Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004470.t1 | XP_003594006.1 | 84.7 | 393 | 2 | 1 | 1 | 335 | 1 | 393 | 3.30E-185 | 657.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004470.t1 | Q8VY21 | 61.6 | 383 | 82 | 4 | 12 | 335 | 30 | 406 | 4.7e-132 | 472.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004470.t1 | G7ISK0 | 84.7 | 393 | 2 | 1 | 1 | 335 | 1 | 393 | 2.4e-185 | 657.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene004470.t1 | TF | TUB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004470.t1 | MTR_2g020280 | 82.952 | 393 | 9 | 2 | 1 | 335 | 1 | 393 | 0.0 | 653 |
| MS.gene004470.t1 | MTR_2g020280 | 90.785 | 293 | 23 | 1 | 43 | 335 | 6 | 294 | 0.0 | 550 |
| MS.gene004470.t1 | MTR_1g088960 | 57.772 | 386 | 98 | 7 | 11 | 335 | 21 | 402 | 6.43e-150 | 427 |
| MS.gene004470.t1 | MTR_2g007930 | 48.031 | 381 | 117 | 8 | 34 | 335 | 49 | 427 | 4.56e-112 | 332 |
| MS.gene004470.t1 | MTR_1g098790 | 58.099 | 284 | 96 | 4 | 75 | 335 | 148 | 431 | 1.64e-110 | 328 |
| MS.gene004470.t1 | MTR_5g020580 | 48.000 | 375 | 118 | 7 | 32 | 335 | 48 | 416 | 9.00e-108 | 321 |
| MS.gene004470.t1 | MTR_1g022370 | 48.611 | 360 | 115 | 7 | 39 | 335 | 70 | 422 | 9.61e-105 | 313 |
| MS.gene004470.t1 | MTR_8g077195 | 59.398 | 266 | 99 | 3 | 77 | 335 | 149 | 412 | 3.04e-102 | 306 |
| MS.gene004470.t1 | MTR_2g076200 | 53.585 | 265 | 92 | 5 | 74 | 335 | 135 | 371 | 1.45e-89 | 273 |
| MS.gene004470.t1 | MTR_2g076210 | 47.566 | 267 | 106 | 8 | 74 | 335 | 130 | 367 | 2.34e-66 | 213 |
| MS.gene004470.t1 | MTR_8g077650 | 37.059 | 340 | 166 | 12 | 1 | 327 | 24 | 328 | 4.54e-52 | 175 |
| MS.gene004470.t1 | MTR_8g077675 | 41.762 | 261 | 134 | 9 | 77 | 328 | 144 | 395 | 4.32e-50 | 172 |
| MS.gene004470.t1 | MTR_8g077620 | 40.304 | 263 | 124 | 9 | 74 | 326 | 145 | 384 | 2.81e-48 | 167 |
| MS.gene004470.t1 | MTR_8g077640 | 28.613 | 346 | 131 | 11 | 39 | 325 | 95 | 383 | 1.88e-27 | 111 |
| MS.gene004470.t1 | MTR_2g105390 | 53.226 | 62 | 22 | 2 | 273 | 334 | 305 | 359 | 7.98e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004470.t1 | AT2G47900 | 60.156 | 384 | 87 | 5 | 12 | 335 | 30 | 407 | 7.89e-155 | 440 |
| MS.gene004470.t1 | AT2G47900 | 60.836 | 383 | 85 | 6 | 12 | 335 | 30 | 406 | 2.30e-154 | 439 |
| MS.gene004470.t1 | AT2G47900 | 60.836 | 383 | 85 | 6 | 12 | 335 | 30 | 406 | 2.30e-154 | 439 |
| MS.gene004470.t1 | AT3G06380 | 48.980 | 392 | 126 | 9 | 4 | 335 | 3 | 380 | 1.80e-114 | 337 |
| MS.gene004470.t1 | AT5G18680 | 48.635 | 403 | 120 | 12 | 4 | 335 | 3 | 389 | 2.64e-113 | 334 |
| MS.gene004470.t1 | AT3G06380 | 62.879 | 264 | 88 | 5 | 73 | 335 | 34 | 288 | 8.28e-109 | 319 |
| MS.gene004470.t1 | AT5G18680 | 61.172 | 273 | 79 | 7 | 74 | 335 | 41 | 297 | 2.99e-108 | 318 |
| MS.gene004470.t1 | AT1G25280 | 47.342 | 395 | 112 | 9 | 34 | 335 | 54 | 445 | 8.79e-104 | 311 |
| MS.gene004470.t1 | AT1G43640 | 42.857 | 385 | 132 | 9 | 34 | 335 | 50 | 429 | 7.45e-100 | 301 |
| MS.gene004470.t1 | AT2G18280 | 46.175 | 366 | 122 | 8 | 32 | 335 | 41 | 393 | 1.15e-99 | 300 |
| MS.gene004470.t1 | AT2G18280 | 46.175 | 366 | 122 | 8 | 32 | 335 | 41 | 393 | 1.15e-99 | 300 |
| MS.gene004470.t1 | AT1G76900 | 43.541 | 418 | 122 | 10 | 25 | 335 | 45 | 455 | 4.55e-98 | 297 |
| MS.gene004470.t1 | AT1G76900 | 43.541 | 418 | 122 | 10 | 25 | 335 | 45 | 455 | 4.55e-98 | 297 |
| MS.gene004470.t1 | AT1G76900 | 43.541 | 418 | 122 | 10 | 25 | 335 | 45 | 455 | 4.55e-98 | 297 |
| MS.gene004470.t1 | AT1G43640 | 52.281 | 285 | 107 | 7 | 75 | 335 | 84 | 363 | 4.46e-96 | 289 |
| MS.gene004470.t1 | AT1G25280 | 55.556 | 270 | 83 | 7 | 100 | 335 | 1 | 267 | 1.50e-92 | 277 |
| MS.gene004470.t1 | AT1G25280 | 55.556 | 270 | 83 | 7 | 100 | 335 | 1 | 267 | 1.50e-92 | 277 |
| MS.gene004470.t1 | AT1G53320 | 53.558 | 267 | 95 | 4 | 74 | 335 | 137 | 379 | 9.61e-90 | 273 |
| MS.gene004470.t1 | AT1G47270 | 53.731 | 268 | 97 | 5 | 76 | 335 | 140 | 388 | 5.10e-89 | 272 |
| MS.gene004470.t1 | AT1G47270 | 53.731 | 268 | 97 | 5 | 76 | 335 | 165 | 413 | 7.75e-89 | 272 |
| MS.gene004470.t1 | AT1G47270 | 53.731 | 268 | 97 | 5 | 76 | 335 | 164 | 412 | 7.94e-89 | 272 |
| MS.gene004470.t1 | AT1G61940 | 35.565 | 239 | 92 | 10 | 42 | 279 | 1 | 178 | 7.78e-25 | 101 |
Find 86 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACCCTATTTCGGCGTTTC+AGG | 0.176930 | 2.4:+66574668 | MS.gene004470:CDS |
| AATGCCTGAAACGCCGAAAT+AGG | 0.212680 | 2.4:-66574672 | None:intergenic |
| GATAAGATTATTCTGCAATT+TGG | 0.220956 | 2.4:+66574609 | MS.gene004470:CDS |
| TGGCGGTTGGCGACAGTTTA+CGG | 0.281341 | 2.4:+66571381 | MS.gene004470:CDS |
| CTCTTATTCACAAGCAATCT+TGG | 0.300510 | 2.4:-66574721 | None:intergenic |
| ATTCTGCAATTTGGAAAAGT+TGG | 0.358632 | 2.4:+66574618 | MS.gene004470:CDS |
| CTGGTGGCTTCCGCAGAAAA+TGG | 0.369954 | 2.4:+66574567 | MS.gene004470:CDS |
| AGTAGTGGTGGTGGCGGAGA+AGG | 0.373376 | 2.4:+66571349 | MS.gene004470:CDS |
| GGATTTCCGATACCCTATTT+CGG | 0.388100 | 2.4:+66574659 | MS.gene004470:CDS |
| TCCTTAAGATCAAATTTCCT+TGG | 0.391394 | 2.4:+66573667 | MS.gene004470:intron |
| AACATAGTTGTTGCTTCCCC+TGG | 0.398674 | 2.4:-66573541 | None:intergenic |
| TAGTTGCCTGTTGGGACCTT+GGG | 0.403395 | 2.4:-66573787 | None:intergenic |
| ATGCCTGAAACGCCGAAATA+GGG | 0.407311 | 2.4:-66574671 | None:intergenic |
| ACAGTTTACGGCAGAGTTGT+TGG | 0.415866 | 2.4:+66571393 | MS.gene004470:CDS |
| TTCTGCAATTTGGAAAAGTT+GGG | 0.417811 | 2.4:+66574619 | MS.gene004470:CDS |
| TCTCTATCCGGACCTCTTGT+TGG | 0.419329 | 2.4:+66574423 | MS.gene004470:CDS |
| TGATGACGGGAAGTTCCTTC+TGG | 0.420704 | 2.4:+66573452 | MS.gene004470:CDS |
| ATAGTTGCCTGTTGGGACCT+TGG | 0.425411 | 2.4:-66573788 | None:intergenic |
| TTACTAAAAGTCGTTCTACT+AGG | 0.428715 | 2.4:+66573740 | MS.gene004470:CDS |
| CCACTGGATAGTTGCCTGTT+GGG | 0.432338 | 2.4:-66573795 | None:intergenic |
| CAGTTTACGGCAGAGTTGTT+GGG | 0.438166 | 2.4:+66571394 | MS.gene004470:CDS |
| AAGAACGTTGTTGCGTGTGC+TGG | 0.445764 | 2.4:+66571491 | MS.gene004470:CDS |
| TTGCTCCTGCATGAGGTGGC+TGG | 0.453181 | 2.4:-66573714 | None:intergenic |
| GGCATGAGCAGCTGCAGTGT+TGG | 0.476628 | 2.4:+66574493 | MS.gene004470:CDS |
| TCCGCAGAAAATGGAACAGC+TGG | 0.477339 | 2.4:+66574576 | MS.gene004470:CDS |
| GGGGAAGCAACAACTATGTT+GGG | 0.477342 | 2.4:+66573544 | MS.gene004470:CDS |
| GTTTCACCCAAGGTCCCAAC+AGG | 0.477369 | 2.4:+66573781 | MS.gene004470:CDS |
| AGAATAATCTTATCGTGTTC+CGG | 0.487652 | 2.4:-66574600 | None:intergenic |
| TCTTCTCCGAATTGAGGCCT+CGG | 0.497256 | 2.4:+66571448 | MS.gene004470:CDS |
| TGAAGTTCTTCTCCGAATTG+AGG | 0.501294 | 2.4:+66571442 | MS.gene004470:CDS |
| TGGGAAGGATTTGTTTACAA+TGG | 0.502527 | 2.4:+66574638 | MS.gene004470:CDS |
| GACGGCCAGCCACCTCATGC+AGG | 0.508409 | 2.4:+66573709 | MS.gene004470:CDS |
| AGGGGAAGCAACAACTATGT+TGG | 0.508852 | 2.4:+66573543 | MS.gene004470:CDS |
| AGAAAATGGAACAGCTGGAC+CGG | 0.509425 | 2.4:+66574581 | MS.gene004470:CDS |
| TTTATCGCCAACAAGAGGTC+CGG | 0.512577 | 2.4:-66574430 | None:intergenic |
| TAAAAGTCGTTCTACTAGGT+TGG | 0.514151 | 2.4:+66573744 | MS.gene004470:CDS |
| TGCAGCTGCTCATGCCACCT+CGG | 0.519909 | 2.4:-66574486 | None:intergenic |
| AATTAAATGTGCTAGGCTCT+AGG | 0.520129 | 2.4:+66573833 | MS.gene004470:CDS |
| ACAACTATGTTGGGAAATTG+AGG | 0.521031 | 2.4:+66573553 | MS.gene004470:CDS |
| TAGACGCAGATGATATGTCC+AGG | 0.522084 | 2.4:+66573523 | MS.gene004470:CDS |
| GTGGTAGAGAACTCTCTATC+CGG | 0.528357 | 2.4:+66574411 | MS.gene004470:CDS |
| ATGACACAGTGCATTCTCCT+TGG | 0.528561 | 2.4:-66574267 | None:intergenic |
| TAGGTTGGTGAATCTAAAGC+AGG | 0.531070 | 2.4:+66573759 | MS.gene004470:CDS |
| TCATGTCTTCGATTATGTTG+CGG | 0.535725 | 2.4:-66571310 | None:intergenic |
| TTCGATTGAAGAGGATGGAA+TGG | 0.537253 | 2.4:-66574295 | None:intergenic |
| AGATAGTGAACTTTGTTCCA+AGG | 0.538026 | 2.4:-66573684 | None:intergenic |
| TGTCCTCCGAGGCCTCAATT+CGG | 0.540412 | 2.4:-66571454 | None:intergenic |
| ATTCAGCGCTAGGTGATGAC+GGG | 0.542238 | 2.4:+66573439 | MS.gene004470:intron |
| AGAGAAAACTCAGTTTGTGT+AGG | 0.543872 | 2.4:-66574333 | None:intergenic |
| AATTCAGCGCTAGGTGATGA+CGG | 0.546541 | 2.4:+66573438 | MS.gene004470:intron |
| AAGGAGAATGCACTGTGTCA+TGG | 0.546764 | 2.4:+66574269 | MS.gene004470:CDS |
| ATGATATAATCTGTGCATGT+AGG | 0.547626 | 2.4:-66573495 | None:intergenic |
| GCCACTGGATAGTTGCCTGT+TGG | 0.548446 | 2.4:-66573796 | None:intergenic |
| TCATATGAGATGTGAGCCAC+TGG | 0.549162 | 2.4:-66573811 | None:intergenic |
| TGTGTAGGAGCTACGCCACC+TGG | 0.549577 | 2.4:-66574318 | None:intergenic |
| GCAATTTGGAAAAGTTGGGA+AGG | 0.553649 | 2.4:+66574623 | MS.gene004470:CDS |
| ACTTCACGCAGAAGCTCTTG+TGG | 0.562675 | 2.4:-66571425 | None:intergenic |
| CCATCCTCTTCAATCGAACC+AGG | 0.562739 | 2.4:+66574300 | MS.gene004470:CDS |
| CACGCAACAACGTTCTTCCT+CGG | 0.565317 | 2.4:-66571485 | None:intergenic |
| GGCGGAGAAGGAAGAGAAAG+TGG | 0.570148 | 2.4:+66571361 | MS.gene004470:CDS |
| TCATATGAATTAAATGTGCT+AGG | 0.570586 | 2.4:+66573826 | MS.gene004470:CDS |
| CCTGGTTCGATTGAAGAGGA+TGG | 0.573458 | 2.4:-66574300 | None:intergenic |
| TACATTTGCGTGCAGCCAGA+AGG | 0.580300 | 2.4:-66573467 | None:intergenic |
| TGGACGGGTGACAATTGCCT+CGG | 0.581243 | 2.4:+66574530 | MS.gene004470:CDS |
| AAGGAAGAGAAAGTGGCGGT+TGG | 0.582497 | 2.4:+66571368 | MS.gene004470:CDS |
| ATCGCAAAGAGTAGTGGTGG+TGG | 0.589679 | 2.4:+66571340 | MS.gene004470:CDS |
| CGGAGGACACGTGGCCGCCG+AGG | 0.594437 | 2.4:+66571468 | MS.gene004470:CDS |
| GCAAAGAGTAGTGGTGGTGG+CGG | 0.599034 | 2.4:+66571343 | MS.gene004470:CDS |
| CTTGTTGGCGATAAAAGAGA+TGG | 0.602960 | 2.4:+66574438 | MS.gene004470:CDS |
| CCGATCAAAATCAAATCGTG+TGG | 0.606213 | 2.4:+66574392 | MS.gene004470:CDS |
| TTGAGGCCTCGGAGGACACG+TGG | 0.607574 | 2.4:+66571459 | MS.gene004470:CDS |
| GAAACGCCGAAATAGGGTAT+CGG | 0.608647 | 2.4:-66574665 | None:intergenic |
| GCCACCTGGTTCGATTGAAG+AGG | 0.610396 | 2.4:-66574304 | None:intergenic |
| AGACGCAGATGATATGTCCA+GGG | 0.615218 | 2.4:+66573524 | MS.gene004470:CDS |
| ATCAAGATCGCAAAGAGTAG+TGG | 0.616284 | 2.4:+66571334 | MS.gene004470:CDS |
| ACAAAGTTCACTATCTATGA+CGG | 0.627271 | 2.4:+66573691 | MS.gene004470:CDS |
| TCTAAAGCAGGTTTCACCCA+AGG | 0.631576 | 2.4:+66573771 | MS.gene004470:CDS |
| TCTCCGAATTGAGGCCTCGG+AGG | 0.639401 | 2.4:+66571451 | MS.gene004470:CDS |
| AAGATCGCAAAGAGTAGTGG+TGG | 0.644592 | 2.4:+66571337 | MS.gene004470:CDS |
| CGGCGGCCACGTGTCCTCCG+AGG | 0.663112 | 2.4:-66571465 | None:intergenic |
| TCTTGGTATCAAAGCTGCTG+AGG | 0.664183 | 2.4:-66574704 | None:intergenic |
| CCCAACAGGCAACTATCCAG+TGG | 0.669323 | 2.4:+66573795 | MS.gene004470:CDS |
| TCCTCTTCAATCGAACCAGG+TGG | 0.710835 | 2.4:+66574303 | MS.gene004470:CDS |
| GACGCAGATGATATGTCCAG+GGG | 0.717675 | 2.4:+66573525 | MS.gene004470:CDS |
| GCAACAACGTTCTTCCTCGG+CGG | 0.717767 | 2.4:-66571482 | None:intergenic |
| GGAGAAGGAAGAGAAAGTGG+CGG | 0.735942 | 2.4:+66571364 | MS.gene004470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTAATACTAAATTACTA+AGG | - | chr2.4:66573169-66573188 | None:intergenic | 15.0% |
| !! | ATATAATTATGTGGATATAA+TGG | - | chr2.4:66572418-66572437 | None:intergenic | 15.0% |
| !! | ATATAGAACATATAATTATG+TGG | - | chr2.4:66572427-66572446 | None:intergenic | 15.0% |
| !! | TTAAAAAAGTGATTTATGTT+TGG | + | chr2.4:66571743-66571762 | MS.gene004470:intron | 15.0% |
| !! | TTAAGGAAGAATAAAAAAAA+AGG | - | chr2.4:66573654-66573673 | None:intergenic | 15.0% |
| !!! | ACAAAAGTATAAAACAATAA+CGG | - | chr2.4:66573607-66573626 | None:intergenic | 15.0% |
| !! | AAACAAATAATATGTTTGAG+TGG | - | chr2.4:66573299-66573318 | None:intergenic | 20.0% |
| !! | AACTTAATATCACAATTTAG+TGG | - | chr2.4:66572467-66572486 | None:intergenic | 20.0% |
| !! | ATAAAAATAACAGATCCAAT+GGG | - | chr2.4:66572259-66572278 | None:intergenic | 20.0% |
| !! | ATTGTTTAGATATTGTGTAA+AGG | + | chr2.4:66571794-66571813 | MS.gene004470:intron | 20.0% |
| !! | ATTTAGCATGATTAATTGTT+TGG | + | chr2.4:66571898-66571917 | MS.gene004470:intron | 20.0% |
| !! | TACTTAATAGAGTTACATAT+TGG | - | chr2.4:66572179-66572198 | None:intergenic | 20.0% |
| !! | TATAAAAATAACAGATCCAA+TGG | - | chr2.4:66572260-66572279 | None:intergenic | 20.0% |
| !!! | ACCAAATTTTATGTTTATCT+TGG | + | chr2.4:66571992-66572011 | MS.gene004470:intron | 20.0% |
| !!! | AGTGTGAAAAATTGTTATTT+TGG | + | chr2.4:66572332-66572351 | MS.gene004470:intron | 20.0% |
| !!! | ATGTTATTAATGGATAATGT+AGG | + | chr2.4:66572362-66572381 | MS.gene004470:intron | 20.0% |
| !!! | TGAAAAATTGTTATTTTGGT+TGG | + | chr2.4:66572336-66572355 | MS.gene004470:intron | 20.0% |
| !!! | TGTTATTAATGGATAATGTA+GGG | + | chr2.4:66572363-66572382 | MS.gene004470:intron | 20.0% |
| ! | AAAACCTGTTTAACAGAAAT+GGG | - | chr2.4:66571590-66571609 | None:intergenic | 25.0% |
| ! | ATGATGATTGAATATGACTA+TGG | + | chr2.4:66573093-66573112 | MS.gene004470:intron | 25.0% |
| ! | ATGATTAATTGTTTGGATGA+GGG | + | chr2.4:66571905-66571924 | MS.gene004470:intron | 25.0% |
| ! | CATATCAACAACAAAGAATA+TGG | - | chr2.4:66572943-66572962 | None:intergenic | 25.0% |
| ! | CCATATTCTCAAATTATTAC+CGG | + | chr2.4:66572831-66572850 | MS.gene004470:intron | 25.0% |
| ! | GATAAGATTATTCTGCAATT+TGG | + | chr2.4:66574609-66574628 | MS.gene004470:CDS | 25.0% |
| ! | GCCAAGATAAACATAAAATT+TGG | - | chr2.4:66571996-66572015 | None:intergenic | 25.0% |
| ! | GTGAGTATACAATTAATCTT+TGG | + | chr2.4:66573335-66573354 | MS.gene004470:intron | 25.0% |
| ! | TAATTGAATGTAACATGTGT+CGG | - | chr2.4:66572809-66572828 | None:intergenic | 25.0% |
| ! | TACCAAATAACAAAGAAACA+AGG | - | chr2.4:66571952-66571971 | None:intergenic | 25.0% |
| ! | TATGGAAGTAATTGAGAATA+TGG | - | chr2.4:66572907-66572926 | None:intergenic | 25.0% |
| ! | TATGTTCTATATTATCTGAG+AGG | + | chr2.4:66572435-66572454 | MS.gene004470:intron | 25.0% |
| ! | TCATATGAATTAAATGTGCT+AGG | + | chr2.4:66573826-66573845 | MS.gene004470:CDS | 25.0% |
| ! | TGTCGAACAAAATAAAAGTA+TGG | - | chr2.4:66574141-66574160 | None:intergenic | 25.0% |
| !! | AATTTTCCTAACCAAAAAGT+AGG | + | chr2.4:66572964-66572983 | MS.gene004470:intron | 25.0% |
| !! | AGCACAAAATATCTAGAATT+AGG | - | chr2.4:66572395-66572414 | None:intergenic | 25.0% |
| !! | TGGATTTGGTTGTTTATAAT+GGG | + | chr2.4:66571829-66571848 | MS.gene004470:intron | 25.0% |
| !! | TTGGATTTGGTTGTTTATAA+TGG | + | chr2.4:66571828-66571847 | MS.gene004470:intron | 25.0% |
| !! | TTTACCTAACATGTTTCTAT+TGG | + | chr2.4:66573208-66573227 | MS.gene004470:intron | 25.0% |
| !! | TTTCTATTGGCGAATAATTT+TGG | + | chr2.4:66573221-66573240 | MS.gene004470:intron | 25.0% |
| !!! | AATTATGTTTTGGTTGAGTA+CGG | + | chr2.4:66572724-66572743 | MS.gene004470:intron | 25.0% |
| !!! | TACCTTGTTTCTTTGTTATT+TGG | + | chr2.4:66571947-66571966 | MS.gene004470:intron | 25.0% |
| !!! | TGATTTTGTAGCATTGATTT+TGG | + | chr2.4:66571720-66571739 | MS.gene004470:intron | 25.0% |
| !!! | TTTGATTTTGATCGGAAAAA+AGG | - | chr2.4:66574387-66574406 | None:intergenic | 25.0% |
| AAACCTGTTTAACAGAAATG+GGG | - | chr2.4:66571589-66571608 | None:intergenic | 30.0% | |
| AAAGCGATAGAAAATGAGAA+TGG | - | chr2.4:66571621-66571640 | None:intergenic | 30.0% | |
| AATAATATGTTTGAGTGGAC+CGG | - | chr2.4:66573294-66573313 | None:intergenic | 30.0% | |
| AATATGACTATGTTGTGGAA+GGG | + | chr2.4:66573103-66573122 | MS.gene004470:intron | 30.0% | |
| ACAAAGTTCACTATCTATGA+CGG | + | chr2.4:66573691-66573710 | MS.gene004470:CDS | 30.0% | |
| ACTATCTATATATTGCAAGC+AGG | + | chr2.4:66574241-66574260 | MS.gene004470:intron | 30.0% | |
| AGAATAATCTTATCGTGTTC+CGG | - | chr2.4:66574603-66574622 | None:intergenic | 30.0% | |
| ATGATATAATCTGTGCATGT+AGG | - | chr2.4:66573498-66573517 | None:intergenic | 30.0% | |
| ATTCTGCAATTTGGAAAAGT+TGG | + | chr2.4:66574618-66574637 | MS.gene004470:CDS | 30.0% | |
| ATTTATGTTTGGATGCTTTG+AGG | + | chr2.4:66571754-66571773 | MS.gene004470:intron | 30.0% | |
| CAACTTGTGAAACTTTACAT+GGG | + | chr2.4:66572490-66572509 | MS.gene004470:intron | 30.0% | |
| CATGATTAATTGTTTGGATG+AGG | + | chr2.4:66571904-66571923 | MS.gene004470:intron | 30.0% | |
| CCGGTAATAATTTGAGAATA+TGG | - | chr2.4:66572834-66572853 | None:intergenic | 30.0% | |
| CTATCTATATATTGCAAGCA+GGG | + | chr2.4:66574242-66574261 | MS.gene004470:intron | 30.0% | |
| GAAAACCTGTTTAACAGAAA+TGG | - | chr2.4:66571591-66571610 | None:intergenic | 30.0% | |
| GAATATGGAAAACACAAACA+CGG | - | chr2.4:66572892-66572911 | None:intergenic | 30.0% | |
| GATTGAATATGACTATGTTG+TGG | + | chr2.4:66573098-66573117 | MS.gene004470:intron | 30.0% | |
| GTAAATGTAAACATACACAG+AGG | - | chr2.4:66572237-66572256 | None:intergenic | 30.0% | |
| GTATGTTTACATTTACCCAT+TGG | + | chr2.4:66572241-66572260 | MS.gene004470:intron | 30.0% | |
| TAAAAGACATTGAAATGACC+AGG | + | chr2.4:66572533-66572552 | MS.gene004470:intron | 30.0% | |
| TAATAACCAGAAACAAAACC+TGG | - | chr2.4:66572554-66572573 | None:intergenic | 30.0% | |
| TATCTATATATTGCAAGCAG+GGG | + | chr2.4:66574243-66574262 | MS.gene004470:intron | 30.0% | |
| TATGCTTGTGTTGAAAAACA+AGG | + | chr2.4:66574461-66574480 | MS.gene004470:CDS | 30.0% | |
| TCAACTTGTGAAACTTTACA+TGG | + | chr2.4:66572489-66572508 | MS.gene004470:intron | 30.0% | |
| TCCAAGGAAATTTGATCTTA+AGG | - | chr2.4:66573671-66573690 | None:intergenic | 30.0% | |
| TCCTTAAGATCAAATTTCCT+TGG | + | chr2.4:66573667-66573686 | MS.gene004470:intron | 30.0% | |
| TCTATATTATCTGAGAGGTT+GGG | + | chr2.4:66572440-66572459 | MS.gene004470:intron | 30.0% | |
| TTAAAGAAGCAATGACCAAA+AGG | - | chr2.4:66573420-66573439 | None:intergenic | 30.0% | |
| TTACTAAAAGTCGTTCTACT+AGG | + | chr2.4:66573740-66573759 | MS.gene004470:CDS | 30.0% | |
| TTCTATATTATCTGAGAGGT+TGG | + | chr2.4:66572439-66572458 | MS.gene004470:intron | 30.0% | |
| TTCTGCAATTTGGAAAAGTT+GGG | + | chr2.4:66574619-66574638 | MS.gene004470:CDS | 30.0% | |
| TTGATGCATTGAGGTTAATT+GGG | + | chr2.4:66571862-66571881 | MS.gene004470:intron | 30.0% | |
| TTTGATGCATTGAGGTTAAT+TGG | + | chr2.4:66571861-66571880 | MS.gene004470:intron | 30.0% | |
| ! | GCTGGGATATAATTATGTTT+TGG | + | chr2.4:66572714-66572733 | MS.gene004470:intron | 30.0% |
| ! | GGTCATTTCAATGTCTTTTA+AGG | - | chr2.4:66572533-66572552 | None:intergenic | 30.0% |
| ! | TGGTTGGTCAATGTTATTAA+TGG | + | chr2.4:66572352-66572371 | MS.gene004470:intron | 30.0% |
| !! | AGATTTTGTTTGATGCATTG+AGG | + | chr2.4:66571853-66571872 | MS.gene004470:intron | 30.0% |
| !! | CTTACTTTTATCACAACGAT+CGG | + | chr2.4:66573977-66573996 | MS.gene004470:intron | 30.0% |
| !! | TAATGGATAATGTAGGGTTT+TGG | + | chr2.4:66572369-66572388 | MS.gene004470:intron | 30.0% |
| !! | TACATTGTTTTACAGCACTA+TGG | + | chr2.4:66573183-66573202 | MS.gene004470:intron | 30.0% |
| !! | TGTTGGTGCTTAAATTTTCA+TGG | + | chr2.4:66574510-66574529 | MS.gene004470:CDS | 30.0% |
| !!! | ACTTTTGTTGTTTATCAGTG+TGG | + | chr2.4:66573619-66573638 | MS.gene004470:intron | 30.0% |
| !!! | ATTATGTTTTGGTTGAGTAC+GGG | + | chr2.4:66572725-66572744 | MS.gene004470:intron | 30.0% |
| AATGCTTTATAAAGCGCAAC+CGG | + | chr2.4:66573272-66573291 | MS.gene004470:intron | 35.0% | |
| AATTAAATGTGCTAGGCTCT+AGG | + | chr2.4:66573833-66573852 | MS.gene004470:CDS | 35.0% | |
| ACAACTATGTTGGGAAATTG+AGG | + | chr2.4:66573553-66573572 | MS.gene004470:CDS | 35.0% | |
| ACACTGACACTTCATATTGA+AGG | + | chr2.4:66572754-66572773 | MS.gene004470:intron | 35.0% | |
| AGAGAAAACTCAGTTTGTGT+AGG | - | chr2.4:66574336-66574355 | None:intergenic | 35.0% | |
| AGATAGTGAACTTTGTTCCA+AGG | - | chr2.4:66573687-66573706 | None:intergenic | 35.0% | |
| ATCTATATATTGCAAGCAGG+GGG | + | chr2.4:66574244-66574263 | MS.gene004470:intron | 35.0% | |
| CACAAACAAGGGAATCTTAA+GGG | - | chr2.4:66573066-66573085 | None:intergenic | 35.0% | |
| CATAACTTTCGCAACTACAA+TGG | - | chr2.4:66572112-66572131 | None:intergenic | 35.0% | |
| CGATCGTTGTGATAAAAGTA+AGG | - | chr2.4:66573979-66573998 | None:intergenic | 35.0% | |
| CGGTAAGCTAAATAGTTTAC+GGG | - | chr2.4:66574189-66574208 | None:intergenic | 35.0% | |
| GAATATGACTATGTTGTGGA+AGG | + | chr2.4:66573102-66573121 | MS.gene004470:intron | 35.0% | |
| GATCGGAAAAAAGGAAACAA+GGG | - | chr2.4:66574378-66574397 | None:intergenic | 35.0% | |
| GCGGTAAGCTAAATAGTTTA+CGG | - | chr2.4:66574190-66574209 | None:intergenic | 35.0% | |
| GGAAGGTTTAGATCTCAAAA+AGG | - | chr2.4:66573399-66573418 | None:intergenic | 35.0% | |
| GTGATCATAGCTGAAATTTC+AGG | - | chr2.4:66571563-66571582 | None:intergenic | 35.0% | |
| TAAAAGTCGTTCTACTAGGT+TGG | + | chr2.4:66573744-66573763 | MS.gene004470:CDS | 35.0% | |
| TATACTATTCGACACCAAAG+AGG | - | chr2.4:66573033-66573052 | None:intergenic | 35.0% | |
| TCAAATACTCCTCTTACTAC+AGG | + | chr2.4:66572610-66572629 | MS.gene004470:intron | 35.0% | |
| TCATGTCTTCGATTATGTTG+CGG | - | chr2.4:66571313-66571332 | None:intergenic | 35.0% | |
| TGATCGGAAAAAAGGAAACA+AGG | - | chr2.4:66574379-66574398 | None:intergenic | 35.0% | |
| TGTAAAGGACCAAAATGTGT+TGG | + | chr2.4:66571809-66571828 | MS.gene004470:intron | 35.0% | |
| TTCGCCAATAGAAACATGTT+AGG | - | chr2.4:66573215-66573234 | None:intergenic | 35.0% | |
| TTCTATCGCTTTCCTCATAT+GGG | + | chr2.4:66571629-66571648 | MS.gene004470:intron | 35.0% | |
| TTTCCCCATTTCTGTTAAAC+AGG | + | chr2.4:66571583-66571602 | MS.gene004470:intron | 35.0% | |
| TTTCTATCGCTTTCCTCATA+TGG | + | chr2.4:66571628-66571647 | MS.gene004470:intron | 35.0% | |
| ! | CAACCAAATCCAACACATTT+TGG | - | chr2.4:66571821-66571840 | None:intergenic | 35.0% |
| ! | GGTGCTTAAATTTTCATGGA+CGG | + | chr2.4:66574514-66574533 | MS.gene004470:CDS | 35.0% |
| ! | GTGCTTAAATTTTCATGGAC+GGG | + | chr2.4:66574515-66574534 | MS.gene004470:CDS | 35.0% |
| ! | TGAGATATCATCTACTGGTT+TGG | + | chr2.4:66572692-66572711 | MS.gene004470:intron | 35.0% |
| ! | TGAGATCTAAACCTTCCTTT+TGG | + | chr2.4:66573402-66573421 | MS.gene004470:intron | 35.0% |
| ! | TGGGAAGGATTTGTTTACAA+TGG | + | chr2.4:66574638-66574657 | MS.gene004470:CDS | 35.0% |
| !! | CCACACGATTTGATTTTGAT+CGG | - | chr2.4:66574395-66574414 | None:intergenic | 35.0% |
| !! | TGCGCTTTATAAAGCATTGA+AGG | - | chr2.4:66573270-66573289 | None:intergenic | 35.0% |
| !! | TTGGTGTCGAATAGTATACA+TGG | + | chr2.4:66573035-66573054 | MS.gene004470:intron | 35.0% |
| !! | TTTTGACTACAACCCATATG+AGG | - | chr2.4:66571644-66571663 | None:intergenic | 35.0% |
| !!! | AAATGACCAGGTTTTGTTTC+TGG | + | chr2.4:66572545-66572564 | MS.gene004470:intron | 35.0% |
| AGAAGCAATGACCAAAAGGA+AGG | - | chr2.4:66573416-66573435 | None:intergenic | 40.0% | |
| ATAGTTTACGGGTAACGCTT+TGG | - | chr2.4:66574178-66574197 | None:intergenic | 40.0% | |
| ATCAAGATCGCAAAGAGTAG+TGG | + | chr2.4:66571334-66571353 | MS.gene004470:CDS | 40.0% | |
| CCACAAACAAGGGAATCTTA+AGG | - | chr2.4:66573067-66573086 | None:intergenic | 40.0% | |
| CCGATCAAAATCAAATCGTG+TGG | + | chr2.4:66574392-66574411 | MS.gene004470:CDS | 40.0% | |
| CTCGGTTAAAAACTTTCAGC+TGG | + | chr2.4:66574548-66574567 | MS.gene004470:CDS | 40.0% | |
| CTTGTTGGCGATAAAAGAGA+TGG | + | chr2.4:66574438-66574457 | MS.gene004470:CDS | 40.0% | |
| GCAATTTGGAAAAGTTGGGA+AGG | + | chr2.4:66574623-66574642 | MS.gene004470:CDS | 40.0% | |
| GGACCAAAATGTGTTGGATT+TGG | + | chr2.4:66571815-66571834 | MS.gene004470:intron | 40.0% | |
| GGATTTCCGATACCCTATTT+CGG | + | chr2.4:66574659-66574678 | MS.gene004470:CDS | 40.0% | |
| GGTAAAGTCACACAGATGAT+GGG | + | chr2.4:66573998-66574017 | MS.gene004470:intron | 40.0% | |
| GGTTAAAAACTTTCAGCTGG+TGG | + | chr2.4:66574551-66574570 | MS.gene004470:CDS | 40.0% | |
| GTAAACATACACAGAGGAAC+AGG | - | chr2.4:66572231-66572250 | None:intergenic | 40.0% | |
| GTGTGATTCTCTATTAGGCT+TGG | + | chr2.4:66572668-66572687 | MS.gene004470:intron | 40.0% | |
| TCCTAACCAAAAAGTAGGAG+AGG | + | chr2.4:66572969-66572988 | MS.gene004470:intron | 40.0% | |
| TCTGCGTGTGATTCTCTATT+AGG | + | chr2.4:66572663-66572682 | MS.gene004470:intron | 40.0% | |
| TGAAGTTCTTCTCCGAATTG+AGG | + | chr2.4:66571442-66571461 | MS.gene004470:CDS | 40.0% | |
| TGCTTCTTTAATTCAGCGCT+AGG | + | chr2.4:66573429-66573448 | MS.gene004470:intron | 40.0% | |
| TTCGATTGAAGAGGATGGAA+TGG | - | chr2.4:66574298-66574317 | None:intergenic | 40.0% | |
| TTGGCTGAGATATCATCTAC+TGG | + | chr2.4:66572687-66572706 | MS.gene004470:intron | 40.0% | |
| ! | AAGATTCCCTTGTTTGTGGA+AGG | + | chr2.4:66573068-66573087 | MS.gene004470:intron | 40.0% |
| ! | AGATTCCCTTGTTTGTGGAA+GGG | + | chr2.4:66573069-66573088 | MS.gene004470:intron | 40.0% |
| ! | CAGCTGAAAGTTTTTAACCG+AGG | - | chr2.4:66574550-66574569 | None:intergenic | 40.0% |
| ! | CCTTAAGATTCCCTTGTTTG+TGG | + | chr2.4:66573064-66573083 | MS.gene004470:intron | 40.0% |
| ! | GTAAATTTTGCTCCTGCATG+AGG | - | chr2.4:66573724-66573743 | None:intergenic | 40.0% |
| ! | GTCAATATATGAAGAGTGCG+CGG | - | chr2.4:66574209-66574228 | None:intergenic | 40.0% |
| ! | TCTCTTTTATCGCCAACAAG+AGG | - | chr2.4:66574438-66574457 | None:intergenic | 40.0% |
| !! | ACTGTTTTGGGCTAATTGAG+TGG | + | chr2.4:66572994-66573013 | MS.gene004470:intron | 40.0% |
| !! | ATATCATCTACTGGTTTGGC+TGG | + | chr2.4:66572696-66572715 | MS.gene004470:intron | 40.0% |
| !! | CAACTACAATGGCATCGATA+AGG | - | chr2.4:66572101-66572120 | None:intergenic | 40.0% |
| !! | CTGTTTTGGGCTAATTGAGT+GGG | + | chr2.4:66572995-66573014 | MS.gene004470:intron | 40.0% |
| !! | TAGGTTGGTGAATCTAAAGC+AGG | + | chr2.4:66573759-66573778 | MS.gene004470:CDS | 40.0% |
| !! | TATCATCTACTGGTTTGGCT+GGG | + | chr2.4:66572697-66572716 | MS.gene004470:intron | 40.0% |
| !!! | ACCTCTCCTACTTTTTGGTT+AGG | - | chr2.4:66572973-66572992 | None:intergenic | 40.0% |
| AAGATCGCAAAGAGTAGTGG+TGG | + | chr2.4:66571337-66571356 | MS.gene004470:CDS | 45.0% | |
| AAGGAGAATGCACTGTGTCA+TGG | + | chr2.4:66574269-66574288 | MS.gene004470:CDS | 45.0% | |
| AATGCCTGAAACGCCGAAAT+AGG | - | chr2.4:66574675-66574694 | None:intergenic | 45.0% | |
| AATTCAGCGCTAGGTGATGA+CGG | + | chr2.4:66573438-66573457 | MS.gene004470:intron | 45.0% | |
| ACAGTTTACGGCAGAGTTGT+TGG | + | chr2.4:66571393-66571412 | MS.gene004470:CDS | 45.0% | |
| AGAAAATGGAACAGCTGGAC+CGG | + | chr2.4:66574581-66574600 | MS.gene004470:CDS | 45.0% | |
| AGACGCAGATGATATGTCCA+GGG | + | chr2.4:66573524-66573543 | MS.gene004470:CDS | 45.0% | |
| AGGGGAAGCAACAACTATGT+TGG | + | chr2.4:66573543-66573562 | MS.gene004470:CDS | 45.0% | |
| ATACCCTATTTCGGCGTTTC+AGG | + | chr2.4:66574668-66574687 | MS.gene004470:CDS | 45.0% | |
| ATCATGCCCTTCCACAAACA+AGG | - | chr2.4:66573078-66573097 | None:intergenic | 45.0% | |
| ATGACACAGTGCATTCTCCT+TGG | - | chr2.4:66574270-66574289 | None:intergenic | 45.0% | |
| ATGCCTGAAACGCCGAAATA+GGG | - | chr2.4:66574674-66574693 | None:intergenic | 45.0% | |
| CAGTTTACGGCAGAGTTGTT+GGG | + | chr2.4:66571394-66571413 | MS.gene004470:CDS | 45.0% | |
| CATTGAAGGAGATTCTCCCT+TGG | - | chr2.4:66573256-66573275 | None:intergenic | 45.0% | |
| CGGTAAAGTCACACAGATGA+TGG | + | chr2.4:66573997-66574016 | MS.gene004470:intron | 45.0% | |
| GAAACGCCGAAATAGGGTAT+CGG | - | chr2.4:66574668-66574687 | None:intergenic | 45.0% | |
| GGGGAAGCAACAACTATGTT+GGG | + | chr2.4:66573544-66573563 | MS.gene004470:CDS | 45.0% | |
| GTGGTAGAGAACTCTCTATC+CGG | + | chr2.4:66574411-66574430 | MS.gene004470:CDS | 45.0% | |
| TAGACGCAGATGATATGTCC+AGG | + | chr2.4:66573523-66573542 | MS.gene004470:CDS | 45.0% | |
| TCATATGAGATGTGAGCCAC+TGG | - | chr2.4:66573814-66573833 | None:intergenic | 45.0% | |
| TCATGCCCTTCCACAAACAA+GGG | - | chr2.4:66573077-66573096 | None:intergenic | 45.0% | |
| TCTTGGTATCAAAGCTGCTG+AGG | - | chr2.4:66574707-66574726 | None:intergenic | 45.0% | |
| TGTTGAAAAACAAGGCTCCG+AGG | + | chr2.4:66574469-66574488 | MS.gene004470:CDS | 45.0% | |
| TTTATCGCCAACAAGAGGTC+CGG | - | chr2.4:66574433-66574452 | None:intergenic | 45.0% | |
| ! | AACATAGTTGTTGCTTCCCC+TGG | - | chr2.4:66573544-66573563 | None:intergenic | 45.0% |
| ! | AATTTTGCTCCTGCATGAGG+TGG | - | chr2.4:66573721-66573740 | None:intergenic | 45.0% |
| ! | ACCTAACCAACGTTTAGCTC+CGG | + | chr2.4:66572639-66572658 | MS.gene004470:intron | 45.0% |
| ! | AGTAGGAGAGGTCACTGTTT+TGG | + | chr2.4:66572981-66573000 | MS.gene004470:intron | 45.0% |
| ! | CTTCATATTGAAGGTGTGCC+CGG | + | chr2.4:66572763-66572782 | MS.gene004470:intron | 45.0% |
| ! | GTAGGAGAGGTCACTGTTTT+GGG | + | chr2.4:66572982-66573001 | MS.gene004470:intron | 45.0% |
| ! | TCCAGCTGTTCCATTTTCTG+CGG | - | chr2.4:66574580-66574599 | None:intergenic | 45.0% |
| ! | TCTAAAGCAGGTTTCACCCA+AGG | + | chr2.4:66573771-66573790 | MS.gene004470:CDS | 45.0% |
| !! | CAGTGACCTCTCCTACTTTT+TGG | - | chr2.4:66572978-66572997 | None:intergenic | 45.0% |
| !! | GACACCAAAGAGGCATCTTA+TGG | - | chr2.4:66573023-66573042 | None:intergenic | 45.0% |
| !! | TGTCGGTGTCATGTTGTTGT+CGG | - | chr2.4:66572792-66572811 | None:intergenic | 45.0% |
| AAGAACGTTGTTGCGTGTGC+TGG | + | chr2.4:66571491-66571510 | MS.gene004470:CDS | 50.0% | |
| AAGGAAGAGAAAGTGGCGGT+TGG | + | chr2.4:66571368-66571387 | MS.gene004470:CDS | 50.0% | |
| ACTTCACGCAGAAGCTCTTG+TGG | - | chr2.4:66571428-66571447 | None:intergenic | 50.0% | |
| AGACACTAACACGTCGACAC+CGG | - | chr2.4:66572853-66572872 | None:intergenic | 50.0% | |
| ATAGTTGCCTGTTGGGACCT+TGG | - | chr2.4:66573791-66573810 | None:intergenic | 50.0% | |
| ATCGCAAAGAGTAGTGGTGG+TGG | + | chr2.4:66571340-66571359 | MS.gene004470:CDS | 50.0% | |
| ATTCAGCGCTAGGTGATGAC+GGG | + | chr2.4:66573439-66573458 | MS.gene004470:intron | 50.0% | |
| CACGCAACAACGTTCTTCCT+CGG | - | chr2.4:66571488-66571507 | None:intergenic | 50.0% | |
| CCACTGGATAGTTGCCTGTT+GGG | - | chr2.4:66573798-66573817 | None:intergenic | 50.0% | |
| CCATCCTCTTCAATCGAACC+AGG | + | chr2.4:66574300-66574319 | MS.gene004470:CDS | 50.0% | |
| GACGCAGATGATATGTCCAG+GGG | + | chr2.4:66573525-66573544 | MS.gene004470:CDS | 50.0% | |
| GGAGAAGGAAGAGAAAGTGG+CGG | + | chr2.4:66571364-66571383 | MS.gene004470:CDS | 50.0% | |
| GGCTCCATAAGATGCCTCTT+TGG | + | chr2.4:66573016-66573035 | MS.gene004470:intron | 50.0% | |
| GGTAAGCGTCCTGTAGTAAG+AGG | - | chr2.4:66572622-66572641 | None:intergenic | 50.0% | |
| GTCATGTTGTTGTCGGACAC+CGG | - | chr2.4:66572785-66572804 | None:intergenic | 50.0% | |
| TACATTTGCGTGCAGCCAGA+AGG | - | chr2.4:66573470-66573489 | None:intergenic | 50.0% | |
| TAGAGAATCACACGCAGAGC+CGG | - | chr2.4:66572661-66572680 | None:intergenic | 50.0% | |
| TAGTTGCCTGTTGGGACCTT+GGG | - | chr2.4:66573790-66573809 | None:intergenic | 50.0% | |
| TCATGTTGTTGTCGGACACC+GGG | - | chr2.4:66572784-66572803 | None:intergenic | 50.0% | |
| TCCGCAGAAAATGGAACAGC+TGG | + | chr2.4:66574576-66574595 | MS.gene004470:CDS | 50.0% | |
| TCCTCTTCAATCGAACCAGG+TGG | + | chr2.4:66574303-66574322 | MS.gene004470:CDS | 50.0% | |
| TCTCTATCCGGACCTCTTGT+TGG | + | chr2.4:66574423-66574442 | MS.gene004470:CDS | 50.0% | |
| TCTTCTCCGAATTGAGGCCT+CGG | + | chr2.4:66571448-66571467 | MS.gene004470:CDS | 50.0% | |
| TGAAAAACAAGGCTCCGAGG+TGG | + | chr2.4:66574472-66574491 | MS.gene004470:CDS | 50.0% | |
| ! | CCTGGTTCGATTGAAGAGGA+TGG | - | chr2.4:66574303-66574322 | None:intergenic | 50.0% |
| !! | AATTTTGGCAGCCTGGTCCA+AGG | + | chr2.4:66573236-66573255 | MS.gene004470:intron | 50.0% |
| !! | ATTTTGGCAGCCTGGTCCAA+GGG | + | chr2.4:66573237-66573256 | MS.gene004470:intron | 50.0% |
| !! | GGCGAATAATTTTGGCAGCC+TGG | + | chr2.4:66573229-66573248 | MS.gene004470:intron | 50.0% |
| !! | TGATGACGGGAAGTTCCTTC+TGG | + | chr2.4:66573452-66573471 | MS.gene004470:CDS | 50.0% |
| AGGAGATTCTCCCTTGGACC+AGG | - | chr2.4:66573250-66573269 | None:intergenic | 55.0% | |
| ATATTGCAAGCAGGGGGCCA+AGG | + | chr2.4:66574250-66574269 | MS.gene004470:intron | 55.0% | |
| CCCAACAGGCAACTATCCAG+TGG | + | chr2.4:66573795-66573814 | MS.gene004470:CDS | 55.0% | |
| CTGGTGGCTTCCGCAGAAAA+TGG | + | chr2.4:66574567-66574586 | MS.gene004470:CDS | 55.0% | |
| GCAACAACGTTCTTCCTCGG+CGG | - | chr2.4:66571485-66571504 | None:intergenic | 55.0% | |
| GCCACTGGATAGTTGCCTGT+TGG | - | chr2.4:66573799-66573818 | None:intergenic | 55.0% | |
| GGCGGAGAAGGAAGAGAAAG+TGG | + | chr2.4:66571361-66571380 | MS.gene004470:CDS | 55.0% | |
| GTGCTGGAGTGTGTAGGAGT+TGG | + | chr2.4:66571507-66571526 | MS.gene004470:intron | 55.0% | |
| GTTTCACCCAAGGTCCCAAC+AGG | + | chr2.4:66573781-66573800 | MS.gene004470:CDS | 55.0% | |
| TGGACGGGTGACAATTGCCT+CGG | + | chr2.4:66574530-66574549 | MS.gene004470:CDS | 55.0% | |
| TGGCGGTTGGCGACAGTTTA+CGG | + | chr2.4:66571381-66571400 | MS.gene004470:CDS | 55.0% | |
| TGTCCTCCGAGGCCTCAATT+CGG | - | chr2.4:66571457-66571476 | None:intergenic | 55.0% | |
| TTGCGTGTGCTGGAGTGTGT+AGG | + | chr2.4:66571501-66571520 | MS.gene004470:intron | 55.0% | |
| ! | GCCACCTGGTTCGATTGAAG+AGG | - | chr2.4:66574307-66574326 | None:intergenic | 55.0% |
| ! | GCCGGAGCTAAACGTTGGTT+AGG | - | chr2.4:66572643-66572662 | None:intergenic | 55.0% |
| !! | GCAAAGAGTAGTGGTGGTGG+CGG | + | chr2.4:66571343-66571362 | MS.gene004470:CDS | 55.0% |
| GCAGAGCCGGAGCTAAACGT+TGG | - | chr2.4:66572648-66572667 | None:intergenic | 60.0% | |
| GGCATGAGCAGCTGCAGTGT+TGG | + | chr2.4:66574493-66574512 | MS.gene004470:CDS | 60.0% | |
| TCTCCGAATTGAGGCCTCGG+AGG | + | chr2.4:66571451-66571470 | MS.gene004470:CDS | 60.0% | |
| TGCAGCTGCTCATGCCACCT+CGG | - | chr2.4:66574489-66574508 | None:intergenic | 60.0% | |
| TGTGTAGGAGCTACGCCACC+TGG | - | chr2.4:66574321-66574340 | None:intergenic | 60.0% | |
| TTGCTCCTGCATGAGGTGGC+TGG | - | chr2.4:66573717-66573736 | None:intergenic | 60.0% | |
| !! | AGTAGTGGTGGTGGCGGAGA+AGG | + | chr2.4:66571349-66571368 | MS.gene004470:CDS | 60.0% |
| TTGAGGCCTCGGAGGACACG+TGG | + | chr2.4:66571459-66571478 | MS.gene004470:CDS | 65.0% | |
| GACGGCCAGCCACCTCATGC+AGG | + | chr2.4:66573709-66573728 | MS.gene004470:CDS | 70.0% | |
| ! | CGGAGGACACGTGGCCGCCG+AGG | + | chr2.4:66571468-66571487 | MS.gene004470:CDS | 80.0% |
| ! | CGGCGGCCACGTGTCCTCCG+AGG | - | chr2.4:66571468-66571487 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 66571299 | 66574740 | 66571299 | ID=MS.gene004470 |
| chr2.4 | mRNA | 66571299 | 66574740 | 66571299 | ID=MS.gene004470.t1;Parent=MS.gene004470 |
| chr2.4 | exon | 66571299 | 66571518 | 66571299 | ID=MS.gene004470.t1.exon1;Parent=MS.gene004470.t1 |
| chr2.4 | CDS | 66571299 | 66571518 | 66571299 | ID=cds.MS.gene004470.t1;Parent=MS.gene004470.t1 |
| chr2.4 | exon | 66573445 | 66573574 | 66573445 | ID=MS.gene004470.t1.exon2;Parent=MS.gene004470.t1 |
| chr2.4 | CDS | 66573445 | 66573574 | 66573445 | ID=cds.MS.gene004470.t1;Parent=MS.gene004470.t1 |
| chr2.4 | exon | 66573675 | 66573854 | 66573675 | ID=MS.gene004470.t1.exon3;Parent=MS.gene004470.t1 |
| chr2.4 | CDS | 66573675 | 66573854 | 66573675 | ID=cds.MS.gene004470.t1;Parent=MS.gene004470.t1 |
| chr2.4 | exon | 66574263 | 66574740 | 66574263 | ID=MS.gene004470.t1.exon4;Parent=MS.gene004470.t1 |
| chr2.4 | CDS | 66574263 | 66574740 | 66574263 | ID=cds.MS.gene004470.t1;Parent=MS.gene004470.t1 |
| Gene Sequence |
| Protein sequence |
