AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005418

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005418.t1 MTR_1g085770 66.997 303 35 6 1 244 1 297 1.54e-117 341
MS.gene005418.t1 MTR_1g085880 89.447 199 15 2 1 198 1 194 7.70e-113 325
MS.gene005418.t1 MTR_5g088080 57.261 241 71 8 12 230 13 243 2.30e-77 237
MS.gene005418.t1 MTR_5g088150 57.261 241 71 8 12 230 13 243 2.30e-77 237
MS.gene005418.t1 MTR_5g488210 57.261 241 71 8 12 230 13 243 2.30e-77 237
MS.gene005418.t1 MTR_5g088640 53.309 272 88 10 12 253 13 275 6.39e-76 234
MS.gene005418.t1 MTR_5g062790 50.699 286 79 10 12 245 10 285 8.71e-75 232
MS.gene005418.t1 MTR_5g088610 69.231 195 34 5 12 199 10 185 2.32e-73 230
MS.gene005418.t1 MTR_5g488170 56.444 225 69 6 12 216 13 228 5.14e-73 225
MS.gene005418.t1 MTR_4g128190 47.390 249 96 10 1 231 1 232 2.49e-58 187
MS.gene005418.t1 MTR_8g042410 40.704 199 98 6 11 191 37 233 7.75e-40 147
MS.gene005418.t1 MTR_1g083630 45.789 190 88 5 10 187 11 197 1.23e-39 147
MS.gene005418.t1 MTR_1g021230 46.951 164 74 5 11 167 57 214 1.29e-37 139
MS.gene005418.t1 MTR_3g052430 56.897 116 48 2 11 126 41 154 1.58e-37 140
MS.gene005418.t1 MTR_3g052450 56.034 116 49 2 11 126 40 153 7.18e-37 138
MS.gene005418.t1 MTR_4g091490 52.893 121 54 3 8 127 10 128 7.72e-36 132
MS.gene005418.t1 MTR_2g011660 54.701 117 50 3 8 123 10 124 2.36e-35 131
MS.gene005418.t1 MTR_3g011610 48.819 127 62 3 11 136 37 161 2.75e-35 134
MS.gene005418.t1 MTR_2g089620 53.913 115 50 3 11 124 12 124 7.07e-35 129
MS.gene005418.t1 MTR_2g088170 55.932 118 50 2 11 128 29 144 1.46e-34 131
MS.gene005418.t1 MTR_7g110830 45.098 153 79 4 4 155 5 153 2.62e-34 129
MS.gene005418.t1 MTR_4g065017 54.128 109 48 2 7 115 13 119 1.41e-33 126
MS.gene005418.t1 MTR_1g085040 50.413 121 57 3 4 123 5 123 2.86e-33 126
MS.gene005418.t1 MTR_5g029840 56.190 105 44 2 11 115 12 114 3.23e-33 125
MS.gene005418.t1 MTR_1g017000 33.617 235 129 10 9 228 10 232 6.95e-33 122
MS.gene005418.t1 MTR_1g076150 53.333 105 47 2 11 115 12 114 8.36e-33 122
MS.gene005418.t1 MTR_5g007370 52.174 115 52 3 11 124 12 124 1.05e-32 123
MS.gene005418.t1 MTR_1g085640 41.250 160 85 5 4 162 5 156 1.46e-32 124
MS.gene005418.t1 MTR_3g077110 47.692 130 60 4 9 132 10 137 1.58e-32 124
MS.gene005418.t1 MTR_7g115650 50.476 105 50 2 11 115 12 114 3.26e-32 119
MS.gene005418.t1 MTR_8g017440 48.387 124 60 4 4 125 5 126 3.34e-32 122
MS.gene005418.t1 MTR_3g074520 50.435 115 54 3 11 124 12 124 3.85e-32 122
MS.gene005418.t1 MTR_7g076740 50.427 117 54 4 9 123 10 124 4.71e-32 121
MS.gene005418.t1 MTR_2g097910 53.333 105 47 2 11 115 20 122 5.28e-32 121
MS.gene005418.t1 MTR_4g478180 51.304 115 53 3 11 124 13 125 6.14e-32 122
MS.gene005418.t1 MTR_7g111290 53.271 107 48 2 4 110 5 109 8.97e-32 122
MS.gene005418.t1 MTR_1g112760 49.138 116 56 3 9 123 11 124 1.02e-31 118
MS.gene005418.t1 MTR_3g028740 50.909 110 52 2 6 115 17 124 1.34e-31 121
MS.gene005418.t1 MTR_1g043080 50.467 107 51 2 9 115 10 114 2.05e-31 118
MS.gene005418.t1 MTR_1g100653 46.847 111 57 2 11 121 12 120 2.08e-31 119
MS.gene005418.t1 MTR_3g461490 49.565 115 55 3 11 124 12 124 3.27e-31 119
MS.gene005418.t1 MTR_4g105130 47.107 121 61 3 4 123 5 123 4.92e-31 120
MS.gene005418.t1 MTR_4g121460 41.935 155 79 4 11 156 12 164 9.28e-31 119
MS.gene005418.t1 MTR_8g095390 50.926 108 51 2 17 123 17 123 1.38e-30 117
MS.gene005418.t1 MTR_1g043050 50.467 107 51 2 9 115 10 114 1.53e-30 116
MS.gene005418.t1 MTR_2g064160 42.657 143 73 4 1 142 1 135 1.60e-30 117
MS.gene005418.t1 MTR_0008s0390 43.066 137 68 4 11 147 13 139 1.88e-30 116
MS.gene005418.t1 MTR_0251s0050 46.789 109 56 2 11 119 13 119 1.98e-30 116
MS.gene005418.t1 MTR_2g089450 50.476 105 50 2 11 115 12 114 2.33e-30 115
MS.gene005418.t1 MTR_6g006030 43.077 130 72 2 2 131 5 132 3.00e-30 114
MS.gene005418.t1 MTR_8g098860 46.957 115 59 2 4 118 5 117 4.06e-30 116
MS.gene005418.t1 MTR_4g082290 47.368 114 57 3 11 123 12 123 4.11e-30 118
MS.gene005418.t1 MTR_1g017140 52.830 106 47 3 11 115 12 115 4.36e-30 117
MS.gene005418.t1 MTR_2g099740 46.281 121 62 3 4 123 5 123 4.97e-30 118
MS.gene005418.t1 MTR_4g073420 49.074 108 53 2 17 123 17 123 5.83e-30 115
MS.gene005418.t1 MTR_6g009430 43.262 141 76 4 11 149 12 150 7.09e-30 116
MS.gene005418.t1 MTR_0008s0470 41.379 145 68 4 11 147 13 148 7.16e-30 115
MS.gene005418.t1 MTR_5g010020 48.148 108 54 2 4 111 5 110 7.25e-30 116
MS.gene005418.t1 MTR_8g017500 45.455 121 63 3 4 123 5 123 7.26e-30 116
MS.gene005418.t1 MTR_7g011170 46.087 115 59 3 11 124 12 124 8.16e-30 115
MS.gene005418.t1 MTR_5g014990 51.887 106 48 3 11 115 12 115 8.24e-30 115
MS.gene005418.t1 MTR_4g082230 46.957 115 58 3 10 123 11 123 8.42e-30 117
MS.gene005418.t1 MTR_7g035075 49.057 106 52 2 11 116 14 117 9.68e-30 112
MS.gene005418.t1 MTR_3g097450 49.074 108 53 2 17 123 17 123 1.17e-29 115
MS.gene005418.t1 MTR_5g079670 38.194 144 86 3 11 153 11 152 1.60e-29 112
MS.gene005418.t1 MTR_0008s0280 50.000 104 50 2 12 115 13 114 1.83e-29 112
MS.gene005418.t1 MTR_1g086530 47.706 109 55 2 11 119 33 139 2.06e-29 114
MS.gene005418.t1 MTR_8g017540 47.321 112 57 2 4 115 51 160 2.26e-29 116
MS.gene005418.t1 MTR_1g110460 35.897 195 113 6 11 202 26 211 2.35e-29 114
MS.gene005418.t1 MTR_2g034790 37.500 184 107 5 11 193 12 188 2.78e-29 114
MS.gene005418.t1 MTR_2g095520 53.922 102 44 3 11 111 12 111 2.87e-29 114
MS.gene005418.t1 MTR_4g057635 51.887 106 48 3 11 115 12 115 3.25e-29 114
MS.gene005418.t1 MTR_4g097570 53.465 101 44 3 11 110 12 110 3.38e-29 113
MS.gene005418.t1 MTR_6g012690 45.217 115 60 3 11 124 12 124 5.68e-29 114
MS.gene005418.t1 MTR_7g087130 49.524 105 51 2 11 115 12 114 7.84e-29 113
MS.gene005418.t1 MTR_8g031360 48.598 107 52 3 11 116 13 117 8.70e-29 112
MS.gene005418.t1 MTR_6g012180 50.495 101 48 2 11 111 12 110 1.03e-28 112
MS.gene005418.t1 MTR_3g103570 42.759 145 73 5 11 149 12 152 1.11e-28 113
MS.gene005418.t1 MTR_7g102110 50.943 106 49 3 11 115 12 115 1.28e-28 111
MS.gene005418.t1 MTR_0140s0030 50.000 106 50 3 11 115 13 116 1.47e-28 112
MS.gene005418.t1 MTR_0489s0020 50.000 106 50 3 11 115 13 116 1.47e-28 112
MS.gene005418.t1 MTR_1g073170 47.321 112 57 2 4 115 13 122 1.60e-28 110
MS.gene005418.t1 MTR_8g020490 49.515 103 50 2 9 111 6 106 1.94e-28 110
MS.gene005418.t1 MTR_6g090405 47.321 112 56 3 10 120 11 120 2.66e-28 110
MS.gene005418.t1 MTR_2g089420 42.647 136 62 3 8 143 8 127 2.95e-28 114
MS.gene005418.t1 MTR_3g039990 48.571 105 52 2 11 115 13 115 4.10e-28 111
MS.gene005418.t1 MTR_1g100667 49.541 109 53 2 7 115 9 115 4.42e-28 110
MS.gene005418.t1 MTR_7g096930 47.619 105 53 2 11 115 12 114 6.95e-28 109
MS.gene005418.t1 MTR_8g027345 49.474 95 47 1 17 111 17 110 7.31e-28 110
MS.gene005418.t1 MTR_7g010210 47.619 105 53 2 11 115 12 114 7.56e-28 109
MS.gene005418.t1 MTR_4g100720 44.248 113 61 2 7 119 9 119 1.28e-27 106
MS.gene005418.t1 MTR_4g128670 50.980 102 47 3 11 111 12 111 1.28e-27 110
MS.gene005418.t1 MTR_7g010210 47.619 105 53 2 11 115 12 114 1.32e-27 110
MS.gene005418.t1 MTR_4g097570 52.941 102 44 4 11 110 12 111 1.41e-27 109
MS.gene005418.t1 MTR_7g117730 46.316 95 50 1 17 111 17 110 1.47e-27 108
MS.gene005418.t1 MTR_8g017340 42.254 142 73 5 4 138 5 144 1.61e-27 112
MS.gene005418.t1 MTR_3g083540 45.614 114 59 3 11 123 41 152 1.72e-27 109
MS.gene005418.t1 MTR_6g055910 38.217 157 85 4 6 155 9 160 2.52e-27 108
MS.gene005418.t1 MTR_0063s0090 38.621 145 81 3 11 155 12 148 2.79e-27 106
MS.gene005418.t1 MTR_4g029540 37.430 179 99 6 11 178 10 186 2.94e-27 108
MS.gene005418.t1 MTR_4g125520 47.525 101 51 2 11 111 12 110 3.25e-27 108
MS.gene005418.t1 MTR_8g017350 41.549 142 74 5 4 138 5 144 5.33e-27 111
MS.gene005418.t1 MTR_2g067420 51.961 102 47 2 10 111 13 112 9.81e-27 107
MS.gene005418.t1 MTR_1g062940 40.876 137 79 2 11 147 6 140 1.45e-26 104
MS.gene005418.t1 MTR_1g045610 47.475 99 51 1 17 115 26 123 1.48e-26 105
MS.gene005418.t1 MTR_5g078140 46.087 115 59 3 11 124 12 124 2.27e-26 106
MS.gene005418.t1 MTR_3g065440 44.167 120 64 3 11 129 12 129 2.36e-26 106
MS.gene005418.t1 MTR_8g017390 45.133 113 59 3 4 115 5 115 3.92e-26 108
MS.gene005418.t1 MTR_1g086510 43.119 109 60 2 11 119 21 127 4.18e-26 104
MS.gene005418.t1 MTR_4g485530 46.602 103 53 2 13 115 14 114 7.74e-26 102
MS.gene005418.t1 MTR_0197s0010 45.098 102 55 1 14 115 3 103 1.09e-25 102
MS.gene005418.t1 MTR_4g102380 44.348 115 61 3 11 124 12 124 1.21e-25 103
MS.gene005418.t1 MTR_7g109320 52.475 101 46 2 11 111 12 110 1.46e-25 105
MS.gene005418.t1 MTR_0247s0040 45.192 104 55 2 11 114 7 108 2.81e-25 100
MS.gene005418.t1 MTR_5g078910 43.925 107 58 2 9 115 5 109 3.25e-25 103
MS.gene005418.t1 MTR_5g042030 45.614 114 59 3 11 123 7 118 4.32e-25 102
MS.gene005418.t1 MTR_8g006470 45.872 109 56 3 11 118 10 116 1.33e-24 101
MS.gene005418.t1 MTR_5g079120 44.037 109 58 3 8 115 57 163 1.64e-24 101
MS.gene005418.t1 MTR_2g033170 44.954 109 58 2 11 119 24 130 2.52e-24 101
MS.gene005418.t1 MTR_5g078930 41.346 104 60 1 8 111 5 107 2.63e-24 98.6
MS.gene005418.t1 MTR_4g063100 40.164 122 68 3 5 123 1 120 4.98e-24 99.0
MS.gene005418.t1 MTR_0193s0090 38.168 131 74 3 11 136 7 135 5.45e-24 97.4
MS.gene005418.t1 MTR_5g079290 41.905 105 59 2 11 115 17 119 1.08e-23 98.2
MS.gene005418.t1 MTR_5g078950 41.121 107 62 1 8 114 3 108 1.73e-23 97.8
MS.gene005418.t1 MTR_5g078860 44.762 105 56 2 11 115 7 109 3.57e-23 97.4
MS.gene005418.t1 MTR_5g079220 41.121 107 61 2 9 115 19 123 1.33e-22 95.5
MS.gene005418.t1 MTR_8g060940 42.574 101 56 2 11 111 7 105 1.83e-22 94.4
MS.gene005418.t1 MTR_2g096380 41.818 110 62 2 6 115 1 108 3.71e-22 93.2
MS.gene005418.t1 MTR_5g078800 42.857 105 58 2 11 115 7 109 8.62e-22 92.8
MS.gene005418.t1 MTR_7g017260 41.748 103 56 3 11 111 25 125 3.20e-21 91.7
MS.gene005418.t1 MTR_3g101290 41.509 106 60 2 17 122 40 143 3.32e-21 90.5
MS.gene005418.t1 MTR_5g016510 47.000 100 50 3 17 115 8 105 3.37e-21 92.4
MS.gene005418.t1 MTR_0001s0360 39.252 107 63 2 9 115 5 109 4.04e-21 90.9
MS.gene005418.t1 MTR_4g123040 43.810 105 57 2 11 115 24 126 4.18e-21 92.0
MS.gene005418.t1 MTR_3g045430 38.393 112 67 2 13 123 14 124 2.72e-20 89.4
MS.gene005418.t1 MTR_7g111290 55.224 67 29 1 44 110 2 67 2.80e-20 90.1
MS.gene005418.t1 MTR_7g035350 45.455 99 52 2 16 114 227 323 3.03e-20 91.3
MS.gene005418.t1 MTR_6g015455 46.809 94 48 2 17 110 8 99 3.18e-20 92.0
MS.gene005418.t1 MTR_5g007300 51.316 76 36 1 11 86 64 138 1.12e-19 84.0
MS.gene005418.t1 MTR_3g077650 40.541 111 62 3 17 125 184 292 1.15e-19 89.4
MS.gene005418.t1 MTR_5g070020 41.284 109 61 3 7 115 116 221 1.86e-19 87.8
MS.gene005418.t1 MTR_3g463400 39.640 111 64 3 6 116 126 233 2.54e-19 88.6
MS.gene005418.t1 MTR_4g019370 40.952 105 60 2 17 121 41 143 2.56e-19 87.4
MS.gene005418.t1 MTR_4g105660 28.631 241 140 8 17 229 183 419 3.09e-19 88.2
MS.gene005418.t1 MTR_6g055910 50.685 73 35 1 45 117 18 89 5.25e-19 85.1
MS.gene005418.t1 MTR_5g049190 38.211 123 72 3 17 139 22 140 8.53e-19 84.3
MS.gene005418.t1 MTR_6g027340 38.679 106 63 2 17 122 19 122 1.23e-18 83.2
MS.gene005418.t1 MTR_4g063100 50.000 72 35 1 44 115 10 80 5.22e-18 81.6
MS.gene005418.t1 MTR_4g094982 44.000 100 53 3 17 115 8 105 8.24e-18 82.0
MS.gene005418.t1 MTR_6g074860 40.196 102 56 3 17 115 7 106 9.24e-18 81.3
MS.gene005418.t1 MTR_6g027360 36.752 117 71 3 8 124 73 186 1.48e-17 82.0
MS.gene005418.t1 MTR_7g451170 40.000 100 58 2 17 116 194 291 1.57e-17 82.8
MS.gene005418.t1 MTR_4g088015 41.000 100 57 2 17 116 224 321 4.08e-17 82.0
MS.gene005418.t1 MTR_2g096380 48.611 72 36 1 44 115 19 89 4.45e-17 79.0
MS.gene005418.t1 MTR_1g057980 40.385 104 59 3 11 114 78 178 1.27e-16 79.3
MS.gene005418.t1 MTR_5g082910 42.105 95 53 2 17 111 22 114 1.34e-16 79.0
MS.gene005418.t1 MTR_7g061330 29.752 242 158 7 6 239 70 307 1.53e-16 80.5
MS.gene005418.t1 MTR_7g061330 35.238 105 59 3 9 110 22 120 1.06e-12 68.9
MS.gene005418.t1 MTR_7g061550 38.182 110 65 2 11 118 4 112 1.93e-16 79.3
MS.gene005418.t1 MTR_7g061330 29.752 242 158 7 6 239 106 343 2.41e-16 79.7
MS.gene005418.t1 MTR_7g061330 35.238 105 59 3 9 110 58 156 1.25e-12 68.6
MS.gene005418.t1 MTR_7g461410 29.752 242 158 7 6 239 106 343 2.41e-16 79.7
MS.gene005418.t1 MTR_7g461410 35.238 105 59 3 9 110 58 156 1.25e-12 68.6
MS.gene005418.t1 MTR_5g010650 40.952 105 59 3 6 110 103 204 2.41e-16 79.7
MS.gene005418.t1 MTR_7g037260 37.624 101 61 2 17 117 148 246 3.06e-16 79.0
MS.gene005418.t1 MTR_4g082040 38.462 104 59 3 17 117 108 209 3.04e-15 76.3
MS.gene005418.t1 MTR_1g026870 36.364 110 67 3 6 115 78 184 3.28e-15 76.6
MS.gene005418.t1 MTR_1g026870 36.449 107 56 3 9 110 29 128 5.29e-14 73.2
MS.gene005418.t1 MTR_3g110028 36.364 110 67 3 6 115 78 184 4.10e-15 76.6
MS.gene005418.t1 MTR_3g110028 37.383 107 55 3 9 110 29 128 2.24e-14 74.3
MS.gene005418.t1 MTR_0023s0210 45.070 71 38 1 11 81 7 76 4.80e-15 69.7
MS.gene005418.t1 MTR_3g089045 39.423 104 58 3 17 117 19 120 8.99e-15 73.9
MS.gene005418.t1 MTR_5g041570 37.500 104 60 3 17 117 137 238 1.05e-14 74.7
MS.gene005418.t1 MTR_7g450950 36.735 98 60 2 17 114 160 255 1.43e-14 73.6
MS.gene005418.t1 MTR_7g037130 37.755 98 59 2 17 114 148 243 2.35e-14 73.2
MS.gene005418.t1 MTR_6g027370 35.897 117 73 2 8 124 93 207 2.38e-14 73.2
MS.gene005418.t1 MTR_5g038910 33.577 137 84 3 7 143 19 148 3.81e-14 72.8
MS.gene005418.t1 MTR_5g038910 33.577 137 84 3 7 143 19 148 4.13e-14 73.2
MS.gene005418.t1 MTR_7g086960 31.410 156 105 2 17 172 92 245 8.17e-14 71.6
MS.gene005418.t1 MTR_8g468380 31.304 115 77 2 7 121 15 127 4.36e-12 66.6
MS.gene005418.t1 MTR_6g013135 28.571 210 98 9 81 286 138 299 2.47e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005418.t1 AT2G26960 46.541 159 74 4 9 158 18 174 4.49e-40 145
MS.gene005418.t1 AT5G55020 53.782 119 53 2 11 129 26 142 2.63e-38 142
MS.gene005418.t1 AT2G32460 44.099 161 78 3 6 166 1 149 2.76e-38 141
MS.gene005418.t1 AT2G32460 43.293 164 81 3 3 166 10 161 4.12e-38 141
MS.gene005418.t1 AT3G11440 54.400 125 53 3 11 135 41 161 1.85e-37 139
MS.gene005418.t1 AT5G06100 55.652 115 49 2 11 125 32 144 5.26e-37 137
MS.gene005418.t1 AT3G11440 55.085 118 51 2 11 128 41 156 5.59e-37 139
MS.gene005418.t1 AT3G11440 55.085 118 51 2 11 128 41 156 5.59e-37 139
MS.gene005418.t1 AT3G11440 55.085 118 51 2 11 128 41 156 5.59e-37 139
MS.gene005418.t1 AT5G06100 55.652 115 49 2 11 125 32 144 1.06e-36 138
MS.gene005418.t1 AT5G06100 55.652 115 49 2 11 125 32 144 1.06e-36 138
MS.gene005418.t1 AT5G06100 55.652 115 49 2 11 125 32 144 1.06e-36 138
MS.gene005418.t1 AT5G06100 55.652 115 49 2 11 125 32 144 1.06e-36 138
MS.gene005418.t1 AT4G26930 53.043 115 52 2 11 125 19 131 1.94e-36 135
MS.gene005418.t1 AT4G21440 56.140 114 47 3 11 123 12 123 7.84e-36 132
MS.gene005418.t1 AT2G26950 46.043 139 74 1 5 143 9 146 1.44e-35 132
MS.gene005418.t1 AT5G54230 42.012 169 91 4 11 174 12 178 2.84e-35 130
MS.gene005418.t1 AT5G26660 52.586 116 52 3 9 123 10 123 2.33e-34 129
MS.gene005418.t1 AT4G01680 43.151 146 80 3 4 148 5 148 7.16e-34 124
MS.gene005418.t1 AT4G28110 53.509 114 50 3 11 123 12 123 1.64e-33 124
MS.gene005418.t1 AT4G05100 53.509 114 50 3 11 123 13 124 3.11e-33 125
MS.gene005418.t1 AT4G01680 43.151 146 80 3 4 148 5 148 3.86e-33 125
MS.gene005418.t1 AT1G57560 50.000 122 58 3 4 124 5 124 7.14e-33 123
MS.gene005418.t1 AT1G57560 50.000 122 58 3 4 124 5 124 1.63e-32 123
MS.gene005418.t1 AT5G16770 52.381 105 48 2 11 115 12 114 3.59e-32 122
MS.gene005418.t1 AT5G16770 52.381 105 48 2 11 115 12 114 3.59e-32 122
MS.gene005418.t1 AT5G16770 52.381 105 48 2 11 115 12 114 6.99e-32 122
MS.gene005418.t1 AT5G16770 52.381 105 48 2 11 115 12 114 6.99e-32 122
MS.gene005418.t1 AT3G61250 48.246 114 56 3 11 123 12 123 1.11e-31 120
MS.gene005418.t1 AT3G08500 51.887 106 49 2 10 115 29 132 1.18e-31 121
MS.gene005418.t1 AT5G12870 52.336 107 49 2 9 115 16 120 1.19e-31 119
MS.gene005418.t1 AT1G09540 49.587 121 58 3 4 123 5 123 1.23e-31 121
MS.gene005418.t1 AT5G10280 51.304 115 53 3 11 124 12 124 1.24e-31 121
MS.gene005418.t1 AT1G74080 38.587 184 84 7 11 170 12 190 2.12e-31 120
MS.gene005418.t1 AT3G02940 52.381 105 48 2 11 115 12 114 2.96e-31 119
MS.gene005418.t1 AT3G12720 47.107 121 61 3 10 129 21 139 5.36e-31 119
MS.gene005418.t1 AT3G02940 52.381 105 48 2 11 115 12 114 6.75e-31 119
MS.gene005418.t1 AT3G02940 52.381 105 48 2 11 115 12 114 6.75e-31 119
MS.gene005418.t1 AT3G13890 48.214 112 56 2 4 115 5 114 7.38e-31 119
MS.gene005418.t1 AT1G22640 49.123 114 55 3 11 123 12 123 1.29e-30 116
MS.gene005418.t1 AT4G37780 51.887 106 48 3 11 115 12 115 1.36e-30 117
MS.gene005418.t1 AT4G09460 49.074 108 53 2 17 123 17 123 1.40e-30 115
MS.gene005418.t1 AT5G65230 51.304 115 53 3 11 124 12 124 1.40e-30 117
MS.gene005418.t1 AT4G38620 50.926 108 51 2 17 123 17 123 1.49e-30 117
MS.gene005418.t1 AT1G34670 50.435 115 54 3 11 124 12 124 1.84e-30 118
MS.gene005418.t1 AT5G56110 47.826 115 57 3 11 124 12 124 2.70e-30 117
MS.gene005418.t1 AT1G35515 50.000 108 52 2 17 123 17 123 3.05e-30 114
MS.gene005418.t1 AT4G17785 50.926 108 51 2 8 115 10 115 4.18e-30 117
MS.gene005418.t1 AT4G17785 50.926 108 51 2 8 115 10 115 4.68e-30 117
MS.gene005418.t1 AT5G14750 50.000 104 50 2 8 111 13 114 4.96e-30 113
MS.gene005418.t1 AT3G28470 53.465 101 45 2 11 111 12 110 5.53e-30 116
MS.gene005418.t1 AT4G34990 49.074 108 53 2 17 123 17 123 5.83e-30 115
MS.gene005418.t1 AT5G15310 48.571 105 52 2 11 115 12 114 6.81e-30 114
MS.gene005418.t1 AT1G63910 47.826 115 58 2 4 118 5 117 8.16e-30 117
MS.gene005418.t1 AT2G16720 49.074 108 53 2 17 123 17 123 9.17e-30 114
MS.gene005418.t1 AT4G01680 39.873 158 80 4 4 148 5 160 9.52e-30 116
MS.gene005418.t1 AT3G01140 46.087 115 59 3 11 124 12 124 1.21e-29 115
MS.gene005418.t1 AT3G01530 45.299 117 59 2 4 116 13 128 1.33e-29 112
MS.gene005418.t1 AT3G01140 46.087 115 59 3 11 124 55 167 1.42e-29 116
MS.gene005418.t1 AT5G15310 46.087 115 59 3 11 124 12 124 2.78e-29 114
MS.gene005418.t1 AT5G15310 46.087 115 59 3 11 124 12 124 3.13e-29 114
MS.gene005418.t1 AT3G27920 49.074 108 53 2 8 115 11 116 3.24e-29 112
MS.gene005418.t1 AT3G49690 52.830 106 47 3 11 115 12 115 3.77e-29 114
MS.gene005418.t1 AT3G27810 49.057 106 52 2 11 116 20 123 3.77e-29 112
MS.gene005418.t1 AT5G40350 48.113 106 53 2 11 116 17 120 4.23e-29 111
MS.gene005418.t1 AT1G74650 48.571 105 52 2 11 115 12 114 4.33e-29 114
MS.gene005418.t1 AT1G18570 46.491 114 58 3 11 123 13 124 4.48e-29 114
MS.gene005418.t1 AT5G23000 50.467 107 50 3 10 115 11 115 4.86e-29 114
MS.gene005418.t1 AT5G62470 44.203 138 69 4 11 147 12 142 6.74e-29 114
MS.gene005418.t1 AT3G23250 47.619 105 53 2 11 115 12 114 6.96e-29 112
MS.gene005418.t1 AT1G16490 50.000 106 51 2 10 115 13 116 7.11e-29 112
MS.gene005418.t1 AT1G18710 44.348 115 61 3 11 124 12 124 7.38e-29 112
MS.gene005418.t1 AT1G08810 49.524 105 51 2 11 115 12 114 7.81e-29 112
MS.gene005418.t1 AT5G57620 50.943 106 49 3 11 115 12 115 8.43e-29 113
MS.gene005418.t1 AT3G13540 45.000 120 63 3 5 123 17 134 1.39e-28 110
MS.gene005418.t1 AT5G40330 49.038 104 51 2 12 115 13 114 1.48e-28 110
MS.gene005418.t1 AT1G06180 48.624 109 54 2 11 119 12 118 1.50e-28 110
MS.gene005418.t1 AT5G52600 48.515 101 50 2 11 111 12 110 1.56e-28 109
MS.gene005418.t1 AT5G07690 48.571 105 52 2 11 115 12 114 1.62e-28 112
MS.gene005418.t1 AT1G56160 50.000 106 51 2 10 115 13 116 1.63e-28 112
MS.gene005418.t1 AT1G79180 46.610 118 59 3 10 125 13 128 2.04e-28 111
MS.gene005418.t1 AT2G36890 43.089 123 67 3 11 132 12 132 2.63e-28 111
MS.gene005418.t1 AT1G48000 47.059 102 53 1 17 118 37 137 3.40e-28 109
MS.gene005418.t1 AT3G47600 47.619 105 53 2 11 115 12 114 3.72e-28 111
MS.gene005418.t1 AT5G07700 47.619 105 53 2 11 115 12 114 4.30e-28 111
MS.gene005418.t1 AT5G07700 47.619 105 53 2 11 115 12 114 4.30e-28 111
MS.gene005418.t1 AT5G61420 45.217 115 60 3 11 124 12 124 4.58e-28 112
MS.gene005418.t1 AT2G36890 43.089 123 67 3 11 132 53 173 4.79e-28 111
MS.gene005418.t1 AT5G65790 51.887 106 48 3 11 115 12 115 4.89e-28 112
MS.gene005418.t1 AT1G74430 44.348 115 61 3 11 124 12 124 5.40e-28 110
MS.gene005418.t1 AT5G60890 45.872 109 57 2 11 119 12 118 5.78e-28 110
MS.gene005418.t1 AT3G13890 44.628 121 56 3 4 115 5 123 6.55e-28 111
MS.gene005418.t1 AT3G28910 48.571 105 52 2 11 115 12 114 7.24e-28 110
MS.gene005418.t1 AT3G12820 49.057 106 52 2 10 115 13 116 7.52e-28 108
MS.gene005418.t1 AT2G47190 45.872 109 57 2 11 119 20 126 1.08e-27 109
MS.gene005418.t1 AT2G47460 49.505 101 49 2 11 111 12 110 1.54e-27 110
MS.gene005418.t1 AT5G62470 44.203 138 68 5 11 147 12 141 1.67e-27 110
MS.gene005418.t1 AT2G31180 45.714 105 55 2 11 115 12 114 1.90e-27 107
MS.gene005418.t1 AT1G66230 41.912 136 76 3 11 145 12 145 3.14e-27 108
MS.gene005418.t1 AT3G62610 44.628 121 64 3 11 130 12 130 3.29e-27 109
MS.gene005418.t1 AT5G62320 46.281 121 55 4 11 123 13 131 3.87e-27 107
MS.gene005418.t1 AT5G14340 47.368 114 57 3 11 123 24 135 4.92e-27 107
MS.gene005418.t1 AT1G68320 34.500 200 113 6 8 193 16 211 5.34e-27 107
MS.gene005418.t1 AT1G25340 45.631 103 55 1 17 119 23 124 5.82e-27 107
MS.gene005418.t1 AT5G49330 49.505 101 49 2 11 111 12 110 6.80e-27 108
MS.gene005418.t1 AT5G35550 43.363 113 62 2 3 115 6 116 1.17e-26 105
MS.gene005418.t1 AT4G13480 49.495 99 49 1 17 115 11 108 2.54e-26 105
MS.gene005418.t1 AT5G16600 40.602 133 76 3 11 142 12 142 3.40e-26 106
MS.gene005418.t1 AT3G30210 47.059 102 53 1 17 118 32 132 4.35e-26 105
MS.gene005418.t1 AT3G60460 45.872 109 56 3 11 118 11 117 7.69e-26 104
MS.gene005418.t1 AT3G24310 47.475 99 51 1 17 115 23 120 9.75e-26 103
MS.gene005418.t1 AT3G48920 44.545 110 60 1 6 115 12 120 3.13e-25 102
MS.gene005418.t1 AT4G22680 45.217 115 60 3 11 124 12 124 5.54e-25 101
MS.gene005418.t1 AT3G06490 46.789 109 56 2 11 119 19 125 7.54e-24 99.8
MS.gene005418.t1 AT1G66380 42.857 112 61 3 7 117 4 113 7.73e-24 95.1
MS.gene005418.t1 AT1G66370 42.727 110 60 3 9 117 6 113 8.91e-24 98.2
MS.gene005418.t1 AT4G12350 45.714 105 55 2 11 115 12 114 9.97e-24 99.0
MS.gene005418.t1 AT5G52260 43.382 136 73 3 9 142 10 143 1.06e-23 98.2
MS.gene005418.t1 AT1G25340 43.689 103 52 2 17 119 23 119 2.03e-23 97.8
MS.gene005418.t1 AT5G26660 50.000 86 41 2 39 123 8 92 2.21e-23 98.6
MS.gene005418.t1 AT1G25340 43.689 103 52 2 17 119 23 119 2.77e-23 97.8
MS.gene005418.t1 AT4G25560 45.794 107 56 2 9 115 8 112 3.50e-23 97.1
MS.gene005418.t1 AT3G53200 45.794 107 56 2 11 117 9 113 4.93e-23 95.9
MS.gene005418.t1 AT1G79180 37.086 151 58 4 10 125 13 161 5.61e-23 97.4
MS.gene005418.t1 AT5G59780 40.336 119 69 2 6 124 3 119 6.36e-23 95.5
MS.gene005418.t1 AT1G66390 41.964 112 62 3 7 117 4 113 6.60e-23 95.9
MS.gene005418.t1 AT1G56650 38.281 128 68 4 7 125 4 129 6.88e-23 95.5
MS.gene005418.t1 AT3G46130 44.444 99 54 1 17 115 14 111 2.61e-22 94.4
MS.gene005418.t1 AT5G49620 44.660 103 56 1 17 119 31 132 2.99e-22 95.1
MS.gene005418.t1 AT3G50060 43.396 106 58 2 17 122 9 112 1.64e-21 92.8
MS.gene005418.t1 AT4G18770 40.876 137 72 5 9 139 208 341 3.16e-21 94.0
MS.gene005418.t1 AT5G49620 39.167 120 52 2 17 119 31 146 6.02e-21 91.7
MS.gene005418.t1 AT5G40350 51.351 74 35 1 43 116 3 75 1.96e-20 87.0
MS.gene005418.t1 AT4G37260 44.860 107 56 3 17 122 16 120 4.48e-20 89.4
MS.gene005418.t1 AT3G27810 52.778 72 33 1 45 116 4 74 5.12e-20 86.3
MS.gene005418.t1 AT5G58850 44.037 109 58 3 7 115 99 204 1.35e-19 89.0
MS.gene005418.t1 AT5G67300 47.000 100 50 3 17 115 9 106 1.38e-19 87.8
MS.gene005418.t1 AT3G27785 41.748 103 57 3 17 118 192 292 1.55e-19 89.0
MS.gene005418.t1 AT2G23290 45.000 100 52 3 17 115 16 113 3.56e-19 86.7
MS.gene005418.t1 AT5G40360 41.414 99 56 2 17 115 161 257 4.19e-19 87.0
MS.gene005418.t1 AT2G25230 38.931 131 71 5 7 130 15 143 5.03e-19 84.7
MS.gene005418.t1 AT3G53200 52.055 73 34 1 45 117 9 80 1.27e-18 83.2
MS.gene005418.t1 AT5G11050 33.333 198 108 6 9 198 101 282 3.21e-18 85.1
MS.gene005418.t1 AT3G12820 55.224 67 29 1 49 115 3 68 3.58e-18 81.3
MS.gene005418.t1 AT1G17950 39.450 109 62 3 17 123 8 114 4.88e-18 82.4
MS.gene005418.t1 AT2G39880 39.695 131 76 3 17 146 53 181 1.18e-17 83.2
MS.gene005418.t1 AT5G35550 52.113 71 33 1 45 115 50 119 1.78e-17 80.9
MS.gene005418.t1 AT3G55730 40.566 106 61 2 10 115 52 155 1.01e-16 80.5
MS.gene005418.t1 AT5G14750 43.373 83 41 2 38 115 3 84 1.11e-16 76.6
MS.gene005418.t1 AT4G33450 36.792 106 65 2 17 122 22 125 1.25e-16 78.6
MS.gene005418.t1 AT3G46130 48.611 72 36 1 44 115 9 79 1.41e-16 77.8
MS.gene005418.t1 AT3G09370 35.374 147 91 4 6 151 128 271 1.69e-16 80.5
MS.gene005418.t1 AT3G09370 37.255 102 61 2 9 110 80 178 6.49e-14 72.4
MS.gene005418.t1 AT3G09370 35.374 147 91 4 6 151 123 266 1.75e-16 80.1
MS.gene005418.t1 AT3G09370 37.255 102 61 2 9 110 75 173 6.50e-14 72.4
MS.gene005418.t1 AT3G09370 35.374 147 91 4 6 151 136 279 1.82e-16 80.1
MS.gene005418.t1 AT3G09370 37.255 102 61 2 9 110 88 186 8.72e-14 72.0
MS.gene005418.t1 AT5G59780 45.000 80 43 1 45 124 20 98 3.66e-16 76.3
MS.gene005418.t1 AT3G46130 49.296 71 35 1 45 115 20 89 4.24e-16 76.6
MS.gene005418.t1 AT5G17800 35.135 148 85 5 4 143 84 228 4.45e-16 78.2
MS.gene005418.t1 AT3G09230 37.000 100 61 2 17 116 58 155 6.58e-16 78.2
MS.gene005418.t1 AT3G47600 46.479 71 37 1 45 115 39 108 8.94e-16 77.0
MS.gene005418.t1 AT2G37630 40.000 110 63 2 11 118 1 109 8.95e-16 77.4
MS.gene005418.t1 AT1G26780 37.143 105 63 3 17 120 101 203 1.62e-15 75.9
MS.gene005418.t1 AT1G26780 37.500 104 62 3 17 119 101 202 1.90e-15 76.6
MS.gene005418.t1 AT5G02320 37.273 110 66 3 6 115 60 166 1.99e-15 77.0
MS.gene005418.t1 AT5G02320 36.275 102 62 2 9 110 12 110 1.75e-13 71.2
MS.gene005418.t1 AT1G69560 37.895 95 57 2 17 111 110 202 2.23e-15 75.9
MS.gene005418.t1 AT4G00540 37.313 134 73 6 11 140 101 227 2.24e-15 76.6
MS.gene005418.t1 AT5G02320 37.273 110 66 3 6 115 120 226 2.39e-15 77.0
MS.gene005418.t1 AT5G02320 35.849 106 57 3 9 110 72 170 2.03e-13 71.2
MS.gene005418.t1 AT5G02320 37.273 110 66 3 6 115 120 226 2.39e-15 77.0
MS.gene005418.t1 AT5G02320 35.849 106 57 3 9 110 72 170 2.03e-13 71.2
MS.gene005418.t1 AT1G69560 37.895 95 57 2 17 111 126 218 2.41e-15 76.3
MS.gene005418.t1 AT4G00540 37.313 134 73 6 11 140 99 225 2.42e-15 76.6
MS.gene005418.t1 AT4G32730 37.273 110 66 3 6 115 80 186 4.60e-15 76.3
MS.gene005418.t1 AT4G32730 35.514 107 57 3 9 110 31 130 3.35e-13 70.9
MS.gene005418.t1 AT4G32730 37.273 110 66 3 6 115 80 186 5.98e-15 76.3
MS.gene005418.t1 AT4G32730 35.514 107 57 3 9 110 31 130 4.38e-13 70.5
MS.gene005418.t1 AT4G32730 37.273 110 66 3 6 115 80 186 5.98e-15 76.3
MS.gene005418.t1 AT4G32730 35.514 107 57 3 9 110 31 130 4.38e-13 70.5
MS.gene005418.t1 AT4G32730 37.273 110 66 3 6 115 80 186 5.98e-15 76.3
MS.gene005418.t1 AT4G32730 35.514 107 57 3 9 110 31 130 4.38e-13 70.5
MS.gene005418.t1 AT4G32730 37.273 110 66 3 6 115 80 186 5.98e-15 76.3
MS.gene005418.t1 AT4G32730 35.514 107 57 3 9 110 31 130 4.38e-13 70.5
MS.gene005418.t1 AT1G73410 38.318 107 64 2 17 123 9 113 6.70e-15 72.8
MS.gene005418.t1 AT1G73410 38.318 107 64 2 17 123 9 113 7.06e-15 73.6
MS.gene005418.t1 AT1G66380 45.333 75 39 2 44 117 7 80 1.07e-14 69.7
MS.gene005418.t1 AT1G66380 44.118 68 37 1 7 74 4 70 2.26e-14 68.9
MS.gene005418.t1 AT3G29020 38.462 104 59 3 17 117 68 169 2.80e-14 71.6
MS.gene005418.t1 AT3G29020 38.462 104 59 3 17 117 70 171 4.67e-14 72.0
MS.gene005418.t1 AT5G11510 33.636 110 70 3 6 115 74 180 6.64e-14 72.8
MS.gene005418.t1 AT5G11510 35.294 102 64 2 9 110 25 124 1.10e-12 69.3
MS.gene005418.t1 AT1G14350 35.398 113 71 2 7 119 18 128 6.66e-14 72.4
MS.gene005418.t1 AT1G14350 35.398 113 71 2 7 119 18 128 6.66e-14 72.4
MS.gene005418.t1 AT5G11510 33.636 110 70 3 6 115 74 180 6.67e-14 72.8
MS.gene005418.t1 AT5G11510 35.294 102 64 2 9 110 25 124 1.17e-12 68.9
MS.gene005418.t1 AT5G11510 33.636 110 70 3 6 115 74 180 6.67e-14 72.8
MS.gene005418.t1 AT5G11510 35.294 102 64 2 9 110 25 124 1.17e-12 68.9
MS.gene005418.t1 AT5G11510 33.636 110 70 3 6 115 74 180 6.67e-14 72.8
MS.gene005418.t1 AT5G11510 35.294 102 64 2 9 110 25 124 1.17e-12 68.9
MS.gene005418.t1 AT5G11510 33.636 110 70 3 6 115 74 180 7.13e-14 72.8
MS.gene005418.t1 AT5G11510 35.294 102 64 2 9 110 25 124 1.36e-12 68.9
MS.gene005418.t1 AT2G02820 34.513 113 72 2 7 119 23 133 2.17e-13 70.9
MS.gene005418.t1 AT2G02820 34.513 113 72 2 7 119 23 133 2.28e-13 70.9
MS.gene005418.t1 AT5G40430 37.168 113 64 4 7 115 43 152 3.07e-13 68.9
MS.gene005418.t1 AT2G02820 36.893 103 63 2 17 119 33 133 4.65e-13 69.3
MS.gene005418.t1 AT1G22640 51.515 66 30 2 59 123 2 66 1.98e-12 65.5
MS.gene005418.t1 AT3G18100 39.604 101 52 4 12 109 384 478 5.06e-12 67.0
MS.gene005418.t1 AT5G39700 37.864 103 62 2 9 111 51 151 5.09e-12 64.3
MS.gene005418.t1 AT3G18100 39.604 101 52 4 12 109 497 591 5.21e-12 67.0
MS.gene005418.t1 AT3G18100 39.604 101 52 4 12 109 332 426 5.30e-12 67.0
MS.gene005418.t1 AT3G18100 39.604 101 52 4 12 109 545 639 5.76e-12 67.0

Find 68 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTGAAAACTGCTTATT+TGG 0.104393 1.1:-63542027 None:intergenic
ACATAATGAATCCGGAATTT+TGG 0.151632 1.1:+63542321 MS.gene005418:CDS
CAGATACCAGAAGTTAAATT+TGG 0.178249 1.1:+63541970 MS.gene005418:CDS
TGATACCTCCTTCCAATTTC+CGG 0.211449 1.1:-63541440 None:intergenic
CATCGTTGATTACTAATAAA+AGG 0.212481 1.1:+63541347 MS.gene005418:CDS
CTAAGTTTGGTGAGTTTAAA+TGG 0.215221 1.1:+63541587 MS.gene005418:CDS
GGAACCCTTATACAGATATT+TGG 0.236892 1.1:+63542568 MS.gene005418:CDS
TCAAACCAAATATCTGTATA+AGG 0.245076 1.1:-63542573 None:intergenic
CTACTTCAACATTGATTGAT+AGG 0.294398 1.1:+63542091 MS.gene005418:CDS
AAAGTTCTTGATGTCATTAT+CGG 0.301665 1.1:-63541818 None:intergenic
CCTTTGGAGAACGATGAAAA+AGG 0.312790 1.1:+63542254 MS.gene005418:CDS
ATAATGACATCAAGAACTTT+TGG 0.313765 1.1:+63541821 MS.gene005418:CDS
CATTGTCATGCAAGTGTCTA+AGG 0.322693 1.1:-63542420 None:intergenic
TTTGAGTTATGTTCTAAGTT+TGG 0.324176 1.1:+63541574 MS.gene005418:CDS
ACCAGTTCCATTATGTTGTC+AGG 0.338387 1.1:-63541889 None:intergenic
AACGCGTCATTCCAAAATTC+CGG 0.348622 1.1:-63542332 None:intergenic
ATGTCATTATCGGTTCTTCC+AGG 0.362890 1.1:-63541808 None:intergenic
TATTTGAAAACTGCTTATTT+GGG 0.371336 1.1:-63542026 None:intergenic
TGATTTCCAAATTTAACTTC+TGG 0.372019 1.1:-63541976 None:intergenic
TTGATGAAAGTCAGGTCATT+TGG 0.399796 1.1:+63542540 MS.gene005418:CDS
ACCCTTCCCTGACAACATAA+TGG 0.401390 1.1:+63541882 MS.gene005418:CDS
CAAACCAAATATCTGTATAA+GGG 0.421526 1.1:-63542572 None:intergenic
TCTTCTTCTTCTTTACTAAA+CGG 0.425038 1.1:-63541544 None:intergenic
CTGGAAGAAGGCAATTGCTT+TGG 0.426159 1.1:+63542508 MS.gene005418:CDS
AAGGCATCATTAAAATCATA+TGG 0.427844 1.1:-63542401 None:intergenic
GCCTCCACTCCCACCACCTA+TGG 0.431643 1.1:+63542454 MS.gene005418:CDS
CCCTGACAACATAATGGAAC+TGG 0.441688 1.1:+63541888 MS.gene005418:CDS
GAAGAAGGCAATTGCTTTGG+CGG 0.441719 1.1:+63542511 MS.gene005418:CDS
AAGTCAGGTCATTTGGTTTG+AGG 0.449343 1.1:+63542547 MS.gene005418:CDS
AAATATGTTCTTCAATAATG+TGG 0.453078 1.1:+63542044 MS.gene005418:CDS
GTCTCCATAGGTGGTGGGAG+TGG 0.455161 1.1:-63542458 None:intergenic
GGAAGAAGGGAAGAAGCCTT+TGG 0.456662 1.1:+63542238 MS.gene005418:CDS
GGTTGAAGAAAGGAACATTA+TGG 0.458991 1.1:+63541368 MS.gene005418:CDS
AACGGACCCTTCTTTACATC+AGG 0.460974 1.1:-63541526 None:intergenic
AGATGTCAGAGATAAATAAC+TGG 0.463955 1.1:+63542489 MS.gene005418:CDS
TCCATCGATTTCAGGGAAGA+AGG 0.482710 1.1:+63542224 MS.gene005418:intron
AACATAATGGAACTGGTTGA+TGG 0.486232 1.1:+63541895 MS.gene005418:CDS
TCTACGACCTGATGTAAAGA+AGG 0.489579 1.1:+63541519 MS.gene005418:CDS
TCCATTATGTTGTCAGGGAA+GGG 0.491147 1.1:-63541883 None:intergenic
TGAGTTTAAATGGTCTAAGA+TGG 0.491679 1.1:+63541597 MS.gene005418:CDS
TTCCATTATGTTGTCAGGGA+AGG 0.494749 1.1:-63541884 None:intergenic
TTATTAGTAATCAACGATGA+AGG 0.498940 1.1:-63541343 None:intergenic
ACATGACGACATAATGAATC+CGG 0.500403 1.1:+63542313 MS.gene005418:CDS
GGAAGGTGTTGATGAAAGTC+AGG 0.502885 1.1:+63542532 MS.gene005418:CDS
GAGTATTATACCATCTAAAA+CGG 0.511421 1.1:-63541498 None:intergenic
GATGGTTTGAAGAGTAGTAA+TGG 0.516640 1.1:+63541913 MS.gene005418:CDS
ACTAATAAAAGGTTGAAGAA+AGG 0.518243 1.1:+63541358 MS.gene005418:CDS
AAGGCAATTGCTTTGGCGGA+AGG 0.520845 1.1:+63542515 MS.gene005418:CDS
AATATGTTCTTCAATAATGT+GGG 0.531232 1.1:+63542045 MS.gene005418:CDS
AGAGATAAATAACTGGAAGA+AGG 0.539212 1.1:+63542496 MS.gene005418:CDS
GCTTCAACATCATTCTCCAA+AGG 0.548870 1.1:-63542284 None:intergenic
GATTCATTATGTCGTCATGT+AGG 0.551510 1.1:-63542310 None:intergenic
TGTTGAGTCTCCATAGGTGG+TGG 0.552970 1.1:-63542464 None:intergenic
CCAGTTCCATTATGTTGTCA+GGG 0.557866 1.1:-63541888 None:intergenic
CCATCGATTTCAGGGAAGAA+GGG 0.560112 1.1:+63542225 MS.gene005418:intron
TCCATAGGTGGTGGGAGTGG+AGG 0.563890 1.1:-63542455 None:intergenic
ACATGGAACCGGAAATTGGA+AGG 0.586011 1.1:+63541432 MS.gene005418:CDS
GTTCAACACATTAGTCAATG+AGG 0.597425 1.1:+63542352 MS.gene005418:CDS
ATGGTCTAAGATGGCTCTCG+AGG 0.613037 1.1:+63541606 MS.gene005418:CDS
GTTGAGTCTCCATAGGTGGT+GGG 0.628088 1.1:-63542463 None:intergenic
CTACGACCTGATGTAAAGAA+GGG 0.647996 1.1:+63541520 MS.gene005418:CDS
ATCTGATGTTGAGTCTCCAT+AGG 0.660577 1.1:-63542470 None:intergenic
GAAGGAGGTATCAAAGAACA+CGG 0.666684 1.1:+63541450 MS.gene005418:CDS
AAAAGAAAACATGAAAGACA+TGG 0.669709 1.1:+63541853 MS.gene005418:CDS
TGATGTTGAGTCTCCATAGG+TGG 0.669883 1.1:-63542467 None:intergenic
TGGAACCGGAAATTGGAAGG+AGG 0.696666 1.1:+63541435 MS.gene005418:CDS
AACACGGGACTTGCACACTG+TGG 0.714946 1.1:+63541466 MS.gene005418:CDS
AAGGAGGTATCAAAGAACAC+GGG 0.739276 1.1:+63541451 MS.gene005418:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CGGAAAATTATTATTAATAT+CGG - chr1.1:63542173-63542192 None:intergenic 15.0%
!! AAATATGTTCTTCAATAATG+TGG + chr1.1:63542044-63542063 MS.gene005418:CDS 20.0%
!! AATATGTTCTTCAATAATGT+GGG + chr1.1:63542045-63542064 MS.gene005418:CDS 20.0%
!! ATATTTGAAAACTGCTTATT+TGG - chr1.1:63542030-63542049 None:intergenic 20.0%
!! ATTAAAATTAATGACACAAG+TGG - chr1.1:63541761-63541780 None:intergenic 20.0%
!! GATGTATATATAAAAGAGAA+TGG - chr1.1:63542139-63542158 None:intergenic 20.0%
!! TATTTGAAAACTGCTTATTT+GGG - chr1.1:63542029-63542048 None:intergenic 20.0%
! AAAAGAAAACATGAAAGACA+TGG + chr1.1:63541853-63541872 MS.gene005418:CDS 25.0%
! AAAGCATATGTTGAAAAACA+TGG + chr1.1:63541415-63541434 MS.gene005418:CDS 25.0%
! AAAGTTCTTGATGTCATTAT+CGG - chr1.1:63541821-63541840 None:intergenic 25.0%
! AACATGTGATCTAATGAATA+TGG - chr1.1:63541696-63541715 None:intergenic 25.0%
! ACTAATAAAAGGTTGAAGAA+AGG + chr1.1:63541358-63541377 MS.gene005418:CDS 25.0%
! CAAACCAAATATCTGTATAA+GGG - chr1.1:63542575-63542594 None:intergenic 25.0%
! GAGTATTATACCATCTAAAA+CGG - chr1.1:63541501-63541520 None:intergenic 25.0%
! TCAAACCAAATATCTGTATA+AGG - chr1.1:63542576-63542595 None:intergenic 25.0%
! TCTTCTTCTTCTTTACTAAA+CGG - chr1.1:63541547-63541566 None:intergenic 25.0%
! TTATTAGTAATCAACGATGA+AGG - chr1.1:63541346-63541365 None:intergenic 25.0%
!! AAGGCATCATTAAAATCATA+TGG - chr1.1:63542404-63542423 None:intergenic 25.0%
!! ATAATGACATCAAGAACTTT+TGG + chr1.1:63541821-63541840 MS.gene005418:CDS 25.0%
!! CATCGTTGATTACTAATAAA+AGG + chr1.1:63541347-63541366 MS.gene005418:CDS 25.0%
!! GTAGTAATGGAAAAAGAATA+AGG + chr1.1:63541926-63541945 MS.gene005418:CDS 25.0%
!! TGATTTCCAAATTTAACTTC+TGG - chr1.1:63541979-63541998 None:intergenic 25.0%
!! TTTGAGTTATGTTCTAAGTT+TGG + chr1.1:63541574-63541593 MS.gene005418:CDS 25.0%
AGAGATAAATAACTGGAAGA+AGG + chr1.1:63542496-63542515 MS.gene005418:CDS 30.0%
AGATGTCAGAGATAAATAAC+TGG + chr1.1:63542489-63542508 MS.gene005418:CDS 30.0%
CAGATACCAGAAGTTAAATT+TGG + chr1.1:63541970-63541989 MS.gene005418:CDS 30.0%
TATGTTGAAAAACATGGAAC+CGG + chr1.1:63541421-63541440 MS.gene005418:CDS 30.0%
TGAGTTTAAATGGTCTAAGA+TGG + chr1.1:63541597-63541616 MS.gene005418:CDS 30.0%
! ACATAATGAATCCGGAATTT+TGG + chr1.1:63542321-63542340 MS.gene005418:CDS 30.0%
! CTAAGTTTGGTGAGTTTAAA+TGG + chr1.1:63541587-63541606 MS.gene005418:CDS 30.0%
! CTACTTCAACATTGATTGAT+AGG + chr1.1:63542091-63542110 MS.gene005418:CDS 30.0%
!! AATTACTTCCATCGATTTCA+GGG + chr1.1:63542217-63542236 MS.gene005418:intron 30.0%
AAAAACATGGAACCGGAAAT+TGG + chr1.1:63541428-63541447 MS.gene005418:CDS 35.0%
ACATGACGACATAATGAATC+CGG + chr1.1:63542313-63542332 MS.gene005418:CDS 35.0%
GATGGTTTGAAGAGTAGTAA+TGG + chr1.1:63541913-63541932 MS.gene005418:CDS 35.0%
GATTCATTATGTCGTCATGT+AGG - chr1.1:63542313-63542332 None:intergenic 35.0%
GGAACCCTTATACAGATATT+TGG + chr1.1:63542568-63542587 MS.gene005418:CDS 35.0%
GGTTGAAGAAAGGAACATTA+TGG + chr1.1:63541368-63541387 MS.gene005418:CDS 35.0%
GTTCAACACATTAGTCAATG+AGG + chr1.1:63542352-63542371 MS.gene005418:CDS 35.0%
TTGATGAAAGTCAGGTCATT+TGG + chr1.1:63542540-63542559 MS.gene005418:CDS 35.0%
! AACATAATGGAACTGGTTGA+TGG + chr1.1:63541895-63541914 MS.gene005418:CDS 35.0%
! CTTTGGAGAACGATGAAAAA+GGG + chr1.1:63542255-63542274 MS.gene005418:CDS 35.0%
! TTCTTTTTGTTACAGATGCC+TGG + chr1.1:63541790-63541809 MS.gene005418:intron 35.0%
!! CAATTACTTCCATCGATTTC+AGG + chr1.1:63542216-63542235 MS.gene005418:intron 35.0%
AACGCGTCATTCCAAAATTC+CGG - chr1.1:63542335-63542354 None:intergenic 40.0%
AATATGGCTGCAGTTGTAGA+AGG - chr1.1:63541680-63541699 None:intergenic 40.0%
ACCAGTTCCATTATGTTGTC+AGG - chr1.1:63541892-63541911 None:intergenic 40.0%
ATCTGATGTTGAGTCTCCAT+AGG - chr1.1:63542473-63542492 None:intergenic 40.0%
CATTGTCATGCAAGTGTCTA+AGG - chr1.1:63542423-63542442 None:intergenic 40.0%
CCAGTTCCATTATGTTGTCA+GGG - chr1.1:63541891-63541910 None:intergenic 40.0%
CTACGACCTGATGTAAAGAA+GGG + chr1.1:63541520-63541539 MS.gene005418:CDS 40.0%
GCTTCAACATCATTCTCCAA+AGG - chr1.1:63542287-63542306 None:intergenic 40.0%
TCCATTATGTTGTCAGGGAA+GGG - chr1.1:63541886-63541905 None:intergenic 40.0%
TCTACGACCTGATGTAAAGA+AGG + chr1.1:63541519-63541538 MS.gene005418:CDS 40.0%
TGAAAAAGGGAAGAAGCCTT+TGG + chr1.1:63542268-63542287 MS.gene005418:CDS 40.0%
TGATACCTCCTTCCAATTTC+CGG - chr1.1:63541443-63541462 None:intergenic 40.0%
TTCCATTATGTTGTCAGGGA+AGG - chr1.1:63541887-63541906 None:intergenic 40.0%
! CCTTTGGAGAACGATGAAAA+AGG + chr1.1:63542254-63542273 MS.gene005418:CDS 40.0%
!! AAGGAGGTATCAAAGAACAC+GGG + chr1.1:63541451-63541470 MS.gene005418:CDS 40.0%
!! AAGTCAGGTCATTTGGTTTG+AGG + chr1.1:63542547-63542566 MS.gene005418:CDS 40.0%
!! ATGTCATTATCGGTTCTTCC+AGG - chr1.1:63541811-63541830 None:intergenic 40.0%
!! CCTTTTTCATCGTTCTCCAA+AGG - chr1.1:63542257-63542276 None:intergenic 40.0%
!! GAAGGAGGTATCAAAGAACA+CGG + chr1.1:63541450-63541469 MS.gene005418:CDS 40.0%
!!! GAAGAAGTTGCCGTTTTAGA+TGG + chr1.1:63541488-63541507 MS.gene005418:CDS 40.0%
AACGGACCCTTCTTTACATC+AGG - chr1.1:63541529-63541548 None:intergenic 45.0%
ACATGGAACCGGAAATTGGA+AGG + chr1.1:63541432-63541451 MS.gene005418:CDS 45.0%
ACCCTTCCCTGACAACATAA+TGG + chr1.1:63541882-63541901 MS.gene005418:CDS 45.0%
CTGGAAGAAGGCAATTGCTT+TGG + chr1.1:63542508-63542527 MS.gene005418:CDS 45.0%
GAAGAAGGCAATTGCTTTGG+CGG + chr1.1:63542511-63542530 MS.gene005418:CDS 45.0%
TGATGTTGAGTCTCCATAGG+TGG - chr1.1:63542470-63542489 None:intergenic 45.0%
! CCCTGACAACATAATGGAAC+TGG + chr1.1:63541888-63541907 MS.gene005418:CDS 45.0%
!! CCATCGATTTCAGGGAAGAA+GGG + chr1.1:63542225-63542244 MS.gene005418:intron 45.0%
!! GGAAGGTGTTGATGAAAGTC+AGG + chr1.1:63542532-63542551 MS.gene005418:CDS 45.0%
!! TCCATCGATTTCAGGGAAGA+AGG + chr1.1:63542224-63542243 MS.gene005418:intron 45.0%
!!! ATTTAACATATAAATTTTTA+CGG - chr1.1:63542193-63542212 None:intergenic 5.0%
AAGGCAATTGCTTTGGCGGA+AGG + chr1.1:63542515-63542534 MS.gene005418:CDS 50.0%
CCCTTCTTCCCTGAAATCGA+TGG - chr1.1:63542228-63542247 None:intergenic 50.0%
GGAAGAAGGGAAGAAGCCTT+TGG + chr1.1:63542238-63542257 MS.gene005418:CDS 50.0%
GTTGAGTCTCCATAGGTGGT+GGG - chr1.1:63542466-63542485 None:intergenic 50.0%
TGGAACCGGAAATTGGAAGG+AGG + chr1.1:63541435-63541454 MS.gene005418:CDS 50.0%
TGTTGAGTCTCCATAGGTGG+TGG - chr1.1:63542467-63542486 None:intergenic 50.0%
! ATGGTCTAAGATGGCTCTCG+AGG + chr1.1:63541606-63541625 MS.gene005418:CDS 50.0%
AACACGGGACTTGCACACTG+TGG + chr1.1:63541466-63541485 MS.gene005418:CDS 55.0%
!! GTCTCCATAGGTGGTGGGAG+TGG - chr1.1:63542461-63542480 None:intergenic 60.0%
!! TCCATAGGTGGTGGGAGTGG+AGG - chr1.1:63542458-63542477 None:intergenic 60.0%
GCCTCCACTCCCACCACCTA+TGG + chr1.1:63542454-63542473 MS.gene005418:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 63541340 63542595 63541340 ID=MS.gene005418
chr1.1 mRNA 63541340 63542595 63541340 ID=MS.gene005418.t1;Parent=MS.gene005418
chr1.1 exon 63541340 63541627 63541340 ID=MS.gene005418.t1.exon1;Parent=MS.gene005418.t1
chr1.1 CDS 63541340 63541627 63541340 ID=cds.MS.gene005418.t1;Parent=MS.gene005418.t1
chr1.1 exon 63541805 63542112 63541805 ID=MS.gene005418.t1.exon2;Parent=MS.gene005418.t1
chr1.1 CDS 63541805 63542112 63541805 ID=cds.MS.gene005418.t1;Parent=MS.gene005418.t1
chr1.1 exon 63542238 63542595 63542238 ID=MS.gene005418.t1.exon3;Parent=MS.gene005418.t1
chr1.1 CDS 63542238 63542595 63542238 ID=cds.MS.gene005418.t1;Parent=MS.gene005418.t1
Gene Sequence

>MS.gene005418

ATGCCTTCATCGTTGATTACTAATAAAAGGTTGAAGAAAGGAACATTATGGTCAGAAGAAGAAGATGAAATATTAAAAGCATATGTTGAAAAACATGGAACCGGAAATTGGAAGGAGGTATCAAAGAACACGGGACTTGCACACTGTGGAAGAAGTTGCCGTTTTAGATGGTATAATACTCTACGACCTGATGTAAAGAAGGGTCCGTTTAGTAAAGAAGAAGAAGAAAAATTCTTTGAGTTATGTTCTAAGTTTGGTGAGTTTAAATGGTCTAAGATGGCTCTCGAGGTATATTTTTGTTCATGCTTTACTTCTTTTCTTTGAAATATTTATCTGTCCTTCTACAACTGCAGCCATATTCATTAGATCACATGTTGTGCAATTTAATTAAATACAATACTATAATATAATATATTTACCACTTGTGTCATTAATTTTAATTTGTATTCATTCTTTTTGTTACAGATGCCTGGAAGAACCGATAATGACATCAAGAACTTTTGGAATGCAAGAAAAAGAAAACATGAAAGACATGGCTTGTCACCCTTCCCTGACAACATAATGGAACTGGTTGATGGTTTGAAGAGTAGTAATGGAAAAAGAATAAGGAATTCACAAGAAAACAAATTTCAGATACCAGAAGTTAAATTTGGAAATCAAATTCTGCATACAAACTTGTCTGATCTCCCAAATAAGCAGTTTTCAAATATGTTCTTCAATAATGTGGGAAGTACTTCTACAAGCAATCATACTACTTCAACATTGATTGATAGGTGAGTAGATTATGCAATGCATGCCATTCTCTTTTATATATACATCTATTTGTTACGCCGATATTAATAATAATTTTCCGTAAAAATTTATATGTTAAATTTACAATTACTTCCATCGATTTCAGGGAAGAAGGGAAGAAGCCTTTGGAGAACGATGAAAAAGGGAAGAAGCCTTTGGAGAATGATGTTGAAGCAAACCTACATGACGACATAATGAATCCGGAATTTTGGAATGACGCGTTCAACACATTAGTCAATGAGGTTTACAATGACTTGCATGACAAGCTTCCATATGATTTTAATGATGCCTTAGACACTTGCATGACAATGCAATCAGATCTGCCTCCACTCCCACCACCTATGGAGACTCAACATCAGATGTCAGAGATAAATAACTGGAAGAAGGCAATTGCTTTGGCGGAAGGTGTTGATGAAAGTCAGGTCATTTGGTTTGAGGAACCCTTATACAGATATTTGGTTTGA
Protein sequence

>MS.gene005418.t1

MPSSLITNKRLKKGTLWSEEEDEILKAYVEKHGTGNWKEVSKNTGLAHCGRSCRFRWYNTLRPDVKKGPFSKEEEEKFFELCSKFGEFKWSKMALEMPGRTDNDIKNFWNARKRKHERHGLSPFPDNIMELVDGLKSSNGKRIRNSQENKFQIPEVKFGNQILHTNLSDLPNKQFSNMFFNNVGSTSTSNHTTSTLIDREEGKKPLENDEKGKKPLENDVEANLHDDIMNPEFWNDAFNTLVNEVYNDLHDKLPYDFNDALDTCMTMQSDLPPLPPPMETQHQMSEINNWKKAIALAEGVDESQVIWFEEPLYRYLV