Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005168.t1 | KEH43046.1 | 83.9 | 1129 | 154 | 5 | 1 | 1114 | 1 | 1116 | 0.00E+00 | 1853.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005168.t1 | F4K493 | 44.4 | 1283 | 516 | 24 | 4 | 1113 | 2 | 1260 | 1.3e-274 | 947.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005168.t1 | A0A072VN36 | 83.9 | 1129 | 154 | 5 | 1 | 1114 | 1 | 1116 | 0.0e+00 | 1853.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene005168.t1 | TR | SNF2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005168.t1 | MTR_1g081750 | 85.208 | 1129 | 139 | 6 | 1 | 1114 | 1 | 1116 | 0.0 | 1962 |
MS.gene005168.t1 | MTR_7g026650 | 66.088 | 1153 | 320 | 17 | 21 | 1113 | 11 | 1152 | 0.0 | 1469 |
MS.gene005168.t1 | MTR_3g071860 | 71.262 | 856 | 209 | 11 | 292 | 1113 | 414 | 1266 | 0.0 | 1185 |
MS.gene005168.t1 | MTR_3g071860 | 65.287 | 314 | 95 | 4 | 1 | 300 | 1 | 314 | 1.83e-122 | 407 |
MS.gene005168.t1 | MTR_5g083300 | 58.899 | 854 | 307 | 18 | 297 | 1113 | 457 | 1303 | 0.0 | 940 |
MS.gene005168.t1 | MTR_5g083300 | 43.438 | 320 | 143 | 8 | 5 | 299 | 4 | 310 | 8.22e-59 | 222 |
MS.gene005168.t1 | MTR_5g083300 | 58.899 | 854 | 307 | 18 | 297 | 1113 | 494 | 1340 | 0.0 | 939 |
MS.gene005168.t1 | MTR_5g083300 | 43.438 | 320 | 143 | 8 | 5 | 299 | 41 | 347 | 9.14e-59 | 222 |
MS.gene005168.t1 | MTR_7g026620 | 49.123 | 741 | 211 | 18 | 296 | 1017 | 51 | 644 | 0.0 | 596 |
MS.gene005168.t1 | MTR_7g029525 | 33.559 | 739 | 434 | 17 | 380 | 1094 | 597 | 1302 | 5.58e-110 | 374 |
MS.gene005168.t1 | MTR_7g450820 | 35.229 | 721 | 381 | 19 | 416 | 1094 | 537 | 1213 | 6.73e-108 | 366 |
MS.gene005168.t1 | MTR_7g450860 | 33.655 | 725 | 400 | 17 | 416 | 1100 | 574 | 1257 | 9.58e-107 | 363 |
MS.gene005168.t1 | MTR_7g450790 | 34.440 | 723 | 401 | 19 | 416 | 1104 | 744 | 1427 | 7.10e-105 | 360 |
MS.gene005168.t1 | MTR_7g050445 | 34.590 | 743 | 390 | 22 | 416 | 1109 | 598 | 1293 | 3.59e-104 | 357 |
MS.gene005168.t1 | MTR_4g088650 | 33.659 | 716 | 391 | 19 | 416 | 1104 | 548 | 1206 | 1.51e-99 | 342 |
MS.gene005168.t1 | MTR_7g450780 | 30.991 | 797 | 448 | 22 | 361 | 1100 | 579 | 1330 | 2.81e-91 | 320 |
MS.gene005168.t1 | MTR_2g437480 | 31.205 | 689 | 378 | 18 | 402 | 1069 | 388 | 1001 | 2.03e-86 | 302 |
MS.gene005168.t1 | MTR_8g037345 | 30.714 | 700 | 381 | 20 | 394 | 1069 | 233 | 852 | 9.07e-84 | 293 |
MS.gene005168.t1 | MTR_7g026550 | 34.589 | 584 | 160 | 19 | 414 | 994 | 3 | 367 | 4.81e-71 | 242 |
MS.gene005168.t1 | MTR_1g080420 | 25.993 | 604 | 353 | 18 | 536 | 1074 | 576 | 1150 | 6.31e-42 | 168 |
MS.gene005168.t1 | MTR_1g080420 | 25.993 | 604 | 353 | 18 | 536 | 1074 | 707 | 1281 | 8.29e-42 | 167 |
MS.gene005168.t1 | MTR_3g071660 | 41.573 | 178 | 52 | 3 | 695 | 871 | 1 | 127 | 3.68e-31 | 119 |
MS.gene005168.t1 | MTR_8g094070 | 25.260 | 578 | 317 | 22 | 530 | 1061 | 373 | 881 | 8.33e-29 | 125 |
MS.gene005168.t1 | MTR_8g094070 | 25.260 | 578 | 317 | 22 | 530 | 1061 | 373 | 881 | 1.05e-28 | 125 |
MS.gene005168.t1 | MTR_5g004720 | 23.697 | 633 | 366 | 23 | 505 | 1099 | 163 | 716 | 1.30e-28 | 124 |
MS.gene005168.t1 | MTR_5g020000 | 23.971 | 559 | 326 | 18 | 577 | 1112 | 206 | 688 | 9.75e-22 | 102 |
MS.gene005168.t1 | MTR_3g084600 | 45.082 | 122 | 35 | 2 | 454 | 575 | 15 | 104 | 1.40e-20 | 90.9 |
MS.gene005168.t1 | MTR_2g084695 | 31.163 | 215 | 109 | 6 | 818 | 1032 | 65 | 240 | 3.22e-19 | 89.7 |
MS.gene005168.t1 | MTR_3g106210 | 24.850 | 499 | 288 | 17 | 576 | 1052 | 309 | 742 | 4.60e-18 | 90.9 |
MS.gene005168.t1 | MTR_3g106210 | 24.850 | 499 | 288 | 17 | 576 | 1052 | 309 | 742 | 4.64e-18 | 90.9 |
MS.gene005168.t1 | MTR_3g106210 | 24.850 | 499 | 288 | 17 | 576 | 1052 | 309 | 742 | 7.45e-18 | 90.1 |
MS.gene005168.t1 | MTR_3g106210 | 24.850 | 499 | 288 | 17 | 576 | 1052 | 309 | 742 | 8.60e-18 | 89.7 |
MS.gene005168.t1 | MTR_3g071670 | 48.000 | 100 | 16 | 2 | 778 | 877 | 2 | 65 | 2.72e-16 | 74.7 |
MS.gene005168.t1 | MTR_1g013190 | 26.966 | 356 | 204 | 11 | 706 | 1052 | 432 | 740 | 1.56e-15 | 82.4 |
MS.gene005168.t1 | MTR_4g032945 | 66.667 | 48 | 16 | 0 | 100 | 147 | 1 | 48 | 2.23e-15 | 72.4 |
MS.gene005168.t1 | MTR_7g026610 | 62.712 | 59 | 20 | 1 | 198 | 254 | 13 | 71 | 2.80e-15 | 72.4 |
MS.gene005168.t1 | MTR_5g005840 | 23.346 | 544 | 320 | 19 | 577 | 1101 | 385 | 850 | 1.15e-14 | 79.7 |
MS.gene005168.t1 | MTR_3g053910 | 24.131 | 518 | 292 | 20 | 569 | 1061 | 616 | 1057 | 1.74e-14 | 79.3 |
MS.gene005168.t1 | MTR_3g053910 | 24.131 | 518 | 292 | 20 | 569 | 1061 | 587 | 1028 | 1.92e-14 | 79.0 |
MS.gene005168.t1 | MTR_5g090090 | 22.754 | 501 | 302 | 15 | 576 | 1058 | 638 | 1071 | 2.12e-14 | 79.0 |
MS.gene005168.t1 | MTR_5g090090 | 23.031 | 508 | 304 | 17 | 569 | 1058 | 633 | 1071 | 2.56e-14 | 78.6 |
MS.gene005168.t1 | MTR_4g078495 | 31.138 | 167 | 102 | 4 | 924 | 1083 | 530 | 690 | 4.95e-14 | 77.4 |
MS.gene005168.t1 | MTR_4g078460 | 31.138 | 167 | 102 | 4 | 924 | 1083 | 816 | 976 | 6.66e-14 | 77.0 |
MS.gene005168.t1 | MTR_7g026590 | 50.000 | 78 | 36 | 2 | 351 | 426 | 23 | 99 | 1.02e-13 | 68.9 |
MS.gene005168.t1 | MTR_4g118845 | 22.612 | 513 | 297 | 19 | 577 | 1071 | 210 | 640 | 1.25e-13 | 76.3 |
MS.gene005168.t1 | MTR_4g118845 | 22.612 | 513 | 297 | 19 | 577 | 1071 | 23 | 453 | 1.58e-13 | 75.9 |
MS.gene005168.t1 | MTR_2g020000 | 22.638 | 508 | 303 | 17 | 577 | 1071 | 213 | 643 | 4.99e-13 | 74.3 |
MS.gene005168.t1 | MTR_7g090960 | 29.545 | 176 | 116 | 5 | 896 | 1070 | 1173 | 1341 | 8.68e-12 | 70.5 |
MS.gene005168.t1 | MTR_7g090960 | 29.545 | 176 | 116 | 5 | 896 | 1070 | 1092 | 1260 | 9.24e-12 | 70.1 |
MS.gene005168.t1 | MTR_7g089190 | 39.362 | 94 | 56 | 1 | 960 | 1052 | 690 | 783 | 4.89e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005168.t1 | AT3G42670 | 56.733 | 802 | 292 | 13 | 352 | 1114 | 472 | 1257 | 0.0 | 878 |
MS.gene005168.t1 | AT3G42670 | 36.333 | 300 | 162 | 8 | 4 | 290 | 2 | 285 | 2.37e-44 | 176 |
MS.gene005168.t1 | AT3G42670 | 56.733 | 802 | 290 | 13 | 352 | 1114 | 472 | 1255 | 0.0 | 878 |
MS.gene005168.t1 | AT3G42670 | 36.333 | 300 | 162 | 8 | 4 | 290 | 2 | 285 | 2.31e-44 | 176 |
MS.gene005168.t1 | AT3G42670 | 56.733 | 802 | 290 | 13 | 352 | 1114 | 472 | 1255 | 0.0 | 878 |
MS.gene005168.t1 | AT3G42670 | 36.333 | 300 | 162 | 8 | 4 | 290 | 2 | 285 | 2.31e-44 | 176 |
MS.gene005168.t1 | AT3G42670 | 56.733 | 802 | 290 | 13 | 352 | 1114 | 472 | 1255 | 0.0 | 878 |
MS.gene005168.t1 | AT3G42670 | 36.333 | 300 | 162 | 8 | 4 | 290 | 2 | 285 | 2.31e-44 | 176 |
MS.gene005168.t1 | AT5G20420 | 54.933 | 821 | 325 | 11 | 331 | 1114 | 449 | 1261 | 0.0 | 864 |
MS.gene005168.t1 | AT5G20420 | 35.443 | 316 | 156 | 8 | 4 | 294 | 2 | 294 | 1.20e-45 | 180 |
MS.gene005168.t1 | AT1G05490 | 32.271 | 722 | 418 | 19 | 416 | 1098 | 695 | 1384 | 5.96e-99 | 343 |
MS.gene005168.t1 | AT3G24340 | 31.983 | 716 | 419 | 18 | 405 | 1102 | 449 | 1114 | 1.67e-95 | 330 |
MS.gene005168.t1 | AT2G16390 | 31.339 | 702 | 379 | 20 | 394 | 1069 | 226 | 850 | 4.36e-82 | 287 |
MS.gene005168.t1 | AT2G16390 | 31.339 | 702 | 379 | 20 | 394 | 1069 | 223 | 847 | 5.14e-82 | 287 |
MS.gene005168.t1 | AT2G21450 | 31.595 | 652 | 352 | 21 | 451 | 1069 | 92 | 682 | 9.81e-79 | 274 |
MS.gene005168.t1 | AT2G21450 | 31.288 | 652 | 354 | 20 | 451 | 1069 | 183 | 773 | 2.75e-78 | 275 |
MS.gene005168.t1 | AT2G21450 | 31.288 | 652 | 354 | 20 | 451 | 1069 | 190 | 780 | 3.70e-78 | 275 |
MS.gene005168.t1 | AT3G19210 | 23.469 | 588 | 351 | 19 | 542 | 1093 | 180 | 704 | 4.05e-27 | 119 |
MS.gene005168.t1 | AT3G19210 | 23.898 | 590 | 348 | 20 | 542 | 1093 | 180 | 706 | 4.78e-27 | 119 |
MS.gene005168.t1 | AT3G19210 | 23.898 | 590 | 348 | 20 | 542 | 1093 | 180 | 706 | 9.94e-27 | 118 |
MS.gene005168.t1 | AT5G63950 | 24.162 | 567 | 315 | 24 | 532 | 1061 | 367 | 855 | 1.53e-23 | 108 |
MS.gene005168.t1 | AT5G63950 | 24.386 | 570 | 327 | 24 | 532 | 1061 | 367 | 872 | 1.55e-23 | 108 |
MS.gene005168.t1 | AT1G08600 | 27.164 | 335 | 179 | 12 | 542 | 858 | 719 | 1006 | 6.82e-23 | 106 |
MS.gene005168.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 921 | 1074 | 1123 | 1282 | 9.50e-18 | 89.7 |
MS.gene005168.t1 | AT1G08600 | 27.164 | 335 | 179 | 12 | 542 | 858 | 719 | 1006 | 6.82e-23 | 106 |
MS.gene005168.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 921 | 1074 | 1123 | 1282 | 9.50e-18 | 89.7 |
MS.gene005168.t1 | AT1G08600 | 27.164 | 335 | 179 | 12 | 542 | 858 | 719 | 1006 | 6.82e-23 | 106 |
MS.gene005168.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 921 | 1074 | 1123 | 1282 | 9.50e-18 | 89.7 |
MS.gene005168.t1 | AT4G31900 | 23.377 | 539 | 299 | 18 | 532 | 1052 | 214 | 656 | 2.44e-18 | 91.7 |
MS.gene005168.t1 | AT4G31900 | 23.377 | 539 | 299 | 18 | 532 | 1052 | 214 | 656 | 2.80e-18 | 91.7 |
MS.gene005168.t1 | AT4G31900 | 23.377 | 539 | 299 | 18 | 532 | 1052 | 173 | 615 | 3.13e-18 | 91.3 |
MS.gene005168.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 921 | 1074 | 1102 | 1261 | 1.09e-17 | 89.7 |
MS.gene005168.t1 | AT1G03750 | 30.682 | 176 | 108 | 5 | 916 | 1083 | 528 | 697 | 5.15e-15 | 80.5 |
MS.gene005168.t1 | AT2G13370 | 22.817 | 504 | 302 | 15 | 576 | 1061 | 646 | 1080 | 1.17e-14 | 79.7 |
MS.gene005168.t1 | AT2G13370 | 22.817 | 504 | 302 | 15 | 576 | 1061 | 646 | 1080 | 1.17e-14 | 79.7 |
MS.gene005168.t1 | AT2G13370 | 22.817 | 504 | 302 | 15 | 576 | 1061 | 646 | 1080 | 1.17e-14 | 79.7 |
MS.gene005168.t1 | AT3G57300 | 30.114 | 176 | 115 | 5 | 896 | 1070 | 1187 | 1355 | 9.08e-13 | 73.6 |
MS.gene005168.t1 | AT3G57300 | 30.114 | 176 | 115 | 5 | 896 | 1070 | 1187 | 1355 | 9.08e-13 | 73.6 |
MS.gene005168.t1 | AT3G57300 | 30.114 | 176 | 115 | 5 | 896 | 1070 | 1220 | 1388 | 1.20e-12 | 73.2 |
MS.gene005168.t1 | AT5G18620 | 23.262 | 374 | 233 | 11 | 706 | 1071 | 319 | 646 | 4.23e-12 | 71.2 |
MS.gene005168.t1 | AT5G18620 | 23.262 | 374 | 233 | 11 | 706 | 1071 | 319 | 646 | 4.60e-12 | 71.2 |
MS.gene005168.t1 | AT3G06400 | 23.098 | 368 | 241 | 9 | 706 | 1071 | 314 | 641 | 8.51e-12 | 70.5 |
MS.gene005168.t1 | AT3G06400 | 23.098 | 368 | 241 | 9 | 706 | 1071 | 314 | 641 | 8.66e-12 | 70.1 |
MS.gene005168.t1 | AT3G06400 | 23.529 | 374 | 232 | 10 | 706 | 1071 | 314 | 641 | 9.18e-12 | 70.1 |
MS.gene005168.t1 | AT2G18760 | 31.387 | 137 | 88 | 3 | 933 | 1069 | 745 | 875 | 9.25e-12 | 70.1 |
MS.gene005168.t1 | AT2G18760 | 31.387 | 137 | 88 | 3 | 933 | 1069 | 745 | 875 | 9.25e-12 | 70.1 |
MS.gene005168.t1 | AT2G18760 | 31.387 | 137 | 88 | 3 | 933 | 1069 | 745 | 875 | 9.25e-12 | 70.1 |
MS.gene005168.t1 | AT2G18760 | 31.387 | 137 | 88 | 3 | 933 | 1069 | 745 | 875 | 9.25e-12 | 70.1 |
MS.gene005168.t1 | AT2G18760 | 31.387 | 137 | 88 | 3 | 933 | 1069 | 745 | 875 | 9.25e-12 | 70.1 |
MS.gene005168.t1 | AT2G18760 | 31.387 | 137 | 88 | 3 | 933 | 1069 | 745 | 875 | 9.25e-12 | 70.1 |
MS.gene005168.t1 | AT2G18760 | 31.387 | 137 | 88 | 3 | 933 | 1069 | 804 | 934 | 1.03e-11 | 70.1 |
MS.gene005168.t1 | AT5G66750 | 29.940 | 167 | 112 | 2 | 933 | 1099 | 542 | 703 | 2.90e-11 | 68.2 |
MS.gene005168.t1 | AT2G44980 | 23.810 | 378 | 244 | 10 | 707 | 1075 | 181 | 523 | 2.92e-11 | 68.6 |
Find 166 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTTGTTTCAAAACAATTT+TGG | 0.098097 | 1.1:+60578017 | MS.gene005168:CDS |
TAAGAGAAGGTGGTTGTTTA+AGG | 0.177258 | 1.1:+60576110 | MS.gene005168:CDS |
CCAGGCAGAACCATTGATTT+TGG | 0.203037 | 1.1:-60577711 | None:intergenic |
AGAACTTCGTGAATAAATTT+TGG | 0.216798 | 1.1:-60578071 | None:intergenic |
TGCTTGACACCATTAGAATT+TGG | 0.218550 | 1.1:-60577738 | None:intergenic |
AACTTTGATGTGGTACTTCT+AGG | 0.221583 | 1.1:-60577942 | None:intergenic |
CTTATCTTCTGTTCTCATTA+AGG | 0.232667 | 1.1:-60577841 | None:intergenic |
TATCGATTGGATGAACAAAT+TGG | 0.242680 | 1.1:+60576853 | MS.gene005168:CDS |
ATATGGATTTGATAGCTTTA+TGG | 0.245952 | 1.1:+60576136 | MS.gene005168:CDS |
AGACCTCCAATTTCGCTTCT+TGG | 0.261495 | 1.1:-60575967 | None:intergenic |
TCGACCTGGTCAAGAGAAAA+TGG | 0.262902 | 1.1:+60578895 | MS.gene005168:CDS |
ACATCAAGTTATCTTCTTGA+TGG | 0.278990 | 1.1:+60576438 | MS.gene005168:CDS |
TCACTGATAGTTGGATCTTC+TGG | 0.280474 | 1.1:-60576309 | None:intergenic |
AGTTATTTCGTTGAAGTCTT+TGG | 0.292757 | 1.1:-60575633 | None:intergenic |
GGTAGGTGACAAGGCTAAAA+TGG | 0.298106 | 1.1:+60577223 | MS.gene005168:intron |
TAATGGTGTCAAGCATGATT+TGG | 0.304673 | 1.1:+60577746 | MS.gene005168:CDS |
TATGGATTTGATAGCTTTAT+GGG | 0.316460 | 1.1:+60576137 | MS.gene005168:CDS |
CCAATGCCAAGAAGCGAAAT+TGG | 0.318140 | 1.1:+60575961 | MS.gene005168:CDS |
CCAAAGAAAATGATAGTGTT+TGG | 0.318198 | 1.1:+60577349 | MS.gene005168:CDS |
TTGAAGTTCAAAACATTCAT+AGG | 0.322383 | 1.1:-60575886 | None:intergenic |
CAAGCTTGTGCATCAAGTTA+TGG | 0.328101 | 1.1:+60575840 | MS.gene005168:CDS |
AACAAATTTGCTTTGAGAAA+AGG | 0.336871 | 1.1:+60578524 | MS.gene005168:CDS |
TTGGTGTCGTTGAATGTATC+TGG | 0.339974 | 1.1:-60577692 | None:intergenic |
AGTTCTTCTGATACTCTTCC+TGG | 0.348560 | 1.1:+60578290 | MS.gene005168:CDS |
AAAGTTGAGGAAGTGCTTAA+TGG | 0.350370 | 1.1:+60577959 | MS.gene005168:CDS |
GCAGAAACTGCAAAAGAAAA+TGG | 0.357505 | 1.1:+60578367 | MS.gene005168:CDS |
GCTCTTCATTGCCACAATCT+AGG | 0.360216 | 1.1:+60575725 | MS.gene005168:CDS |
CCAATTTCGCTTCTTGGCAT+TGG | 0.361638 | 1.1:-60575961 | None:intergenic |
AAAATTTATTCACGAAGTTC+TGG | 0.379765 | 1.1:+60578073 | MS.gene005168:CDS |
TTCATAGGACTACTAATATT+AGG | 0.382189 | 1.1:-60575871 | None:intergenic |
GTGGTTGTTTAAGGAGCATA+TGG | 0.383291 | 1.1:+60576119 | MS.gene005168:CDS |
TGTCTTTCTTCACTGATAGT+TGG | 0.384151 | 1.1:-60576318 | None:intergenic |
ATATGTCAATTCCAGGTCTT+AGG | 0.387141 | 1.1:-60575267 | None:intergenic |
AAGCTTGTGCATCAAGTTAT+GGG | 0.390339 | 1.1:+60575841 | MS.gene005168:CDS |
AGGTGGTGATAATGTTTCTT+CGG | 0.390951 | 1.1:+60576056 | MS.gene005168:CDS |
CATGTGTAGAGTGTGGTCTT+TGG | 0.395080 | 1.1:-60577606 | None:intergenic |
GCTCAAAACAAATCTTACTT+TGG | 0.400942 | 1.1:-60578549 | None:intergenic |
GGTGGTGATAATGTTTCTTC+GGG | 0.402375 | 1.1:+60576057 | MS.gene005168:CDS |
AATTCCAGGTCTTAGGAAAC+TGG | 0.403179 | 1.1:-60575260 | None:intergenic |
CCTGGAGTTCCAAATTCTAA+TGG | 0.403216 | 1.1:+60577729 | MS.gene005168:CDS |
AAGAAAATGGCGGGCTGTAC+CGG | 0.405933 | 1.1:+60578380 | MS.gene005168:CDS |
CAAAGAAAATGATAGTGTTT+GGG | 0.407919 | 1.1:+60577350 | MS.gene005168:CDS |
GGTAGAAAATCCTGATGATT+TGG | 0.409165 | 1.1:+60576383 | MS.gene005168:CDS |
GTCTTTGGAGCTAGGACTAA+TGG | 0.409580 | 1.1:-60577591 | None:intergenic |
AAAGAGATTCTGCAACTAAC+TGG | 0.420585 | 1.1:+60578683 | MS.gene005168:CDS |
CTCAACCTCAAGAGAGTAAC+CGG | 0.423138 | 1.1:-60578399 | None:intergenic |
ATCATGTTCACATGTTTCCT+TGG | 0.426716 | 1.1:-60576830 | None:intergenic |
CACCCTAGTGTTCTTGTCAT+GGG | 0.427375 | 1.1:+60577801 | MS.gene005168:CDS |
TCAACTGATGCTACTGATCT+TGG | 0.430086 | 1.1:+60577315 | MS.gene005168:CDS |
ACGCGCGAGAAAATTCTTCT+TGG | 0.431056 | 1.1:+60578160 | MS.gene005168:CDS |
AAGGAAGAGGATAATGTGAT+TGG | 0.437162 | 1.1:+60575589 | MS.gene005168:CDS |
TACGTAATGTTCAAGTTGTA+TGG | 0.439233 | 1.1:-60576010 | None:intergenic |
AAGAAAAGAGATGATGAGAA+AGG | 0.450749 | 1.1:-60577535 | None:intergenic |
ACACCCTAGTGTTCTTGTCA+TGG | 0.450907 | 1.1:+60577800 | MS.gene005168:CDS |
TCTATATTTATCTTCCTCCA+TGG | 0.451446 | 1.1:-60578948 | None:intergenic |
TTGAACTTCAAATCAGAAAA+CGG | 0.451497 | 1.1:+60575898 | MS.gene005168:CDS |
CTGATGATTTGGCTGGCATA+TGG | 0.454793 | 1.1:+60576394 | MS.gene005168:CDS |
AGCACAGATATGTCAATTCC+AGG | 0.458031 | 1.1:-60575274 | None:intergenic |
ATATCTCATGCTCCTGGAGC+TGG | 0.462480 | 1.1:+60577507 | MS.gene005168:CDS |
TACTATGAGTTTGTTGTGCA+TGG | 0.462547 | 1.1:-60575183 | None:intergenic |
TCAATCAATGCTTGTTCTGA+AGG | 0.465693 | 1.1:+60578785 | MS.gene005168:CDS |
TATCGATGATCATGAAGAAC+AGG | 0.466478 | 1.1:+60576206 | MS.gene005168:CDS |
GCATTTGAAGCAGTATTGAA+TGG | 0.467351 | 1.1:+60575100 | MS.gene005168:intron |
AGTAAAATTCTCAATGCTGC+TGG | 0.475556 | 1.1:-60577987 | None:intergenic |
GTATATCACTTGTTGATGAC+TGG | 0.488667 | 1.1:+60578923 | MS.gene005168:CDS |
AGAGTGTGGTCTTTGGAGCT+AGG | 0.489103 | 1.1:-60577599 | None:intergenic |
CACAATCTCGTGTTGTTCAT+CGG | 0.491623 | 1.1:-60578345 | None:intergenic |
CCATTAGAATTTGGAACTCC+AGG | 0.495262 | 1.1:-60577729 | None:intergenic |
TACCGCGTCATCTTTAAAGA+AGG | 0.495527 | 1.1:+60575789 | MS.gene005168:CDS |
CATATGCCAGCCAAATCATC+AGG | 0.497067 | 1.1:-60576393 | None:intergenic |
ACGTGTGATGAGCAAGGAAA+AGG | 0.497284 | 1.1:+60578580 | MS.gene005168:CDS |
AATCTTCTCAGCTTGCCATT+CGG | 0.505551 | 1.1:-60579035 | None:intergenic |
TATTTCGTTGAAGTCTTTGG+AGG | 0.508106 | 1.1:-60575630 | None:intergenic |
AGATTGTAATGATGAAAAGT+TGG | 0.511319 | 1.1:+60576032 | MS.gene005168:CDS |
GTAATTTGTCATCAGACATC+CGG | 0.513031 | 1.1:+60575203 | MS.gene005168:CDS |
GCGCATGGCTAAAGCATTGA+GGG | 0.513248 | 1.1:+60577881 | MS.gene005168:CDS |
TGCTCCAGTTTCCTAAGACC+TGG | 0.515668 | 1.1:+60575256 | MS.gene005168:CDS |
CATGAAATCGACATGAACAT+TGG | 0.516088 | 1.1:-60575516 | None:intergenic |
CTTGTTGATGACTGGATCCA+TGG | 0.517661 | 1.1:+60578931 | MS.gene005168:CDS |
GAAGAACTACTTGGAAAGAG+TGG | 0.517977 | 1.1:+60578969 | MS.gene005168:CDS |
AAGCAGTATTGAATGGCTCA+TGG | 0.520661 | 1.1:+60575107 | MS.gene005168:CDS |
GAAACAATGCAGTGAAGATA+CGG | 0.522442 | 1.1:+60577257 | MS.gene005168:CDS |
CCAAAATCAATGGTTCTGCC+TGG | 0.525654 | 1.1:+60577711 | MS.gene005168:CDS |
TGTGTTATATCTCATGCTCC+TGG | 0.525908 | 1.1:+60577501 | MS.gene005168:CDS |
TTATCTTCTTGATGGAAATG+AGG | 0.528274 | 1.1:+60576446 | MS.gene005168:CDS |
TGGATAAGATACACCGGCAC+GGG | 0.534854 | 1.1:-60577657 | None:intergenic |
GGTTGCATTTGTCATAAGAT+CGG | 0.534985 | 1.1:+60575810 | MS.gene005168:CDS |
TGAAGAAAGACAGTTTGAGC+AGG | 0.538289 | 1.1:+60576329 | MS.gene005168:CDS |
TATGATGATCAAGGTTCACT+TGG | 0.538490 | 1.1:+60575547 | MS.gene005168:CDS |
TTCAACGACACCAAAATCAA+TGG | 0.539455 | 1.1:+60577701 | MS.gene005168:CDS |
CTGTACCGGTTACTCTCTTG+AGG | 0.542553 | 1.1:+60578394 | MS.gene005168:CDS |
TGATGATTTGGCTGGCATAT+GGG | 0.542896 | 1.1:+60576395 | MS.gene005168:CDS |
TTCTCAGCTTGCCATTCGGA+AGG | 0.544538 | 1.1:-60579031 | None:intergenic |
TTGTGCATGGAGGAAATGTA+TGG | 0.544715 | 1.1:-60575170 | None:intergenic |
GAAAATCCTGATGATTTGGC+TGG | 0.557990 | 1.1:+60576387 | MS.gene005168:CDS |
GTCTAGAAAAGATCAAAAGC+TGG | 0.560297 | 1.1:+60577772 | MS.gene005168:CDS |
TTACGATAATTAGCATCGAA+TGG | 0.560548 | 1.1:-60574609 | None:intergenic |
ATAAATATAGAAGAACTACT+TGG | 0.563098 | 1.1:+60578960 | MS.gene005168:CDS |
AGATTGAAGATGAAATACTC+AGG | 0.564407 | 1.1:+60579053 | MS.gene005168:CDS |
TGACACAAATAAAGAATCCA+AGG | 0.564564 | 1.1:+60576813 | MS.gene005168:CDS |
AATGTATAGATTTGCAAACC+AGG | 0.566512 | 1.1:-60578308 | None:intergenic |
AAGAACTACTTGGAAAGAGT+GGG | 0.567137 | 1.1:+60578970 | MS.gene005168:CDS |
GCGCGTGCCTCTAGTAAATG+AGG | 0.568077 | 1.1:-60578143 | None:intergenic |
CGTATCGGAAAGCGGTGATG+AGG | 0.568686 | 1.1:+60576362 | MS.gene005168:CDS |
TCATCAAGTATCAAGAGTCC+AGG | 0.569191 | 1.1:-60577909 | None:intergenic |
TAACCCATGACAAGAACACT+AGG | 0.569323 | 1.1:-60577804 | None:intergenic |
AGCGCATGGCTAAAGCATTG+AGG | 0.574680 | 1.1:+60577880 | MS.gene005168:CDS |
TGCTCATCACACGTGAGATT+AGG | 0.575173 | 1.1:-60578571 | None:intergenic |
GGAAGTAATCGATGCTTACA+TGG | 0.577289 | 1.1:+60576269 | MS.gene005168:CDS |
GAACATTGGTTATATTTGTG+AGG | 0.579746 | 1.1:-60575502 | None:intergenic |
AAACTGCAAAAGAAAATGGC+GGG | 0.587027 | 1.1:+60578371 | MS.gene005168:CDS |
GTATCTGGCTTCGACAGCTG+TGG | 0.588022 | 1.1:-60577677 | None:intergenic |
ATATCCAATGGTAGGTGACA+AGG | 0.588447 | 1.1:+60577214 | MS.gene005168:intron |
AGCAGTATTGAATGGCTCAT+GGG | 0.590169 | 1.1:+60575108 | MS.gene005168:CDS |
AAAGCATTGAGGGAAAGTCC+TGG | 0.590693 | 1.1:+60577891 | MS.gene005168:CDS |
GCACTTCCTCAACTTTGATG+TGG | 0.590805 | 1.1:-60577952 | None:intergenic |
CCGAAAAGTAACCTAGATTG+TGG | 0.592635 | 1.1:-60575736 | None:intergenic |
AGATGAAATACTCAGGGAGA+TGG | 0.595348 | 1.1:+60579060 | MS.gene005168:CDS |
CTTCAACGAAATAACTGTGA+AGG | 0.595665 | 1.1:+60575640 | MS.gene005168:CDS |
CAAAGAAGCTTAAGAGAAGG+TGG | 0.596830 | 1.1:+60576100 | MS.gene005168:CDS |
ATGCCAAGAAGCGAAATTGG+AGG | 0.597152 | 1.1:+60575964 | MS.gene005168:CDS |
AAAATGGAATATTCCCGTGC+CGG | 0.598414 | 1.1:+60577644 | MS.gene005168:CDS |
AGCATCGATTACTTCCTCGC+AGG | 0.600178 | 1.1:-60576262 | None:intergenic |
GATAAATTTGAAGATCGTTG+TGG | 0.605781 | 1.1:+60578740 | MS.gene005168:CDS |
TGATAGTTGGATCTTCTGGT+AGG | 0.608458 | 1.1:-60576305 | None:intergenic |
TGGACTCTTGATACTTGATG+AGG | 0.608858 | 1.1:+60577911 | MS.gene005168:CDS |
GGAATATACTGCCGTACATG+CGG | 0.610029 | 1.1:+60576874 | MS.gene005168:CDS |
ACTCAGGGAGATGGTTGAAG+AGG | 0.610175 | 1.1:+60579069 | MS.gene005168:CDS |
AGATGACGCGGTAACAAACC+AGG | 0.611437 | 1.1:-60575779 | None:intergenic |
GCAGGGTGCAAATGCTGATG+AGG | 0.611917 | 1.1:+60576783 | MS.gene005168:intron |
CAAAGACCACACTCTACACA+TGG | 0.613075 | 1.1:+60577607 | MS.gene005168:CDS |
CACTCGGGTCAATACACCCA+TGG | 0.615844 | 1.1:+60578432 | MS.gene005168:CDS |
CAGAAGAGGCAAACTAGAGG+AGG | 0.618526 | 1.1:+60578115 | MS.gene005168:CDS |
AAATTCACACAGAAAGCGCA+TGG | 0.619203 | 1.1:+60577866 | MS.gene005168:CDS |
GAGCATGATTATGACGGAGA+AGG | 0.621402 | 1.1:+60575928 | MS.gene005168:CDS |
AATCTCACGTGTGATGAGCA+AGG | 0.622148 | 1.1:+60578574 | MS.gene005168:CDS |
TCACTTGAGCATGATTATGA+CGG | 0.623465 | 1.1:+60575922 | MS.gene005168:CDS |
GATTGAAGATGAAATACTCA+GGG | 0.623647 | 1.1:+60579054 | MS.gene005168:CDS |
CATGAAGAACAGGATCATAG+AGG | 0.626014 | 1.1:+60576216 | MS.gene005168:CDS |
GAAGCGATACAATCCAAAGA+AGG | 0.629502 | 1.1:+60576159 | MS.gene005168:CDS |
AAAGAAAACGTATCGGAAAG+CGG | 0.631788 | 1.1:+60576354 | MS.gene005168:CDS |
AATGAACTCAAATATTGATG+CGG | 0.633014 | 1.1:+60578199 | MS.gene005168:CDS |
ATGTGAACATGATTATCGAT+TGG | 0.633134 | 1.1:+60576840 | MS.gene005168:CDS |
GAAACTGCAAAAGAAAATGG+CGG | 0.634136 | 1.1:+60578370 | MS.gene005168:CDS |
GGACTCTTGATACTTGATGA+GGG | 0.637751 | 1.1:+60577912 | MS.gene005168:CDS |
GCACAAAGAAGCTTAAGAGA+AGG | 0.639100 | 1.1:+60576097 | MS.gene005168:CDS |
GAATGGCTCATGGGAACCTG+TGG | 0.639123 | 1.1:+60575117 | MS.gene005168:CDS |
AAAGAGAAATCTGACACAAG+TGG | 0.641751 | 1.1:+60577474 | MS.gene005168:CDS |
GCAGGAGAAAGAAAACGTAT+CGG | 0.642258 | 1.1:+60576347 | MS.gene005168:CDS |
GTCACAACCTTGCACCAGTG+AGG | 0.646068 | 1.1:+60578615 | MS.gene005168:CDS |
GTACAGAAGAGGCAAACTAG+AGG | 0.650218 | 1.1:+60578112 | MS.gene005168:CDS |
TGTAATGATGAAAAGTTGGA+AGG | 0.659731 | 1.1:+60576036 | MS.gene005168:CDS |
GAAGTACCACATCAAAGTTG+AGG | 0.659873 | 1.1:+60577946 | MS.gene005168:CDS |
GTGGATAAGATACACCGGCA+CGG | 0.666067 | 1.1:-60577658 | None:intergenic |
TTGTTGAAGATCCTTCCGAA+TGG | 0.668864 | 1.1:+60579020 | MS.gene005168:CDS |
AACCTTCTTTAAAGATGACG+CGG | 0.674091 | 1.1:-60575791 | None:intergenic |
GTCTACGACGCTCAAAACGT+AGG | 0.683290 | 1.1:+60575986 | MS.gene005168:CDS |
CAGCTGTGGATAAGATACAC+CGG | 0.684401 | 1.1:-60577663 | None:intergenic |
GAGAAATCTGACACAAGTGG+TGG | 0.685073 | 1.1:+60577477 | MS.gene005168:CDS |
AACCCATGACAAGAACACTA+GGG | 0.686530 | 1.1:-60577803 | None:intergenic |
AATGATGAAAAGTTGGAAGG+TGG | 0.696462 | 1.1:+60576039 | MS.gene005168:CDS |
GGAAGCGCCTCATTTACTAG+AGG | 0.697989 | 1.1:+60578136 | MS.gene005168:CDS |
TATGAGTTTGTTGTGCATGG+AGG | 0.703519 | 1.1:-60575180 | None:intergenic |
ATGACGGAGAAGGTGCAATG+CGG | 0.752637 | 1.1:+60575938 | MS.gene005168:CDS |
GTTAAATGCTGATACCTGCG+AGG | 0.758695 | 1.1:+60576248 | MS.gene005168:CDS |
GTTGATGACTGGATCCATGG+AGG | 0.768053 | 1.1:+60578934 | MS.gene005168:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAATAAATGTATACAGA+AGG | - | chr1.1:60575402-60575421 | None:intergenic | 15.0% |
!! | AATCATGATTAATTTCTTAT+TGG | - | chr1.1:60574899-60574918 | None:intergenic | 15.0% |
!! | ATATGACAATTATGATTTAT+AGG | + | chr1.1:60576647-60576666 | MS.gene005168:intron | 15.0% |
!!! | GATTTAAATACGTTATTTTT+TGG | + | chr1.1:60576704-60576723 | MS.gene005168:intron | 15.0% |
!!! | GTAAAACATTTTATACATAT+AGG | - | chr1.1:60576552-60576571 | None:intergenic | 15.0% |
!!! | TTGATGCAAATAATTTTTTT+CGG | - | chr1.1:60574580-60574599 | None:intergenic | 15.0% |
!! | AGTTTATGTTAATGAATTAC+CGG | - | chr1.1:60574873-60574892 | None:intergenic | 20.0% |
!! | ATAAATATAGAAGAACTACT+TGG | + | chr1.1:60578960-60578979 | MS.gene005168:CDS | 20.0% |
!! | TGTAAATTAAGTTCCTTATT+TGG | + | chr1.1:60577114-60577133 | MS.gene005168:intron | 20.0% |
!! | TGTTTAGAAATAAGAATTAG+AGG | - | chr1.1:60575080-60575099 | None:intergenic | 20.0% |
!!! | AACTCATAAAAATTGATTCT+GGG | + | chr1.1:60575140-60575159 | MS.gene005168:CDS | 20.0% |
!!! | ACTTTGTTTCAAAACAATTT+TGG | + | chr1.1:60578017-60578036 | MS.gene005168:CDS | 20.0% |
!!! | CTTTGTTTCAAAACAATTTT+GGG | + | chr1.1:60578018-60578037 | MS.gene005168:CDS | 20.0% |
!!! | TAATTACAAGTTTGAAATCA+CGG | - | chr1.1:60577090-60577109 | None:intergenic | 20.0% |
!!! | TGAAGTTAATTCTTTTAGAA+GGG | + | chr1.1:60575687-60575706 | MS.gene005168:CDS | 20.0% |
!!! | TGATGCAAATAATTTTTTTC+GGG | - | chr1.1:60574579-60574598 | None:intergenic | 20.0% |
!!! | TTGTTACATATTTTCTCTAT+TGG | + | chr1.1:60577180-60577199 | MS.gene005168:intron | 20.0% |
!!! | TTTGTTTCAAAACAATTTTG+GGG | + | chr1.1:60578019-60578038 | MS.gene005168:CDS | 20.0% |
!!! | TTTTTTACTTGACTTACAAT+GGG | - | chr1.1:60576934-60576953 | None:intergenic | 20.0% |
! | AAAACATATCCAACCAAATA+AGG | - | chr1.1:60577130-60577149 | None:intergenic | 25.0% |
! | AAAATTTATTCACGAAGTTC+TGG | + | chr1.1:60578073-60578092 | MS.gene005168:CDS | 25.0% |
! | AACTATTAAATACCATAGCA+GGG | + | chr1.1:60576766-60576785 | MS.gene005168:intron | 25.0% |
! | AATGAACTCAAATATTGATG+CGG | + | chr1.1:60578199-60578218 | MS.gene005168:CDS | 25.0% |
! | AATGTAATTGACAATCTTGT+AGG | + | chr1.1:60574981-60575000 | MS.gene005168:intron | 25.0% |
! | AGATTGTAATGATGAAAAGT+TGG | + | chr1.1:60576032-60576051 | MS.gene005168:CDS | 25.0% |
! | GTTGTCTAATTTATATCCAA+TGG | + | chr1.1:60577202-60577221 | MS.gene005168:intron | 25.0% |
! | TCTAATTTATATCCAATGGT+AGG | + | chr1.1:60577206-60577225 | MS.gene005168:intron | 25.0% |
! | TGACAATTATGATTTATAGG+CGG | + | chr1.1:60576650-60576669 | MS.gene005168:intron | 25.0% |
! | TTCATAGGACTACTAATATT+AGG | - | chr1.1:60575874-60575893 | None:intergenic | 25.0% |
! | TTGAACTTCAAATCAGAAAA+CGG | + | chr1.1:60575898-60575917 | MS.gene005168:CDS | 25.0% |
! | TTGAAGTTCAAAACATTCAT+AGG | - | chr1.1:60575889-60575908 | None:intergenic | 25.0% |
!! | AATCATTTTCAGTGGAAAAA+TGG | + | chr1.1:60578659-60578678 | MS.gene005168:CDS | 25.0% |
!! | AATTAAGTTCCTTATTTGGT+TGG | + | chr1.1:60577118-60577137 | MS.gene005168:intron | 25.0% |
!! | AGAACTTCGTGAATAAATTT+TGG | - | chr1.1:60578074-60578093 | None:intergenic | 25.0% |
!! | ATATGGATTTGATAGCTTTA+TGG | + | chr1.1:60576136-60576155 | MS.gene005168:CDS | 25.0% |
!! | CAAAGAAAATGATAGTGTTT+GGG | + | chr1.1:60577350-60577369 | MS.gene005168:CDS | 25.0% |
!! | CTATCATTTTCTTTGGATAT+AGG | - | chr1.1:60577345-60577364 | None:intergenic | 25.0% |
!! | CTGAAGTTAATTCTTTTAGA+AGG | + | chr1.1:60575686-60575705 | MS.gene005168:CDS | 25.0% |
!! | GAACTCATAAAAATTGATTC+TGG | + | chr1.1:60575139-60575158 | MS.gene005168:CDS | 25.0% |
!! | GTAAACTTTTATGATGATCA+AGG | + | chr1.1:60575538-60575557 | MS.gene005168:CDS | 25.0% |
!! | GTATGATATATTTAAGATGC+CGG | + | chr1.1:60574851-60574870 | MS.gene005168:intron | 25.0% |
!! | TATTTGACTTCAACCATAAA+TGG | - | chr1.1:60576618-60576637 | None:intergenic | 25.0% |
!! | TATTTGAGAATCATTTTCAG+TGG | + | chr1.1:60578651-60578670 | MS.gene005168:CDS | 25.0% |
!!! | AACAAATTTGCTTTGAGAAA+AGG | + | chr1.1:60578524-60578543 | MS.gene005168:CDS | 25.0% |
!!! | GTTTTTTACTTGACTTACAA+TGG | - | chr1.1:60576935-60576954 | None:intergenic | 25.0% |
!!! | TATGGATTTGATAGCTTTAT+GGG | + | chr1.1:60576137-60576156 | MS.gene005168:CDS | 25.0% |
!!! | TGGTTTTATCGTCTATTTTA+AGG | + | chr1.1:60576724-60576743 | MS.gene005168:intron | 25.0% |
!!! | TTAGATTTTAAGTACAGAAG+AGG | + | chr1.1:60578101-60578120 | MS.gene005168:CDS | 25.0% |
AACTCTATTAAAAACCTCAC+TGG | - | chr1.1:60578632-60578651 | None:intergenic | 30.0% | |
AAGAAAAGAGATGATGAGAA+AGG | - | chr1.1:60577538-60577557 | None:intergenic | 30.0% | |
AATGTATAGATTTGCAAACC+AGG | - | chr1.1:60578311-60578330 | None:intergenic | 30.0% | |
ACATCAAGTTATCTTCTTGA+TGG | + | chr1.1:60576438-60576457 | MS.gene005168:CDS | 30.0% | |
AGATTGAAGATGAAATACTC+AGG | + | chr1.1:60579053-60579072 | MS.gene005168:CDS | 30.0% | |
AGTAAGAAGATTGAACTTAC+TGG | - | chr1.1:60575340-60575359 | None:intergenic | 30.0% | |
ATACGATAATAGCGCTATAA+TGG | + | chr1.1:60574768-60574787 | MS.gene005168:intron | 30.0% | |
ATGTGAACATGATTATCGAT+TGG | + | chr1.1:60576840-60576859 | MS.gene005168:CDS | 30.0% | |
ATTGACTGTTGAACCATTTA+TGG | + | chr1.1:60576602-60576621 | MS.gene005168:intron | 30.0% | |
ATTGATGCGGAAAAAATGAA+GGG | + | chr1.1:60578212-60578231 | MS.gene005168:CDS | 30.0% | |
CAACTATTAAATACCATAGC+AGG | + | chr1.1:60576765-60576784 | MS.gene005168:intron | 30.0% | |
CACTGAAATAAAAACTCTGA+AGG | + | chr1.1:60575570-60575589 | MS.gene005168:CDS | 30.0% | |
CTTATCTTCTGTTCTCATTA+AGG | - | chr1.1:60577844-60577863 | None:intergenic | 30.0% | |
GATAAATTTGAAGATCGTTG+TGG | + | chr1.1:60578740-60578759 | MS.gene005168:CDS | 30.0% | |
GATTGAAGATGAAATACTCA+GGG | + | chr1.1:60579054-60579073 | MS.gene005168:CDS | 30.0% | |
GTAAGAAGATTGAACTTACT+GGG | - | chr1.1:60575339-60575358 | None:intergenic | 30.0% | |
TAACTTTCAGAAAATCACAG+TGG | - | chr1.1:60577015-60577034 | None:intergenic | 30.0% | |
TATTGATGCGGAAAAAATGA+AGG | + | chr1.1:60578211-60578230 | MS.gene005168:CDS | 30.0% | |
TCTATATTTATCTTCCTCCA+TGG | - | chr1.1:60578951-60578970 | None:intergenic | 30.0% | |
TGACACAAATAAAGAATCCA+AGG | + | chr1.1:60576813-60576832 | MS.gene005168:CDS | 30.0% | |
TGTAATGATGAAAAGTTGGA+AGG | + | chr1.1:60576036-60576055 | MS.gene005168:CDS | 30.0% | |
TTATCTTCTTGATGGAAATG+AGG | + | chr1.1:60576446-60576465 | MS.gene005168:CDS | 30.0% | |
! | AATAAAAACTCTGAAGGAAG+AGG | + | chr1.1:60575576-60575595 | MS.gene005168:CDS | 30.0% |
! | AGTTATTTCGTTGAAGTCTT+TGG | - | chr1.1:60575636-60575655 | None:intergenic | 30.0% |
! | CCAAACACTATCATTTTCTT+TGG | - | chr1.1:60577352-60577371 | None:intergenic | 30.0% |
! | CCAAAGAAAATGATAGTGTT+TGG | + | chr1.1:60577349-60577368 | MS.gene005168:CDS | 30.0% |
! | GAACATTGGTTATATTTGTG+AGG | - | chr1.1:60575505-60575524 | None:intergenic | 30.0% |
! | GCATTGAGAATTTTACTTTC+TGG | + | chr1.1:60577993-60578012 | MS.gene005168:CDS | 30.0% |
! | TAGCTTTTCTTGATCTTATC+CGG | - | chr1.1:60575225-60575244 | None:intergenic | 30.0% |
! | TATCGATTGGATGAACAAAT+TGG | + | chr1.1:60576853-60576872 | MS.gene005168:CDS | 30.0% |
! | TCAATTTTTATGAGTTCCAC+AGG | - | chr1.1:60575136-60575155 | None:intergenic | 30.0% |
! | TTACGATAATTAGCATCGAA+TGG | - | chr1.1:60574612-60574631 | None:intergenic | 30.0% |
! | TTCTTGTATGATTTTCAGTG+AGG | + | chr1.1:60578994-60579013 | MS.gene005168:CDS | 30.0% |
! | TTCTTTGGAAAAACATTGCA+GGG | + | chr1.1:60577430-60577449 | MS.gene005168:CDS | 30.0% |
! | TTTCTTTGGAAAAACATTGC+AGG | + | chr1.1:60577429-60577448 | MS.gene005168:CDS | 30.0% |
! | TTTCTTTTGAACACCTTCTT+TGG | - | chr1.1:60576175-60576194 | None:intergenic | 30.0% |
!! | AAAAAGCTTTCGAGTTTCTT+TGG | + | chr1.1:60577415-60577434 | MS.gene005168:CDS | 30.0% |
!! | TACGTAATGTTCAAGTTGTA+TGG | - | chr1.1:60576013-60576032 | None:intergenic | 30.0% |
!! | TTCGTGAATAAATTTTGGTC+TGG | - | chr1.1:60578069-60578088 | None:intergenic | 30.0% |
!!! | ATAGCTTGCTTTGTTTTTGA+AGG | - | chr1.1:60578863-60578882 | None:intergenic | 30.0% |
!!! | ATCGTCTATTTTAAGGCTAA+AGG | + | chr1.1:60576731-60576750 | MS.gene005168:intron | 30.0% |
!!! | GTTTTAATTAGCAACGAGTT+TGG | + | chr1.1:60576974-60576993 | MS.gene005168:intron | 30.0% |
!!! | TAGTTTTTTCAACTCTTCAC+CGG | - | chr1.1:60578498-60578517 | None:intergenic | 30.0% |
!!! | TGCAAATAATTTTTTTCGGG+CGG | - | chr1.1:60574576-60574595 | None:intergenic | 30.0% |
!!! | TTTGTGAGGTTTTTTGTGTA+TGG | - | chr1.1:60575491-60575510 | None:intergenic | 30.0% |
AAACTGCAAAAGAAAATGGC+GGG | + | chr1.1:60578371-60578390 | MS.gene005168:CDS | 35.0% | |
AAAGAAAACGTATCGGAAAG+CGG | + | chr1.1:60576354-60576373 | MS.gene005168:CDS | 35.0% | |
AAAGAGAAATCTGACACAAG+TGG | + | chr1.1:60577474-60577493 | MS.gene005168:CDS | 35.0% | |
AAAGAGATTCTGCAACTAAC+TGG | + | chr1.1:60578683-60578702 | MS.gene005168:CDS | 35.0% | |
AACTTTGATGTGGTACTTCT+AGG | - | chr1.1:60577945-60577964 | None:intergenic | 35.0% | |
AAGAACTACTTGGAAAGAGT+GGG | + | chr1.1:60578970-60578989 | MS.gene005168:CDS | 35.0% | |
AAGCTTGTGCATCAAGTTAT+GGG | + | chr1.1:60575841-60575860 | MS.gene005168:CDS | 35.0% | |
AAGGAAGAGGATAATGTGAT+TGG | + | chr1.1:60575589-60575608 | MS.gene005168:CDS | 35.0% | |
AATGATGAAAAGTTGGAAGG+TGG | + | chr1.1:60576039-60576058 | MS.gene005168:CDS | 35.0% | |
AGTAAAATTCTCAATGCTGC+TGG | - | chr1.1:60577990-60578009 | None:intergenic | 35.0% | |
ATATGTCAATTCCAGGTCTT+AGG | - | chr1.1:60575270-60575289 | None:intergenic | 35.0% | |
ATCATGTTCACATGTTTCCT+TGG | - | chr1.1:60576833-60576852 | None:intergenic | 35.0% | |
ATGACAAGTAAAAGACGAGA+TGG | - | chr1.1:60576494-60576513 | None:intergenic | 35.0% | |
CATGAAATCGACATGAACAT+TGG | - | chr1.1:60575519-60575538 | None:intergenic | 35.0% | |
CTTCAACGAAATAACTGTGA+AGG | + | chr1.1:60575640-60575659 | MS.gene005168:CDS | 35.0% | |
GAAACAATGCAGTGAAGATA+CGG | + | chr1.1:60577257-60577276 | MS.gene005168:CDS | 35.0% | |
GAAACTGCAAAAGAAAATGG+CGG | + | chr1.1:60578370-60578389 | MS.gene005168:CDS | 35.0% | |
GCAGAAACTGCAAAAGAAAA+TGG | + | chr1.1:60578367-60578386 | MS.gene005168:CDS | 35.0% | |
GGCAAAAAGAGTTCGAAAAA+TGG | + | chr1.1:60577628-60577647 | MS.gene005168:CDS | 35.0% | |
GGTAGAAAATCCTGATGATT+TGG | + | chr1.1:60576383-60576402 | MS.gene005168:CDS | 35.0% | |
GGTTGCATTTGTCATAAGAT+CGG | + | chr1.1:60575810-60575829 | MS.gene005168:CDS | 35.0% | |
GTCTAGAAAAGATCAAAAGC+TGG | + | chr1.1:60577772-60577791 | MS.gene005168:CDS | 35.0% | |
GTGCTTCGAAAAATCACAAA+TGG | + | chr1.1:60578242-60578261 | MS.gene005168:CDS | 35.0% | |
TAACTAGATGTGCTATGCAT+TGG | + | chr1.1:60574931-60574950 | MS.gene005168:intron | 35.0% | |
TAAGAGAAGGTGGTTGTTTA+AGG | + | chr1.1:60576110-60576129 | MS.gene005168:CDS | 35.0% | |
TATCGATGATCATGAAGAAC+AGG | + | chr1.1:60576206-60576225 | MS.gene005168:CDS | 35.0% | |
TATGATGATCAAGGTTCACT+TGG | + | chr1.1:60575547-60575566 | MS.gene005168:CDS | 35.0% | |
TATTTCGTTGAAGTCTTTGG+AGG | - | chr1.1:60575633-60575652 | None:intergenic | 35.0% | |
TCAATCAATGCTTGTTCTGA+AGG | + | chr1.1:60578785-60578804 | MS.gene005168:CDS | 35.0% | |
TCACTTGAGCATGATTATGA+CGG | + | chr1.1:60575922-60575941 | MS.gene005168:CDS | 35.0% | |
TGACAAGTAAAAGACGAGAT+GGG | - | chr1.1:60576493-60576512 | None:intergenic | 35.0% | |
TGCTTGACACCATTAGAATT+TGG | - | chr1.1:60577741-60577760 | None:intergenic | 35.0% | |
TGTCTTTCTTCACTGATAGT+TGG | - | chr1.1:60576321-60576340 | None:intergenic | 35.0% | |
TTCAACGACACCAAAATCAA+TGG | + | chr1.1:60577701-60577720 | MS.gene005168:CDS | 35.0% | |
! | AACCTTCTTTAAAGATGACG+CGG | - | chr1.1:60575794-60575813 | None:intergenic | 35.0% |
! | AGCTTCAAGAGTGATTTTCT+TGG | + | chr1.1:60578823-60578842 | MS.gene005168:CDS | 35.0% |
! | AGGTGGTGATAATGTTTCTT+CGG | + | chr1.1:60576056-60576075 | MS.gene005168:CDS | 35.0% |
! | AGTTTTTGTCTGATCTTTCC+TGG | + | chr1.1:60575761-60575780 | MS.gene005168:CDS | 35.0% |
! | GCATTTGAAGCAGTATTGAA+TGG | + | chr1.1:60575100-60575119 | MS.gene005168:intron | 35.0% |
! | GTAATTTGTCATCAGACATC+CGG | + | chr1.1:60575203-60575222 | MS.gene005168:CDS | 35.0% |
! | TAAACCATTTTCTCTTGACC+AGG | - | chr1.1:60578902-60578921 | None:intergenic | 35.0% |
! | TAATGGTGTCAAGCATGATT+TGG | + | chr1.1:60577746-60577765 | MS.gene005168:CDS | 35.0% |
! | TGATTTTCTTGGATTCTGAG+TGG | + | chr1.1:60578834-60578853 | MS.gene005168:CDS | 35.0% |
! | TTACAAGTTTGAAATCACGG+TGG | - | chr1.1:60577087-60577106 | None:intergenic | 35.0% |
!! | AAAGTTGAGGAAGTGCTTAA+TGG | + | chr1.1:60577959-60577978 | MS.gene005168:CDS | 35.0% |
!! | AGCGCTATAATGGATATTCA+TGG | + | chr1.1:60574778-60574797 | MS.gene005168:intron | 35.0% |
!! | GTATATCACTTGTTGATGAC+TGG | + | chr1.1:60578923-60578942 | MS.gene005168:CDS | 35.0% |
!! | GTTGAGCTTTTGATAACACT+CGG | + | chr1.1:60578416-60578435 | MS.gene005168:CDS | 35.0% |
!! | TACTATGAGTTTGTTGTGCA+TGG | - | chr1.1:60575186-60575205 | None:intergenic | 35.0% |
!! | TGCATGTTTTCTTTGAGTTC+AGG | - | chr1.1:60577384-60577403 | None:intergenic | 35.0% |
!! | TTGAGCTTTTGATAACACTC+GGG | + | chr1.1:60578417-60578436 | MS.gene005168:CDS | 35.0% |
!!! | CACAATCTAGGTTACTTTTC+GGG | + | chr1.1:60575737-60575756 | MS.gene005168:CDS | 35.0% |
!!! | CCACAATCTAGGTTACTTTT+CGG | + | chr1.1:60575736-60575755 | MS.gene005168:CDS | 35.0% |
!!! | GAAACTCGAAAGCTTTTTTC+TGG | - | chr1.1:60577413-60577432 | None:intergenic | 35.0% |
AAAATGGAATATTCCCGTGC+CGG | + | chr1.1:60577644-60577663 | MS.gene005168:CDS | 40.0% | |
AACCCATGACAAGAACACTA+GGG | - | chr1.1:60577806-60577825 | None:intergenic | 40.0% | |
AATCTTCTCAGCTTGCCATT+CGG | - | chr1.1:60579038-60579057 | None:intergenic | 40.0% | |
AATTCCAGGTCTTAGGAAAC+TGG | - | chr1.1:60575263-60575282 | None:intergenic | 40.0% | |
AGATGAAATACTCAGGGAGA+TGG | + | chr1.1:60579060-60579079 | MS.gene005168:CDS | 40.0% | |
AGCACAGATATGTCAATTCC+AGG | - | chr1.1:60575277-60575296 | None:intergenic | 40.0% | |
AGTTCTTCTGATACTCTTCC+TGG | + | chr1.1:60578290-60578309 | MS.gene005168:CDS | 40.0% | |
ATATCCAATGGTAGGTGACA+AGG | + | chr1.1:60577214-60577233 | MS.gene005168:intron | 40.0% | |
CAAAGAAGCTTAAGAGAAGG+TGG | + | chr1.1:60576100-60576119 | MS.gene005168:CDS | 40.0% | |
CAAGCTTGTGCATCAAGTTA+TGG | + | chr1.1:60575840-60575859 | MS.gene005168:CDS | 40.0% | |
CATGAAGAACAGGATCATAG+AGG | + | chr1.1:60576216-60576235 | MS.gene005168:CDS | 40.0% | |
CCGAAAAGTAACCTAGATTG+TGG | - | chr1.1:60575739-60575758 | None:intergenic | 40.0% | |
CCTGGAGTTCCAAATTCTAA+TGG | + | chr1.1:60577729-60577748 | MS.gene005168:CDS | 40.0% | |
GAAAAACATTGCAGGGTCTA+TGG | + | chr1.1:60577437-60577456 | MS.gene005168:CDS | 40.0% | |
GAAGAACTACTTGGAAAGAG+TGG | + | chr1.1:60578969-60578988 | MS.gene005168:CDS | 40.0% | |
GAAGCGATACAATCCAAAGA+AGG | + | chr1.1:60576159-60576178 | MS.gene005168:CDS | 40.0% | |
GATACATGTGTCTAACTCGT+TGG | + | chr1.1:60574813-60574832 | MS.gene005168:intron | 40.0% | |
GCACAAAGAAGCTTAAGAGA+AGG | + | chr1.1:60576097-60576116 | MS.gene005168:CDS | 40.0% | |
GCAGGAGAAAGAAAACGTAT+CGG | + | chr1.1:60576347-60576366 | MS.gene005168:CDS | 40.0% | |
GGAAGTAATCGATGCTTACA+TGG | + | chr1.1:60576269-60576288 | MS.gene005168:CDS | 40.0% | |
GGACTCTTGATACTTGATGA+GGG | + | chr1.1:60577912-60577931 | MS.gene005168:CDS | 40.0% | |
TAACCCATGACAAGAACACT+AGG | - | chr1.1:60577807-60577826 | None:intergenic | 40.0% | |
TCAACTGATGCTACTGATCT+TGG | + | chr1.1:60577315-60577334 | MS.gene005168:CDS | 40.0% | |
TCACTGATAGTTGGATCTTC+TGG | - | chr1.1:60576312-60576331 | None:intergenic | 40.0% | |
TCATCAAGTATCAAGAGTCC+AGG | - | chr1.1:60577912-60577931 | None:intergenic | 40.0% | |
TGAAGAAAGACAGTTTGAGC+AGG | + | chr1.1:60576329-60576348 | MS.gene005168:CDS | 40.0% | |
TGATAGTTGGATCTTCTGGT+AGG | - | chr1.1:60576308-60576327 | None:intergenic | 40.0% | |
TGGACTCTTGATACTTGATG+AGG | + | chr1.1:60577911-60577930 | MS.gene005168:CDS | 40.0% | |
TGTGTTATATCTCATGCTCC+TGG | + | chr1.1:60577501-60577520 | MS.gene005168:CDS | 40.0% | |
TTAAAAACCTCACTGGTGCA+AGG | - | chr1.1:60578625-60578644 | None:intergenic | 40.0% | |
TTGTGCATGGAGGAAATGTA+TGG | - | chr1.1:60575173-60575192 | None:intergenic | 40.0% | |
TTGTTGAAGATCCTTCCGAA+TGG | + | chr1.1:60579020-60579039 | MS.gene005168:CDS | 40.0% | |
! | AAATTCACACAGAAAGCGCA+TGG | + | chr1.1:60577866-60577885 | MS.gene005168:CDS | 40.0% |
! | AAGCAGTATTGAATGGCTCA+TGG | + | chr1.1:60575107-60575126 | MS.gene005168:CDS | 40.0% |
! | AGCAGTATTGAATGGCTCAT+GGG | + | chr1.1:60575108-60575127 | MS.gene005168:CDS | 40.0% |
! | AGGACTAATGGTCTTTTCTG+TGG | - | chr1.1:60577582-60577601 | None:intergenic | 40.0% |
! | CACAATCTCGTGTTGTTCAT+CGG | - | chr1.1:60578348-60578367 | None:intergenic | 40.0% |
! | CCATTAGAATTTGGAACTCC+AGG | - | chr1.1:60577732-60577751 | None:intergenic | 40.0% |
! | GAAAATCCTGATGATTTGGC+TGG | + | chr1.1:60576387-60576406 | MS.gene005168:CDS | 40.0% |
! | GAAGTACCACATCAAAGTTG+AGG | + | chr1.1:60577946-60577965 | MS.gene005168:CDS | 40.0% |
! | GGTGGTGATAATGTTTCTTC+GGG | + | chr1.1:60576057-60576076 | MS.gene005168:CDS | 40.0% |
! | GTGGTTGTTTAAGGAGCATA+TGG | + | chr1.1:60576119-60576138 | MS.gene005168:CDS | 40.0% |
! | TACCGCGTCATCTTTAAAGA+AGG | + | chr1.1:60575789-60575808 | MS.gene005168:CDS | 40.0% |
! | TGATGATTTGGCTGGCATAT+GGG | + | chr1.1:60576395-60576414 | MS.gene005168:CDS | 40.0% |
! | TGTGCAGCTAAGTTTTTCTC+CGG | + | chr1.1:60578476-60578495 | MS.gene005168:CDS | 40.0% |
! | TTTTCACAAAGCCGCATGTA+CGG | - | chr1.1:60576888-60576907 | None:intergenic | 40.0% |
! | TTTTTGCCATGTGTAGAGTG+TGG | - | chr1.1:60577616-60577635 | None:intergenic | 40.0% |
!! | TATGAGTTTGTTGTGCATGG+AGG | - | chr1.1:60575183-60575202 | None:intergenic | 40.0% |
!! | TTGGTGTCGTTGAATGTATC+TGG | - | chr1.1:60577695-60577714 | None:intergenic | 40.0% |
!!! | CTGCTGTTTTGATCAACCAT+GGG | - | chr1.1:60578451-60578470 | None:intergenic | 40.0% |
!!! | TCTGCTGTTTTGATCAACCA+TGG | - | chr1.1:60578452-60578471 | None:intergenic | 40.0% |
AATCTCACGTGTGATGAGCA+AGG | + | chr1.1:60578574-60578593 | MS.gene005168:CDS | 45.0% | |
ACACCCTAGTGTTCTTGTCA+TGG | + | chr1.1:60577800-60577819 | MS.gene005168:CDS | 45.0% | |
ACGCGCGAGAAAATTCTTCT+TGG | + | chr1.1:60578160-60578179 | MS.gene005168:CDS | 45.0% | |
ACGTGTGATGAGCAAGGAAA+AGG | + | chr1.1:60578580-60578599 | MS.gene005168:CDS | 45.0% | |
AGACCTCCAATTTCGCTTCT+TGG | - | chr1.1:60575970-60575989 | None:intergenic | 45.0% | |
ATGCCAAGAAGCGAAATTGG+AGG | + | chr1.1:60575964-60575983 | MS.gene005168:CDS | 45.0% | |
CAAAGACCACACTCTACACA+TGG | + | chr1.1:60577607-60577626 | MS.gene005168:CDS | 45.0% | |
CACCCTAGTGTTCTTGTCAT+GGG | + | chr1.1:60577801-60577820 | MS.gene005168:CDS | 45.0% | |
CAGCTGTGGATAAGATACAC+CGG | - | chr1.1:60577666-60577685 | None:intergenic | 45.0% | |
CATATGCCAGCCAAATCATC+AGG | - | chr1.1:60576396-60576415 | None:intergenic | 45.0% | |
CATGTGTAGAGTGTGGTCTT+TGG | - | chr1.1:60577609-60577628 | None:intergenic | 45.0% | |
CCAATGCCAAGAAGCGAAAT+TGG | + | chr1.1:60575961-60575980 | MS.gene005168:CDS | 45.0% | |
CCAATTTCGCTTCTTGGCAT+TGG | - | chr1.1:60575964-60575983 | None:intergenic | 45.0% | |
CTCAACCTCAAGAGAGTAAC+CGG | - | chr1.1:60578402-60578421 | None:intergenic | 45.0% | |
GAGAAATCTGACACAAGTGG+TGG | + | chr1.1:60577477-60577496 | MS.gene005168:CDS | 45.0% | |
GCACTTCCTCAACTTTGATG+TGG | - | chr1.1:60577955-60577974 | None:intergenic | 45.0% | |
GCTCTTCATTGCCACAATCT+AGG | + | chr1.1:60575725-60575744 | MS.gene005168:CDS | 45.0% | |
GGAATATACTGCCGTACATG+CGG | + | chr1.1:60576874-60576893 | MS.gene005168:CDS | 45.0% | |
GGTAGGTGACAAGGCTAAAA+TGG | + | chr1.1:60577223-60577242 | MS.gene005168:intron | 45.0% | |
GTACAGAAGAGGCAAACTAG+AGG | + | chr1.1:60578112-60578131 | MS.gene005168:CDS | 45.0% | |
GTTAAATGCTGATACCTGCG+AGG | + | chr1.1:60576248-60576267 | MS.gene005168:CDS | 45.0% | |
TCGACCTGGTCAAGAGAAAA+TGG | + | chr1.1:60578895-60578914 | MS.gene005168:CDS | 45.0% | |
TGCTCATCACACGTGAGATT+AGG | - | chr1.1:60578574-60578593 | None:intergenic | 45.0% | |
! | AGAAAGGTTTTTCCAGCTCC+AGG | - | chr1.1:60577522-60577541 | None:intergenic | 45.0% |
! | CCAAAATCAATGGTTCTGCC+TGG | + | chr1.1:60577711-60577730 | MS.gene005168:CDS | 45.0% |
! | CTGATGATTTGGCTGGCATA+TGG | + | chr1.1:60576394-60576413 | MS.gene005168:CDS | 45.0% |
! | GAGCATGATTATGACGGAGA+AGG | + | chr1.1:60575928-60575947 | MS.gene005168:CDS | 45.0% |
! | GTTTGAAATCACGGTGGATC+TGG | - | chr1.1:60577081-60577100 | None:intergenic | 45.0% |
!! | AAAGCATTGAGGGAAAGTCC+TGG | + | chr1.1:60577891-60577910 | MS.gene005168:CDS | 45.0% |
!! | CTTGTTGATGACTGGATCCA+TGG | + | chr1.1:60578931-60578950 | MS.gene005168:CDS | 45.0% |
!! | GTCTTTGGAGCTAGGACTAA+TGG | - | chr1.1:60577594-60577613 | None:intergenic | 45.0% |
!! | TTAGCCTTGTCACCTACCAT+TGG | - | chr1.1:60577221-60577240 | None:intergenic | 45.0% |
!!! | CCAGGCAGAACCATTGATTT+TGG | - | chr1.1:60577714-60577733 | None:intergenic | 45.0% |
!! | TATATAAAAAAAATTATCAA+TGG | + | chr1.1:60574708-60574727 | MS.gene005168:intron | 5.0% |
ACTCAGGGAGATGGTTGAAG+AGG | + | chr1.1:60579069-60579088 | MS.gene005168:CDS | 50.0% | |
AGATGACGCGGTAACAAACC+AGG | - | chr1.1:60575782-60575801 | None:intergenic | 50.0% | |
ATATCTCATGCTCCTGGAGC+TGG | + | chr1.1:60577507-60577526 | MS.gene005168:CDS | 50.0% | |
CAGAAGAGGCAAACTAGAGG+AGG | + | chr1.1:60578115-60578134 | MS.gene005168:CDS | 50.0% | |
GTCTACGACGCTCAAAACGT+AGG | + | chr1.1:60575986-60576005 | MS.gene005168:CDS | 50.0% | |
GTGGATAAGATACACCGGCA+CGG | - | chr1.1:60577661-60577680 | None:intergenic | 50.0% | |
TCAGCATTTGCACCCTGCTA+TGG | - | chr1.1:60576781-60576800 | None:intergenic | 50.0% | |
TGCTCCAGTTTCCTAAGACC+TGG | + | chr1.1:60575256-60575275 | MS.gene005168:CDS | 50.0% | |
TGGATAAGATACACCGGCAC+GGG | - | chr1.1:60577660-60577679 | None:intergenic | 50.0% | |
TTCTCAGCTTGCCATTCGGA+AGG | - | chr1.1:60579034-60579053 | None:intergenic | 50.0% | |
! | ATGACGGAGAAGGTGCAATG+CGG | + | chr1.1:60575938-60575957 | MS.gene005168:CDS | 50.0% |
!! | AAGAAAATGGCGGGCTGTAC+CGG | + | chr1.1:60578380-60578399 | MS.gene005168:CDS | 50.0% |
!! | AGAGTGTGGTCTTTGGAGCT+AGG | - | chr1.1:60577602-60577621 | None:intergenic | 50.0% |
!! | AGCATCGATTACTTCCTCGC+AGG | - | chr1.1:60576265-60576284 | None:intergenic | 50.0% |
!! | AGCGCATGGCTAAAGCATTG+AGG | + | chr1.1:60577880-60577899 | MS.gene005168:CDS | 50.0% |
!! | CTGTACCGGTTACTCTCTTG+AGG | + | chr1.1:60578394-60578413 | MS.gene005168:CDS | 50.0% |
!! | GCGCATGGCTAAAGCATTGA+GGG | + | chr1.1:60577881-60577900 | MS.gene005168:CDS | 50.0% |
!! | GGAAGCGCCTCATTTACTAG+AGG | + | chr1.1:60578136-60578155 | MS.gene005168:CDS | 50.0% |
!! | GTTGATGACTGGATCCATGG+AGG | + | chr1.1:60578934-60578953 | MS.gene005168:CDS | 50.0% |
CACTCGGGTCAATACACCCA+TGG | + | chr1.1:60578432-60578451 | MS.gene005168:CDS | 55.0% | |
CGTATCGGAAAGCGGTGATG+AGG | + | chr1.1:60576362-60576381 | MS.gene005168:CDS | 55.0% | |
GAATGGCTCATGGGAACCTG+TGG | + | chr1.1:60575117-60575136 | MS.gene005168:CDS | 55.0% | |
GCAGGGTGCAAATGCTGATG+AGG | + | chr1.1:60576783-60576802 | MS.gene005168:intron | 55.0% | |
GCGCGTGCCTCTAGTAAATG+AGG | - | chr1.1:60578146-60578165 | None:intergenic | 55.0% | |
GTCACAACCTTGCACCAGTG+AGG | + | chr1.1:60578615-60578634 | MS.gene005168:CDS | 55.0% | |
! | ATTGCACGCGCTTTTCGACC+TGG | + | chr1.1:60578881-60578900 | MS.gene005168:CDS | 55.0% |
! | GTATCTGGCTTCGACAGCTG+TGG | - | chr1.1:60577680-60577699 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 60574570 | 60579147 | 60574570 | ID=MS.gene005168 |
chr1.1 | mRNA | 60574570 | 60579147 | 60574570 | ID=MS.gene005168.t1;Parent=MS.gene005168 |
chr1.1 | exon | 60574570 | 60574627 | 60574570 | ID=MS.gene005168.t1.exon1;Parent=MS.gene005168.t1 |
chr1.1 | CDS | 60574570 | 60574627 | 60574570 | ID=cds.MS.gene005168.t1;Parent=MS.gene005168.t1 |
chr1.1 | exon | 60575101 | 60575339 | 60575101 | ID=MS.gene005168.t1.exon2;Parent=MS.gene005168.t1 |
chr1.1 | CDS | 60575101 | 60575339 | 60575101 | ID=cds.MS.gene005168.t1;Parent=MS.gene005168.t1 |
chr1.1 | exon | 60575463 | 60576467 | 60575463 | ID=MS.gene005168.t1.exon3;Parent=MS.gene005168.t1 |
chr1.1 | CDS | 60575463 | 60576467 | 60575463 | ID=cds.MS.gene005168.t1;Parent=MS.gene005168.t1 |
chr1.1 | exon | 60576787 | 60576936 | 60576787 | ID=MS.gene005168.t1.exon4;Parent=MS.gene005168.t1 |
chr1.1 | CDS | 60576787 | 60576936 | 60576787 | ID=cds.MS.gene005168.t1;Parent=MS.gene005168.t1 |
chr1.1 | exon | 60577228 | 60577557 | 60577228 | ID=MS.gene005168.t1.exon5;Parent=MS.gene005168.t1 |
chr1.1 | CDS | 60577228 | 60577557 | 60577228 | ID=cds.MS.gene005168.t1;Parent=MS.gene005168.t1 |
chr1.1 | exon | 60577585 | 60579147 | 60577585 | ID=MS.gene005168.t1.exon6;Parent=MS.gene005168.t1 |
chr1.1 | CDS | 60577585 | 60579147 | 60577585 | ID=cds.MS.gene005168.t1;Parent=MS.gene005168.t1 |
Gene Sequence |
Protein sequence |