Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004974.t1 | XP_013468873.1 | 97.6 | 166 | 4 | 0 | 18 | 183 | 1 | 166 | 1.20E-94 | 355.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004974.t1 | Q9ZUA9 | 44.3 | 61 | 29 | 2 | 38 | 94 | 634 | 693 | 1.6e-07 | 57.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004974.t1 | A0A072VXY1 | 97.6 | 166 | 4 | 0 | 18 | 183 | 1 | 166 | 8.5e-95 | 355.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene004974.t1 | TR | PHD |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004974.t1 | MTR_1g077940 | 97.590 | 166 | 4 | 0 | 18 | 183 | 1 | 166 | 4.77e-117 | 358 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004974.t1 | AT1G32810 | 58.721 | 172 | 43 | 5 | 18 | 183 | 1 | 150 | 2.59e-60 | 202 |
MS.gene004974.t1 | AT4G10600 | 53.548 | 155 | 46 | 5 | 29 | 183 | 3 | 131 | 5.92e-45 | 149 |
MS.gene004974.t1 | AT4G10600 | 53.548 | 155 | 46 | 5 | 29 | 183 | 3 | 131 | 5.92e-45 | 149 |
Find 70 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTTGTTCTCGTTACGTTAA+AGG | 0.115003 | 1.3:+55646864 | MS.gene004974:CDS |
GTAATGGAATTGCTTCTTCT+AGG | 0.283051 | 1.3:+55647036 | MS.gene004974:CDS |
TCCGACAAAGACGATTTCTT+TGG | 0.305436 | 1.3:+55646989 | MS.gene004974:CDS |
GAAAGTGGAACGAGTAAGTT+AGG | 0.313802 | 1.3:+55647428 | MS.gene004974:CDS |
GGAAGAGAGGGTTCATGTTC+AGG | 0.324299 | 1.3:+55647109 | MS.gene004974:CDS |
CGCGGAGGCCGTTTAAGCTT+TGG | 0.332311 | 1.3:+55647072 | MS.gene004974:CDS |
ACAGATCGCGGCGGCGGTGG+TGG | 0.386705 | 1.3:+55646690 | MS.gene004974:CDS |
GTTCATGTTCAGGGGATGCC+TGG | 0.398974 | 1.3:+55647119 | MS.gene004974:CDS |
TGGGGATCCTGAGTTGTTTG+AGG | 0.400920 | 1.3:+55647142 | MS.gene004974:CDS |
GACGATTTCTTTGGAGAGAA+GGG | 0.413823 | 1.3:+55646998 | MS.gene004974:CDS |
GGGGATCCTGAGTTGTTTGA+GGG | 0.415902 | 1.3:+55647143 | MS.gene004974:CDS |
TCGTCCGGTGGTGGATCCAT+CGG | 0.418211 | 1.3:-55646738 | None:intergenic |
ACGAATGGGTCGACGGTTCA+TGG | 0.430074 | 1.3:+55646757 | MS.gene004974:CDS |
ATGTTCAGGGGATGCCTGGT+GGG | 0.430907 | 1.3:+55647123 | MS.gene004974:CDS |
GGGATCGAGGCAGGGTAAGA+AGG | 0.432075 | 1.3:+55647397 | MS.gene004974:intron |
ATATCAGTCCAAAGCTTAAA+CGG | 0.438819 | 1.3:-55647080 | None:intergenic |
TCCAAAGAAATCGTCTTTGT+CGG | 0.451016 | 1.3:-55646990 | None:intergenic |
GGATCCACCACCGGACGAAT+GGG | 0.462593 | 1.3:+55646743 | MS.gene004974:CDS |
TAATGGAATTGCTTCTTCTA+GGG | 0.463404 | 1.3:+55647037 | MS.gene004974:CDS |
GGCGGTGGTGGGAGAATGAA+AGG | 0.468840 | 1.3:+55646702 | MS.gene004974:CDS |
GAAGAGAGGGTTCATGTTCA+GGG | 0.473759 | 1.3:+55647110 | MS.gene004974:CDS |
CTAGGGTTGCGTCGTGTTCG+CGG | 0.479128 | 1.3:+55647054 | MS.gene004974:CDS |
TCGACCCATTCGTCCGGTGG+TGG | 0.481651 | 1.3:-55646747 | None:intergenic |
CATGTTCAGGGGATGCCTGG+TGG | 0.491065 | 1.3:+55647122 | MS.gene004974:CDS |
CGTCCGGTGGTGGATCCATC+GGG | 0.500068 | 1.3:-55646737 | None:intergenic |
AGACGATTTCTTTGGAGAGA+AGG | 0.500714 | 1.3:+55646997 | MS.gene004974:CDS |
GCTTTGGACTGATATACCTA+TGG | 0.510874 | 1.3:+55647088 | MS.gene004974:CDS |
TGTTCAGGGGATGCCTGGTG+GGG | 0.518582 | 1.3:+55647124 | MS.gene004974:CDS |
TACAGAACAGATCGCGGCGG+CGG | 0.520072 | 1.3:+55646684 | MS.gene004974:CDS |
TGGATCCACCACCGGACGAA+TGG | 0.523746 | 1.3:+55646742 | MS.gene004974:CDS |
TTTCGACGATGGCGAAGAGA+TGG | 0.529901 | 1.3:+55646806 | MS.gene004974:CDS |
AGAACAGATCGCGGCGGCGG+TGG | 0.533283 | 1.3:+55646687 | MS.gene004974:CDS |
CCGCAGTTGTGGAAATGTAC+CGG | 0.535180 | 1.3:+55647191 | MS.gene004974:CDS |
CGCAGTTGTGGAAATGTACC+GGG | 0.536087 | 1.3:+55647192 | MS.gene004974:CDS |
AAAGTGGAACGAGTAAGTTA+GGG | 0.541809 | 1.3:+55647429 | MS.gene004974:CDS |
CTGCGCAACCTCAGTTTCCT+CGG | 0.542649 | 1.3:-55646952 | None:intergenic |
CGATTTCTTTGGAGAGAAGG+GGG | 0.545317 | 1.3:+55647000 | MS.gene004974:CDS |
CAGATCGCGGCGGCGGTGGT+GGG | 0.548454 | 1.3:+55646691 | MS.gene004974:CDS |
GAACCGTCGACCCATTCGTC+CGG | 0.551144 | 1.3:-55646753 | None:intergenic |
GGGAATGGTAATAGGAGTAA+TGG | 0.555778 | 1.3:+55647020 | MS.gene004974:CDS |
GGATCGAGGCAGGGTAAGAA+GGG | 0.565722 | 1.3:+55647398 | MS.gene004974:intron |
CCGTCGACCCATTCGTCCGG+TGG | 0.567949 | 1.3:-55646750 | None:intergenic |
CTGATATACCTATGGAAGAG+AGG | 0.573991 | 1.3:+55647096 | MS.gene004974:CDS |
TATTGTTCTCCGCTCCGACA+CGG | 0.579173 | 1.3:-55646929 | None:intergenic |
ACATGAACCCTCTCTTCCAT+AGG | 0.580837 | 1.3:-55647104 | None:intergenic |
TGAGTTGTTTGAGGGGAAGA+CGG | 0.583516 | 1.3:+55647151 | MS.gene004974:CDS |
GTCTTCCCCTCAAACAACTC+AGG | 0.589740 | 1.3:-55647149 | None:intergenic |
ACGATTTCTTTGGAGAGAAG+GGG | 0.591672 | 1.3:+55646999 | MS.gene004974:CDS |
TGATATACCTATGGAAGAGA+GGG | 0.595227 | 1.3:+55647097 | MS.gene004974:CDS |
CCACCGGACGAATGGGTCGA+CGG | 0.603852 | 1.3:+55646750 | MS.gene004974:CDS |
AACAACTCAGGATCCCCACC+AGG | 0.607787 | 1.3:-55647137 | None:intergenic |
TGCGGTGTCAATTTCGACGA+TGG | 0.608647 | 1.3:+55646795 | MS.gene004974:CDS |
GCGGTGGTGGGAGAATGAAA+GGG | 0.611312 | 1.3:+55646703 | MS.gene004974:CDS |
TCGCCCGATGGATCCACCAC+CGG | 0.611818 | 1.3:+55646734 | MS.gene004974:CDS |
AGTGCGATGAATGTGACGTA+TGG | 0.624264 | 1.3:+55646832 | MS.gene004974:CDS |
GTGCGATGAATGTGACGTAT+GGG | 0.630907 | 1.3:+55646833 | MS.gene004974:CDS |
ATGGGTCGACGGTTCATGGA+CGG | 0.634086 | 1.3:+55646761 | MS.gene004974:CDS |
GGGATCCTGAGTTGTTTGAG+GGG | 0.640575 | 1.3:+55647144 | MS.gene004974:CDS |
AGGGCGATCGAATCGCCCGA+TGG | 0.641334 | 1.3:+55646722 | MS.gene004974:CDS |
GAAGAACAACCGTGTCGGAG+CGG | 0.673126 | 1.3:+55646920 | MS.gene004974:CDS |
AAGAGAGGGTTCATGTTCAG+GGG | 0.674862 | 1.3:+55647111 | MS.gene004974:CDS |
GAACAATACCGAGGAAACTG+AGG | 0.686125 | 1.3:+55646944 | MS.gene004974:CDS |
GGTCGACGGTTCATGGACGG+TGG | 0.689534 | 1.3:+55646764 | MS.gene004974:CDS |
AAAGCGAAGAACAACCGTGT+CGG | 0.702603 | 1.3:+55646915 | MS.gene004974:CDS |
TGGACGGTGGACTGTATCTG+CGG | 0.707808 | 1.3:+55646777 | MS.gene004974:CDS |
GGGTTGCGTCGTGTTCGCGG+AGG | 0.708193 | 1.3:+55647057 | MS.gene004974:CDS |
CCGGTACATTTCCACAACTG+CGG | 0.719309 | 1.3:-55647191 | None:intergenic |
ATTGCTTACAGAACAGATCG+CGG | 0.723740 | 1.3:+55646678 | MS.gene004974:CDS |
CGGAGCGGAGAACAATACCG+AGG | 0.757334 | 1.3:+55646935 | MS.gene004974:CDS |
GCTTACAGAACAGATCGCGG+CGG | 0.787541 | 1.3:+55646681 | MS.gene004974:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | GAAAGAGGTTAATAATATGT+TGG | + | chr1.3:55647343-55647362 | MS.gene004974:intron | 25.0% |
! | GAGAATGAAAATGATGATAA+GGG | + | chr1.3:55647272-55647291 | MS.gene004974:intron | 25.0% |
! | TACTGAAAACTAAACTTCTT+AGG | - | chr1.3:55647224-55647243 | None:intergenic | 25.0% |
! | TGAGAATGAAAATGATGATA+AGG | + | chr1.3:55647271-55647290 | MS.gene004974:intron | 25.0% |
!!! | AGAAGTTTAGTTTTCAGTAT+AGG | + | chr1.3:55647225-55647244 | MS.gene004974:intron | 25.0% |
!!! | GAAGTTTAGTTTTCAGTATA+GGG | + | chr1.3:55647226-55647245 | MS.gene004974:intron | 25.0% |
ATATCAGTCCAAAGCTTAAA+CGG | - | chr1.3:55647083-55647102 | None:intergenic | 30.0% | |
TAATGGAATTGCTTCTTCTA+GGG | + | chr1.3:55647037-55647056 | MS.gene004974:CDS | 30.0% | |
AAACTTCTTAGGAACATACC+CGG | - | chr1.3:55647213-55647232 | None:intergenic | 35.0% | |
AAAGTGGAACGAGTAAGTTA+GGG | + | chr1.3:55647429-55647448 | MS.gene004974:CDS | 35.0% | |
ATATCAACCAAAGTCGTAAC+AGG | - | chr1.3:55647377-55647396 | None:intergenic | 35.0% | |
TCCAAAGAAATCGTCTTTGT+CGG | - | chr1.3:55646993-55647012 | None:intergenic | 35.0% | |
TGATATACCTATGGAAGAGA+GGG | + | chr1.3:55647097-55647116 | MS.gene004974:CDS | 35.0% | |
TGCAAGAGAATGAGGATAAT+GGG | + | chr1.3:55647297-55647316 | MS.gene004974:intron | 35.0% | |
TTCTCATTCTCATACCAAGA+AGG | - | chr1.3:55647257-55647276 | None:intergenic | 35.0% | |
! | GTAATGGAATTGCTTCTTCT+AGG | + | chr1.3:55647036-55647055 | MS.gene004974:CDS | 35.0% |
! | GTTACGACTTTGGTTGATAT+GGG | + | chr1.3:55647377-55647396 | MS.gene004974:intron | 35.0% |
! | TGTTACGACTTTGGTTGATA+TGG | + | chr1.3:55647376-55647395 | MS.gene004974:intron | 35.0% |
!!! | AAGAAGGGTTTTAAGGAAAG+TGG | + | chr1.3:55647413-55647432 | MS.gene004974:CDS | 35.0% |
AGTATAGGGAGTTTCCTTCT+TGG | + | chr1.3:55647240-55647259 | MS.gene004974:intron | 40.0% | |
ATTGCTTACAGAACAGATCG+CGG | + | chr1.3:55646678-55646697 | MS.gene004974:CDS | 40.0% | |
CGTTGTTCTCGTTACGTTAA+AGG | + | chr1.3:55646864-55646883 | MS.gene004974:CDS | 40.0% | |
CTGATATACCTATGGAAGAG+AGG | + | chr1.3:55647096-55647115 | MS.gene004974:CDS | 40.0% | |
GAAAGTGGAACGAGTAAGTT+AGG | + | chr1.3:55647428-55647447 | MS.gene004974:CDS | 40.0% | |
GCAAGAGAATGAGGATAATG+GGG | + | chr1.3:55647298-55647317 | MS.gene004974:intron | 40.0% | |
GGGAATGGTAATAGGAGTAA+TGG | + | chr1.3:55647020-55647039 | MS.gene004974:CDS | 40.0% | |
GTGCAAGAGAATGAGGATAA+TGG | + | chr1.3:55647296-55647315 | MS.gene004974:intron | 40.0% | |
TCCGACAAAGACGATTTCTT+TGG | + | chr1.3:55646989-55647008 | MS.gene004974:CDS | 40.0% | |
! | ACGATTTCTTTGGAGAGAAG+GGG | + | chr1.3:55646999-55647018 | MS.gene004974:CDS | 40.0% |
! | AGACGATTTCTTTGGAGAGA+AGG | + | chr1.3:55646997-55647016 | MS.gene004974:CDS | 40.0% |
! | GACGATTTCTTTGGAGAGAA+GGG | + | chr1.3:55646998-55647017 | MS.gene004974:CDS | 40.0% |
! | GCTTTGGACTGATATACCTA+TGG | + | chr1.3:55647088-55647107 | MS.gene004974:CDS | 40.0% |
AAAGCGAAGAACAACCGTGT+CGG | + | chr1.3:55646915-55646934 | MS.gene004974:CDS | 45.0% | |
AAGAGAGGGTTCATGTTCAG+GGG | + | chr1.3:55647111-55647130 | MS.gene004974:CDS | 45.0% | |
ACATGAACCCTCTCTTCCAT+AGG | - | chr1.3:55647107-55647126 | None:intergenic | 45.0% | |
AGAGAAGGGGGAATGGTAAT+AGG | + | chr1.3:55647012-55647031 | MS.gene004974:CDS | 45.0% | |
AGTGCGATGAATGTGACGTA+TGG | + | chr1.3:55646832-55646851 | MS.gene004974:CDS | 45.0% | |
GAACAATACCGAGGAAACTG+AGG | + | chr1.3:55646944-55646963 | MS.gene004974:CDS | 45.0% | |
GAAGAGAGGGTTCATGTTCA+GGG | + | chr1.3:55647110-55647129 | MS.gene004974:CDS | 45.0% | |
GTGCGATGAATGTGACGTAT+GGG | + | chr1.3:55646833-55646852 | MS.gene004974:CDS | 45.0% | |
TGAGTTGTTTGAGGGGAAGA+CGG | + | chr1.3:55647151-55647170 | MS.gene004974:CDS | 45.0% | |
! | CGATTTCTTTGGAGAGAAGG+GGG | + | chr1.3:55647000-55647019 | MS.gene004974:CDS | 45.0% |
! | CTTTGGTTGATATGGGATCG+AGG | + | chr1.3:55647384-55647403 | MS.gene004974:intron | 45.0% |
! | GCAGGGTAAGAAGGGTTTTA+AGG | + | chr1.3:55647406-55647425 | MS.gene004974:intron | 45.0% |
! | GCTTTTGTCGTTGTCGAAAG+AGG | + | chr1.3:55647328-55647347 | MS.gene004974:intron | 45.0% |
! | TAAGGGTGTGCAAGAGAATG+AGG | + | chr1.3:55647289-55647308 | MS.gene004974:intron | 45.0% |
!! | AGAATGAGGATAATGGGGCT+GGG | + | chr1.3:55647303-55647322 | MS.gene004974:intron | 45.0% |
!!! | AAGACGGTGTCGTCGATTTT+CGG | + | chr1.3:55647167-55647186 | MS.gene004974:CDS | 45.0% |
CCGCAGTTGTGGAAATGTAC+CGG | + | chr1.3:55647191-55647210 | MS.gene004974:CDS | 50.0% | |
CCGGTACATTTCCACAACTG+CGG | - | chr1.3:55647194-55647213 | None:intergenic | 50.0% | |
CGCAGTTGTGGAAATGTACC+GGG | + | chr1.3:55647192-55647211 | MS.gene004974:CDS | 50.0% | |
GAAGTCGCCTGTTACGACTT+TGG | + | chr1.3:55647367-55647386 | MS.gene004974:intron | 50.0% | |
GGAAGAGAGGGTTCATGTTC+AGG | + | chr1.3:55647109-55647128 | MS.gene004974:CDS | 50.0% | |
GGGATCCTGAGTTGTTTGAG+GGG | + | chr1.3:55647144-55647163 | MS.gene004974:CDS | 50.0% | |
GGGGATCCTGAGTTGTTTGA+GGG | + | chr1.3:55647143-55647162 | MS.gene004974:CDS | 50.0% | |
GTCTTCCCCTCAAACAACTC+AGG | - | chr1.3:55647152-55647171 | None:intergenic | 50.0% | |
GTTGATATGGGATCGAGGCA+GGG | + | chr1.3:55647389-55647408 | MS.gene004974:intron | 50.0% | |
TATTGTTCTCCGCTCCGACA+CGG | - | chr1.3:55646932-55646951 | None:intergenic | 50.0% | |
TGGGGATCCTGAGTTGTTTG+AGG | + | chr1.3:55647142-55647161 | MS.gene004974:CDS | 50.0% | |
TTTCGACGATGGCGAAGAGA+TGG | + | chr1.3:55646806-55646825 | MS.gene004974:CDS | 50.0% | |
! | TCTTTGGAGAGAAGGGGGAA+TGG | + | chr1.3:55647005-55647024 | MS.gene004974:CDS | 50.0% |
! | TGCGGTGTCAATTTCGACGA+TGG | + | chr1.3:55646795-55646814 | MS.gene004974:CDS | 50.0% |
!! | GAATGAGGATAATGGGGCTG+GGG | + | chr1.3:55647304-55647323 | MS.gene004974:intron | 50.0% |
!! | GAGAATGAGGATAATGGGGC+TGG | + | chr1.3:55647302-55647321 | MS.gene004974:intron | 50.0% |
AACAACTCAGGATCCCCACC+AGG | - | chr1.3:55647140-55647159 | None:intergenic | 55.0% | |
ACGAATGGGTCGACGGTTCA+TGG | + | chr1.3:55646757-55646776 | MS.gene004974:CDS | 55.0% | |
ATGGGTCGACGGTTCATGGA+CGG | + | chr1.3:55646761-55646780 | MS.gene004974:CDS | 55.0% | |
ATGTTCAGGGGATGCCTGGT+GGG | + | chr1.3:55647123-55647142 | MS.gene004974:CDS | 55.0% | |
CTGCGCAACCTCAGTTTCCT+CGG | - | chr1.3:55646955-55646974 | None:intergenic | 55.0% | |
GAAGAACAACCGTGTCGGAG+CGG | + | chr1.3:55646920-55646939 | MS.gene004974:CDS | 55.0% | |
GCTTACAGAACAGATCGCGG+CGG | + | chr1.3:55646681-55646700 | MS.gene004974:CDS | 55.0% | |
GGATCGAGGCAGGGTAAGAA+GGG | + | chr1.3:55647398-55647417 | MS.gene004974:intron | 55.0% | |
GTTCATGTTCAGGGGATGCC+TGG | + | chr1.3:55647119-55647138 | MS.gene004974:CDS | 55.0% | |
! | CGATTTTCGGACCGCAGTTG+TGG | + | chr1.3:55647180-55647199 | MS.gene004974:CDS | 55.0% |
! | GGTTGATATGGGATCGAGGC+AGG | + | chr1.3:55647388-55647407 | MS.gene004974:intron | 55.0% |
!! | GCGGTGGTGGGAGAATGAAA+GGG | + | chr1.3:55646703-55646722 | MS.gene004974:CDS | 55.0% |
!! | TGGACGGTGGACTGTATCTG+CGG | + | chr1.3:55646777-55646796 | MS.gene004974:CDS | 55.0% |
CATGTTCAGGGGATGCCTGG+TGG | + | chr1.3:55647122-55647141 | MS.gene004974:CDS | 60.0% | |
CGCGGAGGCCGTTTAAGCTT+TGG | + | chr1.3:55647072-55647091 | MS.gene004974:CDS | 60.0% | |
CGGAGCGGAGAACAATACCG+AGG | + | chr1.3:55646935-55646954 | MS.gene004974:CDS | 60.0% | |
CTAGGGTTGCGTCGTGTTCG+CGG | + | chr1.3:55647054-55647073 | MS.gene004974:CDS | 60.0% | |
GAACCGTCGACCCATTCGTC+CGG | - | chr1.3:55646756-55646775 | None:intergenic | 60.0% | |
GGATCCACCACCGGACGAAT+GGG | + | chr1.3:55646743-55646762 | MS.gene004974:CDS | 60.0% | |
GGGATCGAGGCAGGGTAAGA+AGG | + | chr1.3:55647397-55647416 | MS.gene004974:intron | 60.0% | |
TACAGAACAGATCGCGGCGG+CGG | + | chr1.3:55646684-55646703 | MS.gene004974:CDS | 60.0% | |
TGGATCCACCACCGGACGAA+TGG | + | chr1.3:55646742-55646761 | MS.gene004974:CDS | 60.0% | |
TGTTCAGGGGATGCCTGGTG+GGG | + | chr1.3:55647124-55647143 | MS.gene004974:CDS | 60.0% | |
!! | GGCGGTGGTGGGAGAATGAA+AGG | + | chr1.3:55646702-55646721 | MS.gene004974:CDS | 60.0% |
!! | TCGTCCGGTGGTGGATCCAT+CGG | - | chr1.3:55646741-55646760 | None:intergenic | 60.0% |
AGGGCGATCGAATCGCCCGA+TGG | + | chr1.3:55646722-55646741 | MS.gene004974:CDS | 65.0% | |
CCACCGGACGAATGGGTCGA+CGG | + | chr1.3:55646750-55646769 | MS.gene004974:CDS | 65.0% | |
GGTCGACGGTTCATGGACGG+TGG | + | chr1.3:55646764-55646783 | MS.gene004974:CDS | 65.0% | |
TCGACCCATTCGTCCGGTGG+TGG | - | chr1.3:55646750-55646769 | None:intergenic | 65.0% | |
TCGCCCGATGGATCCACCAC+CGG | + | chr1.3:55646734-55646753 | MS.gene004974:CDS | 65.0% | |
!! | CGTCCGGTGGTGGATCCATC+GGG | - | chr1.3:55646740-55646759 | None:intergenic | 65.0% |
AGAACAGATCGCGGCGGCGG+TGG | + | chr1.3:55646687-55646706 | MS.gene004974:CDS | 70.0% | |
CCGTCGACCCATTCGTCCGG+TGG | - | chr1.3:55646753-55646772 | None:intergenic | 70.0% | |
GGGTTGCGTCGTGTTCGCGG+AGG | + | chr1.3:55647057-55647076 | MS.gene004974:CDS | 70.0% | |
ACAGATCGCGGCGGCGGTGG+TGG | + | chr1.3:55646690-55646709 | MS.gene004974:CDS | 75.0% | |
CAGATCGCGGCGGCGGTGGT+GGG | + | chr1.3:55646691-55646710 | MS.gene004974:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 55646666 | 55647449 | 55646666 | ID=MS.gene004974 |
chr1.3 | mRNA | 55646666 | 55647449 | 55646666 | ID=MS.gene004974.t1;Parent=MS.gene004974 |
chr1.3 | exon | 55646666 | 55647213 | 55646666 | ID=MS.gene004974.t1.exon1;Parent=MS.gene004974.t1 |
chr1.3 | CDS | 55646666 | 55647213 | 55646666 | ID=cds.MS.gene004974.t1;Parent=MS.gene004974.t1 |
chr1.3 | exon | 55647410 | 55647449 | 55647410 | ID=MS.gene004974.t1.exon2;Parent=MS.gene004974.t1 |
chr1.3 | CDS | 55647410 | 55647449 | 55647410 | ID=cds.MS.gene004974.t1;Parent=MS.gene004974.t1 |
Gene Sequence |
Protein sequence |