.t1	MTR_8g027345	52.500	120	55	1	9	128	14	131	4.21e-39	138
MS.gene004087.t1	MTR_3g065440	59.223	103	42	0	8	110	13	115	4.53e-39	138
MS.gene004087.t1	MTR_7g117730	57.843	102	43	0	9	110	14	115	4.85e-39	136
MS.gene004087.t1	MTR_7g076740	57.692	104	43	1	8	110	13	116	6.49e-39	137
MS.gene004087.t1	MTR_1g112760	54.206	107	49	0	8	114	14	120	6.80e-39	135
MS.gene004087.t1	MTR_4g073420	50.000	136	64	2	7	139	12	146	1.03e-38	136
MS.gene004087.t1	MTR_4g091490	56.311	103	45	0	8	110	14	116	1.16e-38	138
MS.gene004087.t1	MTR_3g077110	54.206	107	49	0	8	114	13	119	1.34e-38	137
MS.gene004087.t1	MTR_4g082290	46.000	150	78	1	8	154	13	162	1.72e-38	139
MS.gene004087.t1	MTR_1g076150	48.507	134	63	1	8	135	13	146	1.76e-38	135
MS.gene004087.t1	MTR_2g089620	56.311	103	45	0	8	110	13	115	3.26e-38	136
MS.gene004087.t1	MTR_2g011660	57.282	103	44	0	8	110	14	116	3.74e-38	136
MS.gene004087.t1	MTR_2g033170	58.333	108	45	0	8	115	25	132	4.73e-38	135
MS.gene004087.t1	MTR_2g099740	53.398	103	48	0	8	110	13	115	5.49e-38	137
MS.gene004087.t1	MTR_4g082230	45.333	150	79	1	8	154	13	162	5.72e-38	137
MS.gene004087.t1	MTR_8g031360	57.692	104	43	1	8	110	14	117	6.28e-38	134
MS.gene004087.t1	MTR_5g079670	55.882	102	45	0	9	110	13	114	6.41e-38	132
MS.gene004087.t1	MTR_8g017440	54.369	103	47	0	8	110	13	115	7.05e-38	135
MS.gene004087.t1	MTR_7g096930	49.180	122	62	0	8	129	13	134	7.14e-38	134
MS.gene004087.t1	MTR_4g485530	56.863	102	44	0	9	110	14	115	7.25e-38	131
MS.gene004087.t1	MTR_7g115650	54.369	103	47	0	8	110	13	115	7.59e-38	132
MS.gene004087.t1	MTR_3g083540	56.311	103	45	0	8	110	42	144	1.29e-37	134
MS.gene004087.t1	MTR_8g095390	54.808	104	47	0	7	110	12	115	1.58e-37	134
MS.gene004087.t1	MTR_1g085040	55.660	106	47	0	8	113	13	118	1.67e-37	135
MS.gene004087.t1	MTR_1g043080	55.340	103	46	0	8	110	13	115	1.67e-37	132
MS.gene004087.t1	MTR_0008s0390	56.311	103	45	0	8	110	14	116	2.57e-37	132
MS.gene004087.t1	MTR_4g478180	54.717	106	48	0	8	113	14	119	2.72e-37	134
MS.gene004087.t1	MTR_4g065017	51.724	116	56	0	8	123	18	133	2.91e-37	134
MS.gene004087.t1	MTR_0251s0050	56.311	103	45	0	8	110	14	116	2.95e-37	132
MS.gene004087.t1	MTR_7g011170	56.311	103	45	0	8	110	13	115	3.91e-37	133
MS.gene004087.t1	MTR_7g110830	56.075	107	47	0	8	114	13	119	4.35e-37	134
MS.gene004087.t1	MTR_5g007370	53.774	106	49	0	8	113	13	118	5.32e-37	132
MS.gene004087.t1	MTR_2g097910	51.639	122	57	1	8	127	21	142	6.01e-37	132
MS.gene004087.t1	MTR_3g028740	57.282	103	44	0	8	110	23	125	6.11e-37	133
MS.gene004087.t1	MTR_4g123040	56.481	108	47	0	8	115	25	132	9.07e-37	132
MS.gene004087.t1	MTR_2g034790	55.340	103	46	0	8	110	13	115	9.57e-37	132
MS.gene004087.t1	MTR_4g125520	49.593	123	58	1	2	120	7	129	1.11e-36	132
MS.gene004087.t1	MTR_2g089450	48.780	123	63	0	8	130	13	135	1.39e-36	130
MS.gene004087.t1	MTR_2g067420	57.576	99	42	0	8	106	15	113	1.66e-36	132
MS.gene004087.t1	MTR_0008s0280	54.369	103	47	0	7	109	12	114	1.86e-36	129
MS.gene004087.t1	MTR_4g121460	56.311	103	45	0	8	110	13	115	2.01e-36	132
MS.gene004087.t1	MTR_1g100653	47.368	133	65	2	8	137	13	143	2.33e-36	130
MS.gene004087.t1	MTR_1g043050	40.761	184	102	4	8	191	13	189	2.58e-36	129
MS.gene004087.t1	MTR_6g055910	51.852	108	52	0	8	115	15	122	3.18e-36	130
MS.gene004087.t1	MTR_1g085640	54.206	107	49	0	8	114	13	119	3.84e-36	132
MS.gene004087.t1	MTR_4g105130	54.206	107	49	0	8	114	13	119	3.98e-36	131
MS.gene004087.t1	MTR_8g017540	52.427	103	49	0	8	110	59	161	4.83e-36	132
MS.gene004087.t1	MTR_8g017390	51.818	110	52	1	2	110	7	116	5.57e-36	133
MS.gene004087.t1	MTR_6g012690	46.377	138	68	1	8	139	13	150	5.91e-36	131
MS.gene004087.t1	MTR_3g461490	54.369	103	47	0	8	110	13	115	7.49e-36	130
MS.gene004087.t1	MTR_0008s0470	54.369	103	47	0	8	110	14	116	7.52e-36	129
MS.gene004087.t1	MTR_2g064160	48.624	109	56	0	2	110	6	114	8.07e-36	129
MS.gene004087.t1	MTR_3g011610	55.238	105	47	0	6	110	36	140	8.83e-36	133
MS.gene004087.t1	MTR_2g089420	53.211	109	51	0	8	116	12	120	9.04e-36	132
MS.gene004087.t1	MTR_8g017500	51.456	103	50	0	8	110	13	115	1.06e-35	130
MS.gene004087.t1	MTR_1g100667	52.830	106	50	0	8	113	14	119	1.43e-35	128
MS.gene004087.t1	MTR_3g052450	43.571	140	71	2	8	142	41	177	1.46e-35	132
MS.gene004087.t1	MTR_8g098860	51.376	109	53	0	2	110	7	115	2.02e-35	129
MS.gene004087.t1	MTR_3g052430	51.887	106	51	0	8	113	42	147	2.29e-35	132
MS.gene004087.t1	MTR_1g021230	40.217	184	89	6	8	191	58	220	2.65e-35	130
MS.gene004087.t1	MTR_8g017340	50.909	110	53	1	2	110	7	116	3.46e-35	131
MS.gene004087.t1	MTR_8g042410	53.333	105	49	0	6	110	36	140	4.67e-35	131
MS.gene004087.t1	MTR_6g009430	53.398	103	48	0	8	110	13	115	6.28e-35	127
MS.gene004087.t1	MTR_7g111290	57.732	97	41	0	8	104	13	109	1.40e-34	128
MS.gene004087.t1	MTR_8g017350	50.000	110	54	1	2	110	7	116	1.54e-34	130
MS.gene004087.t1	MTR_8g020490	52.941	102	48	0	9	110	10	111	2.43e-34	124
MS.gene004087.t1	MTR_5g010020	37.433	187	115	2	2	188	7	191	3.08e-34	126
MS.gene004087.t1	MTR_7g087130	41.611	149	87	0	8	156	13	161	7.76e-34	125
MS.gene004087.t1	MTR_1g017000	43.972	141	75	2	4	140	9	149	1.28e-33	122
MS.gene004087.t1	MTR_0063s0090	43.182	132	73	2	8	137	13	144	1.37e-33	121
MS.gene004087.t1	MTR_2g088170	55.660	106	46	1	8	112	30	135	1.70e-33	126
MS.gene004087.t1	MTR_7g010210	51.402	107	52	0	4	110	9	115	1.70e-33	124
MS.gene004087.t1	MTR_7g010210	51.402	107	52	0	4	110	9	115	2.06e-33	122
MS.gene004087.t1	MTR_5g079120	50.467	107	53	0	8	114	62	168	2.63e-33	123
MS.gene004087.t1	MTR_5g078910	49.515	103	52	0	8	110	8	110	3.73e-32	119
MS.gene004087.t1	MTR_3g039990	50.485	103	51	0	8	110	14	116	3.74e-32	120
MS.gene004087.t1	MTR_8g060940	50.000	100	50	0	8	107	8	107	9.62e-32	117
MS.gene004087.t1	MTR_5g078930	45.378	119	62	1	1	116	3	121	2.17e-31	115
MS.gene004087.t1	MTR_5g079290	49.515	103	52	0	8	110	18	120	2.67e-31	116
MS.gene004087.t1	MTR_0140s0030	49.515	103	52	0	8	110	14	116	2.93e-31	118
MS.gene004087.t1	MTR_0489s0020	49.515	103	52	0	8	110	14	116	2.93e-31	118
MS.gene004087.t1	MTR_5g042030	49.515	103	52	0	8	110	8	110	4.07e-31	117
MS.gene004087.t1	MTR_0197s0010	48.000	100	52	0	11	110	5	104	5.31e-31	115
MS.gene004087.t1	MTR_1g083630	51.456	103	50	0	8	110	13	115	5.59e-31	120
MS.gene004087.t1	MTR_3g103570	41.781	146	79	2	8	147	13	158	6.32e-31	117
MS.gene004087.t1	MTR_5g079220	48.544	103	53	0	8	110	22	124	1.14e-30	115
MS.gene004087.t1	MTR_8g006470	52.294	109	49	2	4	111	7	113	2.40e-30	114
MS.gene004087.t1	MTR_6g055910	56.098	82	36	0	34	115	12	93	2.55e-30	114
MS.gene004087.t1	MTR_0247s0040	48.148	108	56	0	1	108	1	108	2.63e-30	111
MS.gene004087.t1	MTR_5g078800	49.515	103	52	0	8	110	8	110	3.85e-30	113
MS.gene004087.t1	MTR_7g109320	53.398	103	48	0	8	110	13	115	4.08e-30	115
MS.gene004087.t1	MTR_6g012180	49.515	103	52	0	4	106	9	111	5.42e-30	114
MS.gene004087.t1	MTR_6g090405	40.299	134	76	2	8	140	13	143	7.64e-30	112
MS.gene004087.t1	MTR_4g019370	47.273	110	55	2	9	117	38	145	1.08e-29	114
MS.gene004087.t1	MTR_5g078950	47.525	101	53	0	8	108	8	108	1.16e-29	112
MS.gene004087.t1	MTR_7g102110	48.077	104	53	1	8	110	13	116	1.65e-29	112
MS.gene004087.t1	MTR_0001s0360	47.573	103	54	0	8	110	8	110	1.93e-29	111
MS.gene004087.t1	MTR_5g078860	47.573	103	54	0	8	110	8	110	2.55e-29	112
MS.gene004087.t1	MTR_1g017140	49.038	104	52	1	8	110	13	116	2.82e-29	113
MS.gene004087.t1	MTR_7g017260	45.299	117	60	2	8	120	26	142	3.13e-29	111
MS.gene004087.t1	MTR_0193s0090	43.697	119	67	0	1	119	1	119	4.97e-29	109
MS.gene004087.t1	MTR_5g062790	44.348	115	60	2	7	120	9	120	5.05e-29	111
MS.gene004087.t1	MTR_5g014990	48.113	106	50	2	8	110	13	116	5.54e-29	111
MS.gene004087.t1	MTR_4g029540	33.478	230	135	7	8	233	11	226	5.57e-29	111
MS.gene004087.t1	MTR_5g088610	36.747	166	91	3	7	171	9	161	6.17e-29	112
MS.gene004087.t1	MTR_5g088080	35.849	159	85	4	7	164	12	154	8.57e-29	110
MS.gene004087.t1	MTR_5g088150	35.849	159	85	4	7	164	12	154	8.57e-29	110
MS.gene004087.t1	MTR_5g488210	35.849	159	85	4	7	164	12	154	8.57e-29	110
MS.gene004087.t1	MTR_5g088640	35.849	159	85	4	7	164	12	154	1.06e-28	110
MS.gene004087.t1	MTR_5g488170	35.849	159	85	4	7	164	12	154	1.55e-28	108
MS.gene004087.t1	MTR_5g070020	44.882	127	65	3	3	126	116	240	3.82e-28	110
MS.gene004087.t1	MTR_4g057635	47.115	104	54	1	8	110	13	116	4.18e-28	109
MS.gene004087.t1	MTR_2g095520	48.485	99	50	1	8	105	13	111	4.76e-28	109
MS.gene004087.t1	MTR_4g094982	44.660	103	54	2	9	110	5	105	1.09e-27	107
MS.gene004087.t1	MTR_5g016510	47.059	102	53	1	9	110	5	105	1.62e-27	107
MS.gene004087.t1	MTR_7g111290	68.657	67	21	0	38	104	1	67	1.96e-27	108
MS.gene004087.t1	MTR_4g097570	49.485	97	48	1	8	103	13	109	2.13e-27	107
MS.gene004087.t1	MTR_7g061330	49.020	102	51	1	9	110	113	213	5.99e-27	109
MS.gene004087.t1	MTR_7g061330	37.000	100	61	2	9	107	61	159	2.42e-13	69.7
MS.gene004087.t1	MTR_7g461410	49.020	102	51	1	9	110	113	213	5.99e-27	109
MS.gene004087.t1	MTR_7g461410	37.000	100	61	2	9	107	61	159	2.42e-13	69.7
MS.gene004087.t1	MTR_4g128670	48.485	99	50	1	8	105	13	111	6.97e-27	106
MS.gene004087.t1	MTR_3g463400	42.857	126	68	3	9	133	133	255	8.87e-27	107
MS.gene004087.t1	MTR_4g097570	49.495	99	46	2	8	103	13	110	1.19e-26	105
MS.gene004087.t1	MTR_7g061330	49.020	102	51	1	9	110	77	177	1.31e-26	108
MS.gene004087.t1	MTR_7g061330	37.000	100	61	2	9	107	25	123	3.72e-13	68.9
MS.gene004087.t1	MTR_7g037260	45.133	113	61	1	9	121	145	256	2.56e-26	105
MS.gene004087.t1	MTR_3g101290	44.660	103	54	2	9	110	37	137	9.88e-26	101
MS.gene004087.t1	MTR_6g015455	46.078	102	54	1	9	110	5	105	1.02e-25	106
MS.gene004087.t1	MTR_5g041570	49.533	107	50	3	9	113	134	238	1.29e-25	104
MS.gene004087.t1	MTR_4g082040	45.217	115	59	3	5	117	101	213	2.03e-25	103
MS.gene004087.t1	MTR_3g045430	43.519	108	61	0	6	113	12	119	3.59e-25	101
MS.gene004087.t1	MTR_5g049190	44.444	117	59	3	9	124	19	130	1.24e-24	98.6
MS.gene004087.t1	MTR_7g451170	43.363	113	63	1	9	121	191	302	4.03e-24	100
MS.gene004087.t1	MTR_7g450950	39.450	109	65	1	9	117	157	264	6.51e-24	98.6
MS.gene004087.t1	MTR_5g082910	46.000	100	51	2	9	107	19	116	6.91e-24	97.8
MS.gene004087.t1	MTR_4g105660	44.340	106	56	2	6	110	177	280	8.24e-24	99.4
MS.gene004087.t1	MTR_6g074860	40.299	134	78	2	9	141	4	136	2.69e-23	95.1
MS.gene004087.t1	MTR_5g010650	36.571	175	103	3	9	176	110	283	4.77e-23	97.8
MS.gene004087.t1	MTR_3g077650	42.056	107	61	1	9	115	181	286	6.53e-23	97.1
MS.gene004087.t1	MTR_4g088015	41.593	113	65	1	9	121	221	332	1.15e-22	96.3
MS.gene004087.t1	MTR_3g110028	41.748	103	57	2	9	110	85	185	1.72e-22	96.7
MS.gene004087.t1	MTR_3g110028	34.314	102	65	2	7	107	31	131	1.17e-11	64.7
MS.gene004087.t1	MTR_6g027340	40.566	106	58	3	9	113	16	117	6.85e-22	90.5
MS.gene004087.t1	MTR_3g089045	47.706	109	53	3	9	115	16	122	7.54e-22	92.0
MS.gene004087.t1	MTR_6g027370	41.818	110	61	2	5	113	95	202	8.85e-22	92.8
MS.gene004087.t1	MTR_4g128190	40.777	103	47	2	8	109	12	101	1.25e-21	90.5
MS.gene004087.t1	MTR_5g007300	51.316	76	37	0	8	83	65	140	1.53e-21	87.8
MS.gene004087.t1	MTR_6g027360	42.453	106	56	3	9	113	78	179	1.54e-21	91.7
MS.gene004087.t1	MTR_1g026870	40.777	103	58	2	9	110	85	185	1.89e-21	93.6
MS.gene004087.t1	MTR_1g026870	35.294	102	64	2	7	107	31	131	2.06e-12	67.0
MS.gene004087.t1	MTR_7g037130	41.593	113	65	1	9	121	145	256	3.26e-21	91.3
MS.gene004087.t1	MTR_7g035350	44.231	104	57	1	12	115	228	330	4.39e-21	92.0
MS.gene004087.t1	MTR_7g086960	42.342	111	60	3	5	113	85	193	9.31e-21	90.1
MS.gene004087.t1	MTR_1g057980	33.918	171	87	5	8	154	79	247	2.24e-20	88.2
MS.gene004087.t1	MTR_1g085880	37.209	129	73	2	2	129	7	128	4.90e-20	85.1
MS.gene004087.t1	MTR_1g085770	37.209	129	73	2	2	129	7	128	2.24e-19	85.9
MS.gene004087.t1	MTR_7g061550	35.849	106	66	1	12	115	10	115	2.16e-18	83.6
MS.gene004087.t1	MTR_5g038910	40.196	102	59	2	12	113	29	128	5.21e-18	83.2
MS.gene004087.t1	MTR_5g038910	40.196	102	59	2	12	113	29	128	5.60e-18	82.8
MS.gene004087.t1	MTR_8g468380	39.216	102	60	2	12	113	25	124	3.48e-16	77.8
MS.gene004087.t1	MTR_6g055910	52.941	51	24	0	65	115	2	52	5.37e-14	69.3
MS.gene004087.t1	MTR_0023s0210	35.526	76	49	0	8	83	8	83	9.58e-13	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene004087.t1	AT3G46130	54.902	255	93	8	1	242	3	248	1.42e-79	240
MS.gene004087.t1	AT5G59780	60.435	230	74	7	2	230	3	216	2.79e-79	239
MS.gene004087.t1	AT5G59780	57.812	192	64	7	40	230	20	195	1.66e-57	182
MS.gene004087.t1	AT3G46130	51.376	218	84	8	38	242	8	216	2.59e-57	182
MS.gene004087.t1	AT3G46130	51.389	216	83	8	40	242	20	226	8.91e-57	181
MS.gene004087.t1	AT3G24310	69.903	103	31	0	8	110	19	121	3.87e-50	166
MS.gene004087.t1	AT4G13480	65.138	109	38	0	2	110	1	109	7.11e-50	164
MS.gene004087.t1	AT3G53200	64.815	108	38	0	4	111	6	113	3.65e-49	162
MS.gene004087.t1	AT3G30210	43.363	226	98	5	8	227	28	229	8.49e-49	162
MS.gene004087.t1	AT3G27810	40.594	202	89	4	8	178	21	222	7.83e-48	158
MS.gene004087.t1	AT5G40350	39.631	217	106	3	8	224	18	209	1.70e-47	157
MS.gene004087.t1	AT1G25340	63.208	106	39	0	8	113	19	124	6.84e-47	157
MS.gene004087.t1	AT1G68320	62.264	106	40	0	8	113	20	125	2.46e-46	156
MS.gene004087.t1	AT2G47190	64.078	103	37	0	8	110	21	123	7.53e-46	154
MS.gene004087.t1	AT1G48000	59.804	102	41	0	8	109	33	134	6.22e-44	149
MS.gene004087.t1	AT3G01530	42.197	173	89	3	8	173	26	194	2.95e-43	145
MS.gene004087.t1	AT1G79180	46.053	152	75	1	8	159	15	159	1.72e-42	146
MS.gene004087.t1	AT1G25340	60.377	106	37	1	8	113	19	119	3.22e-42	145
MS.gene004087.t1	AT1G25340	60.377	106	37	1	8	113	19	119	6.32e-42	145
MS.gene004087.t1	AT5G10280	57.547	106	45	0	8	113	13	118	1.05e-40	143
MS.gene004087.t1	AT2G31180	56.604	106	46	0	8	113	13	118	1.97e-40	140
MS.gene004087.t1	AT4G12350	59.048	105	43	0	6	110	11	115	4.96e-40	140
MS.gene004087.t1	AT1G66230	61.165	103	40	0	8	110	13	115	8.00e-40	139
MS.gene004087.t1	AT1G06180	57.282	103	44	0	8	110	13	115	1.33e-39	137
MS.gene004087.t1	AT3G06490	57.407	108	46	0	8	115	20	127	2.68e-39	139
MS.gene004087.t1	AT5G16770	58.491	106	44	0	8	113	13	118	3.77e-39	139
MS.gene004087.t1	AT5G16770	58.491	106	44	0	8	113	13	118	3.77e-39	139
MS.gene004087.t1	AT4G22680	59.223	103	42	0	8	110	13	115	4.13e-39	137
MS.gene004087.t1	AT5G16770	58.491	106	44	0	8	113	13	118	6.24e-39	138
MS.gene004087.t1	AT5G16770	58.491	106	44	0	8	113	13	118	6.24e-39	138
MS.gene004087.t1	AT5G52600	42.169	166	95	1	8	172	13	178	7.45e-39	134
MS.gene004087.t1	AT4G38620	56.731	104	45	0	7	110	12	115	8.61e-39	136
MS.gene004087.t1	AT4G05100	57.282	103	44	0	8	110	14	116	8.71e-39	137
MS.gene004087.t1	AT3G02940	58.491	106	44	0	8	113	13	118	9.24e-39	137
MS.gene004087.t1	AT5G59780	53.293	167	61	7	65	230	1	151	9.71e-39	133
MS.gene004087.t1	AT3G01140	49.275	138	63	2	8	138	13	150	1.15e-38	138
MS.gene004087.t1	AT1G16490	42.308	156	89	1	8	163	15	169	1.27e-38	136
MS.gene004087.t1	AT4G21440	47.552	143	67	2	8	145	13	152	1.39e-38	137
MS.gene004087.t1	AT5G65230	54.717	106	48	0	8	113	13	118	1.49e-38	137
MS.gene004087.t1	AT4G28110	56.311	103	45	0	8	110	13	115	1.55e-38	136
MS.gene004087.t1	AT3G02940	58.491	106	44	0	8	113	13	118	1.68e-38	137
MS.gene004087.t1	AT3G02940	58.491	106	44	0	8	113	13	118	1.68e-38	137
MS.gene004087.t1	AT4G17785	56.604	106	46	0	8	113	14	119	2.19e-38	137
MS.gene004087.t1	AT5G16600	60.194	103	41	0	8	110	13	115	2.21e-38	137
MS.gene004087.t1	AT5G14750	47.101	138	67	2	8	139	17	154	2.43e-38	133
MS.gene004087.t1	AT3G01140	49.275	138	63	2	8	138	56	193	2.56e-38	138
MS.gene004087.t1	AT4G17785	56.604	106	46	0	8	113	14	119	2.67e-38	137
MS.gene004087.t1	AT3G13540	56.075	107	47	0	8	114	24	130	5.18e-38	134
MS.gene004087.t1	AT3G46130	46.597	191	80	8	65	242	1	182	5.47e-38	132
MS.gene004087.t1	AT3G23250	49.254	134	67	1	8	141	13	145	5.65e-38	134
MS.gene004087.t1	AT3G48920	51.538	130	58	1	1	125	12	141	6.51e-38	134
MS.gene004087.t1	AT3G13890	54.369	103	47	0	8	110	13	115	6.83e-38	136
MS.gene004087.t1	AT1G09540	56.604	106	46	0	8	113	13	118	8.88e-38	136
MS.gene004087.t1	AT5G54230	57.282	103	44	0	8	110	13	115	9.00e-38	135
MS.gene004087.t1	AT5G26660	56.311	103	45	0	8	110	13	115	1.02e-37	135
MS.gene004087.t1	AT5G49620	56.481	108	47	0	8	115	27	134	1.42e-37	134
MS.gene004087.t1	AT4G26930	51.852	108	52	0	6	113	18	125	1.85e-37	135
MS.gene004087.t1	AT2G32460	56.604	106	45	1	8	112	7	112	2.37e-37	137
MS.gene004087.t1	AT5G14340	57.282	103	44	0	8	110	25	127	2.49e-37	132
MS.gene004087.t1	AT2G32460	56.604	106	45	1	8	112	19	124	2.55e-37	137
MS.gene004087.t1	AT1G35515	57.843	102	43	0	9	110	14	115	2.72e-37	130
MS.gene004087.t1	AT4G34990	48.837	129	64	1	7	135	12	138	3.61e-37	132
MS.gene004087.t1	AT2G26960	44.231	156	83	2	9	164	22	173	3.65e-37	135
MS.gene004087.t1	AT3G27810	40.000	170	71	4	40	178	4	173	5.08e-37	129
MS.gene004087.t1	AT2G16720	55.882	102	45	0	9	110	14	115	5.22e-37	131
MS.gene004087.t1	AT5G40350	39.459	185	87	3	40	224	5	164	5.82e-37	128
MS.gene004087.t1	AT1G34670	54.717	106	48	0	8	113	13	118	6.20e-37	134
MS.gene004087.t1	AT4G09460	54.808	104	47	0	7	110	12	115	6.36e-37	130
MS.gene004087.t1	AT1G57560	55.340	103	46	0	8	110	13	115	6.85e-37	131
MS.gene004087.t1	AT1G57560	55.340	103	46	0	8	110	13	115	8.72e-37	132
MS.gene004087.t1	AT3G61250	56.311	103	45	0	8	110	13	115	9.36e-37	132
MS.gene004087.t1	AT1G79180	36.444	225	90	6	8	182	15	236	9.93e-37	132
MS.gene004087.t1	AT5G40330	56.311	103	45	0	8	110	13	115	1.00e-36	129
MS.gene004087.t1	AT5G62320	56.364	110	41	1	8	110	14	123	1.24e-36	130
MS.gene004087.t1	AT5G15310	45.890	146	75	2	8	153	13	154	1.31e-36	130
MS.gene004087.t1	AT4G01680	56.311	103	45	0	8	110	13	115	1.50e-36	129
MS.gene004087.t1	AT1G22640	55.882	102	45	0	9	110	14	115	1.62e-36	130
MS.gene004087.t1	AT5G15310	45.890	146	75	2	8	153	13	154	1.67e-36	132
MS.gene004087.t1	AT5G15310	45.890	146	75	2	8	153	13	154	1.70e-36	131
MS.gene004087.t1	AT5G12870	56.311	103	45	0	8	110	19	121	1.79e-36	130
MS.gene004087.t1	AT3G08500	58.252	103	43	0	8	110	31	133	1.87e-36	132
MS.gene004087.t1	AT1G18570	47.183	142	66	3	8	142	14	153	1.97e-36	132
MS.gene004087.t1	AT4G01680	56.311	103	45	0	8	110	13	115	3.93e-36	131
MS.gene004087.t1	AT5G56110	54.206	107	49	0	4	110	9	115	4.00e-36	130
MS.gene004087.t1	AT2G47460	57.282	103	44	0	8	110	13	115	4.42e-36	131
MS.gene004087.t1	AT5G07690	48.819	127	61	1	8	130	13	139	5.12e-36	130
MS.gene004087.t1	AT1G56160	52.427	103	49	0	8	110	15	117	6.34e-36	129
MS.gene004087.t1	AT5G60890	49.550	111	56	0	4	114	9	119	1.43e-35	128
MS.gene004087.t1	AT5G55020	53.846	104	48	0	6	109	25	128	1.53e-35	132
MS.gene004087.t1	AT3G27920	44.853	136	65	1	8	133	15	150	1.63e-35	126
MS.gene004087.t1	AT3G28470	57.143	98	42	0	8	105	13	110	1.64e-35	129
MS.gene004087.t1	AT3G12820	51.456	103	50	0	8	110	15	117	3.38e-35	126
MS.gene004087.t1	AT3G62610	54.369	103	47	0	8	110	13	115	3.85e-35	128
MS.gene004087.t1	AT4G25560	52.830	106	50	0	5	110	8	113	4.52e-35	127
MS.gene004087.t1	AT5G61420	51.402	107	52	0	8	114	13	119	5.12e-35	129
MS.gene004087.t1	AT5G07700	53.398	103	48	0	8	110	13	115	6.16e-35	128
MS.gene004087.t1	AT5G07700	53.398	103	48	0	8	110	13	115	6.16e-35	128
MS.gene004087.t1	AT1G63910	45.238	126	66	1	2	124	7	132	6.71e-35	128
MS.gene004087.t1	AT3G13890	50.000	112	47	1	8	110	13	124	8.26e-35	128
MS.gene004087.t1	AT5G52260	48.438	128	63	1	8	132	13	140	9.32e-35	125
MS.gene004087.t1	AT1G74430	50.467	107	53	0	8	114	13	119	1.87e-34	125
MS.gene004087.t1	AT1G66370	47.619	126	63	1	8	130	9	134	1.88e-34	124
MS.gene004087.t1	AT3G53200	72.222	72	20	0	40	111	9	80	2.72e-34	122
MS.gene004087.t1	AT1G74080	53.922	102	47	0	8	109	13	114	2.84e-34	126
MS.gene004087.t1	AT5G49330	54.369	103	47	0	8	110	13	115	3.75e-34	126
MS.gene004087.t1	AT5G06100	51.923	104	50	0	8	111	33	136	5.92e-34	127
MS.gene004087.t1	AT3G11440	50.000	110	54	1	4	112	38	147	6.19e-34	127
MS.gene004087.t1	AT5G49620	50.000	122	47	1	8	115	27	148	7.03e-34	125
MS.gene004087.t1	AT3G12720	47.573	103	54	0	8	110	23	125	1.00e-33	124
MS.gene004087.t1	AT5G06100	51.923	104	50	0	8	111	33	136	1.54e-33	127
MS.gene004087.t1	AT5G06100	51.923	104	50	0	8	111	33	136	1.54e-33	127
MS.gene004087.t1	AT5G06100	51.923	104	50	0	8	111	33	136	1.54e-33	127
MS.gene004087.t1	AT5G06100	51.923	104	50	0	8	111	33	136	1.54e-33	127
MS.gene004087.t1	AT3G47600	42.177	147	79	1	8	154	13	153	1.80e-33	124
MS.gene004087.t1	AT3G11440	48.148	108	56	0	4	111	38	145	2.16e-33	127
MS.gene004087.t1	AT3G11440	48.148	108	56	0	4	111	38	145	2.16e-33	127
MS.gene004087.t1	AT3G11440	48.148	108	56	0	4	111	38	145	2.16e-33	127
MS.gene004087.t1	AT5G35550	46.400	125	60	1	2	119	9	133	6.27e-33	120
MS.gene004087.t1	AT4G01680	50.435	115	45	1	8	110	13	127	9.96e-33	122
MS.gene004087.t1	AT1G08810	50.485	103	51	0	8	110	13	115	2.23e-32	120
MS.gene004087.t1	AT1G18710	49.515	103	52	0	8	110	13	115	2.99e-32	119
MS.gene004087.t1	AT1G74650	49.074	108	55	0	8	115	13	120	1.22e-31	119
MS.gene004087.t1	AT3G28910	50.485	103	51	0	8	110	13	115	2.58e-31	118
MS.gene004087.t1	AT5G62470	50.485	103	51	0	8	110	13	115	5.39e-31	117
MS.gene004087.t1	AT5G14750	41.791	134	70	2	34	159	4	137	3.24e-30	111
MS.gene004087.t1	AT5G26660	66.197	71	24	0	40	110	14	84	7.24e-30	114
MS.gene004087.t1	AT5G57620	45.946	111	59	1	8	117	13	123	1.03e-29	114
MS.gene004087.t1	AT3G49690	46.429	112	55	2	8	116	13	122	1.61e-29	113
MS.gene004087.t1	AT5G62470	50.485	103	50	1	8	110	13	114	1.62e-29	114
MS.gene004087.t1	AT1G66380	52.427	103	49	0	8	110	9	111	3.12e-29	107
MS.gene004087.t1	AT5G23000	48.077	104	53	1	8	110	13	116	8.46e-29	111
MS.gene004087.t1	AT4G37780	45.536	112	60	1	8	118	13	124	9.66e-29	110
MS.gene004087.t1	AT1G56650	45.968	124	62	1	8	126	9	132	1.08e-28	109
MS.gene004087.t1	AT3G60460	49.565	115	55	2	4	117	8	120	1.29e-28	110
MS.gene004087.t1	AT5G65790	45.536	112	56	2	8	116	13	122	1.36e-28	112
MS.gene004087.t1	AT2G39880	47.664	107	53	2	9	114	50	154	4.77e-28	110
MS.gene004087.t1	AT1G66390	50.485	103	51	0	8	110	9	111	5.60e-28	107
MS.gene004087.t1	AT2G26950	46.729	107	55	1	9	115	18	122	7.72e-28	110
MS.gene004087.t1	AT5G35550	50.495	101	43	1	26	119	36	136	1.17e-27	107
MS.gene004087.t1	AT3G09230	49.020	102	51	1	9	110	55	155	1.24e-27	109
MS.gene004087.t1	AT2G36890	46.226	106	52	2	8	110	13	116	1.21e-26	105
MS.gene004087.t1	AT3G12820	59.155	71	29	0	43	113	2	72	1.61e-26	102
MS.gene004087.t1	AT2G36890	46.226	106	52	2	8	110	54	157	2.15e-26	105
MS.gene004087.t1	AT3G55730	47.619	105	52	2	9	112	56	158	2.55e-26	106
MS.gene004087.t1	AT3G47600	45.217	115	57	1	40	154	39	147	3.48e-26	104
MS.gene004087.t1	AT3G09370	47.059	102	53	1	9	110	130	230	8.24e-26	105
MS.gene004087.t1	AT3G09370	39.000	100	59	2	9	107	78	176	5.42e-13	68.6
MS.gene004087.t1	AT3G09370	47.059	102	53	1	9	110	135	235	8.95e-26	105
MS.gene004087.t1	AT3G09370	39.000	100	59	2	9	107	83	181	5.45e-13	68.6
MS.gene004087.t1	AT1G69560	47.573	103	51	2	9	110	107	207	9.10e-26	103
MS.gene004087.t1	AT1G69560	47.573	103	51	2	9	110	123	223	1.03e-25	103
MS.gene004087.t1	AT3G09370	47.059	102	53	1	9	110	143	243	1.40e-25	105
MS.gene004087.t1	AT3G09370	39.000	100	59	2	9	107	91	189	6.15e-13	68.6
MS.gene004087.t1	AT5G02320	47.059	102	53	1	9	110	127	227	1.41e-25	105
MS.gene004087.t1	AT5G02320	36.000	100	62	2	9	107	75	173	6.87e-12	65.5
MS.gene004087.t1	AT5G02320	47.059	102	53	1	9	110	127	227	1.41e-25	105
MS.gene004087.t1	AT5G02320	36.000	100	62	2	9	107	75	173	6.87e-12	65.5
MS.gene004087.t1	AT3G27785	45.370	108	58	1	9	116	189	295	1.46e-25	104
MS.gene004087.t1	AT1G26780	47.573	103	51	2	9	110	98	198	1.66e-25	101
MS.gene004087.t1	AT5G02320	47.059	102	53	1	9	110	67	167	2.28e-25	104
MS.gene004087.t1	AT5G02320	36.000	100	62	2	9	107	15	113	9.62e-12	64.7
MS.gene004087.t1	AT1G26780	47.573	103	51	2	9	110	98	198	2.48e-25	102
MS.gene004087.t1	AT5G17800	38.686	137	78	3	2	133	86	221	2.64e-25	102
MS.gene004087.t1	AT3G50060	44.118	102	56	1	9	110	6	106	3.19e-25	101
MS.gene004087.t1	AT5G58850	41.129	124	69	3	9	131	105	225	6.99e-25	102
MS.gene004087.t1	AT5G11050	40.833	120	68	2	9	127	105	222	1.42e-24	101
MS.gene004087.t1	AT4G18770	42.735	117	63	2	9	122	217	332	1.47e-24	101
MS.gene004087.t1	AT5G67300	44.118	102	56	1	9	110	6	106	1.79e-24	99.8
MS.gene004087.t1	AT2G23290	46.078	102	54	1	9	110	13	113	1.93e-24	99.8
MS.gene004087.t1	AT1G17950	47.788	113	55	3	9	120	5	114	2.33e-24	98.2
MS.gene004087.t1	AT4G37260	43.396	106	59	1	9	114	13	117	1.19e-23	97.8
MS.gene004087.t1	AT5G11510	41.176	102	59	1	9	110	81	181	1.24e-22	97.1
MS.gene004087.t1	AT5G11510	35.294	102	64	2	7	107	27	127	2.84e-12	66.6
MS.gene004087.t1	AT5G11510	41.176	102	59	1	9	110	81	181	1.24e-22	97.1
MS.gene004087.t1	AT5G11510	35.294	102	64	2	7	107	27	127	2.84e-12	66.6
MS.gene004087.t1	AT5G11510	41.176	102	59	1	9	110	81	181	1.24e-22	97.1
MS.gene004087.t1	AT5G11510	35.294	102	64	2	7	107	27	127	2.84e-12	66.6
MS.gene004087.t1	AT5G11510	41.176	102	59	1	9	110	81	181	1.34e-22	97.1
MS.gene004087.t1	AT5G11510	35.294	102	64	2	7	107	27	127	2.72e-12	66.6
MS.gene004087.t1	AT5G11510	41.176	102	59	1	9	110	81	181	1.39e-22	97.1
MS.gene004087.t1	AT5G11510	35.294	102	64	2	7	107	27	127	2.67e-12	66.6
MS.gene004087.t1	AT4G33450	41.176	119	68	2	8	125	18	135	2.87e-22	92.4
MS.gene004087.t1	AT3G29020	35.878	131	80	2	4	131	57	186	3.58e-22	92.0
MS.gene004087.t1	AT1G73410	46.789	109	55	2	9	116	6	112	4.82e-22	91.7
MS.gene004087.t1	AT3G29020	35.878	131	80	2	4	131	59	188	8.57e-22	92.4
MS.gene004087.t1	AT1G73410	46.789	109	55	2	9	116	6	112	1.22e-21	89.7
MS.gene004087.t1	AT1G66380	57.895	76	32	0	35	110	3	78	1.85e-21	86.7
MS.gene004087.t1	AT2G25230	40.741	108	61	2	12	119	29	133	2.51e-21	89.7
MS.gene004087.t1	AT3G23250	49.438	89	44	1	53	141	1	88	3.31e-21	89.4
MS.gene004087.t1	AT5G14750	44.086	93	46	2	53	139	1	93	4.16e-21	86.7
MS.gene004087.t1	AT5G14750	44.086	93	46	2	53	139	1	93	4.16e-21	86.7
MS.gene004087.t1	AT5G40360	33.553	152	97	2	4	152	153	303	4.90e-21	90.9
MS.gene004087.t1	AT1G22640	63.793	58	21	0	53	110	1	58	6.78e-21	87.8
MS.gene004087.t1	AT4G32730	38.835	103	60	2	9	110	87	187	2.12e-20	90.5
MS.gene004087.t1	AT4G32730	33.333	102	66	2	7	107	33	133	1.70e-11	64.3
MS.gene004087.t1	AT4G32730	38.835	103	60	2	9	110	87	187	2.12e-20	90.5
MS.gene004087.t1	AT4G32730	33.333	102	66	2	7	107	33	133	1.70e-11	64.3
MS.gene004087.t1	AT4G32730	38.835	103	60	2	9	110	87	187	2.12e-20	90.5
MS.gene004087.t1	AT4G32730	33.333	102	66	2	7	107	33	133	1.70e-11	64.3
MS.gene004087.t1	AT4G32730	38.835	103	60	2	9	110	87	187	2.12e-20	90.5
MS.gene004087.t1	AT4G32730	33.333	102	66	2	7	107	33	133	1.70e-11	64.3
MS.gene004087.t1	AT4G32730	38.835	103	60	2	9	110	87	187	2.30e-20	90.5
MS.gene004087.t1	AT4G32730	33.333	102	66	2	7	107	33	133	1.58e-11	64.3
MS.gene004087.t1	AT2G37630	38.679	106	63	1	12	115	7	112	3.36e-19	85.9
MS.gene004087.t1	AT5G39700	39.216	102	61	1	8	109	55	155	7.59e-19	82.0
MS.gene004087.t1	AT2G02820	41.121	107	61	2	12	118	33	137	3.22e-18	84.0
MS.gene004087.t1	AT2G02820	41.121	107	61	2	12	118	33	137	3.31e-18	84.0
MS.gene004087.t1	AT2G02820	41.121	107	61	2	12	118	33	137	4.47e-18	82.4
MS.gene004087.t1	AT1G14350	41.176	102	58	2	12	113	28	127	6.33e-18	82.8
MS.gene004087.t1	AT1G14350	41.176	102	58	2	12	113	28	127	6.33e-18	82.8
MS.gene004087.t1	AT1G18960	37.143	105	63	2	9	113	10	111	8.99e-17	78.6
MS.gene004087.t1	AT1G71030	47.692	65	34	0	46	110	5	69	1.30e-16	75.9
MS.gene004087.t1	AT1G71030	47.692	65	34	0	46	110	19	83	2.03e-16	75.5
MS.gene004087.t1	AT5G40430	37.838	111	65	3	9	119	54	160	2.81e-16	76.3
MS.gene004087.t1	AT4G00540	34.266	143	88	4	8	146	102	242	1.02e-15	76.3
MS.gene004087.t1	AT4G00540	33.113	151	95	4	8	154	100	248	1.10e-15	76.3
MS.gene004087.t1	AT1G66380	45.000	80	44	0	8	87	9	88	5.57e-15	69.3
MS.gene004087.t1	AT3G18100	38.384	99	58	2	7	104	383	479	3.44e-14	72.4
MS.gene004087.t1	AT3G18100	38.384	99	58	2	7	104	544	640	3.62e-14	72.4
MS.gene004087.t1	AT3G18100	38.384	99	58	2	7	104	496	592	4.18e-14	72.0
MS.gene004087.t1	AT3G18100	38.384	99	58	2	7	104	331	427	4.82e-14	71.6
MS.gene004087.t1	AT4G25560	56.522	46	20	0	65	110	2	47	2.01e-13	67.8
MS.gene004087.t1	AT1G14350	30.968	155	78	6	17	170	2	128	1.05e-12	67.4
MS.gene004087.t1	AT1G14350	30.968	155	78	6	17	170	2	128	1.05e-12	67.4

Find 54 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTATGGAACTTCACTCTAAA+TGG	0.146424	4.2:+42040914	MS.gene004087:CDS
CATAACAAGTGTTTCTTCTT+GGG	0.234566	4.2:-42040896	None:intergenic
TTCACTCTAAATGGGGAAAT+AGG	0.260240	4.2:+42040923	MS.gene004087:CDS
CCATAACAAGTGTTTCTTCT+TGG	0.289211	4.2:-42040897	None:intergenic
GGTTATTTGGTGATCGTAGA+TGG	0.292214	4.2:+42040653	MS.gene004087:CDS
ATCTCATTGTCTGTTCTTCC+TGG	0.294103	4.2:-42041545	None:intergenic
GTTCTTCAACCTGTTCTTGA+TGG	0.305333	4.2:+42041824	MS.gene004087:CDS
GATGATGTAGAAGGCATTAT+AGG	0.306843	4.2:-42041881	None:intergenic
GTAGATCAGGTAAGAGTTGC+AGG	0.324383	4.2:+42040821	MS.gene004087:CDS
GGTACTCAATGGATGATATA+TGG	0.324488	4.2:+42041768	MS.gene004087:CDS
ATCTTGCCACGTTTGAGATC+AGG	0.342275	4.2:-42040868	None:intergenic
CTTGTTCAATTTCTTGTACT+TGG	0.347999	4.2:-42041745	None:intergenic
CAAGGGAACACATTTCTAAC+TGG	0.364614	4.2:+42042007	MS.gene004087:CDS
ACAATGAGATTAAGAATTAC+TGG	0.365207	4.2:+42041558	MS.gene004087:CDS
GTTCCCTTGTTGATCATAGA+AGG	0.376985	4.2:-42041993	None:intergenic
TATGGAACTTCACTCTAAAT+GGG	0.390577	4.2:+42040915	MS.gene004087:CDS
AGAACAAGAAGATTACAAAT+TGG	0.394597	4.2:+42040618	MS.gene004087:CDS
TAATCTTCTTGTTCTGTCCA+TGG	0.396833	4.2:-42040610	None:intergenic
GTTGTAGGTTTGAGTAGATC+AGG	0.410818	4.2:+42040808	MS.gene004087:intron
TTCTTCTTCAGACTCTTTGT+TGG	0.419812	4.2:-42041717	None:intergenic
CCAAGAAGAAACACTTGTTA+TGG	0.427820	4.2:+42040897	MS.gene004087:CDS
AAGATGTTATTCCCTCCTAT+TGG	0.427899	4.2:+42041956	MS.gene004087:CDS
TTCATATTTAGATCCATTGT+GGG	0.445170	4.2:+42041913	MS.gene004087:CDS
TCACTAGTTCCATCAAGAAC+AGG	0.449699	4.2:-42041833	None:intergenic
TCACAAGAAATAAGCAGAAA+AGG	0.460369	4.2:+42040586	MS.gene004087:CDS
TAATCCCATGATGATGTAGA+AGG	0.467172	4.2:-42041890	None:intergenic
TAAGAGTTGCAGGTTACGTT+GGG	0.469904	4.2:+42040831	MS.gene004087:CDS
ATAACAAGTGTTTCTTCTTG+GGG	0.472612	4.2:-42040895	None:intergenic
GTTATTTGGTGATCGTAGAT+GGG	0.492828	4.2:+42040654	MS.gene004087:CDS
TAATGCCTTCTACATCATCA+TGG	0.505668	4.2:+42041885	MS.gene004087:CDS
TCTTGCCACGTTTGAGATCA+GGG	0.506211	4.2:-42040867	None:intergenic
TTTAGATCCATTGTGGGTGA+TGG	0.511419	4.2:+42041919	MS.gene004087:CDS
ATTCATATTTAGATCCATTG+TGG	0.525981	4.2:+42041912	MS.gene004087:CDS
TGTTTGAGAAATGTGAGGAT+TGG	0.543506	4.2:-42041667	None:intergenic
TGGCAACTAGAAGATTGATC+AGG	0.550479	4.2:-42041647	None:intergenic
AATTGAACAAGGGTACTCAA+TGG	0.554035	4.2:+42041757	MS.gene004087:CDS
AAATATTGGTCACCAATAGG+AGG	0.555227	4.2:-42041968	None:intergenic
AAATAAGCAGAAAAGGTCCA+TGG	0.566374	4.2:+42040593	MS.gene004087:CDS
GTAAGAGTTGCAGGTTACGT+TGG	0.576254	4.2:+42040830	MS.gene004087:CDS
TCTTCATCCATCACCCACAA+TGG	0.577626	4.2:-42041926	None:intergenic
CAAGTACAAGAAATTGAACA+AGG	0.580887	4.2:+42041746	MS.gene004087:CDS
AATGCCTTCTACATCATCAT+GGG	0.580960	4.2:+42041886	MS.gene004087:CDS
TTTCCTTCTATGATCAACAA+GGG	0.589914	4.2:+42041990	MS.gene004087:CDS
CTCAAACAGTAACCATGGTG+TGG	0.595976	4.2:+42041682	MS.gene004087:CDS
AATATTGGTCACCAATAGGA+GGG	0.618360	4.2:-42041967	None:intergenic
CATTTCTCAAACAGTAACCA+TGG	0.632435	4.2:+42041677	MS.gene004087:CDS
ATGGAACTTCACTCTAAATG+GGG	0.635977	4.2:+42040916	MS.gene004087:CDS
AGAATTGCTAGAAAACTACC+AGG	0.647884	4.2:+42041527	MS.gene004087:CDS
GTTACTGTTTGAGAAATGTG+AGG	0.673513	4.2:-42041672	None:intergenic
CTTCACCCTGATCTCAAACG+TGG	0.676208	4.2:+42040862	MS.gene004087:CDS
TCAGGTGACGATGAAATCGA+AGG	0.678422	4.2:-42041629	None:intergenic
AAGTACAAGAAATTGAACAA+GGG	0.689326	4.2:+42041747	MS.gene004087:CDS
ATGAGATTAAGAATTACTGG+AGG	0.710072	4.2:+42041561	MS.gene004087:CDS
AAGCATGTGAATCCACACCA+TGG	0.747748	4.2:-42041694	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGAAAATTCTTGAATATATT+TGG	+	chr4.2:42041455-42041474	MS.gene004087:intron	15.0%
!!	AATAAATAGGTATGCTTATA+AGG	+	chr4.2:42040721-42040740	MS.gene004087:intron	20.0%
!!	ATAAATAGGTATGCTTATAA+GGG	+	chr4.2:42040722-42040741	MS.gene004087:intron	20.0%
!	AAGTACAAGAAATTGAACAA+GGG	+	chr4.2:42041747-42041766	MS.gene004087:CDS	25.0%
!	ACAATGAGATTAAGAATTAC+TGG	+	chr4.2:42041558-42041577	MS.gene004087:CDS	25.0%
!	AGAACAAGAAGATTACAAAT+TGG	+	chr4.2:42040618-42040637	MS.gene004087:CDS	25.0%
!	ATTCATATTTAGATCCATTG+TGG	+	chr4.2:42041912-42041931	MS.gene004087:CDS	25.0%
!	GATCATAGAAGGAAAAATAT+TGG	-	chr4.2:42041985-42042004	None:intergenic	25.0%
!	TGTATTTGGATATATGAAGT+AGG	-	chr4.2:42041004-42041023	None:intergenic	25.0%
!	TTCATATTTAGATCCATTGT+GGG	+	chr4.2:42041913-42041932	MS.gene004087:CDS	25.0%
!!	ACAAATTGGCATATTTTGTA+GGG	+	chr4.2:42040632-42040651	MS.gene004087:CDS	25.0%
!!	TACAAATTGGCATATTTTGT+AGG	+	chr4.2:42040631-42040650	MS.gene004087:CDS	25.0%
	AACAGAAAAACCATGGTTAA+AGG	-	chr4.2:42040777-42040796	None:intergenic	30.0%
	ACGATCAAAGAAATTGGATA+CGG	+	chr4.2:42041057-42041076	MS.gene004087:intron	30.0%
	AGAGTTACGATCAAAGAAAT+TGG	+	chr4.2:42041051-42041070	MS.gene004087:intron	30.0%
	AGCATTAATTCCTTTAACCA+TGG	+	chr4.2:42040764-42040783	MS.gene004087:intron	30.0%
	ATAACAAGTGTTTCTTCTTG+GGG	-	chr4.2:42040898-42040917	None:intergenic	30.0%
	ATGAGATTAAGAATTACTGG+AGG	+	chr4.2:42041561-42041580	MS.gene004087:CDS	30.0%
	CAAGTACAAGAAATTGAACA+AGG	+	chr4.2:42041746-42041765	MS.gene004087:CDS	30.0%
	CATAACAAGTGTTTCTTCTT+GGG	-	chr4.2:42040899-42040918	None:intergenic	30.0%
	CTTGTTCAATTTCTTGTACT+TGG	-	chr4.2:42041748-42041767	None:intergenic	30.0%
	GAAAAATATTGGTCACCAAT+AGG	-	chr4.2:42041974-42041993	None:intergenic	30.0%
	GATCTTCTATAGCTGTATTA+TGG	-	chr4.2:42041173-42041192	None:intergenic	30.0%
	TATGGAACTTCACTCTAAAT+GGG	+	chr4.2:42040915-42040934	MS.gene004087:CDS	30.0%
	TCACAAGAAATAAGCAGAAA+AGG	+	chr4.2:42040586-42040605	MS.gene004087:CDS	30.0%
	TCCATTTCGTATATTTGACA+AGG	-	chr4.2:42041195-42041214	None:intergenic	30.0%
	TCCTTGTCAAATATACGAAA+TGG	+	chr4.2:42041191-42041210	MS.gene004087:intron	30.0%
	TGATTGACATGAGATGTATT+TGG	-	chr4.2:42041018-42041037	None:intergenic	30.0%
	TTATGGAACTTCACTCTAAA+TGG	+	chr4.2:42040914-42040933	MS.gene004087:CDS	30.0%
	TTTCCTTCTATGATCAACAA+GGG	+	chr4.2:42041990-42042009	MS.gene004087:CDS	30.0%
!	GATTTTATAGCAAAGGTTTC+AGG	+	chr4.2:42040676-42040695	MS.gene004087:CDS	30.0%
!	GCATATTTTGTAGGGTTATT+TGG	+	chr4.2:42040640-42040659	MS.gene004087:CDS	30.0%
!	TAGATGGGATTTTATAGCAA+AGG	+	chr4.2:42040669-42040688	MS.gene004087:CDS	30.0%
!	TTTTCCTTCTATGATCAACA+AGG	+	chr4.2:42041989-42042008	MS.gene004087:CDS	30.0%
	AAATAAGCAGAAAAGGTCCA+TGG	+	chr4.2:42040593-42040612	MS.gene004087:CDS	35.0%
	AAATATTGGTCACCAATAGG+AGG	-	chr4.2:42041971-42041990	None:intergenic	35.0%
	AAGATGTTATTCCCTCCTAT+TGG	+	chr4.2:42041956-42041975	MS.gene004087:CDS	35.0%
	AAGGACTATTAGACTTTGAG+AGG	-	chr4.2:42041138-42041157	None:intergenic	35.0%
	AATATGGTGCTCAAACAGTA+AGG	+	chr4.2:42041084-42041103	MS.gene004087:intron	35.0%
	AATATTGGTCACCAATAGGA+GGG	-	chr4.2:42041970-42041989	None:intergenic	35.0%
	AATGCCTTCTACATCATCAT+GGG	+	chr4.2:42041886-42041905	MS.gene004087:CDS	35.0%
	AGAATTGCTAGAAAACTACC+AGG	+	chr4.2:42041527-42041546	MS.gene004087:CDS	35.0%
	ATGGAACTTCACTCTAAATG+GGG	+	chr4.2:42040916-42040935	MS.gene004087:CDS	35.0%
	CATTTCTCAAACAGTAACCA+TGG	+	chr4.2:42041677-42041696	MS.gene004087:CDS	35.0%
	CCATAACAAGTGTTTCTTCT+TGG	-	chr4.2:42040900-42040919	None:intergenic	35.0%
	GACACACATGAGAAAAAAGA+GGG	+	chr4.2:42041583-42041602	MS.gene004087:CDS	35.0%
	GGATATATGAAGTAGGTAGT+AGG	-	chr4.2:42040997-42041016	None:intergenic	35.0%
	GGTACTCAATGGATGATATA+TGG	+	chr4.2:42041768-42041787	MS.gene004087:CDS	35.0%
	GTAGGTAGTAGGAAAAGAAA+AGG	-	chr4.2:42040986-42041005	None:intergenic	35.0%
	GTTACTGTTTGAGAAATGTG+AGG	-	chr4.2:42041675-42041694	None:intergenic	35.0%
	TAATCTTCTTGTTCTGTCCA+TGG	-	chr4.2:42040613-42040632	None:intergenic	35.0%
	TAATGCCTTCTACATCATCA+TGG	+	chr4.2:42041885-42041904	MS.gene004087:CDS	35.0%
	TGTGAGAAACAGAAAAACCA+TGG	-	chr4.2:42040784-42040803	None:intergenic	35.0%
	TGTTTGAGAAATGTGAGGAT+TGG	-	chr4.2:42041670-42041689	None:intergenic	35.0%
	TTCACTCTAAATGGGGAAAT+AGG	+	chr4.2:42040923-42040942	MS.gene004087:CDS	35.0%
	TTCTTCTTCAGACTCTTTGT+TGG	-	chr4.2:42041720-42041739	None:intergenic	35.0%
!	CCAAGAAGAAACACTTGTTA+TGG	+	chr4.2:42040897-42040916	MS.gene004087:CDS	35.0%
!	GTTATTTGGTGATCGTAGAT+GGG	+	chr4.2:42040654-42040673	MS.gene004087:CDS	35.0%
!	TAATCCCATGATGATGTAGA+AGG	-	chr4.2:42041893-42041912	None:intergenic	35.0%
!	TGTTTCTCACACTTTGTTGT+AGG	+	chr4.2:42040793-42040812	MS.gene004087:intron	35.0%
!!	AATTGAACAAGGGTACTCAA+TGG	+	chr4.2:42041757-42041776	MS.gene004087:CDS	35.0%
!!	GATGATGTAGAAGGCATTAT+AGG	-	chr4.2:42041884-42041903	None:intergenic	35.0%
	AATTGGATACGGCTGCAATA+TGG	+	chr4.2:42041068-42041087	MS.gene004087:intron	40.0%
	ATCTCATTGTCTGTTCTTCC+TGG	-	chr4.2:42041548-42041567	None:intergenic	40.0%
	ATTCAAGTCCTCGCTCAAAA+GGG	+	chr4.2:42041321-42041340	MS.gene004087:intron	40.0%
	CAAGGGAACACATTTCTAAC+TGG	+	chr4.2:42042007-42042026	MS.gene004087:CDS	40.0%
	CGCGGAGACATAAAAAATTG+TGG	+	chr4.2:42041386-42041405	MS.gene004087:intron	40.0%
	CTATGTGTGATGATTGCAGA+TGG	+	chr4.2:42041501-42041520	MS.gene004087:intron	40.0%
	GGACACACATGAGAAAAAAG+AGG	+	chr4.2:42041582-42041601	MS.gene004087:CDS	40.0%
	GTTCCCTTGTTGATCATAGA+AGG	-	chr4.2:42041996-42042015	None:intergenic	40.0%
	GTTCTTCAACCTGTTCTTGA+TGG	+	chr4.2:42041824-42041843	MS.gene004087:CDS	40.0%
	GTTGTAGGTTTGAGTAGATC+AGG	+	chr4.2:42040808-42040827	MS.gene004087:intron	40.0%
	TAAGAGTTGCAGGTTACGTT+GGG	+	chr4.2:42040831-42040850	MS.gene004087:CDS	40.0%
	TCACTAGTTCCATCAAGAAC+AGG	-	chr4.2:42041836-42041855	None:intergenic	40.0%
	TGGCAACTAGAAGATTGATC+AGG	-	chr4.2:42041650-42041669	None:intergenic	40.0%
	TTTAGATCCATTGTGGGTGA+TGG	+	chr4.2:42041919-42041938	MS.gene004087:CDS	40.0%
!	GGTTATTTGGTGATCGTAGA+TGG	+	chr4.2:42040653-42040672	MS.gene004087:CDS	40.0%
!!	AAAGGTTTCAGGTTTGAAGG+TGG	+	chr4.2:42040687-42040706	MS.gene004087:intron	40.0%
!!	AGCAAAGGTTTCAGGTTTGA+AGG	+	chr4.2:42040684-42040703	MS.gene004087:intron	40.0%
!!	ATTATGGTGCTGCAACTGTA+AGG	-	chr4.2:42041157-42041176	None:intergenic	40.0%
	AAGCATGTGAATCCACACCA+TGG	-	chr4.2:42041697-42041716	None:intergenic	45.0%
	CTCAAACAGTAACCATGGTG+TGG	+	chr4.2:42041682-42041701	MS.gene004087:CDS	45.0%
	GATTCAAGTCCTCGCTCAAA+AGG	+	chr4.2:42041320-42041339	MS.gene004087:intron	45.0%
	GGCGGGAGAGAGTAATAAAT+AGG	+	chr4.2:42040708-42040727	MS.gene004087:intron	45.0%
	GTAAGAGTTGCAGGTTACGT+TGG	+	chr4.2:42040830-42040849	MS.gene004087:CDS	45.0%
	GTAGATCAGGTAAGAGTTGC+AGG	+	chr4.2:42040821-42040840	MS.gene004087:CDS	45.0%
	TCAGGTGACGATGAAATCGA+AGG	-	chr4.2:42041632-42041651	None:intergenic	45.0%
	TCTTCATCCATCACCCACAA+TGG	-	chr4.2:42041929-42041948	None:intergenic	45.0%
	TGGTGCTCAAACAGTAAGGA+CGG	+	chr4.2:42041088-42041107	MS.gene004087:intron	45.0%
	TTCAAGTCCTCGCTCAAAAG+GGG	+	chr4.2:42041322-42041341	MS.gene004087:intron	45.0%
!	ATCTTGCCACGTTTGAGATC+AGG	-	chr4.2:42040871-42040890	None:intergenic	45.0%
!	CATGAGAAAAAAGAGGGCAC+AGG	+	chr4.2:42041589-42041608	MS.gene004087:CDS	45.0%
!	TCTTGCCACGTTTGAGATCA+GGG	-	chr4.2:42040870-42040889	None:intergenic	45.0%
	ACTTGAATCCTCTACGGCAG+CGG	-	chr4.2:42041309-42041328	None:intergenic	50.0%
	ATTGCAGTACAGTGCTGCAG+CGG	+	chr4.2:42041225-42041244	MS.gene004087:intron	50.0%
	CTTCACCCTGATCTCAAACG+TGG	+	chr4.2:42040862-42040881	MS.gene004087:CDS	50.0%
	GCGAGGACTTGAATCCTCTA+CGG	-	chr4.2:42041315-42041334	None:intergenic	50.0%
	TGATGACCGTGATTGTGCTG+TGG	+	chr4.2:42041354-42041373	MS.gene004087:intron	50.0%
	TTTATGTCTCCGCGACTCCA+AGG	-	chr4.2:42041380-42041399	None:intergenic	50.0%
!!	GGTTTCAGGTTTGAAGGTGG+CGG	+	chr4.2:42040690-42040709	MS.gene004087:intron	50.0%
!!	GTTTCAGGTTTGAAGGTGGC+GGG	+	chr4.2:42040691-42040710	MS.gene004087:intron	50.0%
	CCAAGGCCACAGCACAATCA+CGG	-	chr4.2:42041363-42041382	None:intergenic	55.0%
!	GCATAAGCCCCTTTTGAGCG+AGG	-	chr4.2:42041332-42041351	None:intergenic	55.0%
	CCGTGATTGTGCTGTGGCCT+TGG	+	chr4.2:42041360-42041379	MS.gene004087:intron	60.0%
	CTCTACTACCGCTGCCGTAG+AGG	+	chr4.2:42041298-42041317	MS.gene004087:intron	60.0%
!	GTGCTGTGGCCTTGGAGTCG+CGG	+	chr4.2:42041368-42041387	MS.gene004087:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	42040580	42042033	42040580	ID=MS.gene004087
chr4.2	mRNA	42040580	42042033	42040580	ID=MS.gene004087.t1;Parent=MS.gene004087
chr4.2	exon	42040580	42040697	42040580	ID=MS.gene004087.t1.exon1;Parent=MS.gene004087.t1
chr4.2	CDS	42040580	42040697	42040580	ID=cds.MS.gene004087.t1;Parent=MS.gene004087.t1
chr4.2	exon	42040815	42040944	42040815	ID=MS.gene004087.t1.exon2;Parent=MS.gene004087.t1
chr4.2	CDS	42040815	42040944	42040815	ID=cds.MS.gene004087.t1;Parent=MS.gene004087.t1
chr4.2	exon	42041520	42042033	42041520	ID=MS.gene004087.t1.exon3;Parent=MS.gene004087.t1
chr4.2	CDS	42041520	42042033	42041520	ID=cds.MS.gene004087.t1;Parent=MS.gene004087.t1

Gene Sequence

>MS.gene004087

ATGGTTTCACAAGAAATAAGCAGAAAAGGTCCATGGACAGAACAAGAAGATTACAAATTGGCATATTTTGTAGGGTTATTTGGTGATCGTAGATGGGATTTTATAGCAAAGGTTTCAGGTTTGAAGGTGGCGGGAGAGAGTAATAAATAGGTATGCTTATAAGGGCATGCTGAATTATAATAGAAGCATTAATTCCTTTAACCATGGTTTTTCTGTTTCTCACACTTTGTTGTAGGTTTGAGTAGATCAGGTAAGAGTTGCAGGTTACGTTGGGTTAATTATCTTCACCCTGATCTCAAACGTGGCAAGATGACACCCCAAGAAGAAACACTTGTTATGGAACTTCACTCTAAATGGGGAAATAGGTTTGAGACTGAATATTATCAAGCAGACTCACTATTTTCCTTTTCTTTTCCTACTACCTACTTCATATATCCAAATACATCTCATGTCAATCATAAAGTATTCGTGAGAGTTACGATCAAAGAAATTGGATACGGCTGCAATATGGTGCTCAAACAGTAAGGACGGTTAGATTTACAGAGAAGTTTTTTTCCTCTCAAAGTCTAATAGTCCTTACAGTTGCAGCACCATAATACAGCTATAGAAGATCCTTGTCAAATATACGAAATGGAATCGTCTACAATTGCAGTACAGTGCTGCAGCGGTAAGTACTATTAGATTTATAGAGAAATTTTCTCTCTCTAAATCTAATAGTCTCTACTACCGCTGCCGTAGAGGATTCAAGTCCTCGCTCAAAAGGGGCTTATGCAGTGATGACCGTGATTGTGCTGTGGCCTTGGAGTCGCGGAGACATAAAAAATTGTGGTGTCTGATCTAGTTTGTCGTCGCATACTTTTCATTTTTTATTTTTATGAAAATTCTTGAATATATTTGGTTACTCAAGTTTCATTGACGTAGCTATGTGTGATGATTGCAGATGGTCAAGAATTGCTAGAAAACTACCAGGAAGAACAGACAATGAGATTAAGAATTACTGGAGGACACACATGAGAAAAAAGAGGGCACAGGAGAAAAAACATGCAACACCTTCGATTTCATCGTCACCTGATCAATCTTCTAGTTGCCAATCCTCACATTTCTCAAACAGTAACCATGGTGTGGATTCACATGCTTCCAACAAAGAGTCTGAAGAAGAAAATTACCAAGTACAAGAAATTGAACAAGGGTACTCAATGGATGATATATGGAAAGATATTGCTATGTCTGAAGATGACATCAATGTTCTTCAACCTGTTCTTGATGGAACTAGTGAAGAGAATAGTAATAATTTATCTTGTCCTATAATGCCTTCTACATCATCATGGGATTATTCATATTTAGATCCATTGTGGGTGATGGATGAAGAAGAAAGCAAGATGTTATTCCCTCCTATTGGTGACCAATATTTTTCCTTCTATGATCAACAAGGGAACACATTTCTAACTGGTTAA

Protein sequence

>MS.gene004087.t1

MVSQEISRKGPWTEQEDYKLAYFVGLFGDRRWDFIAKVSGLSRSGKSCRLRWVNYLHPDLKRGKMTPQEETLVMELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKRAQEKKHATPSISSSPDQSSSCQSSHFSNSNHGVDSHASNKESEEENYQVQEIEQGYSMDDIWKDIAMSEDDINVLQPVLDGTSEENSNNLSCPIMPSTSSWDYSYLDPLWVMDEEESKMLFPPIGDQYFSFYDQQGNTFLTG