Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005316.t1 | AES61472.2 | 97.4 | 268 | 6 | 1 | 1 | 267 | 1 | 268 | 7.90E-150 | 539.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005316.t1 | A2Y007 | 60.9 | 258 | 89 | 4 | 12 | 265 | 50 | 299 | 4.6e-82 | 305.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005316.t1 | A0A072VNV2 | 97.4 | 268 | 6 | 1 | 1 | 267 | 1 | 268 | 5.7e-150 | 539.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene005316.t1 | TF | HB-KNOX |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005316.t1 | MTR_1g084060 | 97.388 | 268 | 6 | 1 | 1 | 267 | 1 | 268 | 0.0 | 544 |
MS.gene005316.t1 | MTR_1g084060 | 97.388 | 268 | 6 | 1 | 1 | 267 | 1 | 268 | 0.0 | 543 |
MS.gene005316.t1 | MTR_5g033720 | 53.307 | 257 | 104 | 4 | 9 | 259 | 63 | 309 | 1.25e-83 | 253 |
MS.gene005316.t1 | MTR_1g017080 | 48.221 | 253 | 116 | 4 | 18 | 264 | 119 | 362 | 5.27e-70 | 220 |
MS.gene005316.t1 | MTR_5g085860 | 49.398 | 249 | 101 | 4 | 19 | 259 | 47 | 278 | 5.78e-68 | 213 |
MS.gene005316.t1 | MTR_2g024390 | 51.020 | 245 | 102 | 5 | 18 | 256 | 117 | 349 | 6.90e-66 | 209 |
MS.gene005316.t1 | MTR_3g106400 | 35.249 | 261 | 122 | 8 | 19 | 244 | 107 | 355 | 1.61e-37 | 135 |
MS.gene005316.t1 | MTR_3g106400 | 35.249 | 261 | 122 | 8 | 19 | 244 | 107 | 355 | 2.04e-37 | 135 |
MS.gene005316.t1 | MTR_1g012960 | 34.538 | 249 | 138 | 6 | 19 | 244 | 174 | 420 | 4.38e-37 | 136 |
MS.gene005316.t1 | MTR_3g106400 | 35.249 | 261 | 122 | 8 | 19 | 244 | 107 | 355 | 4.76e-37 | 135 |
MS.gene005316.t1 | MTR_5g011070 | 33.597 | 253 | 145 | 4 | 15 | 244 | 24 | 276 | 1.99e-36 | 131 |
MS.gene005316.t1 | MTR_4g116545 | 33.065 | 248 | 147 | 4 | 16 | 244 | 68 | 315 | 2.38e-36 | 132 |
MS.gene005316.t1 | MTR_4g116545 | 33.065 | 248 | 147 | 4 | 16 | 244 | 68 | 315 | 2.50e-36 | 132 |
MS.gene005316.t1 | MTR_2g461240 | 33.871 | 248 | 139 | 6 | 19 | 244 | 95 | 339 | 4.58e-35 | 129 |
MS.gene005316.t1 | MTR_6g071190 | 34.906 | 106 | 67 | 1 | 15 | 120 | 39 | 142 | 7.51e-13 | 65.1 |
MS.gene005316.t1 | MTR_7g065050 | 38.356 | 73 | 43 | 1 | 174 | 246 | 296 | 366 | 6.05e-11 | 62.8 |
MS.gene005316.t1 | MTR_4g019450 | 42.466 | 73 | 39 | 2 | 174 | 246 | 352 | 421 | 7.16e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005316.t1 | AT1G23380 | 51.190 | 252 | 103 | 5 | 17 | 261 | 84 | 322 | 3.32e-82 | 250 |
MS.gene005316.t1 | AT1G70510 | 50.201 | 249 | 110 | 3 | 17 | 261 | 68 | 306 | 8.99e-81 | 246 |
MS.gene005316.t1 | AT1G23380 | 50.787 | 254 | 103 | 6 | 17 | 261 | 84 | 324 | 2.96e-80 | 245 |
MS.gene005316.t1 | AT1G70510 | 49.407 | 253 | 110 | 4 | 17 | 261 | 68 | 310 | 2.09e-78 | 240 |
MS.gene005316.t1 | AT1G62360 | 50.202 | 247 | 107 | 4 | 18 | 258 | 121 | 357 | 1.11e-68 | 217 |
MS.gene005316.t1 | AT4G08150 | 47.177 | 248 | 117 | 5 | 18 | 258 | 134 | 374 | 3.03e-66 | 211 |
MS.gene005316.t1 | AT1G62990 | 34.661 | 251 | 142 | 6 | 15 | 244 | 26 | 275 | 1.88e-39 | 139 |
MS.gene005316.t1 | AT5G25220 | 34.800 | 250 | 133 | 6 | 19 | 244 | 160 | 403 | 5.57e-38 | 138 |
MS.gene005316.t1 | AT5G25220 | 34.800 | 250 | 133 | 6 | 19 | 244 | 160 | 403 | 7.43e-38 | 138 |
MS.gene005316.t1 | AT5G11060 | 35.484 | 248 | 134 | 7 | 19 | 244 | 124 | 367 | 4.66e-37 | 135 |
MS.gene005316.t1 | AT4G32040 | 33.740 | 246 | 141 | 5 | 19 | 244 | 119 | 362 | 2.37e-36 | 133 |
MS.gene005316.t1 | AT4G32040 | 33.740 | 246 | 141 | 5 | 19 | 244 | 119 | 362 | 2.98e-36 | 133 |
MS.gene005316.t1 | AT1G75430 | 49.091 | 55 | 28 | 0 | 192 | 246 | 209 | 263 | 4.99e-11 | 62.4 |
MS.gene005316.t1 | AT5G02030 | 46.667 | 60 | 32 | 0 | 187 | 246 | 350 | 409 | 8.94e-11 | 62.4 |
Find 60 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTTCTCTTCTTGAAGAAAT+AGG | 0.173162 | 1.1:-62326303 | MS.gene005316:CDS |
GAAATGCTCCTTCGTAAGTA+TGG | 0.209222 | 1.1:-62321438 | MS.gene005316:CDS |
TCTCACGGAAAGCATTATTT+TGG | 0.227729 | 1.1:+62326268 | None:intergenic |
ATTTCTCAAGAAAAGGAAAA+AGG | 0.267954 | 1.1:-62321388 | MS.gene005316:CDS |
CTTCTCTTCTTGAAGAAATA+GGG | 0.308161 | 1.1:-62326302 | MS.gene005316:CDS |
ACAACCAATCGGATCTAATA+AGG | 0.325364 | 1.1:-62326654 | MS.gene005316:CDS |
ATATAAAGCAGATAAATAAT+TGG | 0.326164 | 1.1:-62320714 | MS.gene005316:CDS |
TGTTGCTTCATTGAAGGGCT+TGG | 0.378477 | 1.1:+62326007 | None:intergenic |
TTTACCTGAACGGTTGTAAT+CGG | 0.379472 | 1.1:+62325920 | None:intergenic |
AATAATGCTTTCCGTGAGAT+AGG | 0.392343 | 1.1:-62326264 | MS.gene005316:CDS |
GATAGTAGATTTGGATAAAG+AGG | 0.394577 | 1.1:+62326586 | None:intergenic |
TCCTGACCTTGACCACTTCA+TGG | 0.397547 | 1.1:-62326235 | MS.gene005316:intron |
AAATAATGTTGCTTCATTGA+AGG | 0.405931 | 1.1:+62326001 | None:intergenic |
GACAGGAATTTCTCAAGAAA+AGG | 0.410633 | 1.1:-62321395 | MS.gene005316:CDS |
ATTTGAATTACCGTGGGATA+AGG | 0.413318 | 1.1:+62321303 | None:intergenic |
AATAATGTTGCTTCATTGAA+GGG | 0.423656 | 1.1:+62326002 | None:intergenic |
GGATGCAAGAAAAGCATTGA+TGG | 0.424199 | 1.1:-62321352 | MS.gene005316:CDS |
TCTTCCGATTACAACCGTTC+AGG | 0.433728 | 1.1:-62325924 | MS.gene005316:intron |
GGAAAGGTTGAAGCAGTAGA+AGG | 0.448898 | 1.1:-62321513 | MS.gene005316:CDS |
ATTGGTGGAACGTCCACTAT+AGG | 0.452627 | 1.1:-62321329 | MS.gene005316:CDS |
GTGTCAGATCATGAGGCAGC+AGG | 0.474004 | 1.1:-62321561 | MS.gene005316:intron |
TTACAGAGGTCCTGCTATGC+TGG | 0.477108 | 1.1:+62320615 | None:intergenic |
ACCATGAAGTGGTCAAGGTC+AGG | 0.484448 | 1.1:+62326234 | None:intergenic |
TGGGATAAGGCCACCTATAG+TGG | 0.485346 | 1.1:+62321316 | None:intergenic |
AAATGCTCCTTCGTAAGTAT+GGG | 0.496084 | 1.1:-62321437 | MS.gene005316:CDS |
ATTCCTGTCTTAAGTTGCTA+AGG | 0.503658 | 1.1:+62321409 | None:intergenic |
CAAGAAAAGCATTGATGGAT+TGG | 0.506407 | 1.1:-62321347 | MS.gene005316:CDS |
AAAGAGGGTGAGTTGCGATC+TGG | 0.510035 | 1.1:+62326602 | None:intergenic |
GTAAGTAGCACCAGCATAGC+AGG | 0.513299 | 1.1:-62320625 | MS.gene005316:CDS |
TCTAATAAGGTTGGATATGA+CGG | 0.529171 | 1.1:-62326641 | MS.gene005316:CDS |
AGAAGAGAAGCAAGTTCTGT+TGG | 0.544757 | 1.1:+62326315 | None:intergenic |
ATAGTAGATTTGGATAAAGA+GGG | 0.546531 | 1.1:+62326587 | None:intergenic |
CCAATCGGATCTAATAAGGT+TGG | 0.547810 | 1.1:-62326650 | MS.gene005316:CDS |
TCTTTAAGCTCTTTATCACC+TGG | 0.551142 | 1.1:+62321459 | None:intergenic |
CCAACCTTATTAGATCCGAT+TGG | 0.554336 | 1.1:+62326650 | None:intergenic |
GAAAAGCATTGATGGATTGG+TGG | 0.555034 | 1.1:-62321344 | MS.gene005316:CDS |
TTACCTTAGCAACTTAAGAC+AGG | 0.555596 | 1.1:-62321412 | MS.gene005316:CDS |
ACAACTAAACGAACTTTGCA+AGG | 0.560050 | 1.1:-62325961 | MS.gene005316:CDS |
GAAAATCTCATATCTTCAGA+TGG | 0.560173 | 1.1:+62320661 | None:intergenic |
TCACATGGAACACAACCAAT+CGG | 0.562048 | 1.1:-62326665 | None:intergenic |
CTGCAGCTGTCAGATATGAC+TGG | 0.564508 | 1.1:-62320742 | MS.gene005316:CDS |
TTAAGTTCTCTTTACCTGAA+CGG | 0.565840 | 1.1:+62325910 | None:intergenic |
TCAGAGGATGAAATGAGTTG+TGG | 0.568316 | 1.1:-62321534 | MS.gene005316:CDS |
AATATACCATGAAGTGGTCA+AGG | 0.574865 | 1.1:+62326229 | None:intergenic |
TAAAAGAATATACCATGAAG+TGG | 0.580028 | 1.1:+62326223 | None:intergenic |
TCAATCAGAGGAAAAGACAC+TGG | 0.584588 | 1.1:-62320687 | MS.gene005316:CDS |
CAGGATCATCTCCTATCTCA+CGG | 0.597806 | 1.1:+62326253 | None:intergenic |
TGTCAGATCATGAGGCAGCA+GGG | 0.613094 | 1.1:-62321560 | MS.gene005316:intron |
AATGCTCCTTCGTAAGTATG+GGG | 0.615416 | 1.1:-62321436 | MS.gene005316:CDS |
CTATAGGTGGCCTTATCCCA+CGG | 0.616947 | 1.1:-62321313 | MS.gene005316:intron |
CAACTAAACGAACTTTGCAA+GGG | 0.626350 | 1.1:-62325960 | MS.gene005316:CDS |
AACTAAACGAACTTTGCAAG+GGG | 0.629556 | 1.1:-62325959 | MS.gene005316:CDS |
ATAATTGGTTCATCAATCAG+AGG | 0.632866 | 1.1:-62320699 | MS.gene005316:CDS |
AGTTCTTCATAGATACAAAG+AGG | 0.649236 | 1.1:-62326036 | MS.gene005316:CDS |
GGTGGAACGTCCACTATAGG+TGG | 0.655633 | 1.1:-62321326 | MS.gene005316:CDS |
GGATGAAATGAGTTGTGGAA+AGG | 0.661174 | 1.1:-62321529 | MS.gene005316:CDS |
TGAGGCAGCAGGGACATCAG+AGG | 0.661669 | 1.1:-62321550 | MS.gene005316:CDS |
AAGGTTGAAGCAGTAGAAGG+TGG | 0.681013 | 1.1:-62321510 | MS.gene005316:CDS |
ATGCTCCTTCGTAAGTATGG+GGG | 0.702025 | 1.1:-62321435 | MS.gene005316:CDS |
CCTGCAGAATAAATTTACAG+AGG | 0.707916 | 1.1:+62320601 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATAATTTATATATTAA+AGG | + | chr1.1:62322196-62322215 | None:intergenic | 0.0% |
!! | TTAATATATAAATTATATAT+AGG | - | chr1.1:62322196-62322215 | MS.gene005316:intron | 0.0% |
!! | AAAAAAAAAAATTTGTACAA+TGG | + | chr1.1:62324214-62324233 | None:intergenic | 10.0% |
!! | AAAAAAATATAGTAGAAAAT+TGG | + | chr1.1:62321100-62321119 | None:intergenic | 10.0% |
!! | AAATATATATGATGAATTAA+AGG | + | chr1.1:62320758-62320777 | None:intergenic | 10.0% |
!! | CTATACATTAAATAAAAATT+TGG | - | chr1.1:62323637-62323656 | MS.gene005316:intron | 10.0% |
!! | TAGTTATTAAAATTTATTTG+AGG | - | chr1.1:62323841-62323860 | MS.gene005316:intron | 10.0% |
!! | TATAAAATGAATTTGAATTT+CGG | - | chr1.1:62322974-62322993 | MS.gene005316:intron | 10.0% |
!! | TATTAAAAAAAATTATGTTG+TGG | - | chr1.1:62325631-62325650 | MS.gene005316:intron | 10.0% |
!!! | AATTTTAATAACTACATTTT+TGG | + | chr1.1:62323835-62323854 | None:intergenic | 10.0% |
!!! | ATAGGTAAATTATAAAATTT+TGG | - | chr1.1:62322214-62322233 | MS.gene005316:intron | 10.0% |
!!! | TTTTTTTTTTTTTAAAAAGC+CGG | + | chr1.1:62322872-62322891 | None:intergenic | 10.0% |
!! | AAAAATATCCAGATATTTAA+AGG | + | chr1.1:62321407-62321426 | None:intergenic | 15.0% |
!! | AAATTAACAAAAAATACACA+AGG | - | chr1.1:62321745-62321764 | MS.gene005316:intron | 15.0% |
!! | AACATAAATATAAATCGTTT+AGG | - | chr1.1:62322325-62322344 | MS.gene005316:intron | 15.0% |
!! | ATATAAAGCAGATAAATAAT+TGG | - | chr1.1:62326562-62326581 | MS.gene005316:intron | 15.0% |
!! | ATTAAAATCCATATTATTGT+CGG | + | chr1.1:62322949-62322968 | None:intergenic | 15.0% |
!! | ATTACATTAATTAAATCAGA+TGG | - | chr1.1:62321120-62321139 | MS.gene005316:intron | 15.0% |
!! | TTCATGTCAATATATTAAAA+TGG | + | chr1.1:62325418-62325437 | None:intergenic | 15.0% |
!! | TTGATTATATATCTGATAAA+AGG | - | chr1.1:62326273-62326292 | MS.gene005316:CDS | 15.0% |
!!! | AAATTAAAGTTTAGTTTTGT+TGG | - | chr1.1:62323443-62323462 | MS.gene005316:intron | 15.0% |
!!! | AACATTTAATTTATTACACT+TGG | - | chr1.1:62321196-62321215 | MS.gene005316:intron | 15.0% |
!!! | AATTAAAGTTTAGTTTTGTT+GGG | - | chr1.1:62323444-62323463 | MS.gene005316:intron | 15.0% |
!!! | ATATAGAATAAAAAACCTTT+TGG | + | chr1.1:62320731-62320750 | None:intergenic | 15.0% |
!!! | TATAATTTGATGAATTTTTC+AGG | - | chr1.1:62326500-62326519 | MS.gene005316:intron | 15.0% |
!!! | TTTAAATGTTCTTTTTGTAT+AGG | + | chr1.1:62323498-62323517 | None:intergenic | 15.0% |
!! | ACTAATAATAAAATGTTGGA+GGG | - | chr1.1:62325387-62325406 | MS.gene005316:intron | 20.0% |
!! | ATAAAGCCAAAAAACATTTA+GGG | + | chr1.1:62322535-62322554 | None:intergenic | 20.0% |
!! | ATATTTGCATTCATCTAATA+TGG | - | chr1.1:62323091-62323110 | MS.gene005316:intron | 20.0% |
!! | ATTAATTAAATCAGATGGAA+TGG | - | chr1.1:62321125-62321144 | MS.gene005316:intron | 20.0% |
!! | ATTGAATTTCTATAAAACAG+TGG | - | chr1.1:62325136-62325155 | MS.gene005316:intron | 20.0% |
!! | ATTTAATTCAGATACTTTGT+GGG | + | chr1.1:62324617-62324636 | None:intergenic | 20.0% |
!! | CTAATTATGTACGATAATAA+TGG | - | chr1.1:62321542-62321561 | MS.gene005316:CDS | 20.0% |
!! | CTACAATTAGAATAATGATA+TGG | - | chr1.1:62322033-62322052 | MS.gene005316:intron | 20.0% |
!! | TATATATGATGAATTAAAGG+AGG | + | chr1.1:62320755-62320774 | None:intergenic | 20.0% |
!! | TATTATCGTACATAATTAGA+GGG | + | chr1.1:62321541-62321560 | None:intergenic | 20.0% |
!! | TATTTAATTCAGATACTTTG+TGG | + | chr1.1:62324618-62324637 | None:intergenic | 20.0% |
!! | TCATCAAATTATAATCTATC+AGG | + | chr1.1:62326493-62326512 | None:intergenic | 20.0% |
!! | TCCAATATAAAAACTTAACT+TGG | - | chr1.1:62323726-62323745 | MS.gene005316:intron | 20.0% |
!! | TCTCACTAATAATAAAATGT+TGG | - | chr1.1:62325383-62325402 | MS.gene005316:intron | 20.0% |
!! | TTATTATCGTACATAATTAG+AGG | + | chr1.1:62321542-62321561 | None:intergenic | 20.0% |
!!! | AAATTTATTTGAGGTTTGAT+AGG | - | chr1.1:62323850-62323869 | MS.gene005316:intron | 20.0% |
!!! | AATTTATTTGAGGTTTGATA+GGG | - | chr1.1:62323851-62323870 | MS.gene005316:intron | 20.0% |
!!! | ACGCGAAAATTTTAAAATTT+AGG | + | chr1.1:62324926-62324945 | None:intergenic | 20.0% |
!!! | AGATATGAGATTTTCTATTA+TGG | - | chr1.1:62326623-62326642 | MS.gene005316:CDS | 20.0% |
!!! | ATATTTTTCACTCAATCATA+CGG | - | chr1.1:62320772-62320791 | MS.gene005316:intron | 20.0% |
!!! | GGTTTTAATATCAAATTGAT+TGG | - | chr1.1:62323955-62323974 | MS.gene005316:intron | 20.0% |
!!! | GTTAAACAAATTTTTGCTAT+GGG | + | chr1.1:62323005-62323024 | None:intergenic | 20.0% |
!!! | GTTTTACACAATAACATATA+TGG | - | chr1.1:62321932-62321951 | MS.gene005316:intron | 20.0% |
!!! | TGTTAAACAAATTTTTGCTA+TGG | + | chr1.1:62323006-62323025 | None:intergenic | 20.0% |
!!! | TGTTATTTGGATTATTTGTA+AGG | - | chr1.1:62322554-62322573 | MS.gene005316:intron | 20.0% |
!!! | TGTTTTTCAATGAAGATTAT+TGG | - | chr1.1:62323136-62323155 | MS.gene005316:intron | 20.0% |
!!! | TTGTACTAATTAAGTTGATA+TGG | - | chr1.1:62325580-62325599 | MS.gene005316:intron | 20.0% |
!!! | TTTCTTTGTCAAACTTTTTT+CGG | - | chr1.1:62322795-62322814 | MS.gene005316:intron | 20.0% |
!!! | TTTTTTGGCTTTATGTTATT+TGG | - | chr1.1:62322541-62322560 | MS.gene005316:intron | 20.0% |
! | AAAAAAGCAGATAGTAGATT+TGG | + | chr1.1:62320702-62320721 | None:intergenic | 25.0% |
! | AAAAATTTGTACAATGGAGA+CGG | + | chr1.1:62324208-62324227 | None:intergenic | 25.0% |
! | AACTGTAGTAAACAGAAAAT+AGG | + | chr1.1:62322722-62322741 | None:intergenic | 25.0% |
! | AAGTTAATTGTTGGAATTGT+TGG | - | chr1.1:62325356-62325375 | MS.gene005316:intron | 25.0% |
! | AATTTGAATTTGAATTACCG+TGG | + | chr1.1:62325983-62326002 | None:intergenic | 25.0% |
! | ACAACACATAAAATTTACCT+TGG | + | chr1.1:62325257-62325276 | None:intergenic | 25.0% |
! | AGATGAATGCAAATATACAA+TGG | + | chr1.1:62323087-62323106 | None:intergenic | 25.0% |
! | ATACTATATATTGTGCATGA+AGG | - | chr1.1:62320930-62320949 | MS.gene005316:intron | 25.0% |
! | ATAGTAGATTTGGATAAAGA+GGG | + | chr1.1:62320692-62320711 | None:intergenic | 25.0% |
! | ATATAGTAGAAAATTGGACT+TGG | + | chr1.1:62321094-62321113 | None:intergenic | 25.0% |
! | ATTAATTACATCCACAATTG+AGG | - | chr1.1:62322008-62322027 | MS.gene005316:intron | 25.0% |
! | ATTTCTCAAGAAAAGGAAAA+AGG | - | chr1.1:62325888-62325907 | MS.gene005316:intron | 25.0% |
! | ATTTGAATTTGAATTACCGT+GGG | + | chr1.1:62325982-62326001 | None:intergenic | 25.0% |
! | CACTAATAATAAAATGTTGG+AGG | - | chr1.1:62325386-62325405 | MS.gene005316:intron | 25.0% |
! | CATAAAGCCAAAAAACATTT+AGG | + | chr1.1:62322536-62322555 | None:intergenic | 25.0% |
! | CTAATAATAAAATGTTGGAG+GGG | - | chr1.1:62325388-62325407 | MS.gene005316:intron | 25.0% |
! | GATCAAATCACAAAACTAAA+GGG | - | chr1.1:62323980-62323999 | MS.gene005316:intron | 25.0% |
! | GTACGTGAAATAAAATGATT+GGG | + | chr1.1:62325326-62325345 | None:intergenic | 25.0% |
! | TAAAAGAATATACCATGAAG+TGG | + | chr1.1:62321056-62321075 | None:intergenic | 25.0% |
! | TAATAATAAAATGTTGGAGG+GGG | - | chr1.1:62325389-62325408 | MS.gene005316:intron | 25.0% |
! | TATGGTCTACAATTAAAACT+TGG | + | chr1.1:62324122-62324141 | None:intergenic | 25.0% |
! | TCATAATGCCTTTAAATATC+TGG | - | chr1.1:62321396-62321415 | MS.gene005316:CDS | 25.0% |
! | TCGTGTTACAAAAAAGAAAA+GGG | + | chr1.1:62321514-62321533 | None:intergenic | 25.0% |
! | TGATCAAATCACAAAACTAA+AGG | - | chr1.1:62323979-62323998 | MS.gene005316:intron | 25.0% |
! | TTACCAAAGAAATTGAATGT+GGG | + | chr1.1:62323425-62323444 | None:intergenic | 25.0% |
! | TTCGTGTTACAAAAAAGAAA+AGG | + | chr1.1:62321515-62321534 | None:intergenic | 25.0% |
! | TTTAATATATCGTTTCCTTC+CGG | - | chr1.1:62322850-62322869 | MS.gene005316:intron | 25.0% |
! | TTTACCAAAGAAATTGAATG+TGG | + | chr1.1:62323426-62323445 | None:intergenic | 25.0% |
! | TTTCTCAAGAAAAGGAAAAA+GGG | - | chr1.1:62325889-62325908 | MS.gene005316:intron | 25.0% |
!! | AAATAATGTTGCTTCATTGA+AGG | + | chr1.1:62321278-62321297 | None:intergenic | 25.0% |
!! | AATAATGTTGCTTCATTGAA+GGG | + | chr1.1:62321277-62321296 | None:intergenic | 25.0% |
!! | ATGAGATTTTCTATTATGGA+GGG | - | chr1.1:62326627-62326646 | MS.gene005316:CDS | 25.0% |
!! | ATTGAAGCTATAGAAAGTAT+AGG | - | chr1.1:62325440-62325459 | MS.gene005316:intron | 25.0% |
!! | ATTTATTACACTTGGTGATT+AGG | - | chr1.1:62321204-62321223 | MS.gene005316:intron | 25.0% |
!! | GCCAAGTTAAGTTTTTATAT+TGG | + | chr1.1:62323730-62323749 | None:intergenic | 25.0% |
!! | TAATCAATGCTTATTTCTTC+AGG | - | chr1.1:62324837-62324856 | MS.gene005316:intron | 25.0% |
!! | TATGAGATTTTCTATTATGG+AGG | - | chr1.1:62326626-62326645 | MS.gene005316:CDS | 25.0% |
!! | TGTTTGTACTAGAAAACTTT+TGG | - | chr1.1:62326328-62326347 | MS.gene005316:intron | 25.0% |
!! | TTGAAGCTATAGAAAGTATA+GGG | - | chr1.1:62325441-62325460 | MS.gene005316:intron | 25.0% |
!!! | AATTTGATGAATTTTTCAGG+AGG | - | chr1.1:62326503-62326522 | MS.gene005316:intron | 25.0% |
!!! | CAGTATTTTTGTGAAAATTC+GGG | + | chr1.1:62323300-62323319 | None:intergenic | 25.0% |
!!! | GCAGTATTTTTGTGAAAATT+CGG | + | chr1.1:62323301-62323320 | None:intergenic | 25.0% |
!!! | TTAGGGATTTTTTTTGCATA+AGG | - | chr1.1:62322500-62322519 | MS.gene005316:intron | 25.0% |
!!! | TTTCTTTTTTGTAACACGAA+TGG | - | chr1.1:62321515-62321534 | MS.gene005316:CDS | 25.0% |
!!! | TTTTACCCTTCATTTTTTCT+AGG | + | chr1.1:62324731-62324750 | None:intergenic | 25.0% |
!!! | TTTTTTGTATATCATCACAG+TGG | - | chr1.1:62324231-62324250 | MS.gene005316:intron | 25.0% |
!!! | TTTTTTTTTAAAAAGCCGGA+AGG | + | chr1.1:62322868-62322887 | None:intergenic | 25.0% |
AATAATAAAATGTTGGAGGG+GGG | - | chr1.1:62325390-62325409 | MS.gene005316:intron | 30.0% | |
AATCTCAAATACATGGGAAT+TGG | - | chr1.1:62323934-62323953 | MS.gene005316:intron | 30.0% | |
AATGTATAGCTCTTCAATGA+AGG | + | chr1.1:62323626-62323645 | None:intergenic | 30.0% | |
ACACACTAATATATAGGCAA+CGG | - | chr1.1:62323236-62323255 | MS.gene005316:intron | 30.0% | |
ACGTATCCTAGAAAAAATGA+AGG | - | chr1.1:62324722-62324741 | MS.gene005316:intron | 30.0% | |
ACTTTGACTATCAATTATGG+AGG | - | chr1.1:62322690-62322709 | MS.gene005316:intron | 30.0% | |
AGTAGCAAATCTTTACATTG+AGG | - | chr1.1:62321607-62321626 | MS.gene005316:intron | 30.0% | |
AGTTCTTCATAGATACAAAG+AGG | - | chr1.1:62321240-62321259 | MS.gene005316:intron | 30.0% | |
ATATATTGTGCATGAAGGTT+GGG | - | chr1.1:62320935-62320954 | MS.gene005316:intron | 30.0% | |
CAAATGTAAGTTAAGCTTGT+TGG | + | chr1.1:62326378-62326397 | None:intergenic | 30.0% | |
CAATCCAATCTCAAATACAT+GGG | - | chr1.1:62323928-62323947 | MS.gene005316:intron | 30.0% | |
CCCATTTCATTACTTAAGTA+GGG | + | chr1.1:62325172-62325191 | None:intergenic | 30.0% | |
CCCTACTTAAGTAATGAAAT+GGG | - | chr1.1:62325169-62325188 | MS.gene005316:intron | 30.0% | |
CGTACGTGAAATAAAATGAT+TGG | + | chr1.1:62325327-62325346 | None:intergenic | 30.0% | |
CGTATCCTAGAAAAAATGAA+GGG | - | chr1.1:62324723-62324742 | MS.gene005316:intron | 30.0% | |
CTATTATATAGTTGCATGCA+TGG | - | chr1.1:62325202-62325221 | MS.gene005316:intron | 30.0% | |
CTCATTCGGCATATAATAAT+TGG | - | chr1.1:62325468-62325487 | MS.gene005316:intron | 30.0% | |
CTTCGAATTTAAATGCCTTT+GGG | - | chr1.1:62321691-62321710 | MS.gene005316:intron | 30.0% | |
CTTCTCTTCTTGAAGAAATA+GGG | - | chr1.1:62320974-62320993 | MS.gene005316:intron | 30.0% | |
GAAAATCTCATATCTTCAGA+TGG | + | chr1.1:62326618-62326637 | None:intergenic | 30.0% | |
GAATAAACAACATTAGCCAT+TGG | + | chr1.1:62324398-62324417 | None:intergenic | 30.0% | |
GACAATGATGTGAAATTCAA+TGG | - | chr1.1:62324757-62324776 | MS.gene005316:intron | 30.0% | |
GATAGAAGAAACAACAGTAT+TGG | + | chr1.1:62324472-62324491 | None:intergenic | 30.0% | |
GATAGTAGATTTGGATAAAG+AGG | + | chr1.1:62320693-62320712 | None:intergenic | 30.0% | |
GCTTAACTTACATTTGCAAA+AGG | - | chr1.1:62326382-62326401 | MS.gene005316:intron | 30.0% | |
GGAATATACTTGAAATTCCA+AGG | - | chr1.1:62325237-62325256 | MS.gene005316:intron | 30.0% | |
GGGAAAAATATGAAATAGCA+AGG | - | chr1.1:62322363-62322382 | MS.gene005316:intron | 30.0% | |
TAAAACTTCAGTTCTATTGG+TGG | - | chr1.1:62322636-62322655 | MS.gene005316:intron | 30.0% | |
TATATATTGTGCATGAAGGT+TGG | - | chr1.1:62320934-62320953 | MS.gene005316:intron | 30.0% | |
TCAGGTAAAGAGAACTTAAT+TGG | - | chr1.1:62321370-62321389 | MS.gene005316:CDS | 30.0% | |
TCATGATCTGACACAAAAAA+AGG | + | chr1.1:62325709-62325728 | None:intergenic | 30.0% | |
TCCCATTTCATTACTTAAGT+AGG | + | chr1.1:62325173-62325192 | None:intergenic | 30.0% | |
TCCCTACTTAAGTAATGAAA+TGG | - | chr1.1:62325168-62325187 | MS.gene005316:intron | 30.0% | |
TCGACTTTGACTATCAATTA+TGG | - | chr1.1:62322687-62322706 | MS.gene005316:intron | 30.0% | |
TCTAATAAGGTTGGATATGA+CGG | - | chr1.1:62320635-62320654 | MS.gene005316:CDS | 30.0% | |
TGAAAGCGAAAGTTAATTGT+TGG | - | chr1.1:62325347-62325366 | MS.gene005316:intron | 30.0% | |
TGGAAAACTCACATGTAAAT+GGG | + | chr1.1:62324378-62324397 | None:intergenic | 30.0% | |
TTAAGTTCTCTTTACCTGAA+CGG | + | chr1.1:62321369-62321388 | None:intergenic | 30.0% | |
TTCTATAAAACAGTGGTTTC+TGG | - | chr1.1:62325143-62325162 | MS.gene005316:intron | 30.0% | |
TTGACTCATTCTTACATGAA+CGG | + | chr1.1:62323705-62323724 | None:intergenic | 30.0% | |
TTGGAAAACTCACATGTAAA+TGG | + | chr1.1:62324379-62324398 | None:intergenic | 30.0% | |
! | AATTCCCATGTATTTGAGAT+TGG | + | chr1.1:62323935-62323954 | None:intergenic | 30.0% |
! | ACAATGGTACTCATAGATTT+TGG | + | chr1.1:62323071-62323090 | None:intergenic | 30.0% |
! | ATAATTGGTTCATCAATCAG+AGG | - | chr1.1:62326577-62326596 | MS.gene005316:CDS | 30.0% |
! | ATACTTGCTGACAAAGTTAT+AGG | + | chr1.1:62322144-62322163 | None:intergenic | 30.0% |
! | ATCCTGACTGGAATAATTTT+TGG | - | chr1.1:62326130-62326149 | MS.gene005316:intron | 30.0% |
! | ATCTATACTCGTGTTCTTTT+TGG | + | chr1.1:62321819-62321838 | None:intergenic | 30.0% |
! | ATTTTTGTGAAAATTCGGGT+CGG | + | chr1.1:62323296-62323315 | None:intergenic | 30.0% |
! | GAAGTATCTTATACGTATCT+TGG | + | chr1.1:62324696-62324715 | None:intergenic | 30.0% |
! | GTAATGAAATGGGAATGTTT+TGG | - | chr1.1:62325179-62325198 | MS.gene005316:intron | 30.0% |
! | GTATAGGTTTGCTTTGAATT+TGG | + | chr1.1:62323482-62323501 | None:intergenic | 30.0% |
! | TACTTGCTGACAAAGTTATA+GGG | + | chr1.1:62322143-62322162 | None:intergenic | 30.0% |
! | TGTATATTTTGTCCAACGAA+TGG | - | chr1.1:62326086-62326105 | MS.gene005316:intron | 30.0% |
! | TTCTCACTAGTACTAGTTTA+GGG | - | chr1.1:62322483-62322502 | MS.gene005316:intron | 30.0% |
! | TTTACATGTGAGTTTTCCAA+TGG | - | chr1.1:62324379-62324398 | MS.gene005316:intron | 30.0% |
! | TTTCTCACTAGTACTAGTTT+AGG | - | chr1.1:62322482-62322501 | MS.gene005316:intron | 30.0% |
! | TTTGTTGTCCGACAATAATA+TGG | - | chr1.1:62322938-62322957 | MS.gene005316:intron | 30.0% |
! | TTTTGTTGAATGTGTGTACA+TGG | + | chr1.1:62325543-62325562 | None:intergenic | 30.0% |
!!! | AAAGCTCCCTAAATGTTTTT+TGG | - | chr1.1:62322526-62322545 | MS.gene005316:intron | 30.0% |
!!! | AGTTTAGTTTTGTTGGGTTT+CGG | - | chr1.1:62323450-62323469 | MS.gene005316:intron | 30.0% |
!!! | GTGCGTAAATGATTTTGATT+TGG | - | chr1.1:62322441-62322460 | MS.gene005316:intron | 30.0% |
!!! | TGCTTTTTTAGAATGCCAAA+AGG | - | chr1.1:62320713-62320732 | MS.gene005316:CDS | 30.0% |
!!! | TTTTTTTGTGTCAGATCATG+AGG | - | chr1.1:62325708-62325727 | MS.gene005316:intron | 30.0% |
AAATGCTCCTTCGTAAGTAT+GGG | - | chr1.1:62325839-62325858 | MS.gene005316:intron | 35.0% | |
AACTAAACGAACTTTGCAAG+GGG | - | chr1.1:62321317-62321336 | MS.gene005316:CDS | 35.0% | |
AAGAAATTGAATGTGGGTCT+CGG | + | chr1.1:62323419-62323438 | None:intergenic | 35.0% | |
AAGTGTATCTCATTTAGCTG+TGG | + | chr1.1:62322294-62322313 | None:intergenic | 35.0% | |
AATAATGCTTTCCGTGAGAT+AGG | - | chr1.1:62321012-62321031 | MS.gene005316:intron | 35.0% | |
AATATACCATGAAGTGGTCA+AGG | + | chr1.1:62321050-62321069 | None:intergenic | 35.0% | |
ACAACCAATCGGATCTAATA+AGG | - | chr1.1:62320622-62320641 | MS.gene005316:CDS | 35.0% | |
ACAACTAAACGAACTTTGCA+AGG | - | chr1.1:62321315-62321334 | MS.gene005316:CDS | 35.0% | |
ACACTAATATATAGGCAACG+GGG | - | chr1.1:62323238-62323257 | MS.gene005316:intron | 35.0% | |
ACACTGTAACACCAACAAAA+TGG | + | chr1.1:62326307-62326326 | None:intergenic | 35.0% | |
ACTTACATGCTCTTTGTGAA+AGG | - | chr1.1:62322612-62322631 | MS.gene005316:intron | 35.0% | |
AGACCCACATTCAATTTCTT+TGG | - | chr1.1:62323419-62323438 | MS.gene005316:intron | 35.0% | |
AGCAAAGAAGCTTGACAAAA+TGG | + | chr1.1:62326440-62326459 | None:intergenic | 35.0% | |
AGTACTATGTATGAGATCCT+GGG | - | chr1.1:62324176-62324195 | MS.gene005316:intron | 35.0% | |
ATAATAAAATGTTGGAGGGG+GGG | - | chr1.1:62325391-62325410 | MS.gene005316:intron | 35.0% | |
ATTTGAATTACCGTGGGATA+AGG | + | chr1.1:62325976-62325995 | None:intergenic | 35.0% | |
CAACTAAACGAACTTTGCAA+GGG | - | chr1.1:62321316-62321335 | MS.gene005316:CDS | 35.0% | |
CACACTAATATATAGGCAAC+GGG | - | chr1.1:62323237-62323256 | MS.gene005316:intron | 35.0% | |
CCAATCCAATCTCAAATACA+TGG | - | chr1.1:62323927-62323946 | MS.gene005316:intron | 35.0% | |
CCATTCCATAAGTACTCTTA+GGG | - | chr1.1:62324042-62324061 | MS.gene005316:intron | 35.0% | |
CCTTCGAATTTAAATGCCTT+TGG | - | chr1.1:62321690-62321709 | MS.gene005316:intron | 35.0% | |
CTACACAGTATCTGAAAGAA+AGG | + | chr1.1:62322768-62322787 | None:intergenic | 35.0% | |
CTTACATGCTCTTTGTGAAA+GGG | - | chr1.1:62322613-62322632 | MS.gene005316:intron | 35.0% | |
GAAAAAGGGTAAACTACCAA+AGG | - | chr1.1:62325903-62325922 | MS.gene005316:intron | 35.0% | |
GAAAAGAGTAATTCACTGCT+AGG | + | chr1.1:62325072-62325091 | None:intergenic | 35.0% | |
GACAGGAATTTCTCAAGAAA+AGG | - | chr1.1:62325881-62325900 | MS.gene005316:intron | 35.0% | |
GACCAAAAATTATTCCAGTC+AGG | + | chr1.1:62326135-62326154 | None:intergenic | 35.0% | |
GATGCATACACATAACACTA+GGG | + | chr1.1:62324257-62324276 | None:intergenic | 35.0% | |
GCTTCTCTTCTTGAAGAAAT+AGG | - | chr1.1:62320973-62320992 | MS.gene005316:intron | 35.0% | |
GGGTAAAACTTCAGTTCTAT+TGG | - | chr1.1:62322633-62322652 | MS.gene005316:intron | 35.0% | |
GTCAGTTGAGTTAAGACTTA+TGG | + | chr1.1:62324347-62324366 | None:intergenic | 35.0% | |
GTTGCCTATATATTAGTGTG+TGG | + | chr1.1:62323237-62323256 | None:intergenic | 35.0% | |
TAATTGTAGTGCCTCAATTG+TGG | + | chr1.1:62322022-62322041 | None:intergenic | 35.0% | |
TATATTGTGCATGAAGGTTG+GGG | - | chr1.1:62320936-62320955 | MS.gene005316:intron | 35.0% | |
TATCGGATACCAATACTTCA+CGG | - | chr1.1:62324530-62324549 | MS.gene005316:intron | 35.0% | |
TATGATACGATACAGGTACA+CGG | + | chr1.1:62324951-62324970 | None:intergenic | 35.0% | |
TCAGCCACACACTAATATAT+AGG | - | chr1.1:62323230-62323249 | MS.gene005316:intron | 35.0% | |
TCCTTCATTTGGAAACAGAA+GGG | - | chr1.1:62326198-62326217 | MS.gene005316:intron | 35.0% | |
TCTTTAAGCTCTTTATCACC+TGG | + | chr1.1:62325820-62325839 | None:intergenic | 35.0% | |
TGACTCATTCTTACATGAAC+GGG | + | chr1.1:62323704-62323723 | None:intergenic | 35.0% | |
TGATGCATACACATAACACT+AGG | + | chr1.1:62324258-62324277 | None:intergenic | 35.0% | |
TGGAATTGACGTTGTTATCT+TGG | + | chr1.1:62326420-62326439 | None:intergenic | 35.0% | |
TTACCTTAGCAACTTAAGAC+AGG | - | chr1.1:62325864-62325883 | MS.gene005316:intron | 35.0% | |
TTAGGCTCACACACATAAAA+GGG | - | chr1.1:62322343-62322362 | MS.gene005316:intron | 35.0% | |
TTATTCTATCCTATGAAGCC+CGG | - | chr1.1:62324412-62324431 | MS.gene005316:intron | 35.0% | |
TTTACCTGAACGGTTGTAAT+CGG | + | chr1.1:62321359-62321378 | None:intergenic | 35.0% | |
TTTAGGCTCACACACATAAA+AGG | - | chr1.1:62322342-62322361 | MS.gene005316:intron | 35.0% | |
! | AATGCTTTTCTTGCATCCTT+TGG | + | chr1.1:62325922-62325941 | None:intergenic | 35.0% |
! | ACTTGCTGACAAAGTTATAG+GGG | + | chr1.1:62322142-62322161 | None:intergenic | 35.0% |
! | ATAGTGGAGTTTCCCTTAAA+CGG | - | chr1.1:62323756-62323775 | MS.gene005316:intron | 35.0% |
! | ATTCCTGTCTTAAGTTGCTA+AGG | + | chr1.1:62325870-62325889 | None:intergenic | 35.0% |
! | ATTTGAGTTCAAATCCTGAC+TGG | - | chr1.1:62326118-62326137 | MS.gene005316:intron | 35.0% |
! | CCATGTATTTGAGATTGGAT+TGG | + | chr1.1:62323930-62323949 | None:intergenic | 35.0% |
! | CGTAACAACGTATTTTCTAG+AGG | - | chr1.1:62322579-62322598 | MS.gene005316:intron | 35.0% |
! | GAAGGTTGACTTAATTGACA+AGG | + | chr1.1:62323608-62323627 | None:intergenic | 35.0% |
! | GTACTAGAAAACTTTTGGCA+TGG | - | chr1.1:62326333-62326352 | MS.gene005316:intron | 35.0% |
! | TAACACCAACAAAATGGACT+AGG | + | chr1.1:62326301-62326320 | None:intergenic | 35.0% |
! | TACGTATCTTGGTGTATATG+TGG | + | chr1.1:62324685-62324704 | None:intergenic | 35.0% |
! | TTTTCTTCCTTTCCATGTCA+AGG | - | chr1.1:62325087-62325106 | MS.gene005316:intron | 35.0% |
! | TTTTGGTACCCCTGAAAATA+TGG | - | chr1.1:62322231-62322250 | MS.gene005316:intron | 35.0% |
! | TTTTTGTGAAAATTCGGGTC+GGG | + | chr1.1:62323295-62323314 | None:intergenic | 35.0% |
!! | AACAGTATTGGTATCCGATA+CGG | + | chr1.1:62324460-62324479 | None:intergenic | 35.0% |
!! | AATCCTACTTTAGAGTCACT+TGG | + | chr1.1:62321856-62321875 | None:intergenic | 35.0% |
!! | ACAACGTATTTTCTAGAGGA+AGG | - | chr1.1:62322583-62322602 | MS.gene005316:intron | 35.0% |
!! | CAAGAAAAGCATTGATGGAT+TGG | - | chr1.1:62325929-62325948 | MS.gene005316:CDS | 35.0% |
!! | CCAAAGGCATTTAAATTCGA+AGG | + | chr1.1:62321693-62321712 | None:intergenic | 35.0% |
!! | CCTAAGAGTACTTATGGAAT+GGG | + | chr1.1:62324044-62324063 | None:intergenic | 35.0% |
!! | TGAAGTATTGGTATCCGATA+CGG | + | chr1.1:62324530-62324549 | None:intergenic | 35.0% |
!!! | GTTTAGTTTTGTTGGGTTTC+GGG | - | chr1.1:62323451-62323470 | MS.gene005316:intron | 35.0% |
!!! | TCTCACGGAAAGCATTATTT+TGG | + | chr1.1:62321011-62321030 | None:intergenic | 35.0% |
!!! | TTGATGAATTTTTCAGGAGG+AGG | - | chr1.1:62326506-62326525 | MS.gene005316:intron | 35.0% |
!!! | TTTAGTTTTGTTGGGTTTCG+GGG | - | chr1.1:62323452-62323471 | MS.gene005316:intron | 35.0% |
AATGCTCCTTCGTAAGTATG+GGG | - | chr1.1:62325840-62325859 | MS.gene005316:intron | 40.0% | |
AATTTCCTCGAACCATTCGT+TGG | + | chr1.1:62326101-62326120 | None:intergenic | 40.0% | |
ACCCTTCTGTTTCCAAATGA+AGG | + | chr1.1:62326202-62326221 | None:intergenic | 40.0% | |
ACTAGCAGTGCTAACTTAAG+AGG | + | chr1.1:62321653-62321672 | None:intergenic | 40.0% | |
AGAAGAGAAGCAAGTTCTGT+TGG | + | chr1.1:62320964-62320983 | None:intergenic | 40.0% | |
AGACCATAAGCCACTGAAAT+TGG | - | chr1.1:62324134-62324153 | MS.gene005316:intron | 40.0% | |
CAATACTTCACGGATACTGT+CGG | - | chr1.1:62324540-62324559 | MS.gene005316:intron | 40.0% | |
CATTCTTACATGAACGGGTA+AGG | + | chr1.1:62323699-62323718 | None:intergenic | 40.0% | |
CCAACCTTATTAGATCCGAT+TGG | + | chr1.1:62320629-62320648 | None:intergenic | 40.0% | |
CCAATCGGATCTAATAAGGT+TGG | - | chr1.1:62320626-62320645 | MS.gene005316:CDS | 40.0% | |
CCCATTCCATAAGTACTCTT+AGG | - | chr1.1:62324041-62324060 | MS.gene005316:intron | 40.0% | |
CGATACTTCACAGATACTCT+CGG | - | chr1.1:62324584-62324603 | MS.gene005316:intron | 40.0% | |
CGTACATACCATGAAAGAGA+TGG | - | chr1.1:62325299-62325318 | MS.gene005316:intron | 40.0% | |
CTCCTTCATTTGGAAACAGA+AGG | - | chr1.1:62326197-62326216 | MS.gene005316:intron | 40.0% | |
GAAAAAGTCCTGAACACGAA+TGG | - | chr1.1:62321488-62321507 | MS.gene005316:CDS | 40.0% | |
GAAATGCTCCTTCGTAAGTA+TGG | - | chr1.1:62325838-62325857 | MS.gene005316:intron | 40.0% | |
GAGTACTATGTATGAGATCC+TGG | - | chr1.1:62324175-62324194 | MS.gene005316:intron | 40.0% | |
GATATAATGCAGCCTTGACA+TGG | + | chr1.1:62325102-62325121 | None:intergenic | 40.0% | |
GGATGAAATGAGTTGTGGAA+AGG | - | chr1.1:62325747-62325766 | MS.gene005316:intron | 40.0% | |
TAATATATAGGCAACGGGGT+GGG | - | chr1.1:62323242-62323261 | MS.gene005316:intron | 40.0% | |
TAGTGGAGTTTCCCTTAAAC+GGG | - | chr1.1:62323757-62323776 | MS.gene005316:intron | 40.0% | |
TATATTAGTGTGTGGCTGAG+TGG | + | chr1.1:62323229-62323248 | None:intergenic | 40.0% | |
TCAATCAGAGGAAAAGACAC+TGG | - | chr1.1:62326589-62326608 | MS.gene005316:CDS | 40.0% | |
TCAGAGGATGAAATGAGTTG+TGG | - | chr1.1:62325742-62325761 | MS.gene005316:intron | 40.0% | |
TGCTAACTTAAGAGGACAGA+TGG | + | chr1.1:62321645-62321664 | None:intergenic | 40.0% | |
TTCCATAAGTACTCTTAGGG+AGG | - | chr1.1:62324045-62324064 | MS.gene005316:intron | 40.0% | |
TTCTTCTATCCTATGAAGCC+CGG | - | chr1.1:62324482-62324501 | MS.gene005316:intron | 40.0% | |
TTTACCTCTCAACTGAACTC+CGG | - | chr1.1:62326163-62326182 | MS.gene005316:intron | 40.0% | |
TTTCAAACCCGGCAAAGTTT+GGG | + | chr1.1:62323331-62323350 | None:intergenic | 40.0% | |
TTTCCAAATGAAGGAGACTC+CGG | + | chr1.1:62326193-62326212 | None:intergenic | 40.0% | |
! | AAGTATAGGGCTGACTCATT+CGG | - | chr1.1:62325454-62325473 | MS.gene005316:intron | 40.0% |
! | AGAAAACTTTTGGCATGGTG+AGG | - | chr1.1:62326338-62326357 | MS.gene005316:intron | 40.0% |
! | AGGTTCCTAGTCCATTTTGT+TGG | - | chr1.1:62326293-62326312 | MS.gene005316:CDS | 40.0% |
! | ATCATAGAAAGCGCATGTCT+TGG | + | chr1.1:62323881-62323900 | None:intergenic | 40.0% |
! | CATGCATGGTGAGAATGTTT+TGG | - | chr1.1:62325216-62325235 | MS.gene005316:intron | 40.0% |
! | CGGAATTTTCTTGATAGGAG+CGG | + | chr1.1:62323399-62323418 | None:intergenic | 40.0% |
! | GGTCTCGGAATTTTCTTGAT+AGG | + | chr1.1:62323404-62323423 | None:intergenic | 40.0% |
! | GGTGGTCATGATGAATTTTG+TGG | - | chr1.1:62325784-62325803 | MS.gene005316:intron | 40.0% |
! | TGCTAGTATTGAGATCAAGC+TGG | - | chr1.1:62321666-62321685 | MS.gene005316:intron | 40.0% |
! | TTAACTTGGCCACATCATAG+TGG | - | chr1.1:62323740-62323759 | MS.gene005316:intron | 40.0% |
! | TTTTCAAACCCGGCAAAGTT+TGG | + | chr1.1:62323332-62323351 | None:intergenic | 40.0% |
! | TTTTGTGAAAATTCGGGTCG+GGG | + | chr1.1:62323294-62323313 | None:intergenic | 40.0% |
!! | ACAGTATTGGTATCCGATAC+GGG | + | chr1.1:62324459-62324478 | None:intergenic | 40.0% |
!! | ACGTATTTTCTAGAGGAAGG+AGG | - | chr1.1:62322586-62322605 | MS.gene005316:intron | 40.0% |
!! | ATCCTCCCTAAGAGTACTTA+TGG | + | chr1.1:62324050-62324069 | None:intergenic | 40.0% |
!! | CCCTAAGAGTACTTATGGAA+TGG | + | chr1.1:62324045-62324064 | None:intergenic | 40.0% |
!! | CGAGAGTATCTGTGAAGTAT+CGG | + | chr1.1:62324586-62324605 | None:intergenic | 40.0% |
!! | GAAAAGCATTGATGGATTGG+TGG | - | chr1.1:62325932-62325951 | MS.gene005316:CDS | 40.0% |
!! | GAACCAAGTGACTCTAAAGT+AGG | - | chr1.1:62321850-62321869 | MS.gene005316:intron | 40.0% |
!! | GAAGTATTGGTATCCGATAC+GGG | + | chr1.1:62324529-62324548 | None:intergenic | 40.0% |
!! | GGATGCAAGAAAAGCATTGA+TGG | - | chr1.1:62325924-62325943 | MS.gene005316:intron | 40.0% |
!! | TGCGTGCTTATTTTCAAACC+CGG | + | chr1.1:62323342-62323361 | None:intergenic | 40.0% |
!!! | CACGGAAAGCATTATTTTGG+TGG | + | chr1.1:62321008-62321027 | None:intergenic | 40.0% |
AAGGTTGAAGCAGTAGAAGG+TGG | - | chr1.1:62325766-62325785 | MS.gene005316:intron | 45.0% | |
AATGCAGCCTTGACATGGAA+AGG | + | chr1.1:62325097-62325116 | None:intergenic | 45.0% | |
AGCCACTGAAATTGGTCCAA+TGG | - | chr1.1:62324142-62324161 | MS.gene005316:intron | 45.0% | |
AGGGAAACTCCACTATGATG+TGG | + | chr1.1:62323752-62323771 | None:intergenic | 45.0% | |
AGTCCTACCCACAACTTTGT+GGG | - | chr1.1:62323572-62323591 | MS.gene005316:intron | 45.0% | |
AGTGGAGTTTCCCTTAAACG+GGG | - | chr1.1:62323758-62323777 | MS.gene005316:intron | 45.0% | |
ATGCTCCTTCGTAAGTATGG+GGG | - | chr1.1:62325841-62325860 | MS.gene005316:intron | 45.0% | |
ATTGGTGGAACGTCCACTAT+AGG | - | chr1.1:62325947-62325966 | MS.gene005316:CDS | 45.0% | |
ATTTGTCCCCAAACTTTGCC+GGG | - | chr1.1:62323321-62323340 | MS.gene005316:intron | 45.0% | |
CACCATTGGACCAATTTCAG+TGG | + | chr1.1:62324147-62324166 | None:intergenic | 45.0% | |
CAGGATCATCTCCTATCTCA+CGG | + | chr1.1:62321026-62321045 | None:intergenic | 45.0% | |
CATTTGTCCCCAAACTTTGC+CGG | - | chr1.1:62323320-62323339 | MS.gene005316:intron | 45.0% | |
CGACAGTATCCGTGAAGTAT+TGG | + | chr1.1:62324542-62324561 | None:intergenic | 45.0% | |
CTAATATATAGGCAACGGGG+TGG | - | chr1.1:62323241-62323260 | MS.gene005316:intron | 45.0% | |
CTGAAATTGGTCCAATGGTG+AGG | - | chr1.1:62324147-62324166 | MS.gene005316:intron | 45.0% | |
GATTGGGACCATCTCTTTCA+TGG | + | chr1.1:62325310-62325329 | None:intergenic | 45.0% | |
GGAAAGGTTGAAGCAGTAGA+AGG | - | chr1.1:62325763-62325782 | MS.gene005316:intron | 45.0% | |
GGACCAATTTCAGTGGCTTA+TGG | + | chr1.1:62324140-62324159 | None:intergenic | 45.0% | |
GTACATATCACCCACCAAAG+AGG | - | chr1.1:62323530-62323549 | MS.gene005316:intron | 45.0% | |
GTACTCAAACTCCTCACCAT+TGG | + | chr1.1:62324161-62324180 | None:intergenic | 45.0% | |
TAATCCGGAGTTCAGTTGAG+AGG | + | chr1.1:62326170-62326189 | None:intergenic | 45.0% | |
TAGATAGAAGCTACGAAGCC+CGG | + | chr1.1:62324993-62325012 | None:intergenic | 45.0% | |
TCAACTGAACTCCGGATTAC+CGG | - | chr1.1:62326171-62326190 | MS.gene005316:intron | 45.0% | |
TCGGTACACTTTGTACGAGA+TGG | - | chr1.1:62322814-62322833 | MS.gene005316:intron | 45.0% | |
TCTTCCGATTACAACCGTTC+AGG | - | chr1.1:62321352-62321371 | MS.gene005316:CDS | 45.0% | |
TGACTCACCCACAAAGTTGT+GGG | + | chr1.1:62323582-62323601 | None:intergenic | 45.0% | |
TGTCGGATACGTACCTGTAT+CGG | - | chr1.1:62324557-62324576 | MS.gene005316:intron | 45.0% | |
TTACATGAACGGGTAAGGTG+AGG | + | chr1.1:62323694-62323713 | None:intergenic | 45.0% | |
TTACCGGAGTCTCCTTCATT+TGG | - | chr1.1:62326187-62326206 | MS.gene005316:intron | 45.0% | |
TTCAAACCCGGCAAAGTTTG+GGG | + | chr1.1:62323330-62323349 | None:intergenic | 45.0% | |
TTGACTCACCCACAAAGTTG+TGG | + | chr1.1:62323583-62323602 | None:intergenic | 45.0% | |
TTTGTCCAACGAATGGTTCG+AGG | - | chr1.1:62326093-62326112 | MS.gene005316:intron | 45.0% | |
TTTGTGAAAATTCGGGTCGG+GGG | + | chr1.1:62323293-62323312 | None:intergenic | 45.0% | |
! | TGTTGCTTCATTGAAGGGCT+TGG | + | chr1.1:62321272-62321291 | None:intergenic | 45.0% |
! | TTTTGTGGCACATCATGTCC+AGG | - | chr1.1:62325799-62325818 | MS.gene005316:intron | 45.0% |
!! | CAAGTGTCGAGTGTAGACTT+TGG | + | chr1.1:62321885-62321904 | None:intergenic | 45.0% |
!! | GAAGTATCGGTATCCGATAC+AGG | + | chr1.1:62324573-62324592 | None:intergenic | 45.0% |
!! | TCCAGGGCACCATATTTTCA+GGG | + | chr1.1:62322243-62322262 | None:intergenic | 45.0% |
!!! | TTTTATTAAATATTTTATAG+TGG | + | chr1.1:62321986-62322005 | None:intergenic | 5.0% |
AAACGGACACGTACCCGTAT+CGG | - | chr1.1:62324443-62324462 | MS.gene005316:intron | 50.0% | |
AAAGAGGGTGAGTTGCGATC+TGG | + | chr1.1:62320677-62320696 | None:intergenic | 50.0% | |
AATGCGAGGACCTCTTTGGT+GGG | + | chr1.1:62323543-62323562 | None:intergenic | 50.0% | |
AATGGAGACGGTTTGAACCC+AGG | + | chr1.1:62324196-62324215 | None:intergenic | 50.0% | |
ACCAAATCCGCCCCGTTTAA+GGG | + | chr1.1:62323771-62323790 | None:intergenic | 50.0% | |
ACCATGAAGTGGTCAAGGTC+AGG | + | chr1.1:62321045-62321064 | None:intergenic | 50.0% | |
CCATCTCATGATTCGCCCAA+AGG | + | chr1.1:62321709-62321728 | None:intergenic | 50.0% | |
CCCGCACTCATATCAGTATC+CGG | - | chr1.1:62324971-62324990 | MS.gene005316:intron | 50.0% | |
CCCGGATACTGATATGAGTG+CGG | + | chr1.1:62324975-62324994 | None:intergenic | 50.0% | |
CCGCACTCATATCAGTATCC+GGG | - | chr1.1:62324972-62324991 | MS.gene005316:intron | 50.0% | |
CCGGATACTGATATGAGTGC+GGG | + | chr1.1:62324974-62324993 | None:intergenic | 50.0% | |
CCTTTGGGCGAATCATGAGA+TGG | - | chr1.1:62321706-62321725 | MS.gene005316:intron | 50.0% | |
CTGCAGCTGTCAGATATGAC+TGG | - | chr1.1:62326534-62326553 | MS.gene005316:intron | 50.0% | |
GAAAAGGGCCATTCGTGTTC+AGG | + | chr1.1:62321499-62321518 | None:intergenic | 50.0% | |
GAAGCCCGGATACTCCAAAA+CGG | - | chr1.1:62324426-62324445 | MS.gene005316:intron | 50.0% | |
GAGTCCTACCCACAACTTTG+TGG | - | chr1.1:62323571-62323590 | MS.gene005316:intron | 50.0% | |
GGTAACCCCCATACTTACGA+AGG | + | chr1.1:62325849-62325868 | None:intergenic | 50.0% | |
GTAAGTAGCACCAGCATAGC+AGG | - | chr1.1:62326651-62326670 | MS.gene005316:CDS | 50.0% | |
GTGCGGGTATGATACGATAC+AGG | + | chr1.1:62324958-62324977 | None:intergenic | 50.0% | |
TACCAATGCGAGGACCTCTT+TGG | + | chr1.1:62323547-62323566 | None:intergenic | 50.0% | |
TCACCCACAAAGTTGTGGGT+AGG | + | chr1.1:62323578-62323597 | None:intergenic | 50.0% | |
TCCTGACCTTGACCACTTCA+TGG | - | chr1.1:62321041-62321060 | MS.gene005316:intron | 50.0% | |
TGAAGGAGACTCCGGTAATC+CGG | + | chr1.1:62326185-62326204 | None:intergenic | 50.0% | |
TGGGATAAGGCCACCTATAG+TGG | + | chr1.1:62325963-62325982 | None:intergenic | 50.0% | |
TGTCAGATCATGAGGCAGCA+GGG | - | chr1.1:62325716-62325735 | MS.gene005316:intron | 50.0% | |
TTACAGAGGTCCTGCTATGC+TGG | + | chr1.1:62326664-62326683 | None:intergenic | 50.0% | |
TTAGCTGTGGTCCTGAGCAT+GGG | + | chr1.1:62322281-62322300 | None:intergenic | 50.0% | |
TTCTTGATAGGAGCGGTACG+AGG | + | chr1.1:62323392-62323411 | None:intergenic | 50.0% | |
TTTAGCTGTGGTCCTGAGCA+TGG | + | chr1.1:62322282-62322301 | None:intergenic | 50.0% | |
! | ATACGGGTACGTGTCCGTTT+TGG | + | chr1.1:62324443-62324462 | None:intergenic | 50.0% |
! | TTAAACGGGGCGGATTTGGT+CGG | - | chr1.1:62323771-62323790 | MS.gene005316:intron | 50.0% |
! | TTGGAGTATCCGGGCTTCAT+AGG | + | chr1.1:62324424-62324443 | None:intergenic | 50.0% |
!! | CCAGGGCACCATATTTTCAG+GGG | + | chr1.1:62322242-62322261 | None:intergenic | 50.0% |
!! | CTATAGGTGGCCTTATCCCA+CGG | - | chr1.1:62325963-62325982 | MS.gene005316:CDS | 50.0% |
!! | GTCCAGGGCACCATATTTTC+AGG | + | chr1.1:62322244-62322263 | None:intergenic | 50.0% |
!!! | CGTGTCCGTTTTGGAGTATC+CGG | + | chr1.1:62324434-62324453 | None:intergenic | 50.0% |
!!! | GTGTCCGTTTTGGAGTATCC+GGG | + | chr1.1:62324433-62324452 | None:intergenic | 50.0% |
AGGAGCGGTACGAGGAAACT+CGG | + | chr1.1:62323384-62323403 | None:intergenic | 55.0% | |
CAATGCGAGGACCTCTTTGG+TGG | + | chr1.1:62323544-62323563 | None:intergenic | 55.0% | |
CACCAAAGAGGTCCTCGCAT+TGG | - | chr1.1:62323542-62323561 | MS.gene005316:intron | 55.0% | |
CCCCTGAAAATATGGTGCCC+TGG | - | chr1.1:62322239-62322258 | MS.gene005316:intron | 55.0% | |
GACCAAATCCGCCCCGTTTA+AGG | + | chr1.1:62323772-62323791 | None:intergenic | 55.0% | |
GGACTCATGCTACCAATGCG+AGG | + | chr1.1:62323557-62323576 | None:intergenic | 55.0% | |
GGAGTTTCCCTTAAACGGGG+CGG | - | chr1.1:62323761-62323780 | MS.gene005316:intron | 55.0% | |
GGTGGAACGTCCACTATAGG+TGG | - | chr1.1:62325950-62325969 | MS.gene005316:CDS | 55.0% | |
GTGTCAGATCATGAGGCAGC+AGG | - | chr1.1:62325715-62325734 | MS.gene005316:intron | 55.0% | |
TTGGTCGGGTTTGGGTAGGT+GGG | - | chr1.1:62323786-62323805 | MS.gene005316:intron | 55.0% | |
TTTGGTCGGGTTTGGGTAGG+TGG | - | chr1.1:62323785-62323804 | MS.gene005316:intron | 55.0% | |
! | GGATTTGGTCGGGTTTGGGT+AGG | - | chr1.1:62323782-62323801 | MS.gene005316:intron | 55.0% |
! | TAAACGGGGCGGATTTGGTC+GGG | - | chr1.1:62323772-62323791 | MS.gene005316:intron | 55.0% |
! | TATAGGCAACGGGGTGGGTT+AGG | - | chr1.1:62323247-62323266 | MS.gene005316:intron | 55.0% |
! | TCCCTTAAACGGGGCGGATT+TGG | - | chr1.1:62323767-62323786 | MS.gene005316:intron | 55.0% |
!! | ATAGGCAACGGGGTGGGTTA+GGG | - | chr1.1:62323248-62323267 | MS.gene005316:intron | 55.0% |
ACGCATTTCCGCCCCCAATC+GGG | - | chr1.1:62323357-62323376 | MS.gene005316:intron | 60.0% | |
AGGAAACTCGGCCCCGATTG+GGG | + | chr1.1:62323372-62323391 | None:intergenic | 60.0% | |
AGGACAGATGGTCGTGACGC+GGG | + | chr1.1:62321633-62321652 | None:intergenic | 60.0% | |
CACGCATTTCCGCCCCCAAT+CGG | - | chr1.1:62323356-62323375 | MS.gene005316:intron | 60.0% | |
GAGGAAACTCGGCCCCGATT+GGG | + | chr1.1:62323373-62323392 | None:intergenic | 60.0% | |
GAGGACAGATGGTCGTGACG+CGG | + | chr1.1:62321634-62321653 | None:intergenic | 60.0% | |
TGAGGCAGCAGGGACATCAG+AGG | - | chr1.1:62325726-62325745 | MS.gene005316:intron | 60.0% | |
! | GGGCGGATTTGGTCGGGTTT+GGG | - | chr1.1:62323778-62323797 | MS.gene005316:intron | 60.0% |
!! | TAGGCAACGGGGTGGGTTAG+GGG | - | chr1.1:62323249-62323268 | MS.gene005316:intron | 60.0% |
CGAGGAAACTCGGCCCCGAT+TGG | + | chr1.1:62323374-62323393 | None:intergenic | 65.0% | |
CGCATTTCCGCCCCCAATCG+GGG | - | chr1.1:62323358-62323377 | MS.gene005316:intron | 65.0% | |
GGAAACTCGGCCCCGATTGG+GGG | + | chr1.1:62323371-62323390 | None:intergenic | 65.0% | |
TGGTCCTGAGCATGGGCCGA+GGG | + | chr1.1:62322274-62322293 | None:intergenic | 65.0% | |
! | GGGGCGGATTTGGTCGGGTT+TGG | - | chr1.1:62323777-62323796 | MS.gene005316:intron | 65.0% |
AACTCGGCCCCGATTGGGGG+CGG | + | chr1.1:62323368-62323387 | None:intergenic | 70.0% | |
GGTCCTGAGCATGGGCCGAG+GGG | + | chr1.1:62322273-62322292 | None:intergenic | 70.0% | |
GTCCTGAGCATGGGCCGAGG+GGG | + | chr1.1:62322272-62322291 | None:intergenic | 70.0% | |
GTGGTCCTGAGCATGGGCCG+AGG | + | chr1.1:62322275-62322294 | None:intergenic | 70.0% | |
CTCCCCCTCGGCCCATGCTC+AGG | - | chr1.1:62322267-62322286 | MS.gene005316:intron | 75.0% | |
CTGAGCATGGGCCGAGGGGG+AGG | + | chr1.1:62322269-62322288 | None:intergenic | 75.0% | |
GCCCTGGACTGCCTCCCCCT+CGG | - | chr1.1:62322255-62322274 | MS.gene005316:intron | 75.0% | |
GCCGAGGGGGAGGCAGTCCA+GGG | + | chr1.1:62322259-62322278 | None:intergenic | 75.0% | |
! | GGCCGAGGGGGAGGCAGTCC+AGG | + | chr1.1:62322260-62322279 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 62320615 | 62326683 | 62320615 | ID=MS.gene005316 |
chr1.1 | mRNA | 62320615 | 62326683 | 62320615 | ID=MS.gene005316.t1;Parent=MS.gene005316 |
chr1.1 | exon | 62326564 | 62326683 | 62326564 | ID=MS.gene005316.t1.exon1;Parent=MS.gene005316.t1 |
chr1.1 | CDS | 62326564 | 62326683 | 62326564 | ID=cds.MS.gene005316.t1;Parent=MS.gene005316.t1 |
chr1.1 | exon | 62326236 | 62326346 | 62326236 | ID=MS.gene005316.t1.exon2;Parent=MS.gene005316.t1 |
chr1.1 | CDS | 62326236 | 62326346 | 62326236 | ID=cds.MS.gene005316.t1;Parent=MS.gene005316.t1 |
chr1.1 | exon | 62325925 | 62326072 | 62325925 | ID=MS.gene005316.t1.exon3;Parent=MS.gene005316.t1 |
chr1.1 | CDS | 62325925 | 62326072 | 62325925 | ID=cds.MS.gene005316.t1;Parent=MS.gene005316.t1 |
chr1.1 | exon | 62321314 | 62321576 | 62321314 | ID=MS.gene005316.t1.exon4;Parent=MS.gene005316.t1 |
chr1.1 | CDS | 62321314 | 62321576 | 62321314 | ID=cds.MS.gene005316.t1;Parent=MS.gene005316.t1 |
chr1.1 | exon | 62320615 | 62320776 | 62320615 | ID=MS.gene005316.t1.exon5;Parent=MS.gene005316.t1 |
chr1.1 | CDS | 62320615 | 62320776 | 62320615 | ID=cds.MS.gene005316.t1;Parent=MS.gene005316.t1 |
Gene Sequence |
Protein sequence |