AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005213

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005213.t1 MTR_1g082660 98.828 256 2 1 1 255 1 256 0.0 518
MS.gene005213.t1 MTR_7g113680 81.154 260 44 2 1 255 52 311 8.81e-145 407
MS.gene005213.t1 MTR_3g099180 82.524 103 18 0 83 185 37 139 2.32e-58 185
MS.gene005213.t1 MTR_3g099180 82.524 103 18 0 83 185 37 139 2.34e-58 185
MS.gene005213.t1 MTR_2g023340 50.000 184 70 7 82 254 66 238 2.89e-53 172
MS.gene005213.t1 MTR_2g081600 59.341 91 36 1 100 189 21 111 1.05e-32 116
MS.gene005213.t1 MTR_2g081630 63.855 83 29 1 100 181 21 103 4.21e-32 114
MS.gene005213.t1 MTR_3g012030 39.744 78 47 0 102 179 9 86 5.52e-12 64.7
MS.gene005213.t1 MTR_8g041420 37.179 78 49 0 102 179 9 86 1.40e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005213.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene005213.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene005213.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene005213.t1 AT1G08970 64.344 244 60 9 1 242 1 219 1.67e-86 257
MS.gene005213.t1 AT1G54830 64.655 232 56 4 23 254 12 217 2.70e-86 256
MS.gene005213.t1 AT1G54830 64.655 232 56 4 23 254 12 217 2.70e-86 256
MS.gene005213.t1 AT1G54830 64.655 232 56 4 23 254 12 217 2.70e-86 256
MS.gene005213.t1 AT1G56170 67.785 149 34 3 80 226 55 191 1.70e-66 205
MS.gene005213.t1 AT1G56170 67.785 149 34 3 80 226 55 191 1.70e-66 205
MS.gene005213.t1 AT3G48590 69.863 146 41 3 83 228 47 189 3.01e-64 201
MS.gene005213.t1 AT5G63470 68.456 149 41 3 83 228 60 205 1.65e-61 194
MS.gene005213.t1 AT5G63470 68.456 149 41 3 83 228 60 205 1.65e-61 194
MS.gene005213.t1 AT5G50480 48.276 174 55 7 79 243 35 182 6.17e-44 147
MS.gene005213.t1 AT5G27910 47.794 136 61 3 78 206 16 148 1.11e-35 125
MS.gene005213.t1 AT5G50490 39.106 179 90 6 71 244 9 173 3.02e-32 117
MS.gene005213.t1 AT5G50470 48.148 108 47 2 79 180 44 148 1.17e-28 108
MS.gene005213.t1 AT5G38140 45.000 100 51 2 80 178 48 144 5.00e-26 101

Find 88 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGATATCTTTGATTTCT+TGG 0.152930 1.4:+66923639 MS.gene005213:CDS
CTACCAACAACACCCATATT+TGG 0.174332 1.4:-66923169 None:intergenic
TGGAGTTAACCTTGCGTTCT+TGG 0.214555 1.4:+66923551 MS.gene005213:CDS
TCATGGCCAAAACCCAAATA+TGG 0.254115 1.4:+66923156 MS.gene005213:CDS
AACAACAACTCCAGACCTTT+TGG 0.267438 1.4:+66923371 MS.gene005213:CDS
CAACACCCATATTTGGGTTT+TGG 0.289322 1.4:-66923162 None:intergenic
GTCATTGGGTTTGGCTGGTA+TGG 0.344732 1.4:-66923220 None:intergenic
TACCAACAACACCCATATTT+GGG 0.353196 1.4:-66923168 None:intergenic
ATTGTTGTTGCTCCGGTGGT+TGG 0.362576 1.4:-66923870 None:intergenic
TTGTTGTTGCTCCGGTGGTT+GGG 0.366842 1.4:-66923869 None:intergenic
GGTGACCCAGTCATTGGGTT+TGG 0.375542 1.4:-66923229 None:intergenic
GGGATGGTTGTTCCCTCTGT+TGG 0.377579 1.4:+66923253 MS.gene005213:CDS
GCACAGCAAGCTGGAAATCC+TGG 0.386872 1.4:+66923778 MS.gene005213:CDS
GGATGGTTGTTCCCTCTGTT+GGG 0.395560 1.4:+66923254 MS.gene005213:CDS
ATCCCAGGTGACCCAGTCAT+TGG 0.407383 1.4:-66923235 None:intergenic
TGAGGCGGCATATAGCAATA+AGG 0.408347 1.4:-66923751 None:intergenic
ACCCAGTCATTGGGTTTGGC+TGG 0.417557 1.4:-66923225 None:intergenic
AACCCAATGACTGGGTCACC+TGG 0.422707 1.4:+66923232 MS.gene005213:CDS
GGTGGTTGGGGCCACATTTG+AGG 0.430701 1.4:-66923856 None:intergenic
CACGCCCTTGCAAATACAAC+CGG 0.432250 1.4:-66923514 None:intergenic
CTTGGTTGACATTGTGCCTA+GGG 0.441263 1.4:+66923657 MS.gene005213:CDS
AACCCAAATATGGGTGTTGT+TGG 0.445950 1.4:+66923166 MS.gene005213:CDS
ACTGATTTCCCCAAAAGGTC+TGG 0.448617 1.4:-66923381 None:intergenic
TCCCAGGTGACCCAGTCATT+GGG 0.450412 1.4:-66923234 None:intergenic
CACATTTGAGGTGCCATGTA+TGG 0.456179 1.4:-66923844 None:intergenic
TCAAATGTGGCCCCAACCAC+CGG 0.464006 1.4:+66923858 MS.gene005213:CDS
AGGCGCCGGTTGTATTTGCA+AGG 0.466746 1.4:+66923509 MS.gene005213:CDS
TGTTGTTGGTAGTGGACAAA+TGG 0.476420 1.4:+66923180 MS.gene005213:CDS
TGTTGTTGCTCCGGTGGTTG+GGG 0.477662 1.4:-66923868 None:intergenic
GTTCCATCAGGTTGACCACC+AGG 0.484332 1.4:-66923286 None:intergenic
TCAACCTGATGGAACTCAGC+TGG 0.487041 1.4:+66923294 MS.gene005213:CDS
CCAGCAGGCATCGGTCCTCT+TGG 0.488412 1.4:-66923709 None:intergenic
TTGATACTGATTTCCCCAAA+AGG 0.488519 1.4:-66923386 None:intergenic
CCAAGAGGACCGATGCCTGC+TGG 0.496911 1.4:+66923709 MS.gene005213:CDS
TGTCCCAGCTGAGTTCCATC+AGG 0.498006 1.4:-66923298 None:intergenic
TCTTGGTTGACATTGTGCCT+AGG 0.499762 1.4:+66923656 MS.gene005213:CDS
CCTCAAAATGCACAGCAAGC+TGG 0.503997 1.4:+66923769 MS.gene005213:CDS
ATCACACTGAAGAGAACAAA+AGG 0.504661 1.4:+66923575 MS.gene005213:CDS
TACCAGCCAAACCCAATGAC+TGG 0.504830 1.4:+66923223 MS.gene005213:CDS
GACTGTGGAGCATACATGTT+GGG 0.509025 1.4:-66923817 None:intergenic
GGCGTGTGAAATGTTCATAT+TGG 0.517805 1.4:+66923531 MS.gene005213:CDS
CCATCAGCAGGTCCTCCAGC+AGG 0.525310 1.4:-66923724 None:intergenic
TGGTATGGATTAGAACCGTA+TGG 0.527698 1.4:-66923205 None:intergenic
TCTTGATCCTTGCCAAGGGA+AGG 0.527734 1.4:-66923444 None:intergenic
AATATGGGTGTTGTTGGTAG+TGG 0.529665 1.4:+66923172 MS.gene005213:CDS
TCATCTTTCAAGTCCTCCCT+AGG 0.530171 1.4:-66923673 None:intergenic
CATGGCCAAAACCCAAATAT+GGG 0.534350 1.4:+66923157 MS.gene005213:CDS
GGATTATGCATCATGAGTCC+AGG 0.538672 1.4:-66923796 None:intergenic
CAACCTGATGGAACTCAGCT+GGG 0.543463 1.4:+66923295 MS.gene005213:CDS
CAATAAGGAATTCCATCAGC+AGG 0.543484 1.4:-66923736 None:intergenic
GGCGATTGTTGTTGCTCCGG+TGG 0.545817 1.4:-66923874 None:intergenic
AATCTTCTTGATCCTTGCCA+AGG 0.551207 1.4:-66923449 None:intergenic
GATGATATCAGCTGAGGCGC+CGG 0.551962 1.4:+66923495 MS.gene005213:CDS
CCTGCTGGAGGACCTGCTGA+TGG 0.553104 1.4:+66923724 MS.gene005213:CDS
CAACCTGGTGGTCAACCTGA+TGG 0.553542 1.4:+66923283 MS.gene005213:CDS
GAAGGCGATTGTTGTTGCTC+CGG 0.554014 1.4:-66923877 None:intergenic
ATAAGAATCTAATGATCTGA+AGG 0.560767 1.4:-66923895 None:intergenic
GACATTGCAGCAGCAATCAC+AGG 0.562745 1.4:+66923616 MS.gene005213:CDS
GAAGATTATGAAGGCTGATG+AGG 0.566353 1.4:+66923465 MS.gene005213:CDS
ACCCAATGACTGGGTCACCT+GGG 0.574510 1.4:+66923233 MS.gene005213:CDS
GCAGGTCCTCCAGCAGGCAT+CGG 0.575223 1.4:-66923718 None:intergenic
GGTATGGATTAGAACCGTAT+GGG 0.576207 1.4:-66923204 None:intergenic
GGTTGACATTGTGCCTAGGG+AGG 0.582771 1.4:+66923660 MS.gene005213:CDS
ATCTTCTTGATCCTTGCCAA+GGG 0.584713 1.4:-66923448 None:intergenic
TCCACAGTCTCATCCATACA+TGG 0.588194 1.4:+66923831 MS.gene005213:CDS
TCCTTGCCAAGGGAAGGCTG+TGG 0.591000 1.4:-66923438 None:intergenic
ACCACAGCCTTCCCTTGGCA+AGG 0.592871 1.4:+66923437 MS.gene005213:CDS
GGCGCCGGTTGTATTTGCAA+GGG 0.593275 1.4:+66923510 MS.gene005213:CDS
ACAGAGGGAACAACCATCCC+AGG 0.593577 1.4:-66923250 None:intergenic
AAGGATCAAGAAGATTATGA+AGG 0.595150 1.4:+66923456 MS.gene005213:CDS
AGTGGACAAATGGCCCCATA+CGG 0.596575 1.4:+66923190 MS.gene005213:CDS
AGAATGGATCATCAAGGTCA+TGG 0.604516 1.4:+66923139 None:intergenic
AATGACTGGGTCACCTGGGA+TGG 0.607597 1.4:+66923237 MS.gene005213:CDS
TGAAACAGAATGGATCATCA+AGG 0.611963 1.4:+66923133 None:intergenic
TCTGTTGGGACTATTCAACC+TGG 0.614722 1.4:+66923268 MS.gene005213:CDS
CATACATGGCACCTCAAATG+TGG 0.616231 1.4:+66923845 MS.gene005213:CDS
ACCAGCCAAACCCAATGACT+GGG 0.624633 1.4:+66923224 MS.gene005213:CDS
AGAGGACCGATGCCTGCTGG+AGG 0.625695 1.4:+66923712 MS.gene005213:CDS
TCAGTATCAAGAAATTGAGA+AGG 0.629465 1.4:+66923399 MS.gene005213:CDS
AGTGTGATTCCAAGAACGCA+AGG 0.629484 1.4:-66923560 None:intergenic
GGTTGAATAGTCCCAACAGA+GGG 0.660370 1.4:-66923265 None:intergenic
TGTGAAGATGATATCAGCTG+AGG 0.675937 1.4:+66923489 MS.gene005213:CDS
GAAGTGCTTGCATTACCAAG+AGG 0.676504 1.4:+66923694 MS.gene005213:CDS
GTTGGGACTATTCAACCTGG+TGG 0.686021 1.4:+66923271 MS.gene005213:CDS
AGACTGTGGAGCATACATGT+TGG 0.689302 1.4:-66923818 None:intergenic
GTATGGATTAGAACCGTATG+GGG 0.698616 1.4:-66923203 None:intergenic
GCCATGTATGGATGAGACTG+TGG 0.701999 1.4:-66923832 None:intergenic
AGGTTGAATAGTCCCAACAG+AGG 0.742829 1.4:-66923266 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTGATATCTTTGATTTCT+TGG + chr1.4:66923639-66923658 MS.gene005213:CDS 25.0%
AAGGATCAAGAAGATTATGA+AGG + chr1.4:66923456-66923475 MS.gene005213:CDS 30.0%
TCAGTATCAAGAAATTGAGA+AGG + chr1.4:66923399-66923418 MS.gene005213:CDS 30.0%
! TGCAATGTCATTCTTTTGAA+GGG - chr1.4:66923605-66923624 None:intergenic 30.0%
ATCACACTGAAGAGAACAAA+AGG + chr1.4:66923575-66923594 MS.gene005213:CDS 35.0%
TACCAACAACACCCATATTT+GGG - chr1.4:66923171-66923190 None:intergenic 35.0%
! CTGCAATGTCATTCTTTTGA+AGG - chr1.4:66923606-66923625 None:intergenic 35.0%
!! TTGATACTGATTTCCCCAAA+AGG - chr1.4:66923389-66923408 None:intergenic 35.0%
AATCTTCTTGATCCTTGCCA+AGG - chr1.4:66923452-66923471 None:intergenic 40.0%
ATCTTCTTGATCCTTGCCAA+GGG - chr1.4:66923451-66923470 None:intergenic 40.0%
CAATAAGGAATTCCATCAGC+AGG - chr1.4:66923739-66923758 None:intergenic 40.0%
CATGGCCAAAACCCAAATAT+GGG + chr1.4:66923157-66923176 MS.gene005213:CDS 40.0%
CTACCAACAACACCCATATT+TGG - chr1.4:66923172-66923191 None:intergenic 40.0%
GAAGATTATGAAGGCTGATG+AGG + chr1.4:66923465-66923484 MS.gene005213:CDS 40.0%
GGCGTGTGAAATGTTCATAT+TGG + chr1.4:66923531-66923550 MS.gene005213:CDS 40.0%
TCATGGCCAAAACCCAAATA+TGG + chr1.4:66923156-66923175 MS.gene005213:CDS 40.0%
TGTGAAGATGATATCAGCTG+AGG + chr1.4:66923489-66923508 MS.gene005213:CDS 40.0%
! AACAACAACTCCAGACCTTT+TGG + chr1.4:66923371-66923390 MS.gene005213:CDS 40.0%
! AACCCAAATATGGGTGTTGT+TGG + chr1.4:66923166-66923185 MS.gene005213:CDS 40.0%
! ACAACAACTCCAGACCTTTT+GGG + chr1.4:66923372-66923391 MS.gene005213:CDS 40.0%
!! AATATGGGTGTTGTTGGTAG+TGG + chr1.4:66923172-66923191 MS.gene005213:CDS 40.0%
!! CAACACCCATATTTGGGTTT+TGG - chr1.4:66923165-66923184 None:intergenic 40.0%
!! GGTATGGATTAGAACCGTAT+GGG - chr1.4:66923207-66923226 None:intergenic 40.0%
!! GTATGGATTAGAACCGTATG+GGG - chr1.4:66923206-66923225 None:intergenic 40.0%
!! TGGTATGGATTAGAACCGTA+TGG - chr1.4:66923208-66923227 None:intergenic 40.0%
!! TGTTGTTGGTAGTGGACAAA+TGG + chr1.4:66923180-66923199 MS.gene005213:CDS 40.0%
AGACTGTGGAGCATACATGT+TGG - chr1.4:66923821-66923840 None:intergenic 45.0%
AGGTTGAATAGTCCCAACAG+AGG - chr1.4:66923269-66923288 None:intergenic 45.0%
AGTGTGATTCCAAGAACGCA+AGG - chr1.4:66923563-66923582 None:intergenic 45.0%
CATACATGGCACCTCAAATG+TGG + chr1.4:66923845-66923864 MS.gene005213:CDS 45.0%
CTTGGTTGACATTGTGCCTA+GGG + chr1.4:66923657-66923676 MS.gene005213:CDS 45.0%
GACTGTGGAGCATACATGTT+GGG - chr1.4:66923820-66923839 None:intergenic 45.0%
GGATTATGCATCATGAGTCC+AGG - chr1.4:66923799-66923818 None:intergenic 45.0%
GGTTGAATAGTCCCAACAGA+GGG - chr1.4:66923268-66923287 None:intergenic 45.0%
TCCACAGTCTCATCCATACA+TGG + chr1.4:66923831-66923850 MS.gene005213:CDS 45.0%
TCTGTTGGGACTATTCAACC+TGG + chr1.4:66923268-66923287 MS.gene005213:CDS 45.0%
TCTTGGTTGACATTGTGCCT+AGG + chr1.4:66923656-66923675 MS.gene005213:CDS 45.0%
TGAGGCGGCATATAGCAATA+AGG - chr1.4:66923754-66923773 None:intergenic 45.0%
TGGAGTTAACCTTGCGTTCT+TGG + chr1.4:66923551-66923570 MS.gene005213:CDS 45.0%
! ACTGATTTCCCCAAAAGGTC+TGG - chr1.4:66923384-66923403 None:intergenic 45.0%
! CAACAACTCCAGACCTTTTG+GGG + chr1.4:66923373-66923392 MS.gene005213:CDS 45.0%
! CACATTTGAGGTGCCATGTA+TGG - chr1.4:66923847-66923866 None:intergenic 45.0%
! GAAGTGCTTGCATTACCAAG+AGG + chr1.4:66923694-66923713 MS.gene005213:CDS 45.0%
! TCATCTTTCAAGTCCTCCCT+AGG - chr1.4:66923676-66923695 None:intergenic 45.0%
ACCAGCCAAACCCAATGACT+GGG + chr1.4:66923224-66923243 MS.gene005213:CDS 50.0%
AGTGGACAAATGGCCCCATA+CGG + chr1.4:66923190-66923209 MS.gene005213:CDS 50.0%
CAAAAACCACAGCCTTCCCT+TGG + chr1.4:66923432-66923451 MS.gene005213:CDS 50.0%
CAACCTGATGGAACTCAGCT+GGG + chr1.4:66923295-66923314 MS.gene005213:CDS 50.0%
CACGCCCTTGCAAATACAAC+CGG - chr1.4:66923517-66923536 None:intergenic 50.0%
CCTCAAAATGCACAGCAAGC+TGG + chr1.4:66923769-66923788 MS.gene005213:CDS 50.0%
GACATTGCAGCAGCAATCAC+AGG + chr1.4:66923616-66923635 MS.gene005213:CDS 50.0%
GCCATGTATGGATGAGACTG+TGG - chr1.4:66923835-66923854 None:intergenic 50.0%
GGATGGTTGTTCCCTCTGTT+GGG + chr1.4:66923254-66923273 MS.gene005213:CDS 50.0%
GTCATTGGGTTTGGCTGGTA+TGG - chr1.4:66923223-66923242 None:intergenic 50.0%
GTTGGGACTATTCAACCTGG+TGG + chr1.4:66923271-66923290 MS.gene005213:CDS 50.0%
TACCAGCCAAACCCAATGAC+TGG + chr1.4:66923223-66923242 MS.gene005213:CDS 50.0%
TCAACCTGATGGAACTCAGC+TGG + chr1.4:66923294-66923313 MS.gene005213:CDS 50.0%
TCTTGATCCTTGCCAAGGGA+AGG - chr1.4:66923447-66923466 None:intergenic 50.0%
! ATTGTTGTTGCTCCGGTGGT+TGG - chr1.4:66923873-66923892 None:intergenic 50.0%
! GAAGGCGATTGTTGTTGCTC+CGG - chr1.4:66923880-66923899 None:intergenic 50.0%
! TTGTTGTTGCTCCGGTGGTT+GGG - chr1.4:66923872-66923891 None:intergenic 50.0%
!!! CCAGCTTGCTGTGCATTTTG+AGG - chr1.4:66923772-66923791 None:intergenic 50.0%
!!! GCTTGCTGTGCATTTTGAGG+CGG - chr1.4:66923769-66923788 None:intergenic 50.0%
AACCCAATGACTGGGTCACC+TGG + chr1.4:66923232-66923251 MS.gene005213:CDS 55.0%
AATGACTGGGTCACCTGGGA+TGG + chr1.4:66923237-66923256 MS.gene005213:CDS 55.0%
ACAGAGGGAACAACCATCCC+AGG - chr1.4:66923253-66923272 None:intergenic 55.0%
ACCCAATGACTGGGTCACCT+GGG + chr1.4:66923233-66923252 MS.gene005213:CDS 55.0%
ACCCAGTCATTGGGTTTGGC+TGG - chr1.4:66923228-66923247 None:intergenic 55.0%
ATCCCAGGTGACCCAGTCAT+TGG - chr1.4:66923238-66923257 None:intergenic 55.0%
CAACCTGGTGGTCAACCTGA+TGG + chr1.4:66923283-66923302 MS.gene005213:CDS 55.0%
GATGATATCAGCTGAGGCGC+CGG + chr1.4:66923495-66923514 MS.gene005213:CDS 55.0%
GCACAGCAAGCTGGAAATCC+TGG + chr1.4:66923778-66923797 MS.gene005213:CDS 55.0%
GGGATGGTTGTTCCCTCTGT+TGG + chr1.4:66923253-66923272 MS.gene005213:CDS 55.0%
GGTGACCCAGTCATTGGGTT+TGG - chr1.4:66923232-66923251 None:intergenic 55.0%
GGTTGACATTGTGCCTAGGG+AGG + chr1.4:66923660-66923679 MS.gene005213:CDS 55.0%
TCAAATGTGGCCCCAACCAC+CGG + chr1.4:66923858-66923877 MS.gene005213:CDS 55.0%
TCCCAGGTGACCCAGTCATT+GGG - chr1.4:66923237-66923256 None:intergenic 55.0%
TGTCCCAGCTGAGTTCCATC+AGG - chr1.4:66923301-66923320 None:intergenic 55.0%
TGTTGTTGCTCCGGTGGTTG+GGG - chr1.4:66923871-66923890 None:intergenic 55.0%
!! AGGCGCCGGTTGTATTTGCA+AGG + chr1.4:66923509-66923528 MS.gene005213:CDS 55.0%
!! GGCGCCGGTTGTATTTGCAA+GGG + chr1.4:66923510-66923529 MS.gene005213:CDS 55.0%
!! GTTCCATCAGGTTGACCACC+AGG - chr1.4:66923289-66923308 None:intergenic 55.0%
ACCACAGCCTTCCCTTGGCA+AGG + chr1.4:66923437-66923456 MS.gene005213:CDS 60.0%
GGTGGTTGGGGCCACATTTG+AGG - chr1.4:66923859-66923878 None:intergenic 60.0%
TCCTTGCCAAGGGAAGGCTG+TGG - chr1.4:66923441-66923460 None:intergenic 60.0%
! GGCGATTGTTGTTGCTCCGG+TGG - chr1.4:66923877-66923896 None:intergenic 60.0%
AGAGGACCGATGCCTGCTGG+AGG + chr1.4:66923712-66923731 MS.gene005213:CDS 65.0%
CCAAGAGGACCGATGCCTGC+TGG + chr1.4:66923709-66923728 MS.gene005213:CDS 65.0%
CCATCAGCAGGTCCTCCAGC+AGG - chr1.4:66923727-66923746 None:intergenic 65.0%
CCTGCTGGAGGACCTGCTGA+TGG + chr1.4:66923724-66923743 MS.gene005213:CDS 65.0%
GCAGGTCCTCCAGCAGGCAT+CGG - chr1.4:66923721-66923740 None:intergenic 65.0%
!! CCAGCAGGCATCGGTCCTCT+TGG - chr1.4:66923712-66923731 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 66923142 66923909 66923142 ID=MS.gene005213
chr1.4 mRNA 66923142 66923909 66923142 ID=MS.gene005213.t1;Parent=MS.gene005213
chr1.4 exon 66923142 66923909 66923142 ID=MS.gene005213.t1.exon1;Parent=MS.gene005213.t1
chr1.4 CDS 66923142 66923909 66923142 ID=cds.MS.gene005213.t1;Parent=MS.gene005213.t1
Gene Sequence

>MS.gene005213

ATGGATCATCAAGGTCATGGCCAAAACCCAAATATGGGTGTTGTTGGTAGTGGACAAATGGCCCCATACGGTTCTAATCCATACCAGCCAAACCCAATGACTGGGTCACCTGGGATGGTTGTTCCCTCTGTTGGGACTATTCAACCTGGTGGTCAACCTGATGGAACTCAGCTGGGACAACATCAGCTTGCTTATCAGCACATTCATCAGCAGCAACAGCAGCAGCAACAACAACAACTCCAGACCTTTTGGGGAAATCAGTATCAAGAAATTGAGAAGGTAACTGATTTCAAAAACCACAGCCTTCCCTTGGCAAGGATCAAGAAGATTATGAAGGCTGATGAGGATGTGAAGATGATATCAGCTGAGGCGCCGGTTGTATTTGCAAGGGCGTGTGAAATGTTCATATTGGAGTTAACCTTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGCGAACCCTTCAAAAGAATGACATTGCAGCAGCAATCACAGGAACTGATATCTTTGATTTCTTGGTTGACATTGTGCCTAGGGAGGACTTGAAAGATGAAGTGCTTGCATTACCAAGAGGACCGATGCCTGCTGGAGGACCTGCTGATGGAATTCCTTATTGCTATATGCCGCCTCAAAATGCACAGCAAGCTGGAAATCCTGGACTCATGATGCATAATCCCAACATGTATGCTCCACAGTCTCATCCATACATGGCACCTCAAATGTGGCCCCAACCACCGGAGCAACAACAATCGCCTTCAGATCATTAG
Protein sequence

>MS.gene005213.t1

MDHQGHGQNPNMGVVGSGQMAPYGSNPYQPNPMTGSPGMVVPSVGTIQPGGQPDGTQLGQHQLAYQHIHQQQQQQQQQQLQTFWGNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVKMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITGTDIFDFLVDIVPREDLKDEVLALPRGPMPAGGPADGIPYCYMPPQNAQQAGNPGLMMHNPNMYAPQSHPYMAPQMWPQPPEQQQSPSDH