AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005377

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005377.t1 MTR_1g085040 97.832 369 6 2 1 367 1 369 0.0 741
MS.gene005377.t1 MTR_7g111290 56.965 402 116 20 1 367 1 380 5.28e-118 347
MS.gene005377.t1 MTR_7g110830 48.196 388 158 9 1 366 1 367 1.31e-102 307
MS.gene005377.t1 MTR_1g085640 50.372 403 144 17 1 364 1 386 2.36e-102 307
MS.gene005377.t1 MTR_4g105130 72.561 164 43 1 1 162 1 164 1.05e-82 256
MS.gene005377.t1 MTR_7g111290 51.389 360 118 20 43 367 1 338 2.47e-80 249
MS.gene005377.t1 MTR_1g112760 60.194 206 69 4 3 204 4 200 6.34e-77 237
MS.gene005377.t1 MTR_3g077110 82.946 129 22 0 1 129 1 129 1.02e-76 240
MS.gene005377.t1 MTR_8g017440 72.388 134 31 1 1 128 1 134 3.24e-69 221
MS.gene005377.t1 MTR_2g099740 72.180 133 37 0 1 133 1 133 4.46e-69 222
MS.gene005377.t1 MTR_2g064160 70.769 130 37 1 1 130 1 129 1.61e-67 216
MS.gene005377.t1 MTR_8g017540 75.610 123 30 0 1 123 47 169 4.15e-67 217
MS.gene005377.t1 MTR_8g017500 73.984 123 32 0 1 123 1 123 9.28e-67 214
MS.gene005377.t1 MTR_4g073420 60.403 149 59 0 1 149 1 149 1.12e-63 204
MS.gene005377.t1 MTR_7g076740 62.252 151 55 2 1 149 1 151 4.01e-63 204
MS.gene005377.t1 MTR_8g098860 72.034 118 33 0 1 118 1 118 9.35e-63 203
MS.gene005377.t1 MTR_6g012690 59.412 170 60 3 1 170 1 161 1.02e-62 204
MS.gene005377.t1 MTR_4g478180 67.969 128 41 0 1 128 2 129 1.65e-62 204
MS.gene005377.t1 MTR_8g095390 68.217 129 41 0 1 129 1 129 1.79e-62 202
MS.gene005377.t1 MTR_7g011170 42.953 298 137 6 1 298 1 265 2.04e-62 202
MS.gene005377.t1 MTR_3g074520 64.394 132 47 0 1 132 1 132 2.09e-62 203
MS.gene005377.t1 MTR_3g097450 65.649 131 45 0 1 131 1 131 4.21e-62 201
MS.gene005377.t1 MTR_8g017390 76.068 117 27 1 1 116 1 117 1.27e-61 205
MS.gene005377.t1 MTR_4g082230 62.500 152 54 1 1 152 1 149 1.55e-61 203
MS.gene005377.t1 MTR_5g078140 66.923 130 43 0 1 130 1 130 1.73e-61 200
MS.gene005377.t1 MTR_4g082290 63.158 152 53 1 1 152 1 149 3.40e-61 202
MS.gene005377.t1 MTR_5g079670 58.824 153 61 1 3 153 2 154 4.96e-61 195
MS.gene005377.t1 MTR_8g031360 68.182 132 40 2 1 130 1 132 6.58e-61 198
MS.gene005377.t1 MTR_8g017340 71.774 124 34 1 1 123 1 124 8.86e-61 203
MS.gene005377.t1 MTR_5g029840 64.122 131 47 0 1 131 1 131 2.27e-60 197
MS.gene005377.t1 MTR_3g065440 66.923 130 43 0 1 130 1 130 2.34e-60 197
MS.gene005377.t1 MTR_5g010020 74.545 110 28 0 1 110 1 110 3.40e-60 197
MS.gene005377.t1 MTR_1g100653 69.748 119 36 0 1 119 1 119 1.28e-59 194
MS.gene005377.t1 MTR_8g017350 70.968 124 35 1 1 123 1 124 1.52e-59 203
MS.gene005377.t1 MTR_4g065017 80.374 107 21 0 11 117 16 122 1.64e-59 195
MS.gene005377.t1 MTR_2g097910 79.245 106 22 0 12 117 20 125 1.75e-59 195
MS.gene005377.t1 MTR_4g102380 64.122 131 47 0 1 131 1 131 5.84e-59 192
MS.gene005377.t1 MTR_5g007370 68.333 120 38 0 12 131 12 131 1.18e-58 192
MS.gene005377.t1 MTR_2g089620 67.969 128 41 0 1 128 1 128 1.71e-58 192
MS.gene005377.t1 MTR_2g011660 65.891 129 43 1 1 128 1 129 1.83e-58 193
MS.gene005377.t1 MTR_3g028740 78.899 109 23 0 9 117 19 127 2.00e-58 193
MS.gene005377.t1 MTR_6g009430 52.047 171 78 2 1 169 1 169 2.62e-58 192
MS.gene005377.t1 MTR_4g091490 65.116 129 44 1 1 128 1 129 7.85e-58 192
MS.gene005377.t1 MTR_3g461490 54.878 164 70 1 1 160 1 164 1.14e-57 190
MS.gene005377.t1 MTR_4g485530 64.286 126 45 0 1 126 1 126 1.87e-56 183
MS.gene005377.t1 MTR_1g100667 72.269 119 32 1 9 127 10 127 9.12e-56 184
MS.gene005377.t1 MTR_1g076150 68.067 119 38 0 1 119 1 119 1.93e-55 182
MS.gene005377.t1 MTR_6g055910 64.444 135 47 1 9 142 11 145 4.85e-54 180
MS.gene005377.t1 MTR_1g043050 67.241 116 38 0 1 116 1 116 4.59e-53 176
MS.gene005377.t1 MTR_7g115650 60.331 121 48 0 1 121 1 121 1.48e-52 173
MS.gene005377.t1 MTR_3g083540 62.903 124 46 0 6 129 35 158 1.59e-52 176
MS.gene005377.t1 MTR_1g043080 66.379 116 39 0 1 116 1 116 1.94e-52 174
MS.gene005377.t1 MTR_5g042030 65.546 119 41 0 12 130 7 125 6.41e-52 174
MS.gene005377.t1 MTR_7g096930 64.407 118 42 0 1 118 1 118 9.55e-52 174
MS.gene005377.t1 MTR_2g089450 62.931 116 43 0 1 116 1 116 5.04e-50 168
MS.gene005377.t1 MTR_4g125520 61.864 118 45 0 1 118 1 118 5.83e-50 170
MS.gene005377.t1 MTR_4g121460 65.517 116 40 0 1 116 1 116 7.90e-50 171
MS.gene005377.t1 MTR_0251s0050 61.538 117 45 0 5 121 6 122 9.49e-50 168
MS.gene005377.t1 MTR_2g034790 49.451 182 86 3 1 182 1 176 5.87e-49 168
MS.gene005377.t1 MTR_8g027345 61.345 119 46 0 1 119 1 119 7.83e-49 167
MS.gene005377.t1 MTR_0008s0390 63.964 111 40 0 5 115 6 116 1.36e-48 165
MS.gene005377.t1 MTR_1g017000 51.852 135 61 2 1 134 1 132 2.94e-48 164
MS.gene005377.t1 MTR_2g067420 64.220 109 39 0 2 110 4 112 3.19e-48 166
MS.gene005377.t1 MTR_7g117730 60.684 117 46 0 1 117 1 117 6.94e-48 163
MS.gene005377.t1 MTR_1g017140 45.930 172 84 2 1 163 1 172 9.00e-48 165
MS.gene005377.t1 MTR_5g014990 44.809 183 96 3 1 182 1 179 1.53e-47 164
MS.gene005377.t1 MTR_7g010210 59.664 119 48 0 1 119 1 119 2.04e-47 164
MS.gene005377.t1 MTR_7g010210 59.664 119 48 0 1 119 1 119 3.69e-47 161
MS.gene005377.t1 MTR_4g057635 62.393 117 43 1 1 116 1 117 3.76e-47 163
MS.gene005377.t1 MTR_2g089420 63.636 110 40 0 7 116 6 115 9.05e-47 165
MS.gene005377.t1 MTR_3g103570 59.829 117 46 1 1 116 1 117 9.85e-47 162
MS.gene005377.t1 MTR_0008s0470 59.483 116 46 1 1 115 1 116 1.04e-46 161
MS.gene005377.t1 MTR_2g095520 63.964 111 39 1 1 110 1 111 9.99e-46 159
MS.gene005377.t1 MTR_0140s0030 47.059 170 81 3 1 164 2 168 1.53e-45 159
MS.gene005377.t1 MTR_0489s0020 47.059 170 81 3 1 164 2 168 1.53e-45 159
MS.gene005377.t1 MTR_7g087130 47.853 163 74 2 1 161 1 154 2.95e-45 158
MS.gene005377.t1 MTR_4g097570 62.727 110 40 1 1 109 1 110 8.39e-45 156
MS.gene005377.t1 MTR_7g102110 58.974 117 47 1 1 116 1 117 9.23e-45 155
MS.gene005377.t1 MTR_3g039990 58.475 118 49 0 1 118 2 119 9.85e-45 156
MS.gene005377.t1 MTR_3g052430 63.551 107 39 0 12 118 41 147 3.13e-44 160
MS.gene005377.t1 MTR_6g090405 58.621 116 47 1 1 115 1 116 3.50e-44 153
MS.gene005377.t1 MTR_3g052450 62.617 107 40 0 12 118 40 146 4.95e-44 159
MS.gene005377.t1 MTR_4g097570 62.162 111 40 2 1 109 1 111 6.83e-44 154
MS.gene005377.t1 MTR_1g073170 61.261 111 43 0 5 115 13 123 1.24e-43 152
MS.gene005377.t1 MTR_7g035075 57.025 121 50 1 1 119 1 121 1.46e-43 150
MS.gene005377.t1 MTR_0008s0280 61.321 106 41 0 9 114 9 114 1.47e-43 151
MS.gene005377.t1 MTR_6g012180 60.909 110 43 0 1 110 1 110 1.53e-43 153
MS.gene005377.t1 MTR_1g045610 58.772 114 47 0 4 117 13 126 3.26e-43 150
MS.gene005377.t1 MTR_1g110460 53.659 123 57 0 11 133 25 147 5.18e-43 152
MS.gene005377.t1 MTR_0063s0090 61.905 105 40 0 9 113 9 113 6.26e-43 149
MS.gene005377.t1 MTR_6g006030 60.185 108 43 0 11 118 13 120 6.44e-43 148
MS.gene005377.t1 MTR_7g109320 63.793 116 42 0 1 116 1 116 3.24e-42 151
MS.gene005377.t1 MTR_4g128670 58.559 111 45 1 1 110 1 111 6.22e-42 150
MS.gene005377.t1 MTR_1g086530 55.172 116 52 0 12 127 33 148 1.34e-41 147
MS.gene005377.t1 MTR_8g042410 61.321 106 41 0 12 117 37 142 2.00e-41 152
MS.gene005377.t1 MTR_3g011610 59.434 106 43 0 12 117 37 142 3.54e-41 151
MS.gene005377.t1 MTR_3g045430 51.128 133 64 1 1 132 1 133 1.06e-40 145
MS.gene005377.t1 MTR_4g100720 60.748 107 42 0 9 115 10 116 1.12e-40 141
MS.gene005377.t1 MTR_1g021230 61.321 106 41 0 12 117 57 162 1.48e-40 148
MS.gene005377.t1 MTR_8g020490 58.716 109 45 0 10 118 6 114 1.83e-40 143
MS.gene005377.t1 MTR_1g062940 47.239 163 70 4 12 173 6 153 3.32e-40 142
MS.gene005377.t1 MTR_1g086510 57.018 114 49 0 12 125 21 134 9.47e-40 142
MS.gene005377.t1 MTR_2g088170 62.264 106 40 0 12 117 29 134 5.02e-38 142
MS.gene005377.t1 MTR_4g063100 55.660 106 47 0 13 118 8 113 1.58e-37 135
MS.gene005377.t1 MTR_5g079120 51.724 116 56 0 9 124 58 173 4.52e-37 136
MS.gene005377.t1 MTR_0197s0010 58.000 100 42 0 17 116 6 105 6.21e-37 133
MS.gene005377.t1 MTR_5g078800 57.143 105 45 0 12 116 7 111 1.56e-36 133
MS.gene005377.t1 MTR_5g079290 54.286 105 48 0 12 116 17 121 3.71e-36 132
MS.gene005377.t1 MTR_5g079220 52.727 110 52 0 7 116 16 125 4.20e-36 132
MS.gene005377.t1 MTR_0247s0040 56.863 102 44 0 12 113 7 108 5.83e-36 129
MS.gene005377.t1 MTR_5g078910 54.206 107 49 0 10 116 5 111 6.36e-36 133
MS.gene005377.t1 MTR_2g096380 51.402 107 52 0 9 115 3 109 1.23e-35 130
MS.gene005377.t1 MTR_2g033170 54.310 116 53 0 12 127 24 139 3.17e-35 132
MS.gene005377.t1 MTR_7g017260 46.377 138 60 2 12 147 25 150 5.69e-35 129
MS.gene005377.t1 MTR_0193s0090 55.340 103 46 0 12 114 7 109 1.25e-34 127
MS.gene005377.t1 MTR_1g083630 47.368 152 67 3 11 156 11 155 1.28e-34 134
MS.gene005377.t1 MTR_5g088080 51.786 112 52 2 13 123 13 123 1.44e-34 128
MS.gene005377.t1 MTR_5g088150 51.786 112 52 2 13 123 13 123 1.44e-34 128
MS.gene005377.t1 MTR_5g488210 51.786 112 52 2 13 123 13 123 1.44e-34 128
MS.gene005377.t1 MTR_5g088640 51.786 112 52 2 13 123 13 123 1.45e-34 128
MS.gene005377.t1 MTR_5g078860 54.286 105 48 0 12 116 7 111 1.46e-34 129
MS.gene005377.t1 MTR_5g488170 51.786 112 52 2 13 123 13 123 1.94e-34 127
MS.gene005377.t1 MTR_8g060940 56.436 101 44 0 12 112 7 107 2.22e-34 127
MS.gene005377.t1 MTR_5g078930 55.340 103 46 0 13 115 10 112 3.85e-34 125
MS.gene005377.t1 MTR_5g078950 52.885 104 49 0 10 113 5 108 4.82e-34 127
MS.gene005377.t1 MTR_0001s0360 53.333 105 49 0 12 116 7 111 7.32e-34 126
MS.gene005377.t1 MTR_5g062790 50.893 112 53 2 13 123 10 120 1.23e-33 127
MS.gene005377.t1 MTR_4g123040 53.448 116 54 0 12 127 24 139 1.40e-33 127
MS.gene005377.t1 MTR_8g006470 51.818 110 52 1 9 117 7 116 1.08e-32 124
MS.gene005377.t1 MTR_4g029540 42.581 155 84 3 12 164 10 161 2.03e-32 123
MS.gene005377.t1 MTR_6g055910 58.416 101 41 1 43 142 16 116 2.25e-32 122
MS.gene005377.t1 MTR_5g007300 65.000 80 28 0 9 88 61 140 5.01e-32 117
MS.gene005377.t1 MTR_5g088610 50.000 112 54 2 13 123 10 120 3.24e-31 121
MS.gene005377.t1 MTR_3g463400 44.928 138 70 4 12 145 131 266 1.93e-30 121
MS.gene005377.t1 MTR_5g016510 50.427 117 55 2 14 129 5 119 1.61e-29 116
MS.gene005377.t1 MTR_4g063100 63.158 76 28 0 43 118 9 84 1.61e-29 114
MS.gene005377.t1 MTR_4g019370 44.667 150 64 5 14 158 38 173 1.97e-29 116
MS.gene005377.t1 MTR_4g094982 52.941 102 47 1 14 115 5 105 4.25e-28 111
MS.gene005377.t1 MTR_5g070020 33.628 226 106 9 12 226 120 312 8.81e-28 112
MS.gene005377.t1 MTR_1g085880 52.252 111 51 2 10 118 9 119 1.27e-27 107
MS.gene005377.t1 MTR_1g085770 52.252 111 51 2 10 118 9 119 6.93e-27 108
MS.gene005377.t1 MTR_2g096380 60.274 73 29 0 43 115 18 90 8.54e-27 106
MS.gene005377.t1 MTR_7g061330 49.533 107 51 2 11 116 110 214 1.76e-26 110
MS.gene005377.t1 MTR_7g461410 49.533 107 51 2 11 116 110 214 1.76e-26 110
MS.gene005377.t1 MTR_7g061330 49.533 107 51 2 11 116 74 178 2.52e-26 110
MS.gene005377.t1 MTR_3g101290 51.961 102 48 1 14 115 37 137 4.52e-26 104
MS.gene005377.t1 MTR_5g049190 47.525 101 50 2 9 108 14 112 7.02e-26 104
MS.gene005377.t1 MTR_1g057980 46.000 100 53 1 12 111 78 176 7.75e-26 105
MS.gene005377.t1 MTR_4g128190 48.077 104 40 2 12 114 11 101 8.66e-26 104
MS.gene005377.t1 MTR_3g110028 47.664 107 53 2 11 116 82 186 1.64e-25 108
MS.gene005377.t1 MTR_6g015455 52.427 103 46 2 14 115 5 105 2.53e-25 108
MS.gene005377.t1 MTR_8g017480 80.769 52 10 0 1 52 1 52 3.35e-25 97.1
MS.gene005377.t1 MTR_3g077650 36.250 160 77 4 14 153 181 335 3.60e-25 106
MS.gene005377.t1 MTR_6g027360 43.119 109 59 2 11 118 75 181 1.10e-24 102
MS.gene005377.t1 MTR_7g035350 43.590 117 61 3 14 129 225 337 1.35e-24 104
MS.gene005377.t1 MTR_1g026870 45.794 107 55 2 11 116 82 186 4.56e-24 104
MS.gene005377.t1 MTR_6g074860 43.396 106 57 2 14 118 4 107 5.38e-24 99.4
MS.gene005377.t1 MTR_5g041570 42.202 109 60 2 11 118 131 237 5.69e-24 102
MS.gene005377.t1 MTR_4g082040 43.396 106 57 2 14 118 105 208 6.79e-24 102
MS.gene005377.t1 MTR_7g451170 42.718 103 56 2 14 115 191 291 7.90e-24 102
MS.gene005377.t1 MTR_4g105660 43.689 103 55 2 14 115 180 280 1.16e-23 101
MS.gene005377.t1 MTR_6g027340 41.509 106 59 2 14 118 16 119 1.17e-23 97.4
MS.gene005377.t1 MTR_5g082910 50.000 100 47 2 14 112 19 116 1.55e-23 99.4
MS.gene005377.t1 MTR_7g037260 40.196 102 60 1 14 115 145 245 2.55e-23 99.8
MS.gene005377.t1 MTR_4g088015 40.594 101 59 1 14 114 221 320 1.04e-22 99.4
MS.gene005377.t1 MTR_3g089045 43.396 106 57 2 14 118 16 119 5.64e-22 95.1
MS.gene005377.t1 MTR_7g037130 38.182 110 64 2 14 120 145 253 1.84e-21 94.7
MS.gene005377.t1 MTR_5g010650 45.455 99 51 2 12 109 108 204 2.68e-21 95.1
MS.gene005377.t1 MTR_7g086960 31.250 208 121 7 8 199 83 284 1.17e-20 92.4
MS.gene005377.t1 MTR_6g027370 40.566 106 60 2 14 118 99 202 1.18e-20 92.4
MS.gene005377.t1 MTR_7g450950 35.780 109 66 2 14 119 157 264 1.90e-20 91.3
MS.gene005377.t1 MTR_0023s0210 49.351 77 39 0 12 88 7 83 2.48e-19 82.0
MS.gene005377.t1 MTR_7g061550 39.048 105 62 1 17 119 10 114 2.76e-18 85.5
MS.gene005377.t1 MTR_5g038910 36.190 105 66 1 17 121 29 132 4.52e-17 82.8
MS.gene005377.t1 MTR_5g038910 36.190 105 66 1 17 121 29 132 4.60e-17 82.0
MS.gene005377.t1 MTR_8g468380 35.088 114 72 2 17 130 25 136 2.97e-16 80.1
MS.gene005377.t1 MTR_6g055910 50.000 74 36 1 70 142 2 75 1.29e-14 72.4
MS.gene005377.t1 MTR_4g063100 60.870 46 18 0 73 118 4 49 5.32e-13 67.4
MS.gene005377.t1 MTR_2g096380 58.140 43 18 0 73 115 4 46 2.04e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005377.t1 AT1G09540 47.433 409 130 11 1 367 1 366 8.14e-111 328
MS.gene005377.t1 AT1G57560 49.865 371 125 14 1 367 1 314 5.55e-99 296
MS.gene005377.t1 AT4G01680 46.832 363 141 8 1 343 1 331 6.47e-90 274
MS.gene005377.t1 AT1G57560 69.430 193 46 2 1 187 1 186 9.69e-90 271
MS.gene005377.t1 AT4G01680 91.729 133 11 0 1 133 1 133 4.32e-89 268
MS.gene005377.t1 AT5G26660 90.698 129 12 0 1 129 1 129 1.46e-87 268
MS.gene005377.t1 AT4G01680 45.333 375 141 9 1 343 1 343 1.03e-86 266
MS.gene005377.t1 AT3G12720 72.222 126 34 1 1 126 12 136 1.77e-68 218
MS.gene005377.t1 AT3G13890 79.310 116 24 0 1 116 1 116 3.12e-67 216
MS.gene005377.t1 AT3G61250 69.767 129 39 0 1 129 1 129 8.25e-65 208
MS.gene005377.t1 AT3G13890 73.600 125 24 1 1 116 1 125 4.06e-64 208
MS.gene005377.t1 AT1G63910 68.750 128 40 0 1 128 1 128 9.02e-64 207
MS.gene005377.t1 AT4G12350 52.261 199 78 4 1 194 1 187 1.12e-63 205
MS.gene005377.t1 AT1G66230 63.014 146 54 0 1 146 1 146 3.56e-63 203
MS.gene005377.t1 AT5G15310 62.987 154 51 1 1 154 1 148 4.87e-63 204
MS.gene005377.t1 AT5G15310 62.987 154 51 1 1 154 1 148 5.47e-63 204
MS.gene005377.t1 AT5G15310 62.987 154 51 1 1 154 1 148 1.14e-62 201
MS.gene005377.t1 AT5G16600 68.421 133 42 0 1 133 1 133 3.53e-62 202
MS.gene005377.t1 AT3G01140 68.939 132 41 0 1 132 1 132 8.92e-62 202
MS.gene005377.t1 AT4G22680 62.069 145 53 1 1 143 1 145 1.14e-61 199
MS.gene005377.t1 AT4G34990 58.170 153 64 0 1 153 1 153 1.41e-61 199
MS.gene005377.t1 AT3G02940 64.122 131 47 0 1 131 1 131 2.16e-61 199
MS.gene005377.t1 AT3G02940 64.122 131 47 0 1 131 1 131 4.73e-61 199
MS.gene005377.t1 AT3G02940 64.122 131 47 0 1 131 1 131 4.73e-61 199
MS.gene005377.t1 AT1G34670 64.394 132 47 0 1 132 1 132 4.91e-61 200
MS.gene005377.t1 AT5G10280 64.394 132 47 0 1 132 1 132 5.54e-61 199
MS.gene005377.t1 AT5G65230 66.412 131 44 0 1 131 1 131 7.41e-61 198
MS.gene005377.t1 AT2G16720 63.158 133 49 0 1 133 1 133 8.04e-61 197
MS.gene005377.t1 AT1G22640 63.359 131 48 0 1 131 1 131 8.62e-61 196
MS.gene005377.t1 AT5G16770 63.359 131 48 0 1 131 1 131 2.45e-60 197
MS.gene005377.t1 AT5G16770 63.359 131 48 0 1 131 1 131 2.45e-60 197
MS.gene005377.t1 AT4G38620 63.359 131 48 0 1 131 1 131 2.48e-60 196
MS.gene005377.t1 AT5G16770 63.359 131 48 0 1 131 1 131 4.82e-60 197
MS.gene005377.t1 AT5G16770 63.359 131 48 0 1 131 1 131 4.82e-60 197
MS.gene005377.t1 AT4G05100 65.891 129 43 1 1 128 1 129 5.09e-60 196
MS.gene005377.t1 AT4G28110 65.625 128 44 0 1 128 1 128 8.51e-60 194
MS.gene005377.t1 AT4G21440 65.625 128 44 0 1 128 1 128 1.07e-59 196
MS.gene005377.t1 AT4G09460 62.595 131 49 0 1 131 1 131 3.08e-59 192
MS.gene005377.t1 AT3G01140 69.291 127 39 0 6 132 49 175 7.45e-59 195
MS.gene005377.t1 AT5G56110 64.394 132 47 0 1 132 1 132 1.93e-58 192
MS.gene005377.t1 AT5G12870 76.147 109 26 0 10 118 16 124 4.73e-58 190
MS.gene005377.t1 AT4G17785 64.341 129 45 1 1 128 1 129 7.77e-58 192
MS.gene005377.t1 AT4G17785 64.341 129 45 1 1 128 1 129 9.04e-58 192
MS.gene005377.t1 AT5G60890 61.240 129 50 0 1 129 1 129 1.31e-57 189
MS.gene005377.t1 AT5G14340 61.364 132 51 0 1 132 13 144 2.59e-57 188
MS.gene005377.t1 AT5G61420 61.194 134 52 0 1 134 1 134 3.10e-57 191
MS.gene005377.t1 AT5G07690 60.432 139 55 0 1 139 1 139 3.23e-57 189
MS.gene005377.t1 AT1G74430 65.625 128 44 0 1 128 1 128 1.23e-56 186
MS.gene005377.t1 AT1G35515 60.305 131 52 0 1 131 1 131 3.22e-56 183
MS.gene005377.t1 AT3G08500 71.795 117 30 1 4 117 19 135 3.32e-56 187
MS.gene005377.t1 AT5G62320 50.000 176 78 2 2 170 3 175 6.78e-56 183
MS.gene005377.t1 AT1G06180 68.908 119 37 0 1 119 1 119 1.42e-55 182
MS.gene005377.t1 AT1G18570 61.832 131 49 1 1 130 1 131 6.27e-55 184
MS.gene005377.t1 AT3G28470 63.636 132 48 0 1 132 1 132 7.44e-55 183
MS.gene005377.t1 AT5G07700 60.769 130 51 0 1 130 1 130 8.16e-55 183
MS.gene005377.t1 AT5G07700 60.769 130 51 0 1 130 1 130 8.16e-55 183
MS.gene005377.t1 AT5G54230 64.062 128 46 0 1 128 1 128 8.83e-55 183
MS.gene005377.t1 AT3G23250 43.318 217 101 3 1 199 1 213 1.56e-54 181
MS.gene005377.t1 AT3G13540 62.097 124 47 0 6 129 17 140 5.32e-54 179
MS.gene005377.t1 AT2G31180 58.042 143 57 1 1 140 1 143 5.38e-54 179
MS.gene005377.t1 AT1G74080 61.240 129 50 0 1 129 1 129 1.01e-53 181
MS.gene005377.t1 AT1G56160 67.826 115 37 0 2 116 4 118 4.29e-53 177
MS.gene005377.t1 AT1G18710 57.534 146 55 1 1 146 1 139 6.85e-53 176
MS.gene005377.t1 AT1G79180 66.949 118 39 0 2 119 4 121 1.43e-52 176
MS.gene005377.t1 AT1G16490 53.165 158 70 1 2 155 4 161 4.48e-51 172
MS.gene005377.t1 AT5G26660 88.235 85 10 0 45 129 14 98 1.09e-50 172
MS.gene005377.t1 AT3G48920 67.925 106 34 0 9 114 15 120 3.89e-49 166
MS.gene005377.t1 AT5G52260 69.369 111 34 0 9 119 9 119 8.32e-49 166
MS.gene005377.t1 AT3G12820 64.035 114 41 0 3 116 5 118 3.06e-48 163
MS.gene005377.t1 AT2G47460 57.576 132 56 0 1 132 1 132 1.84e-47 165
MS.gene005377.t1 AT5G23000 61.538 117 44 1 1 116 1 117 2.17e-47 164
MS.gene005377.t1 AT5G62470 51.266 158 62 2 1 155 1 146 6.57e-47 163
MS.gene005377.t1 AT4G25560 65.179 112 39 0 8 119 6 117 6.81e-47 161
MS.gene005377.t1 AT5G49330 62.931 116 43 0 1 116 1 116 8.06e-47 162
MS.gene005377.t1 AT3G62610 61.207 116 45 0 1 116 1 116 1.16e-46 162
MS.gene005377.t1 AT3G47600 59.322 118 48 0 1 118 1 118 1.17e-46 162
MS.gene005377.t1 AT5G57620 60.684 117 45 1 1 116 1 117 1.29e-46 162
MS.gene005377.t1 AT3G49690 61.538 117 44 1 1 116 1 117 1.74e-46 161
MS.gene005377.t1 AT5G65790 60.684 117 45 1 1 116 1 117 2.10e-46 162
MS.gene005377.t1 AT1G74650 62.069 116 44 0 1 116 1 116 2.61e-46 161
MS.gene005377.t1 AT1G08810 51.220 164 73 3 1 162 1 159 5.19e-46 159
MS.gene005377.t1 AT1G79180 52.318 151 39 1 2 119 4 154 1.18e-45 159
MS.gene005377.t1 AT5G62470 51.266 158 61 3 1 155 1 145 4.42e-45 158
MS.gene005377.t1 AT2G36890 55.906 127 55 1 1 126 1 127 8.09e-45 156
MS.gene005377.t1 AT2G36890 55.906 127 55 1 1 126 42 168 1.12e-44 157
MS.gene005377.t1 AT5G14750 60.577 104 41 0 13 116 17 120 1.51e-44 152
MS.gene005377.t1 AT5G06100 64.151 106 38 0 12 117 32 137 1.85e-44 159
MS.gene005377.t1 AT4G37780 58.974 117 47 1 1 116 1 117 1.96e-44 155
MS.gene005377.t1 AT3G27810 58.559 111 46 0 11 121 19 129 2.22e-44 153
MS.gene005377.t1 AT5G35550 64.815 108 38 0 9 116 11 118 2.55e-44 154
MS.gene005377.t1 AT3G01530 60.185 108 43 0 12 119 25 132 3.65e-44 152
MS.gene005377.t1 AT5G06100 64.151 106 38 0 12 117 32 137 8.17e-44 159
MS.gene005377.t1 AT5G06100 64.151 106 38 0 12 117 32 137 8.17e-44 159
MS.gene005377.t1 AT5G06100 64.151 106 38 0 12 117 32 137 8.17e-44 159
MS.gene005377.t1 AT5G06100 64.151 106 38 0 12 117 32 137 8.17e-44 159
MS.gene005377.t1 AT3G28910 54.264 129 57 1 1 129 1 127 8.40e-44 154
MS.gene005377.t1 AT5G40350 50.714 140 59 1 11 140 16 155 1.52e-43 150
MS.gene005377.t1 AT5G40330 57.407 108 46 0 9 116 9 116 2.51e-43 150
MS.gene005377.t1 AT3G11440 61.321 106 41 0 12 117 41 146 7.23e-43 155
MS.gene005377.t1 AT3G27920 57.009 107 46 0 10 116 12 118 1.23e-42 148
MS.gene005377.t1 AT5G55020 62.617 107 40 0 12 118 26 132 3.40e-42 154
MS.gene005377.t1 AT3G11440 61.321 106 41 0 12 117 41 146 3.41e-42 155
MS.gene005377.t1 AT3G11440 61.321 106 41 0 12 117 41 146 3.41e-42 155
MS.gene005377.t1 AT3G11440 61.321 106 41 0 12 117 41 146 3.41e-42 155
MS.gene005377.t1 AT5G52600 52.239 134 55 2 9 133 9 142 3.54e-42 146
MS.gene005377.t1 AT2G26960 58.407 113 46 1 9 121 17 128 3.68e-42 152
MS.gene005377.t1 AT3G30210 47.273 165 85 1 13 175 28 192 3.84e-42 149
MS.gene005377.t1 AT4G13480 63.810 105 38 0 13 117 7 111 5.20e-42 148
MS.gene005377.t1 AT1G68320 55.285 123 55 0 10 132 17 139 5.39e-42 148
MS.gene005377.t1 AT3G24310 62.857 105 39 0 13 117 19 123 6.42e-42 148
MS.gene005377.t1 AT1G25340 55.833 120 53 0 13 132 19 138 1.48e-41 147
MS.gene005377.t1 AT2G32460 59.259 108 44 0 10 117 16 123 5.27e-41 150
MS.gene005377.t1 AT2G32460 59.259 108 44 0 10 117 4 111 5.67e-41 150
MS.gene005377.t1 AT2G47190 37.811 201 111 1 12 198 20 220 1.47e-40 144
MS.gene005377.t1 AT4G26930 59.813 107 43 0 12 118 19 125 2.96e-40 146
MS.gene005377.t1 AT1G48000 55.652 115 51 0 11 125 31 145 3.77e-40 142
MS.gene005377.t1 AT5G59780 53.636 110 51 0 9 118 5 114 5.68e-37 134
MS.gene005377.t1 AT1G25340 53.333 120 51 1 13 132 19 133 1.04e-36 134
MS.gene005377.t1 AT3G06490 56.034 116 51 0 12 127 19 134 1.62e-36 135
MS.gene005377.t1 AT3G53200 55.140 107 48 0 9 115 6 112 1.68e-36 132
MS.gene005377.t1 AT3G46130 54.717 106 48 0 13 118 10 115 1.81e-36 133
MS.gene005377.t1 AT1G25340 53.333 120 51 1 13 132 19 133 1.96e-36 134
MS.gene005377.t1 AT2G26950 48.696 115 56 1 6 120 10 121 2.72e-35 133
MS.gene005377.t1 AT5G49620 54.310 116 53 0 12 127 26 141 5.55e-35 130
MS.gene005377.t1 AT1G66370 55.769 104 46 0 12 115 8 111 8.60e-35 128
MS.gene005377.t1 AT3G60460 51.818 110 52 1 9 117 8 117 9.53e-33 124
MS.gene005377.t1 AT1G66380 58.654 104 43 0 12 115 8 111 1.53e-32 119
MS.gene005377.t1 AT1G56650 51.667 120 50 1 12 123 8 127 1.59e-31 120
MS.gene005377.t1 AT5G49620 48.462 130 53 1 12 127 26 155 2.17e-31 121
MS.gene005377.t1 AT5G35550 72.973 74 20 0 43 116 48 121 5.05e-31 119
MS.gene005377.t1 AT1G66390 56.604 106 46 0 10 115 6 111 9.59e-31 117
MS.gene005377.t1 AT3G27810 61.039 77 30 0 45 121 4 80 1.24e-30 115
MS.gene005377.t1 AT3G12820 72.464 69 19 0 48 116 2 70 1.43e-30 115
MS.gene005377.t1 AT5G14750 68.116 69 22 0 48 116 18 86 6.62e-30 113
MS.gene005377.t1 AT5G40350 50.000 106 43 1 45 140 5 110 1.51e-29 112
MS.gene005377.t1 AT3G47600 53.684 95 40 1 24 118 22 112 1.26e-28 114
MS.gene005377.t1 AT3G46130 62.667 75 28 0 44 118 9 83 1.63e-28 111
MS.gene005377.t1 AT1G22640 62.162 74 28 0 58 131 1 74 1.96e-28 110
MS.gene005377.t1 AT3G46130 63.514 74 27 0 45 118 20 93 3.91e-28 110
MS.gene005377.t1 AT5G59780 63.514 74 27 0 45 118 20 93 4.16e-28 109
MS.gene005377.t1 AT3G53200 64.789 71 25 0 45 115 9 79 1.20e-27 108
MS.gene005377.t1 AT1G18960 43.802 121 61 4 14 132 10 125 5.31e-27 109
MS.gene005377.t1 AT5G58850 37.725 167 85 6 12 163 103 265 5.57e-27 111
MS.gene005377.t1 AT4G37260 51.852 108 49 2 14 120 13 118 6.89e-27 109
MS.gene005377.t1 AT3G27785 45.370 108 56 2 9 115 184 289 7.43e-27 110
MS.gene005377.t1 AT5G40360 43.519 108 59 2 9 116 153 258 2.30e-26 108
MS.gene005377.t1 AT5G11050 44.660 103 54 2 14 115 105 205 4.62e-26 108
MS.gene005377.t1 AT4G18770 44.954 109 57 2 9 116 212 318 5.21e-26 108
MS.gene005377.t1 AT5G02320 47.664 107 53 2 11 116 124 228 1.53e-25 108
MS.gene005377.t1 AT5G02320 47.664 107 53 2 11 116 124 228 1.53e-25 108
MS.gene005377.t1 AT5G02320 47.664 107 53 2 11 116 64 168 1.63e-25 107
MS.gene005377.t1 AT2G23290 51.456 103 47 2 14 115 13 113 1.84e-25 105
MS.gene005377.t1 AT1G71030 55.844 77 34 0 51 127 5 81 2.15e-25 101
MS.gene005377.t1 AT1G71030 55.844 77 34 0 51 127 19 95 2.64e-25 101
MS.gene005377.t1 AT3G09230 50.000 104 49 2 14 116 55 156 2.76e-25 105
MS.gene005377.t1 AT5G67300 49.515 103 49 2 14 115 6 106 3.01e-25 104
MS.gene005377.t1 AT2G39880 52.427 103 46 2 14 115 50 150 4.15e-25 105
MS.gene005377.t1 AT3G09370 48.571 105 51 2 12 115 128 230 5.19e-25 106
MS.gene005377.t1 AT3G09370 48.571 105 51 2 12 115 133 235 5.44e-25 106
MS.gene005377.t1 AT3G09370 48.571 105 51 2 12 115 141 243 8.30e-25 105
MS.gene005377.t1 AT5G11510 46.729 107 54 2 11 116 78 182 9.07e-25 106
MS.gene005377.t1 AT5G11510 46.729 107 54 2 11 116 78 182 9.07e-25 106
MS.gene005377.t1 AT5G11510 46.729 107 54 2 11 116 78 182 9.07e-25 106
MS.gene005377.t1 AT3G55730 52.427 103 46 2 14 115 56 156 1.01e-24 104
MS.gene005377.t1 AT1G17950 45.283 106 55 2 14 118 5 108 1.47e-24 101
MS.gene005377.t1 AT1G73410 45.794 107 55 2 14 119 6 110 1.53e-24 100
MS.gene005377.t1 AT5G11510 46.729 107 54 2 11 116 78 182 1.54e-24 105
MS.gene005377.t1 AT3G50060 43.651 126 64 4 14 138 6 125 1.56e-24 102
MS.gene005377.t1 AT5G11510 46.729 107 54 2 11 116 78 182 1.79e-24 105
MS.gene005377.t1 AT3G23250 68.333 60 19 0 58 117 1 60 2.78e-24 99.8
MS.gene005377.t1 AT1G69560 41.441 111 62 2 9 118 102 210 2.93e-24 102
MS.gene005377.t1 AT1G69560 41.441 111 62 2 9 118 118 226 4.01e-24 102
MS.gene005377.t1 AT1G73410 45.794 107 55 2 14 119 6 110 6.47e-24 98.2
MS.gene005377.t1 AT1G26780 42.593 108 59 2 12 118 96 201 1.75e-23 99.0
MS.gene005377.t1 AT1G26780 42.593 108 59 2 12 118 96 201 2.57e-23 100
MS.gene005377.t1 AT4G32730 44.860 107 56 2 11 116 84 188 2.85e-23 102
MS.gene005377.t1 AT4G32730 44.860 107 56 2 11 116 84 188 2.90e-23 102
MS.gene005377.t1 AT4G32730 44.860 107 56 2 11 116 84 188 2.90e-23 102
MS.gene005377.t1 AT4G32730 44.860 107 56 2 11 116 84 188 2.90e-23 102
MS.gene005377.t1 AT4G32730 44.860 107 56 2 11 116 84 188 2.90e-23 102
MS.gene005377.t1 AT1G66380 58.442 77 32 0 39 115 2 78 2.93e-22 90.9
MS.gene005377.t1 AT2G25230 41.593 113 63 2 9 120 21 131 4.01e-22 94.0
MS.gene005377.t1 AT4G33450 38.739 111 65 2 9 118 14 122 1.29e-21 93.2
MS.gene005377.t1 AT5G17800 40.566 106 62 1 14 119 93 197 1.41e-21 94.4
MS.gene005377.t1 AT5G14750 62.712 59 22 0 58 116 1 59 4.14e-21 89.0
MS.gene005377.t1 AT5G14750 62.712 59 22 0 58 116 1 59 4.14e-21 89.0
MS.gene005377.t1 AT1G66380 54.217 83 38 0 10 92 6 88 7.97e-21 87.0
MS.gene005377.t1 AT3G29020 38.679 106 62 2 14 118 65 168 1.11e-20 90.1
MS.gene005377.t1 AT3G29020 38.679 106 62 2 14 118 67 170 1.27e-20 91.3
MS.gene005377.t1 AT2G02820 37.815 119 72 2 4 121 19 136 5.24e-19 88.6
MS.gene005377.t1 AT2G02820 37.815 119 72 2 4 121 19 136 5.34e-19 87.4
MS.gene005377.t1 AT4G00540 42.342 111 58 3 12 118 101 209 5.83e-19 87.8
MS.gene005377.t1 AT2G02820 37.815 119 72 2 4 121 19 136 8.51e-19 87.8
MS.gene005377.t1 AT4G00540 42.342 111 58 3 12 118 99 207 1.14e-18 87.4
MS.gene005377.t1 AT5G40430 38.053 113 66 3 9 120 49 158 3.04e-18 84.0
MS.gene005377.t1 AT1G14350 40.000 105 62 1 17 121 28 131 3.57e-18 85.9
MS.gene005377.t1 AT1G14350 40.000 105 62 1 17 121 28 131 3.57e-18 85.9
MS.gene005377.t1 AT5G61420 66.667 54 18 0 81 134 2 55 1.08e-16 80.1
MS.gene005377.t1 AT2G37630 35.246 122 77 1 17 136 7 128 1.12e-16 80.9
MS.gene005377.t1 AT5G39700 34.545 110 71 1 9 118 51 159 1.28e-14 72.0
MS.gene005377.t1 AT1G74430 70.732 41 12 0 88 128 19 59 1.79e-14 72.0
MS.gene005377.t1 AT4G28110 73.171 41 11 0 88 128 4 44 3.95e-14 70.9
MS.gene005377.t1 AT5G15310 55.224 67 24 1 88 154 9 69 1.40e-13 70.5
MS.gene005377.t1 AT5G59780 60.870 46 18 0 73 118 4 49 1.70e-13 68.6
MS.gene005377.t1 AT3G46130 60.870 46 18 0 73 118 4 49 1.90e-13 68.9
MS.gene005377.t1 AT1G14350 43.939 66 37 0 56 121 23 88 2.10e-12 68.2
MS.gene005377.t1 AT1G14350 43.939 66 37 0 56 121 23 88 2.10e-12 68.2
MS.gene005377.t1 AT1G22640 61.364 44 17 0 88 131 16 59 2.34e-12 65.5
MS.gene005377.t1 AT5G14340 55.556 45 20 0 88 132 10 54 2.50e-12 65.5
MS.gene005377.t1 AT4G25560 61.224 49 19 0 71 119 3 51 3.08e-12 65.9
MS.gene005377.t1 AT3G18100 35.417 96 61 1 13 108 545 639 5.16e-11 64.7
MS.gene005377.t1 AT3G18100 35.417 96 61 1 13 108 384 478 6.96e-11 64.3
MS.gene005377.t1 AT3G18100 35.417 96 61 1 13 108 497 591 7.09e-11 64.3
MS.gene005377.t1 AT3G28910 50.943 53 24 1 77 129 1 51 8.22e-11 62.0
MS.gene005377.t1 AT3G18100 35.417 96 61 1 13 108 332 426 9.23e-11 63.9

Find 63 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGTTATGAAACCTGTTTC+TGG 0.187715 1.1:-63030340 None:intergenic
TCTTTCCAGAACTTGAACTA+TGG 0.254408 1.1:+63029980 MS.gene005377:CDS
ATCTCATTGTCTGTTCTTCC+TGG 0.281887 1.1:-63029656 None:intergenic
CCTCAGACGGAGTTCATAAC+TGG 0.297158 1.1:+63030176 MS.gene005377:CDS
ATGTTTGTACCTGCTAGTTT+GGG 0.316790 1.1:-63029262 None:intergenic
TATGTTTGTACCTGCTAGTT+TGG 0.322284 1.1:-63029263 None:intergenic
TTGATCCATAGTTCAAGTTC+TGG 0.343300 1.1:-63029985 None:intergenic
AAAGGTGTGGGAAGAGTTGC+AGG 0.345434 1.1:+63029381 MS.gene005377:CDS
GAGAGTGGTTTGTGAGTGTT+TGG 0.356009 1.1:-63029734 None:intergenic
GCTACTATTGTTGATCTTTG+AGG 0.360896 1.1:-63029900 None:intergenic
CATCAAACTCATAACTTCAT+TGG 0.369991 1.1:-63029825 None:intergenic
CCAACATCCATGACCATGTT+TGG 0.389930 1.1:-63029230 None:intergenic
CCTACAAAAGCTTCTATAGA+AGG 0.393701 1.1:+63029854 MS.gene005377:CDS
ACATGTTAAGCCAACTGTTT+CGG 0.398547 1.1:+63030150 MS.gene005377:CDS
TGCTACCAAACCTGGTATCT+AGG 0.408405 1.1:-63029943 None:intergenic
GTGAAACAAATAGATGCATT+TGG 0.408858 1.1:-63030028 None:intergenic
TTCATGCAGTACTTGGTAAC+AGG 0.409516 1.1:+63029483 MS.gene005377:CDS
AGAAGTTTCTCATCTTCCTC+TGG 0.426768 1.1:-63029196 None:intergenic
ATTGAACTTCATGCAGTACT+TGG 0.433082 1.1:+63029476 MS.gene005377:CDS
TTAGCCTCAGTGTACATTGA+TGG 0.437814 1.1:-63030316 None:intergenic
TTATTCCTAGATACCAGGTT+TGG 0.454673 1.1:+63029938 MS.gene005377:CDS
TGATACAGAATGGAGCATAT+TGG 0.462241 1.1:-63030104 None:intergenic
TTGAGGCCTGATTTGAAAAG+AGG 0.464473 1.1:+63029422 MS.gene005377:CDS
AGAAGTTAAGGAAAGGACTT+TGG 0.475806 1.1:+63029170 MS.gene005377:CDS
GGAAGAGTTGCAGGTTAAGA+TGG 0.476199 1.1:+63029390 MS.gene005377:CDS
CGTTACAAGAAGAAATGAAA+TGG 0.477592 1.1:+63030248 MS.gene005377:CDS
GGTTGATTCTGCATAAGAAA+TGG 0.480248 1.1:-63030289 None:intergenic
ACTTGAACTGCTACCAAACC+TGG 0.483346 1.1:-63029951 None:intergenic
ACTGAGGCTAAACCAGAAAC+AGG 0.484680 1.1:+63030328 MS.gene005377:CDS
TGGTATCTAGGAATAATTCA+TGG 0.486504 1.1:-63029931 None:intergenic
TTGAACTATGGATCAAACAT+AGG 0.491185 1.1:+63029992 MS.gene005377:CDS
GCTGCTACAAGCAGAAGTTA+AGG 0.502078 1.1:+63029158 MS.gene005377:CDS
CTGAATTACATTACCAAACA+TGG 0.502718 1.1:+63029217 MS.gene005377:CDS
CAGATGAATCATGTACTAGT+TGG 0.505678 1.1:+63030359 MS.gene005377:CDS
ACTGTTTCGGTTTCCTCAGA+CGG 0.506175 1.1:+63030163 MS.gene005377:CDS
ATTTGTGAAGAAGTTGAAGT+TGG 0.511516 1.1:-63030052 None:intergenic
CCAAACATGGTCATGGATGT+TGG 0.521644 1.1:+63029230 MS.gene005377:CDS
TTTACAGGTTTGCAAAGGTG+TGG 0.532239 1.1:+63029368 MS.gene005377:intron
CAGATTGCAGCACAATTACC+AGG 0.546616 1.1:+63029638 MS.gene005377:CDS
ATGAATTATTCCTAGATACC+AGG 0.549894 1.1:+63029933 MS.gene005377:CDS
TACATTACCAAACATGGTCA+TGG 0.551080 1.1:+63029223 MS.gene005377:CDS
AAGAAAAGATTGAGACAAAG+TGG 0.551516 1.1:+63029704 MS.gene005377:CDS
AGTTCTGTCCCCAAACTAGC+AGG 0.555346 1.1:+63029253 MS.gene005377:CDS
AAATTGAGGGTGATACAGAA+TGG 0.566456 1.1:-63030114 None:intergenic
TTACAGGTTTGCAAAGGTGT+GGG 0.568173 1.1:+63029369 MS.gene005377:intron
CATTTCATTTCTTCTTGTAA+CGG 0.577172 1.1:-63030247 None:intergenic
AACATTAACAACACAAACAA+CGG 0.580018 1.1:+63030217 MS.gene005377:CDS
TGAACTATGGATCAAACATA+GGG 0.580769 1.1:+63029993 MS.gene005377:CDS
ACTTTCTGATATATATAGCA+AGG 0.584658 1.1:+63030408 MS.gene005377:CDS
CTCAGACGGAGTTCATAACT+GGG 0.599007 1.1:+63030177 MS.gene005377:CDS
TAAGATGGATAAATTACTTG+AGG 0.605702 1.1:+63029405 MS.gene005377:CDS
GTTGAAGTCGAGAAAATTGA+GGG 0.606138 1.1:-63030127 None:intergenic
CCAGTTATGAACTCCGTCTG+AGG 0.610061 1.1:-63030176 None:intergenic
GAGGTAGTAGAAACTTCTAG+AGG 0.610829 1.1:-63029881 None:intergenic
TCTGAGGAAACCGAAACAGT+TGG 0.620928 1.1:-63030160 None:intergenic
TGTTGAAGTCGAGAAAATTG+AGG 0.626300 1.1:-63030128 None:intergenic
CACTCACAAACCACTCTCTG+AGG 0.631167 1.1:+63029739 MS.gene005377:CDS
AGGTAGTAGAAACTTCTAGA+GGG 0.636573 1.1:-63029880 None:intergenic
TCAGTGTACATTGATGGAGA+AGG 0.639172 1.1:-63030310 None:intergenic
TACAAGCAGAAGTTAAGGAA+AGG 0.639660 1.1:+63029163 MS.gene005377:CDS
TGTTTGTACCTGCTAGTTTG+GGG 0.646582 1.1:-63029261 None:intergenic
GAAAGGACTTTGGTCTCCAG+AGG 0.652425 1.1:+63029180 MS.gene005377:CDS
TTCTCCATCAATGTACACTG+AGG 0.764962 1.1:+63030312 MS.gene005377:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAAATTTAATCTTTTAC+AGG + chr1.1:63029353-63029372 MS.gene005377:intron 10.0%
!!! TTTTTTTTATACTATAGTTT+TGG + chr1.1:63029566-63029585 MS.gene005377:intron 10.0%
!! ACAATGAGATTAAAAATCTA+TGG + chr1.1:63029669-63029688 MS.gene005377:CDS 20.0%
! AACATTAACAACACAAACAA+CGG + chr1.1:63030217-63030236 MS.gene005377:CDS 25.0%
! ACTTTCTGATATATATAGCA+AGG + chr1.1:63030408-63030427 MS.gene005377:CDS 25.0%
! CATTTCATTTCTTCTTGTAA+CGG - chr1.1:63030250-63030269 None:intergenic 25.0%
! TAAGATGGATAAATTACTTG+AGG + chr1.1:63029405-63029424 MS.gene005377:CDS 25.0%
!! TGAAATTGAAGCTTTTTGAT+TGG - chr1.1:63029804-63029823 None:intergenic 25.0%
!!! GTTTTGGTTTAATTATGTGA+TGG + chr1.1:63029582-63029601 MS.gene005377:intron 25.0%
AAGAAAAGATTGAGACAAAG+TGG + chr1.1:63029704-63029723 MS.gene005377:CDS 30.0%
ATGAATTATTCCTAGATACC+AGG + chr1.1:63029933-63029952 MS.gene005377:CDS 30.0%
ATTTGTGAAGAAGTTGAAGT+TGG - chr1.1:63030055-63030074 None:intergenic 30.0%
CATCAAACTCATAACTTCAT+TGG - chr1.1:63029828-63029847 None:intergenic 30.0%
CGTTACAAGAAGAAATGAAA+TGG + chr1.1:63030248-63030267 MS.gene005377:CDS 30.0%
CTGAATTACATTACCAAACA+TGG + chr1.1:63029217-63029236 MS.gene005377:CDS 30.0%
GTGAAACAAATAGATGCATT+TGG - chr1.1:63030031-63030050 None:intergenic 30.0%
TGAACTATGGATCAAACATA+GGG + chr1.1:63029993-63030012 MS.gene005377:CDS 30.0%
TGGTATCTAGGAATAATTCA+TGG - chr1.1:63029934-63029953 None:intergenic 30.0%
TTGAACTATGGATCAAACAT+AGG + chr1.1:63029992-63030011 MS.gene005377:CDS 30.0%
! AATCTTTTACAGGTTTGCAA+AGG + chr1.1:63029363-63029382 MS.gene005377:intron 30.0%
!! TGTTGTTGCTTTATATCAGA+TGG + chr1.1:63029612-63029631 MS.gene005377:intron 30.0%
!!! AGCTTTTTGATTGGTTTTGT+TGG - chr1.1:63029795-63029814 None:intergenic 30.0%
AAATTGAGGGTGATACAGAA+TGG - chr1.1:63030117-63030136 None:intergenic 35.0%
ACATGTTAAGCCAACTGTTT+CGG + chr1.1:63030150-63030169 MS.gene005377:CDS 35.0%
AGAAGTTAAGGAAAGGACTT+TGG + chr1.1:63029170-63029189 MS.gene005377:CDS 35.0%
AGGTAGTAGAAACTTCTAGA+GGG - chr1.1:63029883-63029902 None:intergenic 35.0%
ATTGAACTTCATGCAGTACT+TGG + chr1.1:63029476-63029495 MS.gene005377:CDS 35.0%
CAGATGAATCATGTACTAGT+TGG + chr1.1:63030359-63030378 MS.gene005377:CDS 35.0%
CCTACAAAAGCTTCTATAGA+AGG + chr1.1:63029854-63029873 MS.gene005377:CDS 35.0%
GCTACTATTGTTGATCTTTG+AGG - chr1.1:63029903-63029922 None:intergenic 35.0%
GTTGAAGTCGAGAAAATTGA+GGG - chr1.1:63030130-63030149 None:intergenic 35.0%
TACAAGCAGAAGTTAAGGAA+AGG + chr1.1:63029163-63029182 MS.gene005377:CDS 35.0%
TACATTACCAAACATGGTCA+TGG + chr1.1:63029223-63029242 MS.gene005377:CDS 35.0%
TATGTTTGTACCTGCTAGTT+TGG - chr1.1:63029266-63029285 None:intergenic 35.0%
TCTGTTATGAAACCTGTTTC+TGG - chr1.1:63030343-63030362 None:intergenic 35.0%
TCTTTCCAGAACTTGAACTA+TGG + chr1.1:63029980-63029999 MS.gene005377:CDS 35.0%
TGATACAGAATGGAGCATAT+TGG - chr1.1:63030107-63030126 None:intergenic 35.0%
TGTTGAAGTCGAGAAAATTG+AGG - chr1.1:63030131-63030150 None:intergenic 35.0%
TTATTCCTAGATACCAGGTT+TGG + chr1.1:63029938-63029957 MS.gene005377:CDS 35.0%
! AATGCTCCTCTTTTCAAATC+AGG - chr1.1:63029431-63029450 None:intergenic 35.0%
! ATGTTTGTACCTGCTAGTTT+GGG - chr1.1:63029265-63029284 None:intergenic 35.0%
! CCTTCTATAGAAGCTTTTGT+AGG - chr1.1:63029857-63029876 None:intergenic 35.0%
! GGTTGATTCTGCATAAGAAA+TGG - chr1.1:63030292-63030311 None:intergenic 35.0%
! TTGATCCATAGTTCAAGTTC+TGG - chr1.1:63029988-63030007 None:intergenic 35.0%
AGAAGTTTCTCATCTTCCTC+TGG - chr1.1:63029199-63029218 None:intergenic 40.0%
ATCTCATTGTCTGTTCTTCC+TGG - chr1.1:63029659-63029678 None:intergenic 40.0%
GAGGTAGTAGAAACTTCTAG+AGG - chr1.1:63029884-63029903 None:intergenic 40.0%
TCAGTGTACATTGATGGAGA+AGG - chr1.1:63030313-63030332 None:intergenic 40.0%
TTAGCCTCAGTGTACATTGA+TGG - chr1.1:63030319-63030338 None:intergenic 40.0%
TTCTCCATCAATGTACACTG+AGG + chr1.1:63030312-63030331 MS.gene005377:CDS 40.0%
TTTACAGGTTTGCAAAGGTG+TGG + chr1.1:63029368-63029387 MS.gene005377:intron 40.0%
! CAGAGATTTTCAGTGGCTTT+TGG + chr1.1:63030436-63030455 MS.gene005377:CDS 40.0%
! TCATTTTCAACCTCAGAGAG+TGG - chr1.1:63029752-63029771 None:intergenic 40.0%
! TGTTTGTACCTGCTAGTTTG+GGG - chr1.1:63029264-63029283 None:intergenic 40.0%
! TTACAGGTTTGCAAAGGTGT+GGG + chr1.1:63029369-63029388 MS.gene005377:intron 40.0%
! TTCATGCAGTACTTGGTAAC+AGG + chr1.1:63029483-63029502 MS.gene005377:CDS 40.0%
! TTGAGGCCTGATTTGAAAAG+AGG + chr1.1:63029422-63029441 MS.gene005377:CDS 40.0%
ACTGAGGCTAAACCAGAAAC+AGG + chr1.1:63030328-63030347 MS.gene005377:CDS 45.0%
ACTGTTTCGGTTTCCTCAGA+CGG + chr1.1:63030163-63030182 MS.gene005377:CDS 45.0%
ACTTGAACTGCTACCAAACC+TGG - chr1.1:63029954-63029973 None:intergenic 45.0%
CAGATTGCAGCACAATTACC+AGG + chr1.1:63029638-63029657 MS.gene005377:CDS 45.0%
CCAAACATGGTCATGGATGT+TGG + chr1.1:63029230-63029249 MS.gene005377:CDS 45.0%
CCAACATCCATGACCATGTT+TGG - chr1.1:63029233-63029252 None:intergenic 45.0%
CTCAGACGGAGTTCATAACT+GGG + chr1.1:63030177-63030196 MS.gene005377:CDS 45.0%
GCTGCTACAAGCAGAAGTTA+AGG + chr1.1:63029158-63029177 MS.gene005377:CDS 45.0%
GGAAGAGTTGCAGGTTAAGA+TGG + chr1.1:63029390-63029409 MS.gene005377:CDS 45.0%
TCTGAGGAAACCGAAACAGT+TGG - chr1.1:63030163-63030182 None:intergenic 45.0%
TGCTACCAAACCTGGTATCT+AGG - chr1.1:63029946-63029965 None:intergenic 45.0%
! GAGAGTGGTTTGTGAGTGTT+TGG - chr1.1:63029737-63029756 None:intergenic 45.0%
! GGATCTGCAGAGATTTTCAG+TGG + chr1.1:63030429-63030448 MS.gene005377:CDS 45.0%
AGTTCTGTCCCCAAACTAGC+AGG + chr1.1:63029253-63029272 MS.gene005377:CDS 50.0%
CACTCACAAACCACTCTCTG+AGG + chr1.1:63029739-63029758 MS.gene005377:CDS 50.0%
CCAGTTATGAACTCCGTCTG+AGG - chr1.1:63030179-63030198 None:intergenic 50.0%
CCTCAGACGGAGTTCATAAC+TGG + chr1.1:63030176-63030195 MS.gene005377:CDS 50.0%
GAAAGGACTTTGGTCTCCAG+AGG + chr1.1:63029180-63029199 MS.gene005377:CDS 50.0%
! AAAGGTGTGGGAAGAGTTGC+AGG + chr1.1:63029381-63029400 MS.gene005377:CDS 50.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 63029142 63030471 63029142 ID=MS.gene005377
chr1.1 mRNA 63029142 63030471 63029142 ID=MS.gene005377.t1;Parent=MS.gene005377
chr1.1 exon 63029142 63029274 63029142 ID=MS.gene005377.t1.exon1;Parent=MS.gene005377.t1
chr1.1 CDS 63029142 63029274 63029142 ID=cds.MS.gene005377.t1;Parent=MS.gene005377.t1
chr1.1 exon 63029375 63029504 63029375 ID=MS.gene005377.t1.exon2;Parent=MS.gene005377.t1
chr1.1 CDS 63029375 63029504 63029375 ID=cds.MS.gene005377.t1;Parent=MS.gene005377.t1
chr1.1 exon 63029631 63030471 63029631 ID=MS.gene005377.t1.exon3;Parent=MS.gene005377.t1
chr1.1 CDS 63029631 63030471 63029631 ID=cds.MS.gene005377.t1;Parent=MS.gene005377.t1
Gene Sequence

>MS.gene005377

ATGGGAAGACATTCTTGCTGCTACAAGCAGAAGTTAAGGAAAGGACTTTGGTCTCCAGAGGAAGATGAGAAACTTCTGAATTACATTACCAAACATGGTCATGGATGTTGGAGTTCTGTCCCCAAACTAGCAGGTACAAACATACATATATTATATATTAATATTGTATATATTGTTCTTTCAATGCTTCATTCATACATTTTCATCTGATATATAAATTTAATCTTTTACAGGTTTGCAAAGGTGTGGGAAGAGTTGCAGGTTAAGATGGATAAATTACTTGAGGCCTGATTTGAAAAGAGGAGCATTCTCACAACAAGAAGAGAATTTGATCATTGAACTTCATGCAGTACTTGGTAACAGGTAATTGTAATTCATTTGAGAAACTATAATAACTATTTTTCATAAGTTCTTTTTTTTTATTTTTTTTTTATACTATAGTTTTGGTTTAATTATGTGATGGAATTAATTGTTGTTGCTTTATATCAGATGGTCTCAGATTGCAGCACAATTACCAGGAAGAACAGACAATGAGATTAAAAATCTATGGAATTCATGTCTCAAGAAAAGATTGAGACAAAGTGGCATTGATCCAAACACTCACAAACCACTCTCTGAGGTTGAAAATGACAATGAAAAATCACTCACATCCAACAAAACCAATCAAAAAGCTTCAATTTCATCCAATGAAGTTATGAGTTTGATGATTGAACCTACAAAAGCTTCTATAGAAGGATACCCTCTAGAAGTTTCTACTACCTCAAAGATCAACAATAGTAGCAGCAGCAGCCATGAATTATTCCTAGATACCAGGTTTGGTAGCAGTTCAAGTTATTTTTCTTTCCAGAACTTGAACTATGGATCAAACATAGGGATTTCTGAAAATCCAAATGCATCTATTTGTTTCACACCAACTTCAACTTCTTCACAAATTATGTCAGATACAAATTCTGTTATAACTTCCAATATGCTCCATTCTGTATCACCCTCAATTTTCTCGACTTCAACACATGTTAAGCCAACTGTTTCGGTTTCCTCAGACGGAGTTCATAACTGGGAAGCAAGTAACTACAACAACATTAACAACACAAACAACGGCGCGCTACCGTTACAAGAAGAAATGAAATGGTCTGAGTATCTTAACACACCATTTCTTATGCAGAATCAACCTTCTCCATCAATGTACACTGAGGCTAAACCAGAAACAGGTTTCATAACAGATGAATCATGTACTAGTTGGCAGCAGCAGCAGCAACAAAATTTTCAACTTTCTGATATATATAGCAAGGATCTGCAGAGATTTTCAGTGGCTTTTGGACAAACTATGTAG
Protein sequence

>MS.gene005377.t1

MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQSGIDPNTHKPLSEVENDNEKSLTSNKTNQKASISSNEVMSLMIEPTKASIEGYPLEVSTTSKINNSSSSSHELFLDTRFGSSSSYFSFQNLNYGSNIGISENPNASICFTPTSTSSQIMSDTNSVITSNMLHSVSPSIFSTSTHVKPTVSVSSDGVHNWEASNYNNINNTNNGALPLQEEMKWSEYLNTPFLMQNQPSPSMYTEAKPETGFITDESCTSWQQQQQQNFQLSDIYSKDLQRFSVAFGQTM