AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004711

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004711.t1 MTR_1g073170 98.947 95 1 0 1 95 1 95 9.70e-65 198
MS.gene004711.t1 MTR_1g073170 90.476 42 4 0 95 136 215 256 8.70e-18 77.4
MS.gene004711.t1 MTR_1g045610 80.435 92 18 0 4 95 5 96 4.69e-51 163
MS.gene004711.t1 MTR_1g110460 60.920 87 34 0 16 102 22 108 7.97e-35 123
MS.gene004711.t1 MTR_1g086510 63.415 82 30 0 21 102 22 103 2.58e-34 120
MS.gene004711.t1 MTR_1g086530 57.778 90 36 1 8 95 19 108 1.25e-33 119
MS.gene004711.t1 MTR_6g006030 65.333 75 26 0 21 95 15 89 7.21e-33 115
MS.gene004711.t1 MTR_7g035075 65.333 75 26 0 21 95 15 89 9.01e-33 115
MS.gene004711.t1 MTR_1g085040 52.381 105 49 1 13 116 5 109 5.66e-31 114
MS.gene004711.t1 MTR_4g478180 48.039 102 48 1 16 112 9 110 3.21e-30 112
MS.gene004711.t1 MTR_7g111290 51.429 105 50 1 13 116 5 109 1.32e-29 110
MS.gene004711.t1 MTR_3g097450 58.537 82 34 0 14 95 6 87 2.24e-29 108
MS.gene004711.t1 MTR_8g027345 62.162 74 28 0 22 95 14 87 4.37e-29 107
MS.gene004711.t1 MTR_4g063100 58.667 75 31 0 21 95 8 82 4.69e-29 106
MS.gene004711.t1 MTR_3g074520 56.250 80 35 0 16 95 8 87 5.46e-29 108
MS.gene004711.t1 MTR_4g102380 61.333 75 29 0 21 95 13 87 7.64e-29 106
MS.gene004711.t1 MTR_3g052430 61.333 75 29 0 21 95 42 116 8.44e-29 110
MS.gene004711.t1 MTR_3g052450 60.000 80 32 0 16 95 36 115 2.10e-28 108
MS.gene004711.t1 MTR_4g125520 59.459 74 30 0 22 95 14 87 2.27e-28 106
MS.gene004711.t1 MTR_8g042410 62.667 75 28 0 21 95 38 112 6.27e-28 107
MS.gene004711.t1 MTR_5g029840 58.667 75 31 0 21 95 13 87 7.43e-28 105
MS.gene004711.t1 MTR_3g011610 60.000 75 30 0 21 95 38 112 8.23e-28 107
MS.gene004711.t1 MTR_2g033170 52.941 102 45 1 4 102 5 106 8.75e-28 105
MS.gene004711.t1 MTR_8g031360 50.000 98 47 2 21 116 14 111 9.76e-28 104
MS.gene004711.t1 MTR_5g007300 56.000 75 33 0 21 95 65 139 1.05e-27 100
MS.gene004711.t1 MTR_4g121460 60.494 81 32 0 21 101 13 93 1.17e-27 104
MS.gene004711.t1 MTR_5g079670 44.231 104 53 1 14 112 5 108 1.22e-27 102
MS.gene004711.t1 MTR_8g017440 54.217 83 38 0 13 95 5 87 1.27e-27 104
MS.gene004711.t1 MTR_7g117730 45.045 111 54 2 22 127 14 122 1.35e-27 103
MS.gene004711.t1 MTR_1g085640 48.571 105 53 1 13 116 5 109 1.61e-27 105
MS.gene004711.t1 MTR_1g112760 47.525 101 52 1 17 116 10 110 1.74e-27 102
MS.gene004711.t1 MTR_5g007370 51.250 80 39 0 16 95 8 87 1.92e-27 103
MS.gene004711.t1 MTR_7g011170 60.000 75 30 0 21 95 13 87 2.05e-27 103
MS.gene004711.t1 MTR_3g077110 48.515 101 51 1 17 116 9 109 2.34e-27 104
MS.gene004711.t1 MTR_2g096380 53.086 81 38 0 15 95 1 81 2.86e-27 101
MS.gene004711.t1 MTR_4g082230 50.000 102 50 1 16 116 8 109 2.96e-27 104
MS.gene004711.t1 MTR_7g110830 47.619 105 54 1 13 116 5 109 3.30e-27 104
MS.gene004711.t1 MTR_8g017500 54.217 83 38 0 13 95 5 87 4.49e-27 103
MS.gene004711.t1 MTR_4g073420 54.878 82 37 0 14 95 6 87 4.50e-27 102
MS.gene004711.t1 MTR_1g021230 60.000 75 30 0 21 95 58 132 5.05e-27 104
MS.gene004711.t1 MTR_7g115650 54.667 75 34 0 21 95 13 87 8.83e-27 99.8
MS.gene004711.t1 MTR_2g011660 56.000 75 33 0 21 95 14 88 9.12e-27 102
MS.gene004711.t1 MTR_3g083540 49.485 97 44 1 21 112 42 138 1.08e-26 101
MS.gene004711.t1 MTR_8g095390 48.077 104 53 1 14 116 6 109 1.87e-26 101
MS.gene004711.t1 MTR_6g012690 49.485 97 44 2 21 112 13 109 1.93e-26 102
MS.gene004711.t1 MTR_8g017540 53.012 83 39 0 13 95 51 133 2.93e-26 102
MS.gene004711.t1 MTR_2g099740 53.012 83 39 0 13 95 5 87 2.99e-26 102
MS.gene004711.t1 MTR_3g065440 57.333 75 32 0 21 95 13 87 3.15e-26 100
MS.gene004711.t1 MTR_1g076150 54.667 75 34 0 21 95 13 87 3.63e-26 99.4
MS.gene004711.t1 MTR_2g089620 56.000 75 33 0 21 95 13 87 5.71e-26 100
MS.gene004711.t1 MTR_4g082290 49.485 97 48 1 21 116 13 109 6.47e-26 101
MS.gene004711.t1 MTR_7g076740 46.939 98 50 2 21 116 13 110 6.73e-26 99.8
MS.gene004711.t1 MTR_2g064160 50.588 85 42 0 11 95 2 86 7.29e-26 99.8
MS.gene004711.t1 MTR_1g100653 46.392 97 51 1 21 116 13 109 7.80e-26 99.4
MS.gene004711.t1 MTR_4g485530 46.875 96 46 1 22 112 14 109 8.74e-26 96.7
MS.gene004711.t1 MTR_5g078140 56.000 75 33 0 21 95 13 87 9.19e-26 99.8
MS.gene004711.t1 MTR_4g123040 58.537 82 34 0 21 102 25 106 1.11e-25 99.4
MS.gene004711.t1 MTR_4g105130 46.667 105 55 1 13 116 5 109 1.19e-25 99.8
MS.gene004711.t1 MTR_0008s0280 52.439 82 39 0 21 102 13 94 1.94e-25 97.1
MS.gene004711.t1 MTR_2g034790 56.790 81 35 0 21 101 13 93 2.29e-25 98.6
MS.gene004711.t1 MTR_4g091490 54.667 75 34 0 21 95 14 88 2.30e-25 99.0
MS.gene004711.t1 MTR_1g100667 51.579 95 44 1 11 103 2 96 3.49e-25 97.1
MS.gene004711.t1 MTR_1g043080 52.000 75 36 0 21 95 13 87 4.06e-25 96.7
MS.gene004711.t1 MTR_1g062940 57.333 75 32 0 21 95 7 81 5.83e-25 95.5
MS.gene004711.t1 MTR_7g096930 52.000 75 36 0 21 95 13 87 5.92e-25 96.7
MS.gene004711.t1 MTR_2g089420 58.025 81 34 0 21 101 12 92 6.18e-25 99.0
MS.gene004711.t1 MTR_0008s0390 51.807 83 40 0 21 103 14 96 1.13e-24 95.9
MS.gene004711.t1 MTR_3g028740 43.689 103 57 1 15 116 17 119 1.24e-24 97.1
MS.gene004711.t1 MTR_2g089450 47.917 96 45 1 21 111 13 108 1.59e-24 95.1
MS.gene004711.t1 MTR_6g055910 49.438 89 45 0 15 103 9 97 2.09e-24 95.5
MS.gene004711.t1 MTR_5g010020 49.398 83 42 0 13 95 5 87 2.48e-24 95.9
MS.gene004711.t1 MTR_2g097910 47.423 97 50 1 21 116 21 117 3.14e-24 95.5
MS.gene004711.t1 MTR_8g098860 49.398 83 42 0 13 95 5 87 3.72e-24 95.1
MS.gene004711.t1 MTR_0251s0050 51.807 83 40 0 21 103 14 96 3.99e-24 94.4
MS.gene004711.t1 MTR_7g010210 45.361 97 48 2 21 112 13 109 4.45e-24 94.4
MS.gene004711.t1 MTR_1g043050 52.000 75 36 0 21 95 13 87 5.17e-24 93.6
MS.gene004711.t1 MTR_4g065017 55.128 78 35 0 18 95 15 92 5.26e-24 95.1
MS.gene004711.t1 MTR_6g012180 54.667 75 34 0 21 95 13 87 6.08e-24 94.7
MS.gene004711.t1 MTR_7g010210 45.361 97 48 2 21 112 13 109 7.42e-24 94.7
MS.gene004711.t1 MTR_8g017390 44.340 106 53 3 13 112 5 110 9.81e-24 95.9
MS.gene004711.t1 MTR_0140s0030 46.392 97 47 2 21 112 14 110 1.01e-23 94.4
MS.gene004711.t1 MTR_0489s0020 46.392 97 47 2 21 112 14 110 1.01e-23 94.4
MS.gene004711.t1 MTR_8g017340 44.340 106 53 3 13 112 5 110 1.06e-23 95.9
MS.gene004711.t1 MTR_5g042030 54.667 75 34 0 21 95 8 82 1.13e-23 93.6
MS.gene004711.t1 MTR_0008s0470 49.398 83 42 0 21 103 14 96 1.45e-23 93.2
MS.gene004711.t1 MTR_8g020490 50.617 81 40 0 22 102 10 90 1.84e-23 92.4
MS.gene004711.t1 MTR_1g083630 47.000 100 52 1 19 117 11 110 2.39e-23 95.1
MS.gene004711.t1 MTR_3g039990 53.333 75 35 0 21 95 14 88 2.39e-23 93.2
MS.gene004711.t1 MTR_8g017350 44.340 106 53 3 13 112 5 110 3.33e-23 94.7
MS.gene004711.t1 MTR_0063s0090 48.193 83 43 0 21 103 13 95 3.49e-23 90.9
MS.gene004711.t1 MTR_2g088170 62.667 75 28 0 21 95 30 104 3.57e-23 94.0
MS.gene004711.t1 MTR_7g087130 53.333 75 35 0 21 95 13 87 4.52e-23 92.8
MS.gene004711.t1 MTR_3g461490 50.000 82 41 0 14 95 6 87 6.01e-23 92.0
MS.gene004711.t1 MTR_1g017000 45.679 81 43 1 16 95 8 88 1.24e-22 90.1
MS.gene004711.t1 MTR_4g100720 50.000 74 37 0 22 95 15 88 1.25e-22 88.2
MS.gene004711.t1 MTR_2g067420 52.000 75 36 0 21 95 15 89 2.82e-22 90.5
MS.gene004711.t1 MTR_2g095520 50.000 84 41 1 21 103 13 96 2.86e-22 90.1
MS.gene004711.t1 MTR_5g088640 51.351 74 36 0 21 94 13 86 3.57e-22 89.4
MS.gene004711.t1 MTR_5g088080 51.351 74 36 0 21 94 13 86 3.93e-22 89.0
MS.gene004711.t1 MTR_5g088150 51.351 74 36 0 21 94 13 86 3.93e-22 89.0
MS.gene004711.t1 MTR_5g488210 51.351 74 36 0 21 94 13 86 3.93e-22 89.0
MS.gene004711.t1 MTR_5g488170 51.351 74 36 0 21 94 13 86 5.62e-22 88.2
MS.gene004711.t1 MTR_6g009430 52.703 74 35 0 21 94 13 86 3.05e-21 87.8
MS.gene004711.t1 MTR_7g109320 61.333 75 29 0 21 95 13 87 3.25e-21 87.8
MS.gene004711.t1 MTR_5g062790 50.000 74 37 0 21 94 10 83 3.90e-21 87.0
MS.gene004711.t1 MTR_8g006470 49.383 81 40 1 16 95 6 86 5.44e-21 86.3
MS.gene004711.t1 MTR_5g078910 53.659 82 37 1 15 95 1 82 8.06e-21 86.3
MS.gene004711.t1 MTR_8g060940 42.708 96 50 1 21 111 8 103 8.63e-21 85.1
MS.gene004711.t1 MTR_0197s0010 43.011 93 48 1 25 112 6 98 1.98e-20 84.0
MS.gene004711.t1 MTR_7g102110 46.429 84 44 1 21 103 13 96 2.30e-20 84.3
MS.gene004711.t1 MTR_5g079120 38.235 136 76 4 15 142 55 190 3.84e-20 84.3
MS.gene004711.t1 MTR_4g057635 42.857 98 54 2 21 116 13 110 4.73e-20 84.3
MS.gene004711.t1 MTR_4g029540 48.684 76 38 1 21 95 11 86 9.35e-20 83.2
MS.gene004711.t1 MTR_4g097570 44.048 84 46 1 21 103 13 96 1.04e-19 83.2
MS.gene004711.t1 MTR_6g090405 45.122 82 44 1 14 94 6 87 1.48e-19 82.0
MS.gene004711.t1 MTR_3g103570 47.561 82 42 1 21 101 13 94 1.74e-19 83.2
MS.gene004711.t1 MTR_5g078930 40.952 105 56 2 14 112 2 106 2.46e-19 80.9
MS.gene004711.t1 MTR_1g017140 42.857 98 54 2 21 116 13 110 3.66e-19 82.0
MS.gene004711.t1 MTR_5g079290 47.826 92 47 1 5 95 1 92 4.16e-19 80.9
MS.gene004711.t1 MTR_4g128670 44.048 84 46 1 21 103 13 96 6.58e-19 81.6
MS.gene004711.t1 MTR_5g078800 50.000 82 40 1 15 95 1 82 7.79e-19 80.1
MS.gene004711.t1 MTR_4g097570 43.529 85 46 2 21 103 13 97 8.72e-19 80.5
MS.gene004711.t1 MTR_0001s0360 42.708 96 50 1 21 111 8 103 1.20e-18 79.7
MS.gene004711.t1 MTR_5g079220 50.667 75 37 0 21 95 22 96 2.11e-18 79.3
MS.gene004711.t1 MTR_5g014990 40.816 98 56 2 21 116 13 110 2.28e-18 79.7
MS.gene004711.t1 MTR_0247s0040 40.206 97 53 1 21 112 8 104 3.77e-18 76.6
MS.gene004711.t1 MTR_7g017260 39.394 99 53 2 21 112 26 124 5.40e-18 78.2
MS.gene004711.t1 MTR_5g078950 48.000 75 39 0 21 95 8 82 8.21e-18 77.4
MS.gene004711.t1 MTR_5g088610 44.595 74 41 0 21 94 10 83 8.61e-18 78.6
MS.gene004711.t1 MTR_0193s0090 48.000 75 39 0 21 95 8 82 1.61e-17 75.9
MS.gene004711.t1 MTR_0023s0210 48.571 70 36 0 21 90 8 77 2.37e-17 72.0
MS.gene004711.t1 MTR_4g063100 66.667 45 15 0 51 95 9 53 2.58e-17 75.5
MS.gene004711.t1 MTR_5g078860 45.455 88 47 1 15 101 1 88 5.73e-17 75.9
MS.gene004711.t1 MTR_7g111290 53.731 67 30 1 51 116 1 67 1.54e-16 74.7
MS.gene004711.t1 MTR_5g070020 49.333 75 35 2 22 95 122 194 5.82e-16 73.6
MS.gene004711.t1 MTR_3g101290 45.333 75 38 2 22 95 37 109 8.38e-16 71.6
MS.gene004711.t1 MTR_5g016510 45.333 75 38 2 22 95 5 77 1.55e-15 72.0
MS.gene004711.t1 MTR_5g049190 46.667 75 37 2 22 95 19 91 4.85e-15 69.7
MS.gene004711.t1 MTR_2g096380 62.222 45 17 0 51 95 18 62 1.13e-14 68.2
MS.gene004711.t1 MTR_4g094982 44.595 74 40 1 22 95 5 77 1.15e-14 68.9
MS.gene004711.t1 MTR_6g015455 45.333 75 38 2 22 95 5 77 1.45e-14 70.1
MS.gene004711.t1 MTR_4g019370 46.667 75 37 2 22 95 38 110 1.54e-14 69.3
MS.gene004711.t1 MTR_7g061550 45.679 81 39 2 17 95 5 82 1.76e-14 69.3
MS.gene004711.t1 MTR_1g085880 54.237 59 26 1 19 76 10 68 1.78e-14 67.4
MS.gene004711.t1 MTR_1g085770 54.237 59 26 1 19 76 10 68 4.07e-14 67.8
MS.gene004711.t1 MTR_3g463400 45.333 75 38 2 22 95 133 205 6.34e-14 67.8
MS.gene004711.t1 MTR_6g055910 54.717 53 24 0 51 103 16 68 1.08e-13 66.2
MS.gene004711.t1 MTR_4g105660 45.333 75 38 2 22 95 180 252 1.55e-13 66.6
MS.gene004711.t1 MTR_4g128190 43.243 74 29 1 21 94 12 72 1.84e-13 65.5
MS.gene004711.t1 MTR_3g077650 40.964 83 46 2 14 95 173 253 2.60e-13 66.2
MS.gene004711.t1 MTR_1g057980 40.000 80 47 1 16 95 74 152 2.77e-13 65.5
MS.gene004711.t1 MTR_3g045430 37.349 83 52 0 21 103 14 96 2.79e-13 65.5
MS.gene004711.t1 MTR_7g451170 45.333 75 38 2 22 95 191 263 5.57e-13 65.1
MS.gene004711.t1 MTR_4g088015 42.667 75 40 2 22 95 221 293 5.95e-13 65.1
MS.gene004711.t1 MTR_5g082910 45.333 75 38 2 22 95 19 91 7.40e-13 64.3
MS.gene004711.t1 MTR_1g026870 34.167 120 69 4 22 133 85 202 1.23e-12 64.3
MS.gene004711.t1 MTR_6g027340 40.541 74 41 2 22 94 16 87 2.06e-12 62.0
MS.gene004711.t1 MTR_7g037260 41.892 74 42 1 22 95 145 217 3.11e-12 62.8
MS.gene004711.t1 MTR_6g027360 38.961 77 44 2 19 94 75 149 4.36e-12 62.4
MS.gene004711.t1 MTR_3g110028 40.000 75 42 2 22 95 85 157 5.22e-12 62.4
MS.gene004711.t1 MTR_7g061330 44.000 75 39 2 22 95 113 185 6.37e-12 62.4
MS.gene004711.t1 MTR_7g461410 44.000 75 39 2 22 95 113 185 6.37e-12 62.4
MS.gene004711.t1 MTR_7g061330 44.000 75 39 2 22 95 77 149 6.80e-12 62.0
MS.gene004711.t1 MTR_7g450950 36.486 74 46 1 22 95 157 229 1.81e-11 60.8
MS.gene004711.t1 MTR_5g041570 41.333 75 41 2 22 95 134 206 4.00e-11 59.7
MS.gene004711.t1 MTR_5g010650 44.000 75 39 2 22 95 110 182 4.76e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004711.t1 AT4G13480 83.951 81 13 0 15 95 1 81 1.33e-45 149
MS.gene004711.t1 AT3G24310 83.544 79 13 0 17 95 15 93 7.61e-45 147
MS.gene004711.t1 AT3G30210 77.333 75 17 0 21 95 28 102 2.18e-36 126
MS.gene004711.t1 AT1G48000 66.265 83 28 0 21 103 33 115 4.20e-35 122
MS.gene004711.t1 AT3G27810 65.333 75 26 0 21 95 21 95 3.38e-33 116
MS.gene004711.t1 AT5G40350 65.333 75 26 0 21 95 18 92 8.12e-33 115
MS.gene004711.t1 AT3G01530 60.000 80 32 0 16 95 21 100 1.52e-31 112
MS.gene004711.t1 AT2G47190 53.684 95 43 1 9 102 8 102 1.60e-31 113
MS.gene004711.t1 AT1G68320 56.977 86 37 0 17 102 16 101 1.79e-31 114
MS.gene004711.t1 AT5G59780 59.494 79 32 0 17 95 5 83 6.59e-31 111
MS.gene004711.t1 AT3G46130 58.537 82 34 0 14 95 3 84 8.47e-31 111
MS.gene004711.t1 AT1G25340 62.667 75 28 0 21 95 19 93 1.04e-30 112
MS.gene004711.t1 AT2G32460 58.140 86 36 0 10 95 8 93 4.70e-30 113
MS.gene004711.t1 AT5G49620 57.426 101 43 0 14 114 20 120 5.57e-30 110
MS.gene004711.t1 AT5G26660 59.036 83 34 0 13 95 5 87 2.49e-29 109
MS.gene004711.t1 AT3G11440 62.667 75 28 0 21 95 42 116 2.66e-29 111
MS.gene004711.t1 AT3G11440 62.667 75 28 0 21 95 42 116 6.51e-29 110
MS.gene004711.t1 AT3G11440 62.667 75 28 0 21 95 42 116 6.51e-29 110
MS.gene004711.t1 AT3G11440 62.667 75 28 0 21 95 42 116 6.51e-29 110
MS.gene004711.t1 AT2G32460 62.667 75 28 0 21 95 7 81 8.31e-29 109
MS.gene004711.t1 AT4G01680 49.524 105 52 1 13 116 5 109 1.03e-28 105
MS.gene004711.t1 AT3G61250 49.485 97 48 1 21 116 13 109 1.39e-28 106
MS.gene004711.t1 AT5G14750 42.188 128 71 2 18 142 14 141 1.40e-28 104
MS.gene004711.t1 AT1G57560 48.571 105 53 1 13 116 5 109 1.46e-28 106
MS.gene004711.t1 AT4G34990 55.682 88 39 0 14 101 6 93 1.64e-28 105
MS.gene004711.t1 AT1G22640 56.098 82 36 0 14 95 6 87 1.76e-28 105
MS.gene004711.t1 AT1G57560 48.571 105 53 1 13 116 5 109 2.62e-28 106
MS.gene004711.t1 AT5G06100 61.333 75 29 0 21 95 33 107 2.99e-28 108
MS.gene004711.t1 AT4G28110 56.000 75 33 0 21 95 13 87 4.03e-28 105
MS.gene004711.t1 AT4G01680 49.524 105 52 1 13 116 5 109 4.75e-28 105
MS.gene004711.t1 AT5G06100 61.333 75 29 0 21 95 33 107 5.85e-28 107
MS.gene004711.t1 AT5G06100 61.333 75 29 0 21 95 33 107 5.85e-28 107
MS.gene004711.t1 AT5G06100 61.333 75 29 0 21 95 33 107 5.85e-28 107
MS.gene004711.t1 AT5G06100 61.333 75 29 0 21 95 33 107 5.85e-28 107
MS.gene004711.t1 AT5G49620 61.798 89 34 0 14 102 20 108 6.81e-28 105
MS.gene004711.t1 AT2G26960 63.158 76 28 0 20 95 20 95 7.19e-28 106
MS.gene004711.t1 AT1G06180 57.333 75 32 0 21 95 13 87 8.87e-28 103
MS.gene004711.t1 AT5G16770 46.078 102 50 1 16 112 8 109 9.46e-28 105
MS.gene004711.t1 AT5G16770 46.078 102 50 1 16 112 8 109 9.46e-28 105
MS.gene004711.t1 AT1G35515 47.115 104 50 1 14 112 6 109 9.89e-28 102
MS.gene004711.t1 AT5G16770 46.078 102 50 1 16 112 8 109 1.34e-27 104
MS.gene004711.t1 AT5G16770 46.078 102 50 1 16 112 8 109 1.34e-27 104
MS.gene004711.t1 AT3G06490 62.195 82 31 0 21 102 20 101 1.41e-27 104
MS.gene004711.t1 AT5G40330 49.425 87 44 0 16 102 8 94 1.62e-27 102
MS.gene004711.t1 AT2G16720 53.409 88 41 0 14 101 6 93 1.66e-27 103
MS.gene004711.t1 AT1G34670 55.000 80 36 0 16 95 8 87 1.85e-27 104
MS.gene004711.t1 AT4G21440 46.078 102 54 1 16 116 8 109 1.92e-27 104
MS.gene004711.t1 AT4G38620 46.154 104 51 1 14 112 6 109 2.24e-27 103
MS.gene004711.t1 AT5G07690 56.098 82 36 0 21 102 13 94 2.96e-27 103
MS.gene004711.t1 AT1G09540 47.619 105 54 1 13 116 5 109 3.11e-27 104
MS.gene004711.t1 AT3G01140 60.000 75 30 0 21 95 13 87 3.67e-27 103
MS.gene004711.t1 AT5G55020 50.515 97 47 1 21 116 27 123 3.84e-27 105
MS.gene004711.t1 AT4G05100 56.000 75 33 0 21 95 14 88 4.77e-27 103
MS.gene004711.t1 AT5G07700 56.098 82 36 0 21 102 13 94 5.36e-27 103
MS.gene004711.t1 AT5G07700 56.098 82 36 0 21 102 13 94 5.36e-27 103
MS.gene004711.t1 AT3G01140 60.000 75 30 0 21 95 56 130 5.63e-27 103
MS.gene004711.t1 AT5G54230 56.000 75 33 0 21 95 13 87 6.05e-27 102
MS.gene004711.t1 AT3G13540 48.454 97 45 1 21 112 24 120 7.16e-27 101
MS.gene004711.t1 AT4G09460 54.878 82 37 0 14 95 6 87 7.35e-27 100
MS.gene004711.t1 AT5G15310 49.485 97 44 2 21 112 13 109 7.73e-27 100
MS.gene004711.t1 AT5G61420 54.878 82 37 0 21 102 13 94 8.67e-27 103
MS.gene004711.t1 AT5G60890 43.200 125 64 3 16 135 8 130 1.09e-26 101
MS.gene004711.t1 AT3G53200 55.000 80 36 0 16 95 5 84 1.10e-26 100
MS.gene004711.t1 AT5G10280 45.370 108 57 2 11 116 2 109 1.18e-26 102
MS.gene004711.t1 AT2G31180 56.000 75 33 0 21 95 13 87 1.45e-26 100
MS.gene004711.t1 AT5G65230 55.000 80 36 0 16 95 8 87 1.45e-26 101
MS.gene004711.t1 AT5G15310 58.667 75 31 0 21 95 13 87 1.60e-26 101
MS.gene004711.t1 AT5G15310 58.667 75 31 0 21 95 13 87 1.71e-26 101
MS.gene004711.t1 AT3G02940 53.750 80 37 0 16 95 8 87 1.99e-26 101
MS.gene004711.t1 AT4G12350 57.333 75 32 0 21 95 13 87 2.34e-26 100
MS.gene004711.t1 AT4G22680 57.333 75 32 0 21 95 13 87 2.81e-26 100
MS.gene004711.t1 AT3G02940 53.750 80 37 0 16 95 8 87 2.82e-26 100
MS.gene004711.t1 AT3G02940 53.750 80 37 0 16 95 8 87 2.82e-26 100
MS.gene004711.t1 AT1G25340 58.667 75 26 1 21 95 19 88 3.94e-26 99.8
MS.gene004711.t1 AT1G74080 60.000 75 30 0 21 95 13 87 3.97e-26 100
MS.gene004711.t1 AT1G74430 48.039 102 51 1 8 109 2 101 5.58e-26 99.4
MS.gene004711.t1 AT3G13890 51.807 83 40 0 13 95 5 87 7.33e-26 100
MS.gene004711.t1 AT1G25340 58.667 75 26 1 21 95 19 88 7.84e-26 99.8
MS.gene004711.t1 AT3G27920 53.750 80 37 0 16 95 10 89 8.12e-26 97.8
MS.gene004711.t1 AT3G47600 57.333 75 32 0 21 95 13 87 2.51e-25 98.6
MS.gene004711.t1 AT3G12720 51.948 77 37 0 19 95 21 97 3.52e-25 97.8
MS.gene004711.t1 AT1G18570 57.333 75 32 0 21 95 14 88 4.15e-25 98.2
MS.gene004711.t1 AT4G01680 44.444 117 52 2 13 116 5 121 7.99e-25 97.4
MS.gene004711.t1 AT5G49330 57.333 75 32 0 21 95 13 87 9.40e-25 97.4
MS.gene004711.t1 AT1G66230 53.333 75 35 0 21 95 13 87 1.04e-24 96.3
MS.gene004711.t1 AT3G62610 55.405 74 33 0 21 94 13 86 1.47e-24 96.7
MS.gene004711.t1 AT5G62470 56.000 75 33 0 21 95 13 87 1.56e-24 96.7
MS.gene004711.t1 AT4G26930 48.454 97 49 1 21 116 20 116 1.88e-24 97.1
MS.gene004711.t1 AT1G74650 47.423 97 46 2 21 112 13 109 2.20e-24 96.3
MS.gene004711.t1 AT2G47460 54.667 75 34 0 21 95 13 87 2.59e-24 96.7
MS.gene004711.t1 AT3G48920 55.696 79 35 0 17 95 15 93 2.87e-24 94.7
MS.gene004711.t1 AT5G62320 51.111 90 37 1 21 103 14 103 2.99e-24 94.4
MS.gene004711.t1 AT1G56160 46.341 82 44 0 14 95 8 89 3.17e-24 95.1
MS.gene004711.t1 AT3G08500 54.545 77 35 0 19 95 29 105 3.50e-24 95.9
MS.gene004711.t1 AT4G17785 46.392 97 47 1 21 112 14 110 3.54e-24 95.9
MS.gene004711.t1 AT4G17785 46.392 97 47 1 21 112 14 110 3.77e-24 95.9
MS.gene004711.t1 AT3G23250 50.667 75 37 0 21 95 13 87 3.87e-24 94.7
MS.gene004711.t1 AT5G12870 42.857 105 59 1 13 116 11 115 4.00e-24 94.7
MS.gene004711.t1 AT5G52600 42.574 101 53 1 21 116 13 113 4.86e-24 92.4
MS.gene004711.t1 AT5G35550 46.591 88 47 0 8 95 2 89 4.97e-24 94.0
MS.gene004711.t1 AT5G16600 54.667 75 34 0 21 95 13 87 7.89e-24 94.7
MS.gene004711.t1 AT1G63910 48.193 83 43 0 13 95 5 87 1.79e-23 94.4
MS.gene004711.t1 AT1G08810 45.361 97 48 2 21 112 13 109 2.31e-23 92.4
MS.gene004711.t1 AT1G79180 47.561 82 43 0 14 95 8 89 2.34e-23 92.8
MS.gene004711.t1 AT3G28910 45.361 97 48 2 21 112 13 109 3.13e-23 92.8
MS.gene004711.t1 AT3G13890 46.739 92 40 1 13 95 5 96 4.51e-23 93.2
MS.gene004711.t1 AT5G14340 47.423 97 50 1 21 116 25 121 5.37e-23 91.7
MS.gene004711.t1 AT1G18710 46.465 99 51 1 8 106 2 98 5.68e-23 91.3
MS.gene004711.t1 AT3G28470 53.333 75 35 0 21 95 13 87 7.67e-23 91.7
MS.gene004711.t1 AT5G56110 45.098 102 55 1 16 116 8 109 8.76e-23 91.7
MS.gene004711.t1 AT3G12820 39.091 110 62 1 8 112 2 111 9.79e-23 90.1
MS.gene004711.t1 AT1G16490 48.052 77 40 0 19 95 13 89 2.13e-22 89.7
MS.gene004711.t1 AT5G62470 54.667 75 33 1 21 95 13 86 4.47e-22 90.1
MS.gene004711.t1 AT4G25560 51.282 78 38 0 18 95 8 85 1.50e-21 87.8
MS.gene004711.t1 AT5G52260 53.165 79 37 0 17 95 9 87 3.15e-21 86.7
MS.gene004711.t1 AT4G37780 46.429 84 44 1 21 103 13 96 1.81e-20 85.1
MS.gene004711.t1 AT1G66370 41.237 97 52 1 21 112 9 105 2.91e-20 83.6
MS.gene004711.t1 AT5G23000 46.341 82 43 1 14 94 6 87 7.38e-20 84.0
MS.gene004711.t1 AT2G36890 47.561 82 42 1 21 101 13 94 1.11e-19 83.2
MS.gene004711.t1 AT2G36890 47.561 82 42 1 21 101 54 135 1.62e-19 83.2
MS.gene004711.t1 AT3G60460 50.000 76 37 1 21 95 12 87 2.37e-19 82.0
MS.gene004711.t1 AT2G26950 41.837 98 52 2 20 112 16 113 1.55e-18 80.9
MS.gene004711.t1 AT5G65790 44.048 84 46 1 21 103 13 96 2.34e-18 80.1
MS.gene004711.t1 AT5G57620 44.048 84 46 1 21 103 13 96 2.59e-18 79.7
MS.gene004711.t1 AT3G49690 44.048 84 46 1 21 103 13 96 4.07e-18 79.0
MS.gene004711.t1 AT1G66380 42.268 97 51 1 21 112 9 105 7.76e-18 75.1
MS.gene004711.t1 AT1G66380 49.367 79 40 0 21 99 9 87 9.06e-18 73.9
MS.gene004711.t1 AT3G27810 69.767 43 13 0 53 95 4 46 1.22e-17 75.5
MS.gene004711.t1 AT1G56650 42.268 97 51 1 21 112 9 105 1.83e-17 76.3
MS.gene004711.t1 AT1G79180 34.513 113 41 1 16 95 10 122 4.36e-17 76.3
MS.gene004711.t1 AT5G40350 67.442 43 14 0 53 95 5 47 9.96e-17 72.8
MS.gene004711.t1 AT1G66390 42.268 97 51 1 21 112 9 105 1.35e-16 73.9
MS.gene004711.t1 AT3G27785 49.333 75 35 2 22 95 189 261 1.60e-16 75.5
MS.gene004711.t1 AT3G46130 70.455 44 13 0 52 95 9 52 1.64e-16 73.6
MS.gene004711.t1 AT3G46130 57.627 59 21 1 37 95 8 62 2.39e-16 73.2
MS.gene004711.t1 AT5G59780 54.688 64 25 1 32 95 3 62 2.40e-16 72.8
MS.gene004711.t1 AT5G58850 50.667 75 34 2 22 95 105 177 2.86e-16 74.7
MS.gene004711.t1 AT5G11050 49.333 75 35 2 22 95 105 177 4.30e-16 73.9
MS.gene004711.t1 AT5G26660 72.093 43 12 0 53 95 14 56 4.92e-16 73.6
MS.gene004711.t1 AT4G37260 46.667 75 37 2 22 95 13 85 9.99e-16 72.4
MS.gene004711.t1 AT2G23290 44.828 87 44 3 10 95 2 85 2.15e-15 71.6
MS.gene004711.t1 AT3G53200 67.442 43 14 0 53 95 9 51 5.39e-15 68.9
MS.gene004711.t1 AT4G18770 40.000 85 48 2 12 95 207 289 1.82e-14 69.3
MS.gene004711.t1 AT2G39880 45.122 82 42 2 22 102 50 129 3.13e-14 68.6
MS.gene004711.t1 AT3G55730 42.683 82 44 2 22 102 56 135 6.31e-14 67.8
MS.gene004711.t1 AT3G09230 45.122 82 42 2 22 102 55 134 8.69e-14 67.4
MS.gene004711.t1 AT5G40360 37.500 96 58 2 22 116 158 252 1.12e-13 67.0
MS.gene004711.t1 AT5G11510 41.333 75 41 2 22 95 81 153 1.44e-13 67.0
MS.gene004711.t1 AT5G11510 41.333 75 41 2 22 95 81 153 1.46e-13 67.0
MS.gene004711.t1 AT5G11510 41.333 75 41 2 22 95 81 153 1.46e-13 67.0
MS.gene004711.t1 AT5G11510 41.333 75 41 2 22 95 81 153 1.46e-13 67.0
MS.gene004711.t1 AT5G11510 41.333 75 41 2 22 95 81 153 1.46e-13 67.0
MS.gene004711.t1 AT5G02320 44.000 75 39 2 22 95 127 199 3.43e-13 65.9
MS.gene004711.t1 AT5G02320 44.000 75 39 2 22 95 127 199 3.43e-13 65.9
MS.gene004711.t1 AT5G02320 44.000 75 39 2 22 95 67 139 4.18e-13 65.5
MS.gene004711.t1 AT4G32730 42.667 75 40 2 22 95 87 159 1.41e-12 64.3
MS.gene004711.t1 AT4G32730 42.667 75 40 2 22 95 87 159 1.42e-12 64.3
MS.gene004711.t1 AT4G32730 42.667 75 40 2 22 95 87 159 1.42e-12 64.3
MS.gene004711.t1 AT4G32730 42.667 75 40 2 22 95 87 159 1.42e-12 64.3
MS.gene004711.t1 AT4G32730 42.667 75 40 2 22 95 87 159 1.42e-12 64.3
MS.gene004711.t1 AT3G09370 42.667 75 40 2 22 95 135 207 2.40e-12 63.5
MS.gene004711.t1 AT3G09370 42.667 75 40 2 22 95 143 215 2.53e-12 63.5
MS.gene004711.t1 AT3G09370 42.667 75 40 2 22 95 130 202 2.56e-12 63.5
MS.gene004711.t1 AT3G50060 40.000 75 42 2 22 95 6 78 3.15e-12 62.8
MS.gene004711.t1 AT2G37630 40.741 81 46 1 25 103 7 87 4.40e-12 62.4
MS.gene004711.t1 AT3G12820 45.161 62 29 1 56 112 2 63 5.30e-12 60.8
MS.gene004711.t1 AT3G47600 62.791 43 16 0 53 95 39 81 5.71e-12 62.0
MS.gene004711.t1 AT5G67300 41.333 75 41 2 22 95 6 78 7.99e-12 61.6
MS.gene004711.t1 AT5G35550 54.167 48 22 0 48 95 45 92 8.09e-12 61.2
MS.gene004711.t1 AT5G14750 38.889 90 52 2 56 142 18 107 2.71e-11 58.5
MS.gene004711.t1 AT1G69560 40.000 75 42 2 22 95 123 195 7.76e-11 58.9
MS.gene004711.t1 AT1G69560 40.000 75 42 2 22 95 107 179 8.41e-11 58.9

Find 39 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTTAAGGTCTGGTCTT+AGG 0.259563 1.1:+55113514 None:intergenic
ATTTCTTTCAATATGTATTC+AGG 0.268017 1.1:-55113976 None:intergenic
AACTCTGTCTCTAGGCTTGC+AGG 0.297134 1.1:-55113829 MS.gene004711:intron
GTGTTATCTGACCCTTCTTA+AGG 0.320325 1.1:+55113502 None:intergenic
TTTACAGGGCTGAGAAGAAA+TGG 0.355023 1.1:-55113567 MS.gene004711:intron
GTGTAATGGAAGAAGATAGA+TGG 0.371974 1.1:-55113927 MS.gene004711:CDS
ATCTGACCCTTCTTAAGGTC+TGG 0.379207 1.1:+55113507 None:intergenic
AGAATTTGTGGGATGAACTT+TGG 0.380605 1.1:-55112901 MS.gene004711:CDS
TGGAACTTGGATGATGCTCT+TGG 0.418349 1.1:-55112881 MS.gene004711:CDS
TACATGCTAGGTGGGGAAAC+AGG 0.437338 1.1:-55113452 MS.gene004711:intron
ACTACATTGTGCACATTGGC+TGG 0.456615 1.1:+55112827 None:intergenic
CTTCAAATGAAGAGAATTTG+TGG 0.464547 1.1:-55112913 MS.gene004711:CDS
CAATATGTATTCAGGAATGA+TGG 0.474198 1.1:-55113968 None:intergenic
TTACAGGGCTGAGAAGAAAT+GGG 0.476247 1.1:-55113566 MS.gene004711:intron
GTGGGATGAACTTTGGAACT+TGG 0.486294 1.1:-55112894 MS.gene004711:CDS
CCTAGAGCTACATGCTAGGT+GGG 0.498599 1.1:-55113460 MS.gene004711:CDS
AGCTGCATGGTGAAGGCAGA+TGG 0.509674 1.1:-55113852 MS.gene004711:CDS
TTCAAATGAAGAGAATTTGT+GGG 0.514100 1.1:-55112912 MS.gene004711:CDS
CCCACCTAGCATGTAGCTCT+AGG 0.519377 1.1:+55113460 None:intergenic
CCTAAGACCAGACCTTAAGA+AGG 0.523078 1.1:-55113514 MS.gene004711:CDS
GCAGATGGAACTCTGTCTCT+AGG 0.556467 1.1:-55113837 MS.gene004711:CDS
ATAGATGGAGGAAAGGACCT+TGG 0.564310 1.1:-55113912 MS.gene004711:CDS
GAAGAAGATAGATGGAGGAA+AGG 0.569212 1.1:-55113919 MS.gene004711:CDS
GGAAAAGTTGTAGACTGAGA+TGG 0.570618 1.1:-55113545 MS.gene004711:CDS
GGAATGATGGAAGGAAACAC+TGG 0.575742 1.1:-55113955 MS.gene004711:CDS
AAACACTGGATGGAGTGTAA+TGG 0.585481 1.1:-55113941 MS.gene004711:CDS
GAAAAGTTGTAGACTGAGAT+GGG 0.586925 1.1:-55113544 MS.gene004711:CDS
GAAAGGACCTTGGACTTCTG+AGG 0.594052 1.1:-55113902 MS.gene004711:CDS
TAATGGAAGAAGATAGATGG+AGG 0.601607 1.1:-55113924 MS.gene004711:CDS
ATGTATTCAGGAATGATGGA+AGG 0.607186 1.1:-55113964 MS.gene004711:CDS
TTGTCTTCCTCAGAAGTCCA+AGG 0.607855 1.1:+55113895 None:intergenic
TATGTCAAGCTGCATGGTGA+AGG 0.610102 1.1:-55113859 MS.gene004711:CDS
TGATGGAAGGAAACACTGGA+TGG 0.616620 1.1:-55113951 MS.gene004711:CDS
TCCTAGAGCTACATGCTAGG+TGG 0.619467 1.1:-55113461 MS.gene004711:CDS
AGCAACTACATTGTGCACAT+TGG 0.622143 1.1:+55112823 None:intergenic
TAATCCTAGAGCTACATGCT+AGG 0.625705 1.1:-55113464 MS.gene004711:CDS
CTAAGACCAGACCTTAAGAA+GGG 0.632926 1.1:-55113513 MS.gene004711:CDS
CTAGAGCTACATGCTAGGTG+GGG 0.652296 1.1:-55113459 MS.gene004711:CDS
ATTGAGTATGTCAAGCTGCA+TGG 0.654811 1.1:-55113865 MS.gene004711:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATATATGATCAATA+AGG + chr1.1:55113190-55113209 None:intergenic 10.0%
!! AAATAACAAGTAAAATTAAT+TGG - chr1.1:55113097-55113116 MS.gene004711:intron 10.0%
!! TAAGAATTGTAAGAAAAAAA+TGG + chr1.1:55113164-55113183 None:intergenic 15.0%
!! TACTAAATAAAAAACATTTC+AGG - chr1.1:55113457-55113476 MS.gene004711:CDS 15.0%
!!! GATCATATATTATTTTTACA+GGG - chr1.1:55113194-55113213 MS.gene004711:intron 15.0%
!!! TGATCATATATTATTTTTAC+AGG - chr1.1:55113193-55113212 MS.gene004711:intron 15.0%
!! AATTGGTATTAATTAAACCA+AGG + chr1.1:55113039-55113058 None:intergenic 20.0%
!! AATTGTAAGAAAAAAATGGA+TGG + chr1.1:55113160-55113179 None:intergenic 20.0%
!! ACAAAAATGTGTATAAAGTT+TGG + chr1.1:55112988-55113007 None:intergenic 20.0%
!! TAAATAAAAAACATTTCAGG+TGG - chr1.1:55113460-55113479 MS.gene004711:CDS 20.0%
! AATACAACATGGATATGAAA+GGG - chr1.1:55113676-55113695 MS.gene004711:intron 25.0%
! ACAATGAGATAAAGAACTAT+TGG - chr1.1:55113517-55113536 MS.gene004711:CDS 25.0%
! CAATTTACCAAGTAGAAATT+TGG + chr1.1:55113125-55113144 None:intergenic 25.0%
! TTCAAATGAAGAGAATTTGT+GGG - chr1.1:55113863-55113882 MS.gene004711:CDS 25.0%
ACTTCTAATGTGAAGTCAAT+TGG + chr1.1:55113056-55113075 None:intergenic 30.0%
ATGAGATAAAGAACTATTGG+AGG - chr1.1:55113520-55113539 MS.gene004711:CDS 30.0%
CAATACAACATGGATATGAA+AGG - chr1.1:55113675-55113694 MS.gene004711:intron 30.0%
CTTCAAATGAAGAGAATTTG+TGG - chr1.1:55113862-55113881 MS.gene004711:CDS 30.0%
TAACATAGTACTTTGTACCT+TGG - chr1.1:55113019-55113038 MS.gene004711:intron 30.0%
TCTATGCTCAATGATAATAG+TGG - chr1.1:55113819-55113838 MS.gene004711:intron 30.0%
! AAGGTACAAAGTACTATGTT+AGG + chr1.1:55113020-55113039 None:intergenic 30.0%
ACAACAACTGCAATACAACA+TGG - chr1.1:55113665-55113684 MS.gene004711:intron 35.0%
AGAATTTGTGGGATGAACTT+TGG - chr1.1:55113874-55113893 MS.gene004711:CDS 35.0%
CGAAAAATCGTTCTTTCAAG+AGG - chr1.1:55113592-55113611 MS.gene004711:intron 35.0%
CTAGAAACACGTAAGTTCAA+GGG + chr1.1:55113367-55113386 None:intergenic 35.0%
GAAAAGTTGTAGACTGAGAT+GGG - chr1.1:55113231-55113250 MS.gene004711:intron 35.0%
TAATGGAAGAAGATAGATGG+AGG - chr1.1:55112851-55112870 MS.gene004711:CDS 35.0%
TCTAGAAACACGTAAGTTCA+AGG + chr1.1:55113368-55113387 None:intergenic 35.0%
TTCTCAAGAGACACAAGAAA+TGG - chr1.1:55113752-55113771 MS.gene004711:intron 35.0%
TTCTTGTGTATCAGCATACA+TGG + chr1.1:55113781-55113800 None:intergenic 35.0%
! ATGTATTCAGGAATGATGGA+AGG - chr1.1:55112811-55112830 MS.gene004711:CDS 35.0%
! ATTGGCTCCAAATTTCTACT+TGG - chr1.1:55113115-55113134 MS.gene004711:intron 35.0%
! GTGTAATGGAAGAAGATAGA+TGG - chr1.1:55112848-55112867 MS.gene004711:CDS 35.0%
AAACACTGGATGGAGTGTAA+TGG - chr1.1:55112834-55112853 MS.gene004711:CDS 40.0%
AACAATTGCAAGAAGCTTGC+CGG - chr1.1:55113485-55113504 MS.gene004711:CDS 40.0%
AGCAACTACATTGTGCACAT+TGG + chr1.1:55113955-55113974 None:intergenic 40.0%
ATCTCATTGTCAGTTCTTCC+CGG + chr1.1:55113507-55113526 None:intergenic 40.0%
ATTGAGTATGTCAAGCTGCA+TGG - chr1.1:55112910-55112929 MS.gene004711:CDS 40.0%
CTAAGACCAGACCTTAAGAA+GGG - chr1.1:55113262-55113281 MS.gene004711:intron 40.0%
GAAGAAGATAGATGGAGGAA+AGG - chr1.1:55112856-55112875 MS.gene004711:CDS 40.0%
GCTGATACACAAGAACAACA+GGG - chr1.1:55113786-55113805 MS.gene004711:intron 40.0%
GGAAAAGTTGTAGACTGAGA+TGG - chr1.1:55113230-55113249 MS.gene004711:intron 40.0%
GTGTTATCTGACCCTTCTTA+AGG + chr1.1:55113276-55113295 None:intergenic 40.0%
TAATCCTAGAGCTACATGCT+AGG - chr1.1:55113311-55113330 MS.gene004711:intron 40.0%
TGCTGATACACAAGAACAAC+AGG - chr1.1:55113785-55113804 MS.gene004711:intron 40.0%
TGTGTCTCTTGAGAAGTAGA+AGG + chr1.1:55113747-55113766 None:intergenic 40.0%
TTACAGGGCTGAGAAGAAAT+GGG - chr1.1:55113209-55113228 MS.gene004711:intron 40.0%
TTTACAGGGCTGAGAAGAAA+TGG - chr1.1:55113208-55113227 MS.gene004711:intron 40.0%
!! GATCATAGACTTGTTGCTTG+AGG - chr1.1:55113698-55113717 MS.gene004711:intron 40.0%
ACAATTGCAAGAAGCTTGCC+GGG - chr1.1:55113486-55113505 MS.gene004711:CDS 45.0%
ACTACATTGTGCACATTGGC+TGG + chr1.1:55113951-55113970 None:intergenic 45.0%
ATAGATGGAGGAAAGGACCT+TGG - chr1.1:55112863-55112882 MS.gene004711:CDS 45.0%
ATCTGACCCTTCTTAAGGTC+TGG + chr1.1:55113271-55113290 None:intergenic 45.0%
CCTAAGACCAGACCTTAAGA+AGG - chr1.1:55113261-55113280 MS.gene004711:intron 45.0%
TATGTCAAGCTGCATGGTGA+AGG - chr1.1:55112916-55112935 MS.gene004711:CDS 45.0%
TGATGGAAGGAAACACTGGA+TGG - chr1.1:55112824-55112843 MS.gene004711:CDS 45.0%
TGGAACTTGGATGATGCTCT+TGG - chr1.1:55113894-55113913 MS.gene004711:CDS 45.0%
TTGTCTTCCTCAGAAGTCCA+AGG + chr1.1:55112883-55112902 None:intergenic 45.0%
! AGCACTATCAGAGGGGTTTT+TGG + chr1.1:55113565-55113584 None:intergenic 45.0%
! CCTTCTTAAGGTCTGGTCTT+AGG + chr1.1:55113264-55113283 None:intergenic 45.0%
! CCTTTTCAGCACTATCAGAG+GGG + chr1.1:55113572-55113591 None:intergenic 45.0%
! GCCTTTTCAGCACTATCAGA+GGG + chr1.1:55113573-55113592 None:intergenic 45.0%
! GGAATGATGGAAGGAAACAC+TGG - chr1.1:55112820-55112839 MS.gene004711:CDS 45.0%
!! GTGGGATGAACTTTGGAACT+TGG - chr1.1:55113881-55113900 MS.gene004711:CDS 45.0%
AACTCTGTCTCTAGGCTTGC+AGG - chr1.1:55112946-55112965 MS.gene004711:intron 50.0%
CCTAGAGCTACATGCTAGGT+GGG - chr1.1:55113315-55113334 MS.gene004711:intron 50.0%
CTAGAGCTACATGCTAGGTG+GGG - chr1.1:55113316-55113335 MS.gene004711:intron 50.0%
GAAAGGACCTTGGACTTCTG+AGG - chr1.1:55112873-55112892 MS.gene004711:CDS 50.0%
GCAGATGGAACTCTGTCTCT+AGG - chr1.1:55112938-55112957 MS.gene004711:CDS 50.0%
TACATGCTAGGTGGGGAAAC+AGG - chr1.1:55113323-55113342 MS.gene004711:intron 50.0%
TCCTAGAGCTACATGCTAGG+TGG - chr1.1:55113314-55113333 MS.gene004711:intron 50.0%
! CCCCTCTGATAGTGCTGAAA+AGG - chr1.1:55113569-55113588 MS.gene004711:intron 50.0%
! CGCCTTTTCAGCACTATCAG+AGG + chr1.1:55113574-55113593 None:intergenic 50.0%
ACCCGTGTCGTAACGCAACA+CGG + chr1.1:55113417-55113436 None:intergenic 55.0%
ACCCGTGTTGCGTTACGACA+CGG - chr1.1:55113412-55113431 MS.gene004711:intron 55.0%
AGCTGCATGGTGAAGGCAGA+TGG - chr1.1:55112923-55112942 MS.gene004711:CDS 55.0%
CCCACCTAGCATGTAGCTCT+AGG + chr1.1:55113318-55113337 None:intergenic 55.0%
CCCGTGTCGTAACGCAACAC+GGG + chr1.1:55113416-55113435 None:intergenic 60.0%
CCCGTGTTGCGTTACGACAC+GGG - chr1.1:55113413-55113432 MS.gene004711:intron 60.0%
GTCGTAACGCAACACGGGTC+TGG + chr1.1:55113411-55113430 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 55112811 55113986 55112811 ID=MS.gene004711
chr1.1 mRNA 55112811 55113986 55112811 ID=MS.gene004711.t1;Parent=MS.gene004711
chr1.1 exon 55113830 55113986 55113830 ID=MS.gene004711.t1.exon1;Parent=MS.gene004711.t1
chr1.1 CDS 55113830 55113986 55113830 ID=cds.MS.gene004711.t1;Parent=MS.gene004711.t1
chr1.1 exon 55113453 55113582 55113453 ID=MS.gene004711.t1.exon2;Parent=MS.gene004711.t1
chr1.1 CDS 55113453 55113582 55113453 ID=cds.MS.gene004711.t1;Parent=MS.gene004711.t1
chr1.1 exon 55112811 55112958 55112811 ID=MS.gene004711.t1.exon3;Parent=MS.gene004711.t1
chr1.1 CDS 55112811 55112958 55112811 ID=cds.MS.gene004711.t1;Parent=MS.gene004711.t1
Gene Sequence

>MS.gene004711

ATGTATTCAGGAATGATGGAAGGAAACACTGGATGGAGTGTAATGGAAGAAGATAGATGGAGGAAAGGACCTTGGACTTCTGAGGAAGACAAATTACTCATTGAGTATGTCAAGCTGCATGGTGAAGGCAGATGGAACTCTGTCTCTAGGCTTGCAGGTACATACATGATACAACCAAACTTTATACACATTTTTGTATTTTAATTCCTAACATAGTACTTTGTACCTTGGTTTAATTAATACCAATTGACTTCACATTAGAAGTGACAGCACAATTATTATAGCAAAATAACAAGTAAAATTAATTGGCTCCAAATTTCTACTTGGTAAATTGACTTCTGTTTTACCATCCATTTTTTTCTTACAATTCTTAACTCCTTATTGATCATATATTATTTTTACAGGGCTGAGAAGAAATGGGAAAAGTTGTAGACTGAGATGGGTGAACTACCTAAGACCAGACCTTAAGAAGGGTCAGATAACACAACAAGAAGAAAGCATAATCCTAGAGCTACATGCTAGGTGGGGAAACAGGTACAAATTTGAACTATGTCCCTTGAACTTACGTGTTTCTAGACACGTGCAGTGACACTTTATCCAGACCCGTGTTGCGTTACGACACGGGTTAATGCTTCTAGTTGATTATTACTAAATAAAAAACATTTCAGGTGGTCAACAATTGCAAGAAGCTTGCCGGGAAGAACTGACAATGAGATAAAGAACTATTGGAGGACTCATTTCAAGAAAAAGACCAAAAACCCCTCTGATAGTGCTGAAAAGGCGAAAAATCGTTCTTTCAAGAGGCAGCAACAACAACAATTGAAGAAACAACAGCAACAAGTTCAGATGCAGCAACAACAACTGCAATACAACATGGATATGAAAGGGATCATAGACTTGTTGCTTGAGGAAAATGACTACTGTACTAGTGTGCCTTCTACTTCTCAAGAGACACAAGAAATGGTTTCCATGTATGCTGATACACAAGAACAACAGGGTTGCTTTTATTCTATGCTCAATGATAATAGTGGTAATGTCTATGCACAAGAGTCTTCAAATGAAGAGAATTTGTGGGATGAACTTTGGAACTTGGATGATGCTCTTGGAAATTCAATGCAGCTAATGCTTCAAGCAAAGCCAGCCAATGTGCACAATGTAGTTGCTCCCTTTTGTTAA
Protein sequence

>MS.gene004711.t1

MYSGMMEGNTGWSVMEEDRWRKGPWTSEEDKLLIEYVKLHGEGRWNSVSRLAGLRRNGKSCRLRWVNYLRPDLKKGQITQQEESIILELHARWGNSGNVYAQESSNEENLWDELWNLDDALGNSMQLMLQAKPANVHNVVAPFC