AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004573

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004573.t1 MTR_8g040560 55.556 207 90 1 216 420 735 941 4.73e-63 226
MS.gene004573.t1 MTR_8g040560 52.041 196 89 2 415 606 744 938 1.00e-47 181
MS.gene004573.t1 MTR_8g040560 44.712 208 85 7 27 213 448 646 6.82e-40 157
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004573.t1 AT3G12280 47.143 210 92 4 216 420 726 921 1.36e-48 183
MS.gene004573.t1 AT3G12280 44.749 219 87 7 11 207 426 632 5.31e-43 167
MS.gene004573.t1 AT3G12280 46.939 196 88 7 415 606 735 918 1.83e-36 147
MS.gene004573.t1 AT3G12280 47.143 210 92 4 216 420 726 921 1.36e-48 183
MS.gene004573.t1 AT3G12280 44.749 219 87 7 11 207 426 632 5.31e-43 167
MS.gene004573.t1 AT3G12280 46.939 196 88 7 415 606 735 918 1.83e-36 147

Find 154 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAACTGAACCTGAGTTTC+TGG 0.137982 2.2:+52324315 MS.gene004573:CDS
CTTGGGAAAGTTAATATTTC+AGG 0.148410 2.2:-52325691 None:intergenic
GGAGAGCATGGCATGGAAAA+AGG 0.224771 2.2:+52323477 MS.gene004573:CDS
TTCATTCAAAGAACAACTTT+TGG 0.245558 2.2:+52323456 MS.gene004573:CDS
AGTATTTCATGTAGTGTTTC+GGG 0.247285 2.2:-52323217 None:intergenic
AGACTATATTTCCTGATAAT+TGG 0.251144 2.2:+52323110 MS.gene004573:CDS
AATCAACAACTTCAGCTAAT+TGG 0.265538 2.2:-52324550 None:intergenic
TTCGGTTAATGAATCAGATT+TGG 0.268352 2.2:-52326795 None:intergenic
TGTTTCGGGCTCCTTCTTCT+TGG 0.285142 2.2:-52323203 None:intergenic
TTTCTATTCGGCCAATTATC+AGG 0.291015 2.2:-52323121 None:intergenic
TATGAAAATCGGAGAAGATA+TGG 0.312395 2.2:-52325134 None:intergenic
AGAGGTGTGTCCGCTGGTTT+AGG 0.315056 2.2:-52324151 None:intergenic
TTGGGAGCAGTCAGAATAAA+TGG 0.315321 2.2:+52325030 MS.gene004573:CDS
ATACGTCCTCCCTTGTCCTT+TGG 0.323788 2.2:-52324109 None:intergenic
TAGTATTTCATGTAGTGTTT+CGG 0.335939 2.2:-52323218 None:intergenic
TGCTGCTGGTGCGAGTTATT+TGG 0.349200 2.2:-52323297 None:intergenic
CACATGCAAGCAAACATCTA+TGG 0.358139 2.2:-52323255 None:intergenic
TACGTCCTCCCTTGTCCTTT+GGG 0.358218 2.2:-52324108 None:intergenic
AATCTTCGGATCTTTCTATT+CGG 0.373694 2.2:-52323133 None:intergenic
AGATATGGGGTCGTAGAGTT+AGG 0.375966 2.2:-52325119 None:intergenic
AGTACCTCAGATGATGAAAA+TGG 0.376291 2.2:-52324795 None:intergenic
GATTTGGGCTCGAAGAGTTC+AGG 0.378460 2.2:-52326779 None:intergenic
GAATGTATACCATCTCTTCC+AGG 0.390572 2.2:+52325092 MS.gene004573:CDS
AGAAGCAACACAACATGATT+TGG 0.399003 2.2:-52324193 None:intergenic
TTCATAGTGAATTTGCTGAT+TGG 0.403484 2.2:+52325360 MS.gene004573:CDS
AAGATTTCCTGTTATGCATT+GGG 0.406154 2.2:+52324737 MS.gene004573:CDS
CTACATTTCGTTGTGAAGTT+GGG 0.407614 2.2:-52323009 None:intergenic
CTATAATCCCTGGAAAAGTT+AGG 0.408836 2.2:-52325298 None:intergenic
GCATGCCTAGACCCGTCATA+TGG 0.410401 2.2:+52325389 MS.gene004573:CDS
GGAAGCAACACAAAATGATT+TGG 0.411763 2.2:-52325161 None:intergenic
AAAACTGAACCTGAGTTTCT+GGG 0.413033 2.2:+52324316 MS.gene004573:CDS
CATCTTTGTCACAGTGCTGC+TGG 0.413867 2.2:-52323311 None:intergenic
CAATGCATAACAGGAAATCT+TGG 0.415525 2.2:-52324735 None:intergenic
TCTGTGGCTTATCATCATTA+TGG 0.417278 2.2:-52324427 None:intergenic
TACTTTATACTATACAGTAT+TGG 0.418535 2.2:+52323165 MS.gene004573:CDS
TGTTTCTCAGATCAGTATGT+TGG 0.421499 2.2:+52324043 MS.gene004573:intron
TCTACATTTCGTTGTGAAGT+TGG 0.424113 2.2:-52323010 None:intergenic
TCGGTTAATGAATCAGATTT+GGG 0.425567 2.2:-52326794 None:intergenic
GATTTGGTCAATATGAAAAT+CGG 0.430588 2.2:-52325145 None:intergenic
TATGGCCCGCGCCCGCCAAT+GGG 0.433969 2.2:-52324409 None:intergenic
CTGCACTATATTATGTGCTC+TGG 0.435506 2.2:-52323089 None:intergenic
AATTGTAGCGGTTTGACTAC+AGG 0.438497 2.2:-52326834 None:intergenic
TATGCATGTGTCTCTCCAAT+AGG 0.440195 2.2:+52325754 MS.gene004573:CDS
CAAGATTTCCTGTTATGCAT+TGG 0.442326 2.2:+52324736 MS.gene004573:CDS
AGAAGTCGACTGAAGTATCC+TGG 0.442610 2.2:-52323430 None:intergenic
GCTCAGGACATTGAGCTAGA+TGG 0.442938 2.2:-52325666 None:intergenic
CTTTACACTGTTGTGACACC+TGG 0.443475 2.2:+52325500 MS.gene004573:CDS
GTTAATATTTCAGGAGGCTC+AGG 0.444282 2.2:-52325682 None:intergenic
TCTTGAAATCATACGCATCA+TGG 0.444821 2.2:+52323038 MS.gene004573:CDS
GATTGCCCATTGGCGGGCGC+GGG 0.447736 2.2:+52324404 MS.gene004573:CDS
GTTTCTCAGATCAGTATGTT+GGG 0.449448 2.2:+52324044 MS.gene004573:intron
ATGAAAATCGGAGAAGATAT+GGG 0.451100 2.2:-52325133 None:intergenic
CGGGCTCCTTCTTCTTGGCT+CGG 0.455002 2.2:-52323198 None:intergenic
TGATTGCCCATTGGCGGGCG+CGG 0.456069 2.2:+52324403 MS.gene004573:CDS
CGACAGCAGCGGCTTTACAT+AGG 0.459406 2.2:-52325474 None:intergenic
ATCTGTATGGCCACTGGTGA+TGG 0.459470 2.2:+52324493 MS.gene004573:CDS
AGCTGAAGTTGTTGATTCAA+AGG 0.461689 2.2:+52324556 MS.gene004573:CDS
CTCTCCAATACATCATCAGC+AGG 0.462992 2.2:-52323337 None:intergenic
ACACAAGACATTGAGCTAGA+TGG 0.464043 2.2:-52324692 None:intergenic
CTGTGGTTGCAGTTTATAGC+TGG 0.464811 2.2:-52325321 None:intergenic
AAGTAAGTGTATCAAATCTT+CGG 0.469338 2.2:-52323147 None:intergenic
AGTACCTCAGATGATCCTAT+TGG 0.469550 2.2:-52325769 None:intergenic
TGTTTCCTAGATCATTATGT+TGG 0.470021 2.2:+52325011 MS.gene004573:intron
GACGGTTGATTTCCTCTGAA+AGG 0.471928 2.2:-52323540 None:intergenic
GTTTCCTAGATCATTATGTT+GGG 0.473365 2.2:+52325012 MS.gene004573:intron
TTATGGCCCGCGCCCGCCAA+TGG 0.482127 2.2:-52324410 None:intergenic
CGCTCCATCTGTATGGCCAC+TGG 0.485239 2.2:+52324487 MS.gene004573:CDS
ACGGTTGATTTCCTCTGAAA+GGG 0.485458 2.2:-52323539 None:intergenic
ACACATGAAGACTCTTTCCC+AGG 0.486510 2.2:+52323412 MS.gene004573:CDS
TTTGTTGATTGCCCATTGGC+GGG 0.491247 2.2:+52324398 MS.gene004573:CDS
TCATAGTTTCTGCTGCCTCC+AGG 0.491389 2.2:-52323612 None:intergenic
AGAATAGTTTCATTGAATGA+TGG 0.491623 2.2:-52323586 None:intergenic
TTATAGCTGGCTATAATCCC+TGG 0.492789 2.2:-52325308 None:intergenic
ACATATTCGCTCCATCTGTA+TGG 0.497154 2.2:+52324480 MS.gene004573:CDS
GTCGTAGAGTTAGGATTCCC+TGG 0.506048 2.2:-52325110 None:intergenic
GACAGCAGCGGCTTTACATA+GGG 0.508885 2.2:-52325473 None:intergenic
GTTCCCTGCTGATGATGTAT+TGG 0.508997 2.2:+52323333 MS.gene004573:CDS
TCAGAGGAAATCAACCGTCT+TGG 0.513122 2.2:+52323544 MS.gene004573:CDS
AATGCATAACAGGAAATCTT+GGG 0.514779 2.2:-52324734 None:intergenic
GATGATGTATTGGAGAGCTC+TGG 0.517279 2.2:+52323343 MS.gene004573:CDS
GAAGTTGTTGATTCAAAGGA+TGG 0.517332 2.2:+52324560 MS.gene004573:CDS
TGAAGAAGAGGTGTGTCCGC+TGG 0.517765 2.2:-52324157 None:intergenic
ATTTGTTGATTGCCCATTGG+CGG 0.524796 2.2:+52324397 MS.gene004573:CDS
GACTACAGGGAGGGAAATAG+AGG 0.529169 2.2:-52326820 None:intergenic
CTTGAAATCATACGCATCAT+GGG 0.533418 2.2:+52323039 MS.gene004573:CDS
CATGCCTAGACCCGTCATAT+GGG 0.538915 2.2:+52325390 MS.gene004573:CDS
ATTGTAGCGGTTTGACTACA+GGG 0.539516 2.2:-52326833 None:intergenic
TACAATTATCCCAAAGGACA+AGG 0.539877 2.2:+52324099 MS.gene004573:CDS
TTGCTTCTATGTAGTCGCAC+AGG 0.540096 2.2:+52324208 MS.gene004573:CDS
CAGACATAACAGGAAGGCTT+GGG 0.541418 2.2:-52325708 None:intergenic
ATCACCAGTGGCCATACAGA+TGG 0.542017 2.2:-52324491 None:intergenic
GGGAGGGAAATAGAGGCATT+CGG 0.543422 2.2:-52326813 None:intergenic
CAATATGACGATTGAAGAAG+AGG 0.545947 2.2:-52324169 None:intergenic
CCGTCATATGGGAAAACAAA+GGG 0.546044 2.2:+52325401 MS.gene004573:CDS
ACAGACATAACAGGAAGGCT+TGG 0.546125 2.2:-52325709 None:intergenic
TGAATTTGCTGATTGGCCAT+TGG 0.549842 2.2:+52325367 MS.gene004573:CDS
AAGCCTTCCTGTTATGTCTG+TGG 0.553212 2.2:+52325711 MS.gene004573:CDS
TCCCACATCAATGTCTTACC+AGG 0.554424 2.2:-52322983 None:intergenic
TTAGGATTCCCTGGAAGAGA+TGG 0.561052 2.2:-52325101 None:intergenic
ATCATACGCATCATGGGGCG+AGG 0.568090 2.2:+52323045 MS.gene004573:CDS
AAAACGGGTGACCTGCACTC+TGG 0.568545 2.2:-52324365 None:intergenic
AATGTATACCATCTCTTCCA+GGG 0.569069 2.2:+52325093 MS.gene004573:CDS
TGTATTTGTTGATTGCCCAT+TGG 0.569139 2.2:+52324394 MS.gene004573:CDS
CTATGTAAAGCCGCTGCTGT+CGG 0.569655 2.2:+52325475 MS.gene004573:CDS
TGCTAGACCGTCCCTTTCAG+AGG 0.571805 2.2:+52323528 MS.gene004573:CDS
ACAAACAGCAACCAGAGTGC+AGG 0.572144 2.2:+52324354 MS.gene004573:CDS
GTTTCATTGAATGATGGCAT+TGG 0.572221 2.2:-52323580 None:intergenic
CAATGAAACTATTCTCGACC+TGG 0.573458 2.2:+52323594 MS.gene004573:CDS
AGTTATTTGGAGTACTTGAT+CGG 0.575426 2.2:-52323284 None:intergenic
TCAGATCAGTATGTTGGGAG+CGG 0.579103 2.2:+52324049 MS.gene004573:intron
TTGCTTCCGTGCAGTTGCAA+AGG 0.581575 2.2:+52325176 MS.gene004573:CDS
ATAATTCCAACACGCTTCTG+TGG 0.584901 2.2:-52324443 None:intergenic
GATAAGCCACAGAAGCGTGT+TGG 0.585393 2.2:+52324437 MS.gene004573:CDS
GGGAAAGTTAATATTTCAGG+AGG 0.586410 2.2:-52325688 None:intergenic
GAATACGCGGCATGGCTGAA+AGG 0.587007 2.2:+52324075 MS.gene004573:CDS
GTACAATCTCCCAGAAACTC+AGG 0.592499 2.2:-52324325 None:intergenic
TGTAATGAAACTTGTGGTGA+TGG 0.594107 2.2:-52323392 None:intergenic
CAAGAACCTTTGCAACTGCA+CGG 0.594438 2.2:-52325182 None:intergenic
TGTGTGCCGAGCCAAGAAGA+AGG 0.595093 2.2:+52323192 MS.gene004573:CDS
CTACAACTATCTCAGCAGAC+AGG 0.595751 2.2:+52325066 MS.gene004573:CDS
AGCGGTCAGAATACGCGGCA+TGG 0.598188 2.2:+52324067 MS.gene004573:CDS
TTTACACTGTTGTGACACCT+GGG 0.605280 2.2:+52325501 MS.gene004573:CDS
TTGATTTCCTCTGAAAGGGA+CGG 0.607373 2.2:-52323535 None:intergenic
GAAGTCGACTGAAGTATCCT+GGG 0.612687 2.2:-52323429 None:intergenic
GACGGGTCTAGGCATGCCAA+TGG 0.617781 2.2:-52325383 None:intergenic
ATAACAGGAAATCTTGGGAA+AGG 0.622579 2.2:-52324729 None:intergenic
CTTCCACAGACATAACAGGA+AGG 0.636074 2.2:-52325714 None:intergenic
TAGCGGTTTGACTACAGGGA+GGG 0.640113 2.2:-52326829 None:intergenic
AGCAGTCAGAATAAATGGCA+TGG 0.640293 2.2:+52325035 MS.gene004573:CDS
ACTGTTATAGGTCTGCTAGT+AGG 0.644936 2.2:-52326858 None:intergenic
AAAGGCTACAATTATCCCAA+AGG 0.645341 2.2:+52324093 MS.gene004573:CDS
TGAAAATCGGAGAAGATATG+GGG 0.645893 2.2:-52325132 None:intergenic
GTTGAGCAAACAGTCCAAGA+CGG 0.655365 2.2:-52323558 None:intergenic
GAATTCATTAACAAAGCCGA+TGG 0.655551 2.2:+52325542 MS.gene004573:CDS
TGACAAAGAGTTATACAATG+AGG 0.657399 2.2:-52323503 None:intergenic
CTCTCCAATAGGATCATCTG+AGG 0.660685 2.2:+52325765 MS.gene004573:CDS
ACAATTATCCCAAAGGACAA+GGG 0.662029 2.2:+52324100 MS.gene004573:CDS
TTGGGAGCGGTCAGAATACG+CGG 0.673382 2.2:+52324062 MS.gene004573:CDS
ACCTGGTAAGACATTGATGT+GGG 0.674272 2.2:+52322982 MS.gene004573:CDS
GTGTAAAGTTCCGACAGCAG+CGG 0.675258 2.2:-52325485 None:intergenic
TTCAGCGAATCCTAAACCAG+CGG 0.676523 2.2:+52324141 MS.gene004573:CDS
TTGAAATCATACGCATCATG+GGG 0.681522 2.2:+52323040 MS.gene004573:CDS
CCCGTCATATGGGAAAACAA+AGG 0.682970 2.2:+52325400 MS.gene004573:CDS
GTGATAAGTTCCATCACCAG+TGG 0.684233 2.2:-52324503 None:intergenic
TGAAACTATTCTCGACCTGG+AGG 0.688326 2.2:+52323597 MS.gene004573:CDS
CACCTGGTAAGACATTGATG+TGG 0.697380 2.2:+52322981 MS.gene004573:CDS
AGAGACACATGCATAGTGTG+CGG 0.699537 2.2:-52325746 None:intergenic
ACACTGTTGTGACACCTGGG+AGG 0.709129 2.2:+52325504 MS.gene004573:CDS
CTGCTAGTAGGAAATTGTAG+CGG 0.709881 2.2:-52326846 None:intergenic
ATTATCCCAAAGGACAAGGG+AGG 0.714855 2.2:+52324103 MS.gene004573:CDS
TCTCCAATACATCATCAGCA+GGG 0.719122 2.2:-52323336 None:intergenic
AAAACTGGTGGTGTGTACTG+TGG 0.738141 2.2:-52325338 None:intergenic
GTAGCGGTTTGACTACAGGG+AGG 0.751594 2.2:-52326830 None:intergenic
TTCATGTGTAATGAAACTTG+TGG 0.753409 2.2:-52323398 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTAAATTTAAAAATA+TGG - chr2.2:52324933-52324952 None:intergenic 0.0%
!! AAAAAATTGTTTAAAAATGA+AGG - chr2.2:52326234-52326253 None:intergenic 10.0%
!! AAAGTAAAAAAAAATGCTTT+GGG + chr2.2:52326125-52326144 MS.gene004573:intron 15.0%
!! AATAAAAAAAAGGATGTAAA+TGG - chr2.2:52323774-52323793 None:intergenic 15.0%
!! TAAAGTAAAAAAAAATGCTT+TGG + chr2.2:52326124-52326143 MS.gene004573:intron 15.0%
!! AAAAAAAGTTAACATTGCAT+TGG + chr2.2:52326195-52326214 MS.gene004573:intron 20.0%
!! AAAAGAATAGAATGAGAAAA+TGG - chr2.2:52324281-52324300 None:intergenic 20.0%
!! AAACAAACCAATAGTTAAAA+AGG - chr2.2:52326099-52326118 None:intergenic 20.0%
!! ATATAAGAATCCAATTTGAA+AGG - chr2.2:52323892-52323911 None:intergenic 20.0%
!! TACTTTATACTATACAGTAT+TGG + chr2.2:52323165-52323184 MS.gene004573:CDS 20.0%
!!! AACTAATCCTTTTTAACTAT+TGG + chr2.2:52326089-52326108 MS.gene004573:intron 20.0%
!!! AATAGTTAAAAAGGATTAGT+TGG - chr2.2:52326090-52326109 None:intergenic 20.0%
!!! CTCTTTTTTTTTTTTTTTGC+AGG + chr2.2:52325274-52325293 MS.gene004573:intron 20.0%
!!! TTACATCCTTTTTTTTATTG+TGG + chr2.2:52323775-52323794 MS.gene004573:intron 20.0%
!!! TTTTTTTTTGTTACCATGTT+TGG + chr2.2:52324879-52324898 MS.gene004573:intron 20.0%
! AAAAAAAGAGAAAACAGCAA+TGG - chr2.2:52325264-52325283 None:intergenic 25.0%
! AAAAGGATGTAAATGGAATT+TGG - chr2.2:52323767-52323786 None:intergenic 25.0%
! AAGTAAGTGTATCAAATCTT+CGG - chr2.2:52323150-52323169 None:intergenic 25.0%
! ACCAACAAGAAATAGAATAT+GGG - chr2.2:52325835-52325854 None:intergenic 25.0%
! AGAATAGTTTCATTGAATGA+TGG - chr2.2:52323589-52323608 None:intergenic 25.0%
! AGACTATATTTCCTGATAAT+TGG + chr2.2:52323110-52323129 MS.gene004573:CDS 25.0%
! AGATTCTCAATCAAGAAAAA+TGG - chr2.2:52326431-52326450 None:intergenic 25.0%
! GGAAAAAATATAAAAGTCCA+TGG - chr2.2:52325814-52325833 None:intergenic 25.0%
! TAATCATGTTCAACAACTAT+TGG + chr2.2:52323832-52323851 MS.gene004573:intron 25.0%
! TAGTATTTCATGTAGTGTTT+CGG - chr2.2:52323221-52323240 None:intergenic 25.0%
! TTCAAAATGAATGTTGTTGA+AGG + chr2.2:52326004-52326023 MS.gene004573:intron 25.0%
!! ATTCAAGTTTCCTTTCAAAT+TGG + chr2.2:52323879-52323898 MS.gene004573:intron 25.0%
!! GATTTGGTCAATATGAAAAT+CGG - chr2.2:52325148-52325167 None:intergenic 25.0%
!! TTCATTCAAAGAACAACTTT+TGG + chr2.2:52323456-52323475 MS.gene004573:CDS 25.0%
!!! AAATGACACTCATTTTGAAA+TGG + chr2.2:52326269-52326288 MS.gene004573:intron 25.0%
!!! AACCGAAATTGATTTTTCTT+GGG + chr2.2:52326582-52326601 MS.gene004573:intron 25.0%
!!! AACTTATGGGACATTTTTTT+TGG + chr2.2:52323940-52323959 MS.gene004573:intron 25.0%
!!! ATGTACATAGGAGTATTAAT+TGG + chr2.2:52326152-52326171 MS.gene004573:intron 25.0%
!!! CAACAACATTCATTTTGAAA+CGG - chr2.2:52326003-52326022 None:intergenic 25.0%
!!! TTTTTTTTTTGTTGCACTTC+CGG + chr2.2:52324988-52325007 MS.gene004573:intron 25.0%
AACAAATACACTGCGAAAAA+CGG - chr2.2:52324384-52324403 None:intergenic 30.0%
AACGAAACAAATAGTTGGTT+TGG - chr2.2:52326370-52326389 None:intergenic 30.0%
AAGATTTCCTGTTATGCATT+GGG + chr2.2:52324737-52324756 MS.gene004573:CDS 30.0%
AAGCCTTCATTAATTTCTAC+AGG - chr2.2:52326626-52326645 None:intergenic 30.0%
AATCAACAACTTCAGCTAAT+TGG - chr2.2:52324553-52324572 None:intergenic 30.0%
AATCTTCGGATCTTTCTATT+CGG - chr2.2:52323136-52323155 None:intergenic 30.0%
AATGCATAACAGGAAATCTT+GGG - chr2.2:52324737-52324756 None:intergenic 30.0%
AATTCACTATGAAAAACTGG+TGG - chr2.2:52325353-52325372 None:intergenic 30.0%
AGAAAAATCAATTTCGGTTG+TGG - chr2.2:52326581-52326600 None:intergenic 30.0%
AGAAAATCACACAAGTCAAA+GGG - chr2.2:52324663-52324682 None:intergenic 30.0%
AGCCTTCATTAATTTCTACA+GGG - chr2.2:52326625-52326644 None:intergenic 30.0%
AGTATTTCATGTAGTGTTTC+GGG - chr2.2:52323220-52323239 None:intergenic 30.0%
ATGAAAATCGGAGAAGATAT+GGG - chr2.2:52325136-52325155 None:intergenic 30.0%
CAAACAGTATTATTACCTCA+CGG - chr2.2:52323651-52323670 None:intergenic 30.0%
CAATTGAAAGTAACTTAGCT+AGG - chr2.2:52325582-52325601 None:intergenic 30.0%
CTTGGGAAAGTTAATATTTC+AGG - chr2.2:52325694-52325713 None:intergenic 30.0%
GAAAAATCAATTTCGGTTGT+GGG - chr2.2:52326580-52326599 None:intergenic 30.0%
GAACGAAATCAAAAAGAAAC+AGG - chr2.2:52323970-52323989 None:intergenic 30.0%
GACCAACAAGAAATAGAATA+TGG - chr2.2:52325836-52325855 None:intergenic 30.0%
GCAAATTCACTATGAAAAAC+TGG - chr2.2:52325356-52325375 None:intergenic 30.0%
GTCAAATGTTGACATTTACA+AGG + chr2.2:52325931-52325950 MS.gene004573:intron 30.0%
GTCTTGCCACAATAAAAAAA+AGG - chr2.2:52323784-52323803 None:intergenic 30.0%
GTTGTTGAACATGATTAAGA+TGG - chr2.2:52323829-52323848 None:intergenic 30.0%
GTTTCCTAGATCATTATGTT+GGG + chr2.2:52325012-52325031 MS.gene004573:intron 30.0%
TACCCTGTAGAAATTAATGA+AGG + chr2.2:52326620-52326639 MS.gene004573:intron 30.0%
TAGAAAATCACACAAGTCAA+AGG - chr2.2:52324664-52324683 None:intergenic 30.0%
TATGAAAATCGGAGAAGATA+TGG - chr2.2:52325137-52325156 None:intergenic 30.0%
TCGGTTAATGAATCAGATTT+GGG - chr2.2:52326797-52326816 None:intergenic 30.0%
TGACAAAGAGTTATACAATG+AGG - chr2.2:52323506-52323525 None:intergenic 30.0%
TGTTTCCTAGATCATTATGT+TGG + chr2.2:52325011-52325030 MS.gene004573:intron 30.0%
TTATTACCTCACGGAAAAAT+AGG - chr2.2:52323642-52323661 None:intergenic 30.0%
TTCATGTGTAATGAAACTTG+TGG - chr2.2:52323401-52323420 None:intergenic 30.0%
TTCCTACTATGTTTCATGTT+TGG + chr2.2:52324855-52324874 MS.gene004573:intron 30.0%
TTCGGTTAATGAATCAGATT+TGG - chr2.2:52326798-52326817 None:intergenic 30.0%
TTCTCAATCAAGAAAAATGG+TGG - chr2.2:52326428-52326447 None:intergenic 30.0%
! AGTTATTTGGAGTACTTGAT+CGG - chr2.2:52323287-52323306 None:intergenic 30.0%
! CTTGTGCTGTAATATTTTCA+CGG + chr2.2:52324906-52324925 MS.gene004573:intron 30.0%
! TCCCATATTCTATTTCTTGT+TGG + chr2.2:52325831-52325850 MS.gene004573:intron 30.0%
! TTGTGTGATTTTCTATTCAC+AGG + chr2.2:52324669-52324688 MS.gene004573:intron 30.0%
!! ACATAGGAGTATTAATTGGA+GGG + chr2.2:52326156-52326175 MS.gene004573:intron 30.0%
!! CAACCGAAATTGATTTTTCT+TGG + chr2.2:52326581-52326600 MS.gene004573:intron 30.0%
!! TACATAGGAGTATTAATTGG+AGG + chr2.2:52326155-52326174 MS.gene004573:intron 30.0%
!! TGTTTCCTTCTGAAACTTAT+GGG + chr2.2:52323927-52323946 MS.gene004573:intron 30.0%
!! TTCATAGTGAATTTGCTGAT+TGG + chr2.2:52325360-52325379 MS.gene004573:CDS 30.0%
!! TTGTTTCCTTCTGAAACTTA+TGG + chr2.2:52323926-52323945 MS.gene004573:intron 30.0%
!!! AACATTCATTTTGAAACGGA+GGG - chr2.2:52325999-52326018 None:intergenic 30.0%
!!! AGTCTTATCCGTGTTTTAAT+CGG + chr2.2:52326650-52326669 MS.gene004573:intron 30.0%
AAAACTGAACCTGAGTTTCT+GGG + chr2.2:52324316-52324335 MS.gene004573:CDS 35.0%
AAAGGCTACAATTATCCCAA+AGG + chr2.2:52324093-52324112 MS.gene004573:CDS 35.0%
AAATGGAGCATACAAGTCAA+TGG - chr2.2:52325641-52325660 None:intergenic 35.0%
AATGTATACCATCTCTTCCA+GGG + chr2.2:52325093-52325112 MS.gene004573:CDS 35.0%
AATGTCCCATAAGTTTCAGA+AGG - chr2.2:52323935-52323954 None:intergenic 35.0%
AATTCAAATCAAGTTCCCAC+AGG - chr2.2:52326516-52326535 None:intergenic 35.0%
AATTGAAAGCAAACTTAGCC+AGG - chr2.2:52324604-52324623 None:intergenic 35.0%
ACAAATACACTGCGAAAAAC+GGG - chr2.2:52324383-52324402 None:intergenic 35.0%
ACAATTATCCCAAAGGACAA+GGG + chr2.2:52324100-52324119 MS.gene004573:CDS 35.0%
ACAGGGTAAAGAAAATGTAG+TGG - chr2.2:52326608-52326627 None:intergenic 35.0%
ACCAAGTAAATGATACACTC+AGG + chr2.2:52326748-52326767 MS.gene004573:intron 35.0%
ACCTGAGTGTATCATTTACT+TGG - chr2.2:52326752-52326771 None:intergenic 35.0%
AGAAGCAACACAACATGATT+TGG - chr2.2:52324196-52324215 None:intergenic 35.0%
AGCCAAACATGAAACATAGT+AGG - chr2.2:52324860-52324879 None:intergenic 35.0%
AGTACCTCAGATGATGAAAA+TGG - chr2.2:52324798-52324817 None:intergenic 35.0%
AGTTTCTATCCTATTCCCTT+TGG - chr2.2:52326689-52326708 None:intergenic 35.0%
ATAACAGGAAATCTTGGGAA+AGG - chr2.2:52324732-52324751 None:intergenic 35.0%
CAACAACTATTGGATGTGTT+TGG + chr2.2:52323842-52323861 MS.gene004573:intron 35.0%
CAAGATTTCCTGTTATGCAT+TGG + chr2.2:52324736-52324755 MS.gene004573:CDS 35.0%
CAATATGACGATTGAAGAAG+AGG - chr2.2:52324172-52324191 None:intergenic 35.0%
CAATGCATAACAGGAAATCT+TGG - chr2.2:52324738-52324757 None:intergenic 35.0%
CATAATGATCTAGGAAACAC+CGG - chr2.2:52325010-52325029 None:intergenic 35.0%
CGATCAACGAAACAAATAGT+TGG - chr2.2:52326375-52326394 None:intergenic 35.0%
CTACATTTCGTTGTGAAGTT+GGG - chr2.2:52323012-52323031 None:intergenic 35.0%
CTATAATCCCTGGAAAAGTT+AGG - chr2.2:52325301-52325320 None:intergenic 35.0%
CTTGAAATCATACGCATCAT+GGG + chr2.2:52323039-52323058 MS.gene004573:CDS 35.0%
GAATTCATTAACAAAGCCGA+TGG + chr2.2:52325542-52325561 MS.gene004573:CDS 35.0%
GGAACTGTAACATTTCTGTT+GGG + chr2.2:52326474-52326493 MS.gene004573:intron 35.0%
GGAAGCAACACAAAATGATT+TGG - chr2.2:52325164-52325183 None:intergenic 35.0%
GGAATGCTTAAAGTGACTTA+GGG - chr2.2:52324004-52324023 None:intergenic 35.0%
GGCCCAAGAAAAATCAATTT+CGG - chr2.2:52326587-52326606 None:intergenic 35.0%
GGGAAAGTTAATATTTCAGG+AGG - chr2.2:52325691-52325710 None:intergenic 35.0%
GTTTCATTGAATGATGGCAT+TGG - chr2.2:52323583-52323602 None:intergenic 35.0%
GTTTCTCAGATCAGTATGTT+GGG + chr2.2:52324044-52324063 MS.gene004573:intron 35.0%
TACAATTATCCCAAAGGACA+AGG + chr2.2:52324099-52324118 MS.gene004573:CDS 35.0%
TATTAATTGGAGGGTTCAGT+TGG + chr2.2:52326165-52326184 MS.gene004573:intron 35.0%
TCAGAAGGAAACAAGCAAAA+TGG - chr2.2:52323920-52323939 None:intergenic 35.0%
TCTACATTTCGTTGTGAAGT+TGG - chr2.2:52323013-52323032 None:intergenic 35.0%
TCTGTGGCTTATCATCATTA+TGG - chr2.2:52324430-52324449 None:intergenic 35.0%
TCTTGAAATCATACGCATCA+TGG + chr2.2:52323038-52323057 MS.gene004573:CDS 35.0%
TGAAAATCGGAGAAGATATG+GGG - chr2.2:52325135-52325154 None:intergenic 35.0%
TGGAACTGTAACATTTCTGT+TGG + chr2.2:52326473-52326492 MS.gene004573:intron 35.0%
TGGAATGCTTAAAGTGACTT+AGG - chr2.2:52324005-52324024 None:intergenic 35.0%
TGTAATGAAACTTGTGGTGA+TGG - chr2.2:52323395-52323414 None:intergenic 35.0%
TGTTGGTCAAAACATTCAAC+TGG + chr2.2:52325848-52325867 MS.gene004573:intron 35.0%
TGTTTCTCAGATCAGTATGT+TGG + chr2.2:52324043-52324062 MS.gene004573:intron 35.0%
TTGAAATCATACGCATCATG+GGG + chr2.2:52323040-52323059 MS.gene004573:CDS 35.0%
TTGCAATTCCTGTTCTACAA+GGG - chr2.2:52323685-52323704 None:intergenic 35.0%
TTTCTATTCGGCCAATTATC+AGG - chr2.2:52323124-52323143 None:intergenic 35.0%
! ACATTCAACTGGCATTTTCT+TGG + chr2.2:52325859-52325878 MS.gene004573:intron 35.0%
! CACAAGAAGTGCAAACAATA+TGG - chr2.2:52324025-52324044 None:intergenic 35.0%
! CATTCAACTGGCATTTTCTT+GGG + chr2.2:52325860-52325879 MS.gene004573:intron 35.0%
! TGTATTTGTTGATTGCCCAT+TGG + chr2.2:52324394-52324413 MS.gene004573:CDS 35.0%
! TTTTCTTCCACAGACATAAC+AGG - chr2.2:52325721-52325740 None:intergenic 35.0%
!! AGCTGAAGTTGTTGATTCAA+AGG + chr2.2:52324556-52324575 MS.gene004573:CDS 35.0%
!! GAAGTTGTTGATTCAAAGGA+TGG + chr2.2:52324560-52324579 MS.gene004573:CDS 35.0%
!! GAGGTACTAAGTTTCTAGTA+TGG + chr2.2:52325784-52325803 MS.gene004573:intron 35.0%
!!! CAACATTCATTTTGAAACGG+AGG - chr2.2:52326000-52326019 None:intergenic 35.0%
!!! CTTGGGAAAGGTACTATTTT+TGG - chr2.2:52324720-52324739 None:intergenic 35.0%
!!! TGACACTCATTTTGAAATGG+AGG + chr2.2:52326272-52326291 MS.gene004573:intron 35.0%
AATTGTAGCGGTTTGACTAC+AGG - chr2.2:52326837-52326856 None:intergenic 40.0%
ACACAAGACATTGAGCTAGA+TGG - chr2.2:52324695-52324714 None:intergenic 40.0%
ACATATTCGCTCCATCTGTA+TGG + chr2.2:52324480-52324499 MS.gene004573:CDS 40.0%
ACCTGGTAAGACATTGATGT+GGG + chr2.2:52322982-52323001 MS.gene004573:CDS 40.0%
AGCAGTCAGAATAAATGGCA+TGG + chr2.2:52325035-52325054 MS.gene004573:CDS 40.0%
AGGTTCATCAAGTGGGAATA+GGG - chr2.2:52326554-52326573 None:intergenic 40.0%
AGTACCTCAGATGATCCTAT+TGG - chr2.2:52325772-52325791 None:intergenic 40.0%
ATAATTCCAACACGCTTCTG+TGG - chr2.2:52324446-52324465 None:intergenic 40.0%
ATTGTAGCGGTTTGACTACA+GGG - chr2.2:52326836-52326855 None:intergenic 40.0%
CAAAACTGAACCTGAGTTTC+TGG + chr2.2:52324315-52324334 MS.gene004573:CDS 40.0%
CAATGAAACTATTCTCGACC+TGG + chr2.2:52323594-52323613 MS.gene004573:CDS 40.0%
CACATGCAAGCAAACATCTA+TGG - chr2.2:52323258-52323277 None:intergenic 40.0%
CACTGTTATATGATGCTAGC+TGG + chr2.2:52326453-52326472 MS.gene004573:intron 40.0%
CCGTCATATGGGAAAACAAA+GGG + chr2.2:52325401-52325420 MS.gene004573:CDS 40.0%
CTGCACTATATTATGTGCTC+TGG - chr2.2:52323092-52323111 None:intergenic 40.0%
CTTGCAATTCCTGTTCTACA+AGG - chr2.2:52323686-52323705 None:intergenic 40.0%
GAATGTATACCATCTCTTCC+AGG + chr2.2:52325092-52325111 MS.gene004573:CDS 40.0%
GACTTGTATGCTCCATTTAC+AGG + chr2.2:52325643-52325662 MS.gene004573:intron 40.0%
GCATTCGACCGATTAAAACA+CGG - chr2.2:52326661-52326680 None:intergenic 40.0%
GGAATAGGATAGAAACTAGC+TGG + chr2.2:52326692-52326711 MS.gene004573:intron 40.0%
GGCAGATAAACTAGTACCAT+CGG - chr2.2:52325561-52325580 None:intergenic 40.0%
GTTAATATTTCAGGAGGCTC+AGG - chr2.2:52325685-52325704 None:intergenic 40.0%
TATGCATGTGTCTCTCCAAT+AGG + chr2.2:52325754-52325773 MS.gene004573:CDS 40.0%
TCTCCAATACATCATCAGCA+GGG - chr2.2:52323339-52323358 None:intergenic 40.0%
TGCAATTCCTGTTCTACAAG+GGG - chr2.2:52323684-52323703 None:intergenic 40.0%
TGCTCCCAACATAATGATCT+AGG - chr2.2:52325019-52325038 None:intergenic 40.0%
TGGTACTAGAGAAGAAGTGA+AGG + chr2.2:52326712-52326731 MS.gene004573:intron 40.0%
TTATAGCTGGCTATAATCCC+TGG - chr2.2:52325311-52325330 None:intergenic 40.0%
TTGGGAGCAGTCAGAATAAA+TGG + chr2.2:52325030-52325049 MS.gene004573:CDS 40.0%
TTTACACTGTTGTGACACCT+GGG + chr2.2:52325501-52325520 MS.gene004573:CDS 40.0%
! ACGGTTGATTTCCTCTGAAA+GGG - chr2.2:52323542-52323561 None:intergenic 40.0%
! ATTTGTTGATTGCCCATTGG+CGG + chr2.2:52324397-52324416 MS.gene004573:CDS 40.0%
! CGTTTTTCCCAATGCATAAC+AGG - chr2.2:52324747-52324766 None:intergenic 40.0%
! CTCTCCATTTTCATCATCTG+AGG + chr2.2:52324791-52324810 MS.gene004573:CDS 40.0%
! GAGGTACTAAGTTTCATGTC+TGG + chr2.2:52324810-52324829 MS.gene004573:intron 40.0%
! TACTTACCTCTTTGTTTGCC+TGG + chr2.2:52324583-52324602 MS.gene004573:intron 40.0%
! TTGATTTCCTCTGAAAGGGA+CGG - chr2.2:52323538-52323557 None:intergenic 40.0%
!! AGAACAACTTTTGGAGAGCA+TGG + chr2.2:52323465-52323484 MS.gene004573:CDS 40.0%
!! CATACAAGTCAATGGATTGC+AGG - chr2.2:52325633-52325652 None:intergenic 40.0%
!! GATTGACCTATTTTTCCGTG+AGG + chr2.2:52323633-52323652 MS.gene004573:CDS 40.0%
!! GCTTTGGGAGTAATGTACAT+AGG + chr2.2:52326140-52326159 MS.gene004573:intron 40.0%
!! GTTTCTAGTATGGCTTTCCA+TGG + chr2.2:52325794-52325813 MS.gene004573:intron 40.0%
!! TGAATTTGCTGATTGGCCAT+TGG + chr2.2:52325367-52325386 MS.gene004573:CDS 40.0%
!!! AGACGCGTAAGTTTTTTGTG+GGG - chr2.2:52324773-52324792 None:intergenic 40.0%
!!! AGAGACGCGTAAGTTTTTTG+TGG - chr2.2:52324775-52324794 None:intergenic 40.0%
!!! CCCTTTGTTTTCCCATATGA+CGG - chr2.2:52325404-52325423 None:intergenic 40.0%
!!! CCTTTGTTTTCCCATATGAC+GGG - chr2.2:52325403-52325422 None:intergenic 40.0%
!!! GAGACGCGTAAGTTTTTTGT+GGG - chr2.2:52324774-52324793 None:intergenic 40.0%
AAGCCTTCCTGTTATGTCTG+TGG + chr2.2:52325711-52325730 MS.gene004573:CDS 45.0%
AAGTCAAAGGGTTGCAGAAC+TGG - chr2.2:52324651-52324670 None:intergenic 45.0%
ACACATGAAGACTCTTTCCC+AGG + chr2.2:52323412-52323431 MS.gene004573:CDS 45.0%
ACAGACATAACAGGAAGGCT+TGG - chr2.2:52325712-52325731 None:intergenic 45.0%
ACTGGCATAGCAATGGAAGT+CGG - chr2.2:52324633-52324652 None:intergenic 45.0%
ACTTAGCCAGGCAAACAAAG+AGG - chr2.2:52324592-52324611 None:intergenic 45.0%
AGAGACACATGCATAGTGTG+CGG - chr2.2:52325749-52325768 None:intergenic 45.0%
AGATATGGGGTCGTAGAGTT+AGG - chr2.2:52325122-52325141 None:intergenic 45.0%
ATGCAGAGTCCAAAGGGAAT+AGG + chr2.2:52326677-52326696 MS.gene004573:intron 45.0%
ATTATCCCAAAGGACAAGGG+AGG + chr2.2:52324103-52324122 MS.gene004573:CDS 45.0%
CAAGAACCTTTGCAACTGCA+CGG - chr2.2:52325185-52325204 None:intergenic 45.0%
CACCTGGTAAGACATTGATG+TGG + chr2.2:52322981-52323000 MS.gene004573:CDS 45.0%
CAGACATAACAGGAAGGCTT+GGG - chr2.2:52325711-52325730 None:intergenic 45.0%
CAGCACAAGAAAGCCAAACA+TGG - chr2.2:52324895-52324914 None:intergenic 45.0%
CCCGTCATATGGGAAAACAA+AGG + chr2.2:52325400-52325419 MS.gene004573:CDS 45.0%
CTACAACTATCTCAGCAGAC+AGG + chr2.2:52325066-52325085 MS.gene004573:CDS 45.0%
CTCTCCAATACATCATCAGC+AGG - chr2.2:52323340-52323359 None:intergenic 45.0%
CTCTCCAATAGGATCATCTG+AGG + chr2.2:52325765-52325784 MS.gene004573:CDS 45.0%
CTGTGGTTGCAGTTTATAGC+TGG - chr2.2:52325324-52325343 None:intergenic 45.0%
CTTCCACAGACATAACAGGA+AGG - chr2.2:52325717-52325736 None:intergenic 45.0%
CTTGCATAGCAATGGAAGTC+AGG - chr2.2:52325609-52325628 None:intergenic 45.0%
CTTTACACTGTTGTGACACC+TGG + chr2.2:52325500-52325519 MS.gene004573:CDS 45.0%
GAGGTTCATCAAGTGGGAAT+AGG - chr2.2:52326555-52326574 None:intergenic 45.0%
GATGATGTATTGGAGAGCTC+TGG + chr2.2:52323343-52323362 MS.gene004573:CDS 45.0%
GCAATTCCTGTTCTACAAGG+GGG - chr2.2:52323683-52323702 None:intergenic 45.0%
GTACAATCTCCCAGAAACTC+AGG - chr2.2:52324328-52324347 None:intergenic 45.0%
GTGATAAGTTCCATCACCAG+TGG - chr2.2:52324506-52324525 None:intergenic 45.0%
GTTGAGCAAACAGTCCAAGA+CGG - chr2.2:52323561-52323580 None:intergenic 45.0%
TAATTGGAGGGTTCAGTTGG+AGG + chr2.2:52326168-52326187 MS.gene004573:intron 45.0%
TCAGAGGAAATCAACCGTCT+TGG + chr2.2:52323544-52323563 MS.gene004573:CDS 45.0%
TCAGATCAGTATGTTGGGAG+CGG + chr2.2:52324049-52324068 MS.gene004573:intron 45.0%
TCCCACATCAATGTCTTACC+AGG - chr2.2:52322986-52323005 None:intergenic 45.0%
TGAAACTATTCTCGACCTGG+AGG + chr2.2:52323597-52323616 MS.gene004573:CDS 45.0%
TGAGCTAGATGGCCTGTAAA+TGG - chr2.2:52325658-52325677 None:intergenic 45.0%
TTAGGATTCCCTGGAAGAGA+TGG - chr2.2:52325104-52325123 None:intergenic 45.0%
TTCAGCGAATCCTAAACCAG+CGG + chr2.2:52324141-52324160 MS.gene004573:CDS 45.0%
TTGCAGAACTGGCATAGCAA+TGG - chr2.2:52324640-52324659 None:intergenic 45.0%
TTGCAGGACTTGCATAGCAA+TGG - chr2.2:52325617-52325636 None:intergenic 45.0%
TTGCTTCTATGTAGTCGCAC+AGG + chr2.2:52324208-52324227 MS.gene004573:CDS 45.0%
! AAAACTGGTGGTGTGTACTG+TGG - chr2.2:52325341-52325360 None:intergenic 45.0%
! ACTGATTCTGCAACTCCTGT+GGG + chr2.2:52326498-52326517 MS.gene004573:intron 45.0%
! AGAAGTCGACTGAAGTATCC+TGG - chr2.2:52323433-52323452 None:intergenic 45.0%
! GAAGTCGACTGAAGTATCCT+GGG - chr2.2:52323432-52323451 None:intergenic 45.0%
! GACGGTTGATTTCCTCTGAA+AGG - chr2.2:52323543-52323562 None:intergenic 45.0%
! GAGAGCATGGCATGGAAAAA+GGG + chr2.2:52323478-52323497 MS.gene004573:CDS 45.0%
! GTTCCCTGCTGATGATGTAT+TGG + chr2.2:52323333-52323352 MS.gene004573:CDS 45.0%
! TGCAGGACCTAACTTTTCCA+GGG + chr2.2:52325291-52325310 MS.gene004573:intron 45.0%
! TTGCAGGACCTAACTTTTCC+AGG + chr2.2:52325290-52325309 MS.gene004573:intron 45.0%
! TTTGTTGATTGCCCATTGGC+GGG + chr2.2:52324398-52324417 MS.gene004573:CDS 45.0%
!! AACTTTTGGAGAGCATGGCA+TGG + chr2.2:52323470-52323489 MS.gene004573:CDS 45.0%
!! GCTATTTTGTAACTCCTCCC+AGG - chr2.2:52325521-52325540 None:intergenic 45.0%
!!! TTTTCCCATATGACGGGTCT+AGG - chr2.2:52325397-52325416 None:intergenic 45.0%
ACAAACAGCAACCAGAGTGC+AGG + chr2.2:52324354-52324373 MS.gene004573:CDS 50.0%
ATACGTCCTCCCTTGTCCTT+TGG - chr2.2:52324112-52324131 None:intergenic 50.0%
ATCACCAGTGGCCATACAGA+TGG - chr2.2:52324494-52324513 None:intergenic 50.0%
ATCTGTATGGCCACTGGTGA+TGG + chr2.2:52324493-52324512 MS.gene004573:CDS 50.0%
CATCTTTGTCACAGTGCTGC+TGG - chr2.2:52323314-52323333 None:intergenic 50.0%
CATGCCTAGACCCGTCATAT+GGG + chr2.2:52325390-52325409 MS.gene004573:CDS 50.0%
CTATGTAAAGCCGCTGCTGT+CGG + chr2.2:52325475-52325494 MS.gene004573:CDS 50.0%
CTGGCATAGCAATGGAAGTC+GGG - chr2.2:52324632-52324651 None:intergenic 50.0%
GACAGCAGCGGCTTTACATA+GGG - chr2.2:52325476-52325495 None:intergenic 50.0%
GACTACAGGGAGGGAAATAG+AGG - chr2.2:52326823-52326842 None:intergenic 50.0%
GATTTGGGCTCGAAGAGTTC+AGG - chr2.2:52326782-52326801 None:intergenic 50.0%
GCTCAGGACATTGAGCTAGA+TGG - chr2.2:52325669-52325688 None:intergenic 50.0%
GGTCGAATGCAGAGTCCAAA+GGG + chr2.2:52326671-52326690 MS.gene004573:intron 50.0%
GTCGTAGAGTTAGGATTCCC+TGG - chr2.2:52325113-52325132 None:intergenic 50.0%
GTGTAAAGTTCCGACAGCAG+CGG - chr2.2:52325488-52325507 None:intergenic 50.0%
TACCAACCCCCTTGTAGAAC+AGG + chr2.2:52323674-52323693 MS.gene004573:intron 50.0%
TACGTCCTCCCTTGTCCTTT+GGG - chr2.2:52324111-52324130 None:intergenic 50.0%
TAGCGGTTTGACTACAGGGA+GGG - chr2.2:52326832-52326851 None:intergenic 50.0%
TCATAGTTTCTGCTGCCTCC+AGG - chr2.2:52323615-52323634 None:intergenic 50.0%
TGCTGCTGGTGCGAGTTATT+TGG - chr2.2:52323300-52323319 None:intergenic 50.0%
TGGGCTGAGGTTCATCAAGT+GGG - chr2.2:52326561-52326580 None:intergenic 50.0%
TGTTTCGGGCTCCTTCTTCT+TGG - chr2.2:52323206-52323225 None:intergenic 50.0%
TTCCTGTTCTACAAGGGGGT+TGG - chr2.2:52323679-52323698 None:intergenic 50.0%
TTGCTTCCGTGCAGTTGCAA+AGG + chr2.2:52325176-52325195 MS.gene004573:CDS 50.0%
! GATAAGCCACAGAAGCGTGT+TGG + chr2.2:52324437-52324456 MS.gene004573:CDS 50.0%
! GGAGAGCATGGCATGGAAAA+AGG + chr2.2:52323477-52323496 MS.gene004573:CDS 50.0%
! TCAATTTCGGTTGTGGGCTG+AGG - chr2.2:52326574-52326593 None:intergenic 50.0%
!! CACTGATTCTGCAACTCCTG+TGG + chr2.2:52326497-52326516 MS.gene004573:intron 50.0%
!! GGGAGGGAAATAGAGGCATT+CGG - chr2.2:52326816-52326835 None:intergenic 50.0%
AAAACGGGTGACCTGCACTC+TGG - chr2.2:52324368-52324387 None:intergenic 55.0%
ACACTGTTGTGACACCTGGG+AGG + chr2.2:52325504-52325523 MS.gene004573:CDS 55.0%
ATCATACGCATCATGGGGCG+AGG + chr2.2:52323045-52323064 MS.gene004573:CDS 55.0%
CGACAGCAGCGGCTTTACAT+AGG - chr2.2:52325477-52325496 None:intergenic 55.0%
CGGTCGAATGCAGAGTCCAA+AGG + chr2.2:52326670-52326689 MS.gene004573:intron 55.0%
GAATACGCGGCATGGCTGAA+AGG + chr2.2:52324075-52324094 MS.gene004573:CDS 55.0%
GCATGCCTAGACCCGTCATA+TGG + chr2.2:52325389-52325408 MS.gene004573:CDS 55.0%
GTAGCGGTTTGACTACAGGG+AGG - chr2.2:52326833-52326852 None:intergenic 55.0%
TGCTAGACCGTCCCTTTCAG+AGG + chr2.2:52323528-52323547 MS.gene004573:CDS 55.0%
TGTGTGCCGAGCCAAGAAGA+AGG + chr2.2:52323192-52323211 MS.gene004573:CDS 55.0%
TTGGGAGCGGTCAGAATACG+CGG + chr2.2:52324062-52324081 MS.gene004573:CDS 55.0%
! GTGGGCTGAGGTTCATCAAG+TGG - chr2.2:52326562-52326581 None:intergenic 55.0%
! TGAAGAAGAGGTGTGTCCGC+TGG - chr2.2:52324160-52324179 None:intergenic 55.0%
!! AGAGGTGTGTCCGCTGGTTT+AGG - chr2.2:52324154-52324173 None:intergenic 55.0%
AGCGGTCAGAATACGCGGCA+TGG + chr2.2:52324067-52324086 MS.gene004573:CDS 60.0%
CGCTCCATCTGTATGGCCAC+TGG + chr2.2:52324487-52324506 MS.gene004573:CDS 60.0%
CGGGCTCCTTCTTCTTGGCT+CGG - chr2.2:52323201-52323220 None:intergenic 60.0%
GACGGGTCTAGGCATGCCAA+TGG - chr2.2:52325386-52325405 None:intergenic 60.0%
! TGATTGCCCATTGGCGGGCG+CGG + chr2.2:52324403-52324422 MS.gene004573:CDS 65.0%
TATGGCCCGCGCCCGCCAAT+GGG - chr2.2:52324412-52324431 None:intergenic 70.0%
TTATGGCCCGCGCCCGCCAA+TGG - chr2.2:52324413-52324432 None:intergenic 70.0%
! GATTGCCCATTGGCGGGCGC+GGG + chr2.2:52324404-52324423 MS.gene004573:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 52322977 52326865 52322977 ID=MS.gene004573
chr2.2 mRNA 52322977 52326865 52322977 ID=MS.gene004573.t1;Parent=MS.gene004573
chr2.2 exon 52322977 52323654 52322977 ID=MS.gene004573.t1.exon1;Parent=MS.gene004573.t1
chr2.2 CDS 52322977 52323654 52322977 ID=cds.MS.gene004573.t1;Parent=MS.gene004573.t1
chr2.2 exon 52324053 52324229 52324053 ID=MS.gene004573.t1.exon2;Parent=MS.gene004573.t1
chr2.2 CDS 52324053 52324229 52324053 ID=cds.MS.gene004573.t1;Parent=MS.gene004573.t1
chr2.2 exon 52324311 52324581 52324311 ID=MS.gene004573.t1.exon3;Parent=MS.gene004573.t1
chr2.2 CDS 52324311 52324581 52324311 ID=cds.MS.gene004573.t1;Parent=MS.gene004573.t1
chr2.2 exon 52324691 52324812 52324691 ID=MS.gene004573.t1.exon4;Parent=MS.gene004573.t1
chr2.2 CDS 52324691 52324812 52324691 ID=cds.MS.gene004573.t1;Parent=MS.gene004573.t1
chr2.2 exon 52325021 52325197 52325021 ID=MS.gene004573.t1.exon5;Parent=MS.gene004573.t1
chr2.2 CDS 52325021 52325197 52325021 ID=cds.MS.gene004573.t1;Parent=MS.gene004573.t1
chr2.2 exon 52325296 52325563 52325296 ID=MS.gene004573.t1.exon6;Parent=MS.gene004573.t1
chr2.2 CDS 52325296 52325563 52325296 ID=cds.MS.gene004573.t1;Parent=MS.gene004573.t1
chr2.2 exon 52325665 52325786 52325665 ID=MS.gene004573.t1.exon7;Parent=MS.gene004573.t1
chr2.2 CDS 52325665 52325786 52325665 ID=cds.MS.gene004573.t1;Parent=MS.gene004573.t1
chr2.2 exon 52326770 52326865 52326770 ID=MS.gene004573.t1.exon8;Parent=MS.gene004573.t1
chr2.2 CDS 52326770 52326865 52326770 ID=cds.MS.gene004573.t1;Parent=MS.gene004573.t1
Gene Sequence

>MS.gene004573

ATGGCACCTGGTAAGACATTGATGTGGGAAATCCCAACTTCACAACGAAATGTAGATTACTTCTTGAAATCATACGCATCATGGGGCGAGGATGTTACAGATGTTTTGAGTTCCAGAGCACATAATATAGTGCAGACTATATTTCCTGATAATTGGCCGAATAGAAAGATCCGAAGATTTGATACACTTACTTTATACTATACAGTATTGGAACGTGTGTGCCGAGCCAAGAAGAAGGAGCCCGAAACACTACATGAAATACTAACTTCTGATATCTTCCATAGATGTTTGCTTGCATGTGCTGCTGCCGATCAAGTACTCCAAATAACTCGCACCAGCAGCACTGTGACAAAGATGTTCCCTGCTGATGATGTATTGGAGAGCTCTGGAATTACAGCTTTTGATCTTAGTCATACCATCACCACAAGTTTCATTACACATGAAGACTCTTTCCCAGGATACTTCAGTCGACTTCTCAATTCATTCAAAGAACAACTTTTGGAGAGCATGGCATGGAAAAAGGGTTCCTCATTGTATAACTCTTTGTCACTTGCTAGACCGTCCCTTTCAGAGGAAATCAACCGTCTTGGACTGTTTGCTCAACCAATGCCATCATTCAATGAAACTATTCTCGACCTGGAGGCAGCAGAAACTATGATTGACCTATTTTTCCGTGAGGTAATAATACTGTTTGTTATACCAACCCCCTTGTAGAACAGGAATTGCAAGCTGTATATGAATGAAATAGCTGTTGATAATACTTCTTTTCATAACTGATATTTACTCTCCAAATTCCATTTACATCCTTTTTTTTATTGTGGCAAGACATCAATCTGTTAGTCTGAAGCTCCATCTTAATCATGTTCAACAACTATTGGATGTGTTTGGATTTTATGTTAAGAATTCAAGTTTCCTTTCAAATTGGATTCTTATATCACTTCCATTTTGCTTGTTTCCTTCTGAAACTTATGGGACATTTTTTTTGGTTCGCCTGTTTCTTTTTGATTTCGTTCTTTTGCTGCTTCCCTAAGTCACTTTAAGCATTCCATATTGTTTGCACTTCTTGTGTTTCTCAGATCAGTATGTTGGGAGCGGTCAGAATACGCGGCATGGCTGAAAGGCTACAATTATCCCAAAGGACAAGGGAGGACGTATACAGTCTTTTTCAGCGAATCCTAAACCAGCGGACACACCTCTTCTTCAATCGTCATATTGACCAAATCATGTTGTGTTGCTTCTATGTAGTCGCACAGGTTTCTCTTTTAACTTTGAAAACATGAGAGTGCATTGTGCTTCATTTACCATTTTCTCATTCTATTCTTTTTTATTTGCAGTTTTCAAAACTGAACCTGAGTTTCTGGGAGATTGTACACAGCTACAAACAGCAACCAGAGTGCAGGTCACCCGTTTTTCGCAGTGTATTTGTTGATTGCCCATTGGCGGGCGCGGGCCATAATGATGATAAGCCACAGAAGCGTGTTGGAATTATTACATTTTACAATGACATATTCGCTCCATCTGTATGGCCACTGGTGATGGAACTTATCACTGATGAAGAAACTGTGAAAAGTGACCAATTAGCTGAAGTTGTTGATTCAAAGGATGGTACTTACCTCTTTGTTTGCCTGGCTAAGTTTGCTTTCAATTGTTTGCCCGACTTCCATTGCTATGCCAGTTCTGCAACCCTTTGACTTGTGTGATTTTCTATTCACAGGCCATCTAGCTCAATGTCTTGTGTCTCCAAAAATAGTACCTTTCCCAAGATTTCCTGTTATGCATTGGGAAAAACGATACCCCACAAAAAACTTACGCGTCTCTCCATTTTCATCATCTGAGGTACTAAGTTTCATGTCTGGCTTTCTTTTGACTATTTCTCTTTTCCTACTATGTTTCATGTTTGGCTTTTTTTTTGTTACCATGTTTGGCTTTCTTGTGCTGTAATATTTTCACGGTCCATATTTTTAAATTTAATTATTTTTTTGCTTCACTAAGTCATTTTGAGCATTACATTTTTTTTTTTTGTTGCACTTCCGGTGTTTCCTAGATCATTATGTTGGGAGCAGTCAGAATAAATGGCATGGTTGAAAAGCTACAACTATCTCAGCAGACAGGAGAGAATGTATACCATCTCTTCCAGGGAATCCTAACTCTACGACCCCATATCTTCTCCGATTTTCATATTGACCAAATCATTTTGTGTTGCTTCCGTGCAGTTGCAAAGGTTCTTGTAAATCTGAGAGTTGTTTCTCTTTAAGTTTTAGTAATCTGAGAGTGTAATGTGATTCCATTGCTGTTTTCTCTTTTTTTTTTTTTTTGCAGGACCTAACTTTTCCAGGGATTATAGCCAGCTATAAACTGCAACCACAGTACACACCACCAGTTTTTCATAGTGAATTTGCTGATTGGCCATTGGCATGCCTAGACCCGTCATATGGGAAAACAAAGGGACTGACACATATCACTAACATTGTAAAATATTACAATGATATATTCTTTCCCTATGTAAAGCCGCTGCTGTCGGAACTTTACACTGTTGTGACACCTGGGAGGAGTTACAAAATAGCTGAATTCATTAACAAAGCCGATGGTACTAGTTTATCTGCCTAGCTAAGTTACTTTCAATTGTTTTCCTGACTTCCATTGCTATGCAAGTCCTGCAATCCATTGACTTGTATGCTCCATTTACAGGCCATCTAGCTCAATGTCCTGAGCCTCCTGAAATATTAACTTTCCCAAGCCTTCCTGTTATGTCTGTGGAAGAAAAGTCTGCCGCACACTATGCATGTGTCTCTCCAATAGGATCATCTGAGGTACTAAGTTTCTAGTATGGCTTTCCATGGACTTTTATATTTTTTCCCATATTCTATTTCTTGTTGGTCAAAACATTCAACTGGCATTTTCTTGGGAAAAGAAGCACATGACGCTGTGACTCGTGCAGTTATAGATAAGTTTATGTCAAATGTTGACATTTACAAGGTCAATGTTTTCAATTTTGTACAAAGACTTTAAATTTTGTGCTCCCTCCGTTTCAAAATGAATGTTGTTGAAGGTTTTTACACATATATGAAGAAATGCAATGATTAGAAGAATGAGAATTGTTATTTTACTCACCAACTAATCCTTTTTAACTATTGGTTTGTTTTCTGCTAAAGTAAAAAAAAATGCTTTGGGAGTAATGTACATAGGAGTATTAATTGGAGGGTTCAGTTGGAGGAAAAAAAAAAAGTTAACATTGCATTGGAAGCTGAAAATGACCTTCATTTTTAAACAATTTTTTATTTATTTTTTGCTAAAATGACACTCATTTTGAAATGGAGGCAGCGATTTTTAAACTTTTGATTTCTAGTAGAGACAAATTTGTATCTGCAATAAAATTGTTGACTTAGAGAACCAAACCAACTATTTGTTTCGTTGATCGAGAAATTTCTGCAATGCGTCATTGATGTAACCACCATTTTTCTTGATTGAGAATCTCTCACTGTTATATGATGCTAGCTGGAACTGTAACATTTCTGTTGGGCACTGATTCTGCAACTCCTGTGGGAACTTGATTTGAATTGTGTGATAATTTAAGCCCTATTCCCACTTGATGAACCTCAGCCCACAACCGAAATTGATTTTTCTTGGGCCACTACATTTTCTTTACCCTGTAGAAATTAATGAAGGCTTTGCAAGTCTTATCCGTGTTTTAATCGGTCGAATGCAGAGTCCAAAGGGAATAGGATAGAAACTAGCTGGTACTAGAGAAGAAGTGAAGGAATTCACTATTGAACCAAGTAAATGATACACTCAGGTTGTTCGACCTGAACTCTTCGAGCCCAAATCTGATTCATTAACCGAATGCCTCTATTTCCCTCCCTGTAGTCAAACCGCTACAATTTCCTACTAG
Protein sequence

>MS.gene004573.t1

MAPGKTLMWEIPTSQRNVDYFLKSYASWGEDVTDVLSSRAHNIVQTIFPDNWPNRKIRRFDTLTLYYTVLERVCRAKKKEPETLHEILTSDIFHRCLLACAAADQVLQITRTSSTVTKMFPADDVLESSGITAFDLSHTITTSFITHEDSFPGYFSRLLNSFKEQLLESMAWKKGSSLYNSLSLARPSLSEEINRLGLFAQPMPSFNETILDLEAAETMIDLFFREISMLGAVRIRGMAERLQLSQRTREDVYSLFQRILNQRTHLFFNRHIDQIMLCCFYVVAQFSKLNLSFWEIVHSYKQQPECRSPVFRSVFVDCPLAGAGHNDDKPQKRVGIITFYNDIFAPSVWPLVMELITDEETVKSDQLAEVVDSKDGHLAQCLVSPKIVPFPRFPVMHWEKRYPTKNLRVSPFSSSEIIMLGAVRINGMVEKLQLSQQTGENVYHLFQGILTLRPHIFSDFHIDQIILCCFRAVAKDLTFPGIIASYKLQPQYTPPVFHSEFADWPLACLDPSYGKTKGLTHITNIVKYYNDIFFPYVKPLLSELYTVVTPGRSYKIAEFINKADGHLAQCPEPPEILTFPSLPVMSVEEKSAAHYACVSPIGSSEVVRPELFEPKSDSLTECLYFPPCSQTATISY