Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005324.t1 | XP_027191736.1 | 75.1 | 676 | 145 | 2 | 25 | 677 | 1 | 676 | 1.60E-300 | 1041.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005324.t1 | Q9SZL8 | 32.6 | 631 | 391 | 7 | 56 | 655 | 73 | 700 | 1.2e-94 | 349.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005324.t1 | A0A3Q7Y261 | 75.1 | 676 | 145 | 2 | 25 | 677 | 1 | 676 | 1.2e-300 | 1041.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene005324.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005324.t1 | MTR_5g015480 | 88.649 | 185 | 21 | 0 | 1 | 185 | 1 | 185 | 2.82e-110 | 333 |
MS.gene005324.t1 | MTR_0402s0040 | 67.317 | 205 | 62 | 2 | 36 | 236 | 2 | 205 | 9.44e-86 | 278 |
MS.gene005324.t1 | MTR_0402s0040 | 51.056 | 284 | 69 | 3 | 394 | 677 | 200 | 413 | 3.83e-74 | 247 |
MS.gene005324.t1 | MTR_6g017200 | 70.248 | 121 | 32 | 1 | 36 | 152 | 34 | 154 | 2.36e-49 | 169 |
MS.gene005324.t1 | MTR_2g070590 | 68.908 | 119 | 37 | 0 | 40 | 158 | 1 | 119 | 4.85e-49 | 167 |
MS.gene005324.t1 | MTR_7g113010 | 56.250 | 160 | 52 | 2 | 26 | 181 | 423 | 568 | 9.30e-45 | 169 |
MS.gene005324.t1 | MTR_1g086270 | 60.000 | 125 | 34 | 2 | 329 | 453 | 1 | 109 | 2.28e-43 | 152 |
MS.gene005324.t1 | MTR_1g057920 | 63.415 | 123 | 41 | 1 | 27 | 145 | 1 | 123 | 4.76e-43 | 151 |
MS.gene005324.t1 | MTR_0137s0040 | 68.182 | 88 | 24 | 1 | 25 | 108 | 1 | 88 | 7.27e-34 | 125 |
MS.gene005324.t1 | MTR_6g051425 | 29.252 | 294 | 164 | 6 | 63 | 315 | 24 | 314 | 1.94e-32 | 129 |
MS.gene005324.t1 | MTR_1g070355 | 30.142 | 282 | 157 | 8 | 23 | 271 | 37 | 311 | 1.32e-28 | 121 |
MS.gene005324.t1 | MTR_0558s0020 | 28.340 | 247 | 136 | 4 | 70 | 275 | 50 | 296 | 7.11e-27 | 111 |
MS.gene005324.t1 | MTR_7g074790 | 42.442 | 172 | 77 | 5 | 56 | 226 | 10 | 160 | 2.31e-26 | 108 |
MS.gene005324.t1 | MTR_1g050985 | 78.333 | 60 | 13 | 0 | 126 | 185 | 39 | 98 | 7.49e-26 | 102 |
MS.gene005324.t1 | MTR_8g446020 | 29.508 | 183 | 106 | 1 | 116 | 275 | 74 | 256 | 3.70e-24 | 102 |
MS.gene005324.t1 | MTR_4g102720 | 35.119 | 168 | 73 | 3 | 56 | 223 | 7 | 138 | 4.06e-23 | 99.0 |
MS.gene005324.t1 | MTR_0291s0060 | 63.014 | 73 | 23 | 1 | 38 | 106 | 13 | 85 | 1.80e-22 | 92.4 |
MS.gene005324.t1 | MTR_6g090505 | 30.769 | 182 | 103 | 1 | 116 | 274 | 49 | 230 | 1.58e-21 | 97.4 |
MS.gene005324.t1 | MTR_5g076070 | 28.216 | 241 | 149 | 5 | 46 | 263 | 43 | 282 | 4.43e-21 | 94.4 |
MS.gene005324.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 56 | 159 | 1.09e-20 | 92.0 |
MS.gene005324.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 56 | 159 | 1.10e-20 | 92.0 |
MS.gene005324.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 74 | 177 | 1.57e-20 | 92.0 |
MS.gene005324.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 76 | 179 | 1.61e-20 | 92.0 |
MS.gene005324.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 76 | 179 | 1.67e-20 | 92.0 |
MS.gene005324.t1 | MTR_4g035820 | 30.418 | 263 | 148 | 9 | 48 | 279 | 66 | 324 | 3.21e-20 | 95.9 |
MS.gene005324.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 116 | 219 | 4.07e-20 | 92.0 |
MS.gene005324.t1 | MTR_2g098920 | 41.228 | 114 | 61 | 3 | 56 | 165 | 80 | 191 | 5.80e-19 | 87.8 |
MS.gene005324.t1 | MTR_6g022080 | 31.818 | 154 | 102 | 2 | 62 | 213 | 91 | 243 | 2.15e-18 | 85.9 |
MS.gene005324.t1 | MTR_1g091013 | 67.857 | 56 | 18 | 0 | 69 | 124 | 14 | 69 | 9.31e-18 | 78.2 |
MS.gene005324.t1 | MTR_6g022070 | 28.736 | 174 | 119 | 1 | 329 | 502 | 1 | 169 | 6.46e-16 | 80.1 |
MS.gene005324.t1 | MTR_7g061980 | 40.336 | 119 | 67 | 3 | 50 | 167 | 4 | 119 | 7.95e-16 | 74.7 |
MS.gene005324.t1 | MTR_7g446520 | 26.531 | 245 | 140 | 4 | 59 | 280 | 91 | 318 | 9.45e-16 | 79.3 |
MS.gene005324.t1 | MTR_1g083640 | 25.221 | 226 | 128 | 4 | 62 | 246 | 57 | 282 | 3.16e-15 | 77.0 |
MS.gene005324.t1 | MTR_2g014100 | 24.607 | 191 | 126 | 3 | 62 | 234 | 50 | 240 | 5.72e-14 | 72.8 |
MS.gene005324.t1 | MTR_3g006370 | 39.048 | 105 | 62 | 2 | 56 | 159 | 50 | 153 | 1.11e-13 | 71.6 |
MS.gene005324.t1 | MTR_2g099430 | 40.909 | 88 | 50 | 1 | 80 | 167 | 27 | 112 | 1.51e-13 | 67.8 |
MS.gene005324.t1 | MTR_5g045210 | 38.202 | 89 | 55 | 0 | 566 | 654 | 20 | 108 | 2.18e-13 | 69.7 |
MS.gene005324.t1 | MTR_1g019850 | 30.488 | 164 | 104 | 3 | 34 | 194 | 45 | 201 | 5.37e-13 | 69.7 |
MS.gene005324.t1 | MTR_5g039760 | 33.333 | 180 | 91 | 6 | 60 | 237 | 14 | 166 | 5.79e-13 | 68.6 |
MS.gene005324.t1 | MTR_1g008290 | 30.345 | 145 | 88 | 3 | 108 | 244 | 3 | 142 | 1.13e-12 | 66.2 |
MS.gene005324.t1 | MTR_2g098880 | 34.351 | 131 | 80 | 4 | 56 | 182 | 73 | 201 | 2.23e-12 | 68.2 |
MS.gene005324.t1 | MTR_2g098880 | 34.351 | 131 | 80 | 4 | 56 | 182 | 61 | 189 | 2.25e-12 | 68.2 |
MS.gene005324.t1 | MTR_0337s0040 | 27.869 | 122 | 88 | 0 | 116 | 237 | 75 | 196 | 1.35e-11 | 65.1 |
MS.gene005324.t1 | MTR_0337s0060 | 28.000 | 175 | 83 | 4 | 425 | 589 | 21 | 162 | 1.97e-11 | 65.1 |
MS.gene005324.t1 | MTR_7g446480 | 30.120 | 166 | 92 | 2 | 141 | 283 | 149 | 313 | 6.30e-11 | 64.7 |
MS.gene005324.t1 | MTR_1g055240 | 26.891 | 119 | 87 | 0 | 116 | 234 | 25 | 143 | 7.01e-11 | 61.6 |
MS.gene005324.t1 | MTR_7g446510 | 28.571 | 175 | 101 | 2 | 132 | 283 | 155 | 328 | 9.10e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005324.t1 | AT4G38180 | 34.336 | 565 | 337 | 7 | 56 | 589 | 73 | 634 | 1.46e-108 | 347 |
MS.gene005324.t1 | AT4G15090 | 30.769 | 624 | 396 | 8 | 56 | 651 | 51 | 666 | 6.90e-94 | 309 |
MS.gene005324.t1 | AT4G15090 | 30.769 | 624 | 396 | 8 | 56 | 651 | 51 | 666 | 6.90e-94 | 309 |
MS.gene005324.t1 | AT4G15090 | 30.769 | 624 | 396 | 8 | 56 | 651 | 51 | 666 | 6.90e-94 | 309 |
MS.gene005324.t1 | AT4G15090 | 30.769 | 624 | 396 | 8 | 56 | 651 | 51 | 666 | 6.90e-94 | 309 |
MS.gene005324.t1 | AT4G15090 | 30.769 | 624 | 396 | 8 | 56 | 651 | 51 | 666 | 6.90e-94 | 309 |
MS.gene005324.t1 | AT3G22170 | 31.773 | 598 | 379 | 11 | 56 | 634 | 70 | 657 | 4.68e-90 | 299 |
MS.gene005324.t1 | AT3G22170 | 31.773 | 598 | 379 | 11 | 56 | 634 | 70 | 657 | 4.68e-90 | 299 |
MS.gene005324.t1 | AT1G76320 | 31.115 | 601 | 371 | 14 | 60 | 634 | 1 | 584 | 8.36e-83 | 275 |
MS.gene005324.t1 | AT1G76320 | 31.115 | 601 | 371 | 14 | 60 | 634 | 1 | 584 | 1.73e-82 | 276 |
MS.gene005324.t1 | AT1G76320 | 31.115 | 601 | 371 | 14 | 60 | 634 | 1 | 584 | 1.86e-82 | 276 |
MS.gene005324.t1 | AT1G76320 | 31.115 | 601 | 371 | 14 | 60 | 634 | 1 | 584 | 1.86e-82 | 276 |
MS.gene005324.t1 | AT2G27110 | 30.167 | 600 | 371 | 13 | 56 | 634 | 49 | 621 | 5.90e-77 | 263 |
MS.gene005324.t1 | AT2G27110 | 30.167 | 600 | 371 | 13 | 56 | 634 | 49 | 621 | 5.90e-77 | 263 |
MS.gene005324.t1 | AT2G32250 | 27.814 | 622 | 410 | 10 | 60 | 669 | 42 | 636 | 2.03e-73 | 252 |
MS.gene005324.t1 | AT2G32250 | 27.814 | 622 | 410 | 10 | 60 | 669 | 1 | 595 | 2.17e-73 | 252 |
MS.gene005324.t1 | AT2G32250 | 27.814 | 622 | 410 | 10 | 60 | 669 | 1 | 595 | 2.43e-73 | 252 |
MS.gene005324.t1 | AT2G32250 | 27.814 | 622 | 410 | 10 | 60 | 669 | 42 | 636 | 4.24e-73 | 252 |
MS.gene005324.t1 | AT2G32250 | 27.814 | 622 | 410 | 10 | 60 | 669 | 42 | 636 | 4.24e-73 | 252 |
MS.gene005324.t1 | AT2G32250 | 27.814 | 622 | 410 | 10 | 60 | 669 | 42 | 636 | 4.24e-73 | 252 |
MS.gene005324.t1 | AT2G32250 | 27.814 | 622 | 410 | 10 | 60 | 669 | 42 | 636 | 4.74e-73 | 252 |
MS.gene005324.t1 | AT2G32250 | 27.814 | 622 | 410 | 10 | 60 | 669 | 42 | 636 | 4.74e-73 | 252 |
MS.gene005324.t1 | AT1G10240 | 28.295 | 569 | 372 | 11 | 49 | 586 | 41 | 604 | 5.23e-68 | 236 |
MS.gene005324.t1 | AT1G10240 | 28.295 | 569 | 372 | 11 | 49 | 586 | 41 | 604 | 5.23e-68 | 236 |
MS.gene005324.t1 | AT5G18960 | 29.725 | 582 | 356 | 15 | 44 | 607 | 200 | 746 | 8.80e-68 | 237 |
MS.gene005324.t1 | AT5G18960 | 33.051 | 118 | 65 | 2 | 41 | 158 | 28 | 131 | 2.39e-11 | 67.8 |
MS.gene005324.t1 | AT5G18960 | 29.725 | 582 | 356 | 15 | 44 | 607 | 200 | 746 | 8.80e-68 | 237 |
MS.gene005324.t1 | AT5G18960 | 33.051 | 118 | 65 | 2 | 41 | 158 | 28 | 131 | 2.39e-11 | 67.8 |
MS.gene005324.t1 | AT3G06250 | 28.028 | 578 | 363 | 12 | 47 | 607 | 181 | 722 | 3.68e-67 | 235 |
MS.gene005324.t1 | AT3G06250 | 28.028 | 578 | 363 | 12 | 47 | 607 | 181 | 722 | 3.68e-67 | 235 |
MS.gene005324.t1 | AT3G06250 | 28.028 | 578 | 363 | 12 | 47 | 607 | 181 | 722 | 3.68e-67 | 235 |
MS.gene005324.t1 | AT2G27110 | 31.707 | 410 | 267 | 6 | 231 | 634 | 74 | 476 | 6.89e-65 | 228 |
MS.gene005324.t1 | AT4G19990 | 28.105 | 612 | 397 | 11 | 61 | 650 | 26 | 616 | 1.52e-58 | 211 |
MS.gene005324.t1 | AT4G19990 | 28.105 | 612 | 397 | 11 | 61 | 650 | 26 | 616 | 1.84e-58 | 211 |
MS.gene005324.t1 | AT4G19990 | 28.105 | 612 | 397 | 11 | 61 | 650 | 26 | 616 | 1.84e-58 | 211 |
MS.gene005324.t1 | AT4G19990 | 28.105 | 612 | 397 | 11 | 61 | 650 | 40 | 630 | 1.98e-58 | 211 |
MS.gene005324.t1 | AT4G19990 | 27.941 | 612 | 398 | 10 | 61 | 650 | 26 | 616 | 3.86e-58 | 210 |
MS.gene005324.t1 | AT4G19990 | 27.941 | 612 | 398 | 10 | 61 | 650 | 26 | 616 | 3.86e-58 | 210 |
MS.gene005324.t1 | AT4G38170 | 29.040 | 396 | 266 | 7 | 205 | 590 | 10 | 400 | 2.85e-56 | 201 |
MS.gene005324.t1 | AT5G28530 | 24.760 | 626 | 416 | 12 | 56 | 637 | 55 | 669 | 1.59e-55 | 201 |
MS.gene005324.t1 | AT5G28530 | 25.000 | 632 | 403 | 13 | 56 | 637 | 55 | 665 | 1.85e-55 | 201 |
MS.gene005324.t1 | AT5G28530 | 25.000 | 632 | 403 | 13 | 56 | 637 | 55 | 665 | 1.85e-55 | 201 |
MS.gene005324.t1 | AT1G80010 | 27.787 | 583 | 356 | 13 | 56 | 589 | 95 | 661 | 3.10e-54 | 198 |
MS.gene005324.t1 | AT1G52520 | 27.660 | 564 | 368 | 16 | 54 | 587 | 83 | 636 | 4.96e-53 | 194 |
MS.gene005324.t1 | AT4G19990 | 27.336 | 578 | 377 | 10 | 95 | 650 | 3 | 559 | 1.16e-50 | 187 |
MS.gene005324.t1 | AT5G28530 | 24.558 | 566 | 373 | 13 | 56 | 609 | 55 | 578 | 1.54e-42 | 163 |
MS.gene005324.t1 | AT5G28530 | 24.825 | 572 | 360 | 14 | 56 | 609 | 55 | 574 | 2.14e-42 | 163 |
MS.gene005324.t1 | AT3G59470 | 46.226 | 106 | 55 | 2 | 56 | 161 | 70 | 173 | 2.46e-21 | 94.4 |
MS.gene005324.t1 | AT3G59470 | 46.226 | 106 | 55 | 2 | 56 | 161 | 70 | 173 | 2.46e-21 | 94.4 |
MS.gene005324.t1 | AT3G59470 | 46.226 | 106 | 55 | 2 | 56 | 161 | 82 | 185 | 3.54e-21 | 94.4 |
MS.gene005324.t1 | AT3G07500 | 38.760 | 129 | 76 | 2 | 34 | 160 | 9 | 136 | 2.22e-15 | 76.3 |
MS.gene005324.t1 | AT2G43280 | 37.500 | 128 | 71 | 4 | 56 | 181 | 22 | 142 | 7.11e-14 | 71.6 |
MS.gene005324.t1 | AT4G12850 | 32.540 | 126 | 78 | 3 | 56 | 181 | 11 | 129 | 2.31e-12 | 65.5 |
MS.gene005324.t1 | AT2G43280 | 40.659 | 91 | 50 | 3 | 71 | 159 | 2 | 90 | 1.37e-11 | 63.9 |
MS.gene005324.t1 | AT4G12850 | 34.951 | 103 | 63 | 2 | 56 | 158 | 11 | 109 | 2.81e-11 | 62.4 |
MS.gene005324.t1 | AT4G12850 | 34.951 | 103 | 63 | 2 | 56 | 158 | 11 | 109 | 9.02e-11 | 62.0 |
Find 113 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCAAATAACAAACATATTT+TGG | 0.063618 | 1.1:-62466336 | MS.gene005324:CDS |
CACAGACAAACAATTGTTTA+TGG | 0.199392 | 1.1:-62466196 | MS.gene005324:CDS |
TTGTTTGTCTGTGGCTATTA+AGG | 0.202792 | 1.1:+62466206 | None:intergenic |
ATTCATCAGCCAATACAATT+TGG | 0.204201 | 1.1:+62466572 | None:intergenic |
GCACAAATGATAAATGATTA+TGG | 0.212778 | 1.1:-62466307 | MS.gene005324:CDS |
CACAATCCATGAAATGTTTC+TGG | 0.237682 | 1.1:+62466031 | None:intergenic |
GAAATTTGCTTCGCACTAAA+AGG | 0.249768 | 1.1:-62466462 | MS.gene005324:CDS |
GGTTGGGATGTAATCAAAAT+TGG | 0.250331 | 1.1:-62465277 | MS.gene005324:CDS |
GATTGTGCACTTGGCATATA+AGG | 0.257928 | 1.1:-62466015 | MS.gene005324:CDS |
TGGACATAAAAGCTCATTTC+AGG | 0.266817 | 1.1:-62465235 | MS.gene005324:CDS |
ACAAATTCATGAAAATCTTT+TGG | 0.298226 | 1.1:+62466538 | None:intergenic |
ATTGTATTGGCTGATGAATC+TGG | 0.322531 | 1.1:-62466568 | MS.gene005324:CDS |
ATGAGACTCTTCATAAACTT+TGG | 0.330181 | 1.1:+62465130 | None:intergenic |
CATTTCATGGATTGTGCACT+TGG | 0.334162 | 1.1:-62466024 | MS.gene005324:CDS |
TAGTGCGAAGCAAATTTCTA+TGG | 0.349224 | 1.1:+62466467 | None:intergenic |
GACATTCCTCATATTCATCT+TGG | 0.362108 | 1.1:+62465531 | None:intergenic |
TCTTGGAGTGTAAACATTGC+CGG | 0.362313 | 1.1:+62465568 | None:intergenic |
TGAGACTCTTCATAAACTTT+GGG | 0.365433 | 1.1:+62465131 | None:intergenic |
ACAGACAAACAATTGTTTAT+GGG | 0.367661 | 1.1:-62466195 | MS.gene005324:CDS |
TATAGTAGGAAATGTGGTTT+TGG | 0.369598 | 1.1:-62466886 | MS.gene005324:CDS |
TTCATCAGCCAATACAATTT+GGG | 0.375471 | 1.1:+62466573 | None:intergenic |
GAAAGGGGAACATATTGAAT+TGG | 0.379587 | 1.1:-62465255 | MS.gene005324:CDS |
TCAAATAACCATTGAAAAGA+AGG | 0.380370 | 1.1:+62466145 | None:intergenic |
GGTGAATGATATCGTGCAAC+AGG | 0.381657 | 1.1:-62466992 | MS.gene005324:CDS |
TCACCGTTCATCACCACCTC+TGG | 0.383906 | 1.1:-62467207 | MS.gene005324:CDS |
CCCACCCATTGCTTTGAGAA+AGG | 0.392844 | 1.1:+62466120 | None:intergenic |
ATTTCACTTGATCGGAAGAT+TGG | 0.399360 | 1.1:-62466703 | MS.gene005324:CDS |
GTCATGCCAGAAACATTTCA+TGG | 0.400517 | 1.1:-62466037 | MS.gene005324:CDS |
GACACCGCGTCTACCCTCTT+TGG | 0.402002 | 1.1:+62466795 | None:intergenic |
CACAAATGATAAATGATTAT+GGG | 0.407470 | 1.1:-62466306 | MS.gene005324:CDS |
ATAGATGATTCACATGCCTT+AGG | 0.411459 | 1.1:+62465984 | None:intergenic |
TAATGTACCACACTTGGAAA+TGG | 0.430430 | 1.1:-62466950 | MS.gene005324:CDS |
TACACCTTCAACCATTGGAT+TGG | 0.436578 | 1.1:+62467023 | None:intergenic |
AACAGGATGTTTAGCAGGTA+TGG | 0.436611 | 1.1:-62466728 | MS.gene005324:CDS |
ATCATTTATCATTTGTGCAT+CGG | 0.444064 | 1.1:+62466312 | None:intergenic |
ACGTGTGTCGTTTCTACCAT+TGG | 0.448381 | 1.1:+62467248 | None:intergenic |
TGTTTAAGAAATTTGAAAGA+AGG | 0.449252 | 1.1:-62465500 | MS.gene005324:CDS |
TAGATGATTCACATGCCTTA+GGG | 0.455627 | 1.1:+62465985 | None:intergenic |
GAAACCTTTCTCAAAGCAAT+GGG | 0.457265 | 1.1:-62466124 | MS.gene005324:CDS |
TGCATCTTGATCTGTTAGAA+TGG | 0.469730 | 1.1:+62466084 | None:intergenic |
GAATTTGTGTCAAAACAAGC+TGG | 0.470933 | 1.1:-62466523 | MS.gene005324:CDS |
GGAGTTTGAGTCTGAGGCCT+TGG | 0.475074 | 1.1:-62466929 | MS.gene005324:CDS |
TGAAACCTTTCTCAAAGCAA+TGG | 0.476564 | 1.1:-62466125 | MS.gene005324:CDS |
GTTTAAGAAATTTGAAAGAA+GGG | 0.482494 | 1.1:-62465499 | MS.gene005324:CDS |
ATAAATGATTATGGGTACTT+TGG | 0.482723 | 1.1:-62466298 | MS.gene005324:CDS |
GGAATTCCAAGATGAATATG+AGG | 0.483458 | 1.1:-62465537 | MS.gene005324:CDS |
AATAAGAATTATCGTCCGTT+GGG | 0.484650 | 1.1:-62466241 | MS.gene005324:CDS |
CTTCACCATACCTTAGTGAA+TGG | 0.485222 | 1.1:+62466437 | None:intergenic |
CAAATAACCATTGAAAAGAA+GGG | 0.495588 | 1.1:+62466146 | None:intergenic |
ACAAGCATCCCAAATTGTAT+TGG | 0.495869 | 1.1:-62466581 | MS.gene005324:CDS |
GATGTAATCAAAATTGGAAA+GGG | 0.496181 | 1.1:-62465271 | MS.gene005324:CDS |
TCTATGGATGGAGAGTCAAT+TGG | 0.511024 | 1.1:-62465077 | MS.gene005324:CDS |
ACTAGAACAGGATGTTTAGC+AGG | 0.515632 | 1.1:-62466733 | MS.gene005324:CDS |
CACCGTTCATCACCACCTCT+GGG | 0.518896 | 1.1:-62467206 | MS.gene005324:CDS |
TTGCCGGCTTGTACAAGCAT+AGG | 0.519591 | 1.1:+62465584 | None:intergenic |
ATCCCTATGCTTGTACAAGC+CGG | 0.521377 | 1.1:-62465587 | MS.gene005324:CDS |
ATTGTGCACTTGGCATATAA+GGG | 0.522000 | 1.1:-62466014 | MS.gene005324:CDS |
ATCATATAAACATACTCAGC+TGG | 0.522562 | 1.1:+62466631 | None:intergenic |
GATAGTAGTAGCGAATCATA+TGG | 0.523742 | 1.1:-62465438 | MS.gene005324:CDS |
TTGGACAAGAGATGCAAGGT+TGG | 0.524873 | 1.1:-62465294 | MS.gene005324:CDS |
CATACTCAGCTGGCAGAAGA+AGG | 0.525063 | 1.1:+62466641 | None:intergenic |
AAATAAGAATTATCGTCCGT+TGG | 0.526037 | 1.1:-62466242 | MS.gene005324:CDS |
TGGACAAGAGATGCAAGGTT+GGG | 0.530700 | 1.1:-62465293 | MS.gene005324:CDS |
ACATCCAATCCAATGGTTGA+AGG | 0.531051 | 1.1:-62467027 | MS.gene005324:CDS |
GATTCAAGGGAAAATGGGCA+TGG | 0.535225 | 1.1:-62465820 | MS.gene005324:CDS |
GCTCGAGCAGAAACTAGAAC+AGG | 0.536024 | 1.1:-62466745 | MS.gene005324:CDS |
GTATGGTTATTTCACTTGAT+CGG | 0.538559 | 1.1:-62466711 | MS.gene005324:CDS |
TCAAGATGCAGCAATGGCTA+AGG | 0.541612 | 1.1:-62466071 | MS.gene005324:CDS |
CAGACAAACAATTGTTTATG+GGG | 0.542243 | 1.1:-62466194 | MS.gene005324:CDS |
ACGTGATTACTTAACAAAAG+AGG | 0.543276 | 1.1:-62466767 | MS.gene005324:CDS |
AATTTGTGTCAAAACAAGCT+GGG | 0.543407 | 1.1:-62466522 | MS.gene005324:CDS |
AGCAATATATACTAAAACGT+TGG | 0.545983 | 1.1:-62465313 | MS.gene005324:CDS |
ATAATGTTTCTAAAGACTCA+TGG | 0.548211 | 1.1:-62465859 | MS.gene005324:CDS |
GGAAATGGAGTTTGAGTCTG+AGG | 0.549669 | 1.1:-62466935 | MS.gene005324:CDS |
AATGAGTATAGTAGGAAATG+TGG | 0.549866 | 1.1:-62466892 | MS.gene005324:CDS |
ACCTTTCTCAAAGCAATGGG+TGG | 0.552305 | 1.1:-62466121 | MS.gene005324:CDS |
GGATGTAATCAAAATTGGAA+AGG | 0.552421 | 1.1:-62465272 | MS.gene005324:CDS |
TCGGAAGATTGGAAAATACA+AGG | 0.556421 | 1.1:-62466692 | MS.gene005324:CDS |
AGGAACCATTCACTAAGGTA+TGG | 0.558908 | 1.1:-62466442 | MS.gene005324:CDS |
TGTTAGTAATGTACCACACT+TGG | 0.560348 | 1.1:-62466956 | MS.gene005324:CDS |
TTGCTCAATTTAACTGCTCG+AGG | 0.564353 | 1.1:+62465191 | None:intergenic |
ATCTTACCGGTGCCCAGAGG+TGG | 0.565589 | 1.1:+62467194 | None:intergenic |
ATTATAAAATTCATATGCCA+AGG | 0.568982 | 1.1:+62466912 | None:intergenic |
AACAGATCAAGATGCAGCAA+TGG | 0.573110 | 1.1:-62466077 | MS.gene005324:CDS |
ATTCTTATTTGTCTTGAATG+TGG | 0.574010 | 1.1:+62466255 | None:intergenic |
TGCCGGCTTGTACAAGCATA+GGG | 0.574909 | 1.1:+62465585 | None:intergenic |
TCATCACCACCTCTGGGCAC+CGG | 0.577571 | 1.1:-62467200 | MS.gene005324:intron |
GTGCGAAAGACTTTCACTGC+AGG | 0.578283 | 1.1:-62465791 | MS.gene005324:CDS |
TGTCGAAAGTTTGAGACACA+TGG | 0.578537 | 1.1:-62465395 | MS.gene005324:CDS |
CATAAACAATTGTTTGTCTG+TGG | 0.584673 | 1.1:+62466197 | None:intergenic |
ATTCAAGGGAAAATGGGCAT+GGG | 0.587348 | 1.1:-62465819 | MS.gene005324:CDS |
TGCCCAGAGGTGGTGATGAA+CGG | 0.588261 | 1.1:+62467204 | None:intergenic |
CTAAAAGGAACCATTCACTA+AGG | 0.588493 | 1.1:-62466447 | MS.gene005324:CDS |
AAAGAGTTGTCAACGGAAAG+CGG | 0.589356 | 1.1:-62465673 | MS.gene005324:CDS |
AAAATTTGTGTGCTCCAAAG+AGG | 0.589431 | 1.1:-62466809 | MS.gene005324:CDS |
CACTTTGAAAGAGTTGTCAA+CGG | 0.610932 | 1.1:-62465680 | MS.gene005324:CDS |
CCTTTCTCAAAGCAATGGGT+GGG | 0.612770 | 1.1:-62466120 | MS.gene005324:CDS |
ATGTAATCAAAATTGGAAAG+GGG | 0.613707 | 1.1:-62465270 | MS.gene005324:CDS |
ATGCATTGATCTACACGAAG+AGG | 0.614015 | 1.1:-62465924 | MS.gene005324:CDS |
GAATATTACATCCAATCCAA+TGG | 0.614280 | 1.1:-62467034 | MS.gene005324:CDS |
AAATTTGTGTGCTCCAAAGA+GGG | 0.614397 | 1.1:-62466808 | MS.gene005324:CDS |
ATTTGTGTCAAAACAAGCTG+GGG | 0.616608 | 1.1:-62466521 | MS.gene005324:CDS |
CAAGGTTATTGACTTTGTAG+CGG | 0.620198 | 1.1:-62466674 | MS.gene005324:CDS |
AACGTTGGACAAGAGATGCA+AGG | 0.629157 | 1.1:-62465298 | MS.gene005324:CDS |
TACAAATTATGATAACAGCA+AGG | 0.637062 | 1.1:-62465465 | MS.gene005324:CDS |
TCAAACTCCATTTCCAAGTG+TGG | 0.642402 | 1.1:+62466943 | None:intergenic |
ATATAAGGGAAAATGCCCTA+AGG | 0.647376 | 1.1:-62466000 | MS.gene005324:CDS |
AGGCTAACAAATACTCCCAA+CGG | 0.653067 | 1.1:+62466226 | None:intergenic |
TGCTCCAAAGAGGGTAGACG+CGG | 0.660484 | 1.1:-62466799 | MS.gene005324:CDS |
GTGAATGATATCGTGCAACA+GGG | 0.667513 | 1.1:-62466991 | MS.gene005324:CDS |
ATTATGATAACAGCAAGGAG+CGG | 0.694152 | 1.1:-62465460 | MS.gene005324:CDS |
TTTGTGTCAAAACAAGCTGG+GGG | 0.697793 | 1.1:-62466520 | MS.gene005324:CDS |
AAAATCTTACCGGTGCCCAG+AGG | 0.742952 | 1.1:+62467191 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTATAATGAGTATAGT+AGG | - | chr1.1:62465376-62465395 | MS.gene005324:CDS | 15.0% |
!! | ATCAATTGCAAATGAAAAAA+AGG | - | chr1.1:62467240-62467259 | MS.gene005324:CDS | 20.0% |
!! | ATTATAAAATTCATATGCCA+AGG | + | chr1.1:62465367-62465386 | None:intergenic | 20.0% |
!! | CACAAATGATAAATGATTAT+GGG | - | chr1.1:62465970-62465989 | MS.gene005324:CDS | 20.0% |
!! | GTTTAAGAAATTTGAAAGAA+GGG | - | chr1.1:62466777-62466796 | MS.gene005324:CDS | 20.0% |
!! | TATTCACATTATCTAGAAAA+TGG | + | chr1.1:62465227-62465246 | None:intergenic | 20.0% |
!! | TGTTTAAGAAATTTGAAAGA+AGG | - | chr1.1:62466776-62466795 | MS.gene005324:CDS | 20.0% |
!!! | ACAAATTCATGAAAATCTTT+TGG | + | chr1.1:62465741-62465760 | None:intergenic | 20.0% |
!!! | AGCAAATAACAAACATATTT+TGG | - | chr1.1:62465940-62465959 | MS.gene005324:CDS | 20.0% |
!!! | ATCTTTTTCATTTTCAATCT+TGG | + | chr1.1:62466671-62466690 | None:intergenic | 20.0% |
!!! | CATAATATTTTTCGATTCAA+GGG | - | chr1.1:62466443-62466462 | MS.gene005324:CDS | 20.0% |
!!! | CATGAATATTTGAAAGTATT+TGG | - | chr1.1:62465139-62465158 | MS.gene005324:CDS | 20.0% |
!!! | GCAAATAACAAACATATTTT+GGG | - | chr1.1:62465941-62465960 | MS.gene005324:CDS | 20.0% |
! | ACAGACAAACAATTGTTTAT+GGG | - | chr1.1:62466081-62466100 | MS.gene005324:CDS | 25.0% |
! | AGCAATATATACTAAAACGT+TGG | - | chr1.1:62466963-62466982 | MS.gene005324:CDS | 25.0% |
! | ATAAATGATTATGGGTACTT+TGG | - | chr1.1:62465978-62465997 | MS.gene005324:CDS | 25.0% |
! | ATCATTTATCATTTGTGCAT+CGG | + | chr1.1:62465967-62465986 | None:intergenic | 25.0% |
! | ATGTAATCAAAATTGGAAAG+GGG | - | chr1.1:62467006-62467025 | MS.gene005324:CDS | 25.0% |
! | CAAATAACCATTGAAAAGAA+GGG | + | chr1.1:62466133-62466152 | None:intergenic | 25.0% |
! | CCTTGAATCGAAAAATATTA+TGG | + | chr1.1:62466445-62466464 | None:intergenic | 25.0% |
! | GATGTAATCAAAATTGGAAA+GGG | - | chr1.1:62467005-62467024 | MS.gene005324:CDS | 25.0% |
! | GCAAATAAAAGCAAAAAAGA+TGG | - | chr1.1:62465429-62465448 | MS.gene005324:CDS | 25.0% |
! | GCACAAATGATAAATGATTA+TGG | - | chr1.1:62465969-62465988 | MS.gene005324:CDS | 25.0% |
! | TACAAATTATGATAACAGCA+AGG | - | chr1.1:62466811-62466830 | MS.gene005324:CDS | 25.0% |
! | TCAAATAACCATTGAAAAGA+AGG | + | chr1.1:62466134-62466153 | None:intergenic | 25.0% |
! | TGAAACTCATAAAAGAATGA+AGG | + | chr1.1:62465906-62465925 | None:intergenic | 25.0% |
!! | ATAATGTTTCTAAAGACTCA+TGG | - | chr1.1:62466417-62466436 | MS.gene005324:intron | 25.0% |
!! | ATTCTTATTTGTCTTGAATG+TGG | + | chr1.1:62466024-62466043 | None:intergenic | 25.0% |
!! | ATTCTTTTATGAGTTTCAGA+TGG | - | chr1.1:62465908-62465927 | MS.gene005324:CDS | 25.0% |
!!! | AAGAAGAATTTTTTAGTGGA+TGG | - | chr1.1:62466375-62466394 | MS.gene005324:intron | 25.0% |
!!! | AGAAGAATTTTTTAGTGGAT+GGG | - | chr1.1:62466376-62466395 | MS.gene005324:intron | 25.0% |
!!! | CCATAATATTTTTCGATTCA+AGG | - | chr1.1:62466442-62466461 | MS.gene005324:CDS | 25.0% |
!!! | TTTTATTTGCATATTCTCGA+CGG | + | chr1.1:62465419-62465438 | None:intergenic | 25.0% |
AAATAAGAATTATCGTCCGT+TGG | - | chr1.1:62466034-62466053 | MS.gene005324:CDS | 30.0% | |
AATAAGAATTATCGTCCGTT+GGG | - | chr1.1:62466035-62466054 | MS.gene005324:CDS | 30.0% | |
AATGAGTATAGTAGGAAATG+TGG | - | chr1.1:62465384-62465403 | MS.gene005324:CDS | 30.0% | |
AATTTGTGTCAAAACAAGCT+GGG | - | chr1.1:62465754-62465773 | MS.gene005324:CDS | 30.0% | |
ACGTGATTACTTAACAAAAG+AGG | - | chr1.1:62465509-62465528 | MS.gene005324:CDS | 30.0% | |
ATCATATAAACATACTCAGC+TGG | + | chr1.1:62465648-62465667 | None:intergenic | 30.0% | |
ATGAGACTCTTCATAAACTT+TGG | + | chr1.1:62467149-62467168 | None:intergenic | 30.0% | |
ATTCATCAGCCAATACAATT+TGG | + | chr1.1:62465707-62465726 | None:intergenic | 30.0% | |
CACAGACAAACAATTGTTTA+TGG | - | chr1.1:62466080-62466099 | MS.gene005324:CDS | 30.0% | |
CAGACAAACAATTGTTTATG+GGG | - | chr1.1:62466082-62466101 | MS.gene005324:CDS | 30.0% | |
CATAAACAATTGTTTGTCTG+TGG | + | chr1.1:62466082-62466101 | None:intergenic | 30.0% | |
GAATATTACATCCAATCCAA+TGG | - | chr1.1:62465242-62465261 | MS.gene005324:CDS | 30.0% | |
GACAAAGAACAAAATCTTAC+CGG | + | chr1.1:62465098-62465117 | None:intergenic | 30.0% | |
GGATGTAATCAAAATTGGAA+AGG | - | chr1.1:62467004-62467023 | MS.gene005324:CDS | 30.0% | |
TGAGACTCTTCATAAACTTT+GGG | + | chr1.1:62467148-62467167 | None:intergenic | 30.0% | |
TGGAATTCCTCAAAAATTCT+TGG | + | chr1.1:62466728-62466747 | None:intergenic | 30.0% | |
TTCATCAGCCAATACAATTT+GGG | + | chr1.1:62465706-62465725 | None:intergenic | 30.0% | |
! | AAACAATCCCTTCTTTTCAA+TGG | - | chr1.1:62466123-62466142 | MS.gene005324:CDS | 30.0% |
! | GTATGGTTATTTCACTTGAT+CGG | - | chr1.1:62465565-62465584 | MS.gene005324:CDS | 30.0% |
! | TATAGTAGGAAATGTGGTTT+TGG | - | chr1.1:62465390-62465409 | MS.gene005324:CDS | 30.0% |
! | TATGCTGACTAAAAAGTCTA+TGG | - | chr1.1:62467183-62467202 | MS.gene005324:intron | 30.0% |
! | TGATCTGTTAGAATGGTTTT+AGG | + | chr1.1:62466188-62466207 | None:intergenic | 30.0% |
! | TTACACTCCAAGAATTTTTG+AGG | - | chr1.1:62466718-62466737 | MS.gene005324:CDS | 30.0% |
! | TTTTCGATTCAAGGGAAAAT+GGG | - | chr1.1:62466451-62466470 | MS.gene005324:CDS | 30.0% |
!! | CGTTTTAGTATATATTGCTG+AGG | + | chr1.1:62466962-62466981 | None:intergenic | 30.0% |
!! | TTTTTCGATTCAAGGGAAAA+TGG | - | chr1.1:62466450-62466469 | MS.gene005324:CDS | 30.0% |
!!! | GAGGAAGAAGAATTTTTTAG+TGG | - | chr1.1:62466371-62466390 | MS.gene005324:intron | 30.0% |
AAAATTTGTGTGCTCCAAAG+AGG | - | chr1.1:62465467-62465486 | MS.gene005324:CDS | 35.0% | |
AAATTTGTGTGCTCCAAAGA+GGG | - | chr1.1:62465468-62465487 | MS.gene005324:CDS | 35.0% | |
ACAAGCATCCCAAATTGTAT+TGG | - | chr1.1:62465695-62465714 | MS.gene005324:CDS | 35.0% | |
ATAGATGATTCACATGCCTT+AGG | + | chr1.1:62466295-62466314 | None:intergenic | 35.0% | |
ATATAAGGGAAAATGCCCTA+AGG | - | chr1.1:62466276-62466295 | MS.gene005324:CDS | 35.0% | |
ATTATGATAACAGCAAGGAG+CGG | - | chr1.1:62466816-62466835 | MS.gene005324:CDS | 35.0% | |
ATTGTGCACTTGGCATATAA+GGG | - | chr1.1:62466262-62466281 | MS.gene005324:CDS | 35.0% | |
ATTTCACTTGATCGGAAGAT+TGG | - | chr1.1:62465573-62465592 | MS.gene005324:CDS | 35.0% | |
ATTTGTGTCAAAACAAGCTG+GGG | - | chr1.1:62465755-62465774 | MS.gene005324:CDS | 35.0% | |
CACAATCCATGAAATGTTTC+TGG | + | chr1.1:62466248-62466267 | None:intergenic | 35.0% | |
CTAAAAGGAACCATTCACTA+AGG | - | chr1.1:62465829-62465848 | MS.gene005324:CDS | 35.0% | |
CTGACTAAAAAGTCTATGGA+TGG | - | chr1.1:62467187-62467206 | MS.gene005324:intron | 35.0% | |
GAAACCTTTCTCAAAGCAAT+GGG | - | chr1.1:62466152-62466171 | MS.gene005324:CDS | 35.0% | |
GAAAGGGGAACATATTGAAT+TGG | - | chr1.1:62467021-62467040 | MS.gene005324:CDS | 35.0% | |
GAATTTGTGTCAAAACAAGC+TGG | - | chr1.1:62465753-62465772 | MS.gene005324:CDS | 35.0% | |
GACATTCCTCATATTCATCT+TGG | + | chr1.1:62466748-62466767 | None:intergenic | 35.0% | |
GATAGTAGTAGCGAATCATA+TGG | - | chr1.1:62466838-62466857 | MS.gene005324:CDS | 35.0% | |
GGAATTCCAAGATGAATATG+AGG | - | chr1.1:62466739-62466758 | MS.gene005324:CDS | 35.0% | |
GGTTGGGATGTAATCAAAAT+TGG | - | chr1.1:62466999-62467018 | MS.gene005324:CDS | 35.0% | |
TAATGTACCACACTTGGAAA+TGG | - | chr1.1:62465326-62465345 | MS.gene005324:CDS | 35.0% | |
TAGATGATTCACATGCCTTA+GGG | + | chr1.1:62466294-62466313 | None:intergenic | 35.0% | |
TAGTGCGAAGCAAATTTCTA+TGG | + | chr1.1:62465812-62465831 | None:intergenic | 35.0% | |
TCGGAAGATTGGAAAATACA+AGG | - | chr1.1:62465584-62465603 | MS.gene005324:CDS | 35.0% | |
TGAAACCTTTCTCAAAGCAA+TGG | - | chr1.1:62466151-62466170 | MS.gene005324:CDS | 35.0% | |
TGCATCTTGATCTGTTAGAA+TGG | + | chr1.1:62466195-62466214 | None:intergenic | 35.0% | |
TGGACATAAAAGCTCATTTC+AGG | - | chr1.1:62467041-62467060 | MS.gene005324:CDS | 35.0% | |
TGTTAGTAATGTACCACACT+TGG | - | chr1.1:62465320-62465339 | MS.gene005324:CDS | 35.0% | |
TTGTTTGTCTGTGGCTATTA+AGG | + | chr1.1:62466073-62466092 | None:intergenic | 35.0% | |
! | CACTTTGAAAGAGTTGTCAA+CGG | - | chr1.1:62466596-62466615 | MS.gene005324:CDS | 35.0% |
! | GAAATTTGCTTCGCACTAAA+AGG | - | chr1.1:62465814-62465833 | MS.gene005324:CDS | 35.0% |
! | GGTTGAAGGTGTAGAAAAAT+TGG | - | chr1.1:62465263-62465282 | MS.gene005324:CDS | 35.0% |
! | TTTTCTACACCTTCAACCAT+TGG | + | chr1.1:62465261-62465280 | None:intergenic | 35.0% |
!! | ATTGTATTGGCTGATGAATC+TGG | - | chr1.1:62465708-62465727 | MS.gene005324:CDS | 35.0% |
!! | CAAGGTTATTGACTTTGTAG+CGG | - | chr1.1:62465602-62465621 | MS.gene005324:CDS | 35.0% |
!!! | AGAATTTTTTAGTGGATGGG+AGG | - | chr1.1:62466379-62466398 | MS.gene005324:intron | 35.0% |
AAAGAGTTGTCAACGGAAAG+CGG | - | chr1.1:62466603-62466622 | MS.gene005324:CDS | 40.0% | |
AACAGATCAAGATGCAGCAA+TGG | - | chr1.1:62466199-62466218 | MS.gene005324:CDS | 40.0% | |
AACAGGATGTTTAGCAGGTA+TGG | - | chr1.1:62465548-62465567 | MS.gene005324:CDS | 40.0% | |
ACATCCAATCCAATGGTTGA+AGG | - | chr1.1:62465249-62465268 | MS.gene005324:CDS | 40.0% | |
ACTAGAACAGGATGTTTAGC+AGG | - | chr1.1:62465543-62465562 | MS.gene005324:CDS | 40.0% | |
AGGAACCATTCACTAAGGTA+TGG | - | chr1.1:62465834-62465853 | MS.gene005324:CDS | 40.0% | |
AGGCTAACAAATACTCCCAA+CGG | + | chr1.1:62466053-62466072 | None:intergenic | 40.0% | |
ATTCAAGGGAAAATGGGCAT+GGG | - | chr1.1:62466457-62466476 | MS.gene005324:CDS | 40.0% | |
CTTCACCATACCTTAGTGAA+TGG | + | chr1.1:62465842-62465861 | None:intergenic | 40.0% | |
GATTGTGCACTTGGCATATA+AGG | - | chr1.1:62466261-62466280 | MS.gene005324:CDS | 40.0% | |
GTCATGCCAGAAACATTTCA+TGG | - | chr1.1:62466239-62466258 | MS.gene005324:CDS | 40.0% | |
GTGAATGATATCGTGCAACA+GGG | - | chr1.1:62465285-62465304 | MS.gene005324:CDS | 40.0% | |
TACACCTTCAACCATTGGAT+TGG | + | chr1.1:62465256-62465275 | None:intergenic | 40.0% | |
TCAAACTCCATTTCCAAGTG+TGG | + | chr1.1:62465336-62465355 | None:intergenic | 40.0% | |
TCACTAAGGTATGGTGAAGT+AGG | - | chr1.1:62465843-62465862 | MS.gene005324:CDS | 40.0% | |
TCTATGGATGGAGAGTCAAT+TGG | - | chr1.1:62467199-62467218 | MS.gene005324:intron | 40.0% | |
TCTTGGAGTGTAAACATTGC+CGG | + | chr1.1:62466711-62466730 | None:intergenic | 40.0% | |
TTGCTCAATTTAACTGCTCG+AGG | + | chr1.1:62467088-62467107 | None:intergenic | 40.0% | |
TTTGTGTCAAAACAAGCTGG+GGG | - | chr1.1:62465756-62465775 | MS.gene005324:CDS | 40.0% | |
! | ATGCATTGATCTACACGAAG+AGG | - | chr1.1:62466352-62466371 | MS.gene005324:CDS | 40.0% |
! | CATTTCATGGATTGTGCACT+TGG | - | chr1.1:62466252-62466271 | MS.gene005324:CDS | 40.0% |
! | TGTCGAAAGTTTGAGACACA+TGG | - | chr1.1:62466881-62466900 | MS.gene005324:CDS | 40.0% |
AACGTTGGACAAGAGATGCA+AGG | - | chr1.1:62466978-62466997 | MS.gene005324:CDS | 45.0% | |
ACCTTTCTCAAAGCAATGGG+TGG | - | chr1.1:62466155-62466174 | MS.gene005324:CDS | 45.0% | |
ATCCCTATGCTTGTACAAGC+CGG | - | chr1.1:62466689-62466708 | MS.gene005324:CDS | 45.0% | |
CCTTTCTCAAAGCAATGGGT+GGG | - | chr1.1:62466156-62466175 | MS.gene005324:CDS | 45.0% | |
GATTCAAGGGAAAATGGGCA+TGG | - | chr1.1:62466456-62466475 | MS.gene005324:CDS | 45.0% | |
GCTGGGGGAATAAACAATGT+TGG | - | chr1.1:62465771-62465790 | MS.gene005324:CDS | 45.0% | |
GGAAATGGAGTTTGAGTCTG+AGG | - | chr1.1:62465341-62465360 | MS.gene005324:CDS | 45.0% | |
GGTGAATGATATCGTGCAAC+AGG | - | chr1.1:62465284-62465303 | MS.gene005324:CDS | 45.0% | |
TCAAGATGCAGCAATGGCTA+AGG | - | chr1.1:62466205-62466224 | MS.gene005324:CDS | 45.0% | |
TGGACAAGAGATGCAAGGTT+GGG | - | chr1.1:62466983-62467002 | MS.gene005324:CDS | 45.0% | |
TTGGACAAGAGATGCAAGGT+TGG | - | chr1.1:62466982-62467001 | MS.gene005324:CDS | 45.0% | |
AAAATCTTACCGGTGCCCAG+AGG | + | chr1.1:62465088-62465107 | None:intergenic | 50.0% | |
CATACTCAGCTGGCAGAAGA+AGG | + | chr1.1:62465638-62465657 | None:intergenic | 50.0% | |
GCTCGAGCAGAAACTAGAAC+AGG | - | chr1.1:62465531-62465550 | MS.gene005324:CDS | 50.0% | |
GTGCGAAAGACTTTCACTGC+AGG | - | chr1.1:62466485-62466504 | MS.gene005324:CDS | 50.0% | |
!! | CCCACCCATTGCTTTGAGAA+AGG | + | chr1.1:62466159-62466178 | None:intergenic | 50.0% |
!! | TGCCGGCTTGTACAAGCATA+GGG | + | chr1.1:62466694-62466713 | None:intergenic | 50.0% |
!! | TTGCCGGCTTGTACAAGCAT+AGG | + | chr1.1:62466695-62466714 | None:intergenic | 50.0% |
CACCGTTCATCACCACCTCT+GGG | - | chr1.1:62465070-62465089 | MS.gene005324:CDS | 55.0% | |
TCACCGTTCATCACCACCTC+TGG | - | chr1.1:62465069-62465088 | MS.gene005324:CDS | 55.0% | |
TGCTCCAAAGAGGGTAGACG+CGG | - | chr1.1:62465477-62465496 | MS.gene005324:CDS | 55.0% | |
! | GGAGTTTGAGTCTGAGGCCT+TGG | - | chr1.1:62465347-62465366 | MS.gene005324:CDS | 55.0% |
! | TGCCCAGAGGTGGTGATGAA+CGG | + | chr1.1:62465075-62465094 | None:intergenic | 55.0% |
ATCTTACCGGTGCCCAGAGG+TGG | + | chr1.1:62465085-62465104 | None:intergenic | 60.0% | |
GACACCGCGTCTACCCTCTT+TGG | + | chr1.1:62465484-62465503 | None:intergenic | 60.0% | |
TCATCACCACCTCTGGGCAC+CGG | - | chr1.1:62465076-62465095 | MS.gene005324:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 62465031 | 62467267 | 62465031 | ID=MS.gene005324 |
chr1.1 | mRNA | 62465031 | 62467267 | 62465031 | ID=MS.gene005324.t1;Parent=MS.gene005324 |
chr1.1 | exon | 62467201 | 62467267 | 62467201 | ID=MS.gene005324.t1.exon1;Parent=MS.gene005324.t1 |
chr1.1 | CDS | 62467201 | 62467267 | 62467201 | ID=cds.MS.gene005324.t1;Parent=MS.gene005324.t1 |
chr1.1 | exon | 62466438 | 62467063 | 62466438 | ID=MS.gene005324.t1.exon2;Parent=MS.gene005324.t1 |
chr1.1 | CDS | 62466438 | 62467063 | 62466438 | ID=cds.MS.gene005324.t1;Parent=MS.gene005324.t1 |
chr1.1 | exon | 62465031 | 62466371 | 62465031 | ID=MS.gene005324.t1.exon3;Parent=MS.gene005324.t1 |
chr1.1 | CDS | 62465031 | 62466371 | 62465031 | ID=cds.MS.gene005324.t1;Parent=MS.gene005324.t1 |
Gene Sequence |
Protein sequence |